NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F088033

Metagenome Family F088033

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F088033
Family Type Metagenome
Number of Sequences 109
Average Sequence Length 38 residues
Representative Sequence VSFELPGGNGRDSGIAGWENMGMGFKFQMGMGMGWEWE
Number of Associated Samples 19
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 90.83 %
% of genes from short scaffolds (< 2000 bps) 87.16 %
Associated GOLD sequencing projects 17
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (93.578 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Annelida → Digestive System → Unclassified → Unclassified → Marine Gutless Worms
(89.908 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Animal → Animal proximal gut
(100.000 % of family members)



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Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
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IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.
1Ga0049116_100160122
2JGI26667J51740_100251401
3Ga0049105_11591351
4Ga0049105_12680491
5Ga0049107_101671393
6Ga0126333_10334533
7Ga0126333_10760322
8Ga0126333_10820831
9Ga0126333_10874991
10Ga0126333_11548402
11Ga0126333_11676861
12Ga0126333_11824171
13Ga0126333_11955721
14Ga0126333_12749302
15Ga0126326_12098601
16Ga0126326_12196951
17Ga0126326_12275531
18Ga0126326_12376412
19Ga0126326_12442771
20Ga0126326_12927662
21Ga0126332_100148034
22Ga0126332_100687171
23Ga0126332_100759361
24Ga0126332_100810831
25Ga0126332_100828763
26Ga0126332_100891011
27Ga0126332_101145691
28Ga0126332_101375011
29Ga0126332_101405411
30Ga0126332_101544434
31Ga0126332_101736541
32Ga0126332_102097211
33Ga0126332_102309271
34Ga0126332_102401381
35Ga0126332_103707271
36Ga0126332_103756351
37Ga0126334_100366451
38Ga0126334_100527211
39Ga0126334_100651401
40Ga0126334_101421781
41Ga0126334_102178201
42Ga0126334_102290801
43Ga0126334_102658241
44Ga0126334_103285851
45Ga0126334_104035241
46Ga0126334_104261671
47Ga0126325_101447961
48Ga0126325_101593771
49Ga0126325_101658971
50Ga0126325_101820201
51Ga0126325_101858632
52Ga0126325_102205181
53Ga0126325_102382571
54Ga0126325_102725192
55Ga0126325_103774733
56Ga0126331_10316553
57Ga0126331_10596271
58Ga0126331_11118492
59Ga0126331_11234831
60Ga0126331_11809303
61Ga0126331_12026031
62Ga0126331_12349421
63Ga0126331_13354531
64Ga0136654_10922135
65Ga0136654_11375331
66Ga0136654_11411482
67Ga0136654_11519512
68Ga0136654_11678251
69Ga0136654_11878681
70Ga0136654_11985241
71Ga0136654_12029541
72Ga0136654_12383271
73Ga0136654_12580201
74Ga0126328_100516912
75Ga0126328_100807444
76Ga0126328_102474881
77Ga0126328_102765491
78Ga0126328_103405061
79Ga0126330_100067161
80Ga0126330_100346791
81Ga0126330_100902431
82Ga0126330_101057561
83Ga0126330_101106351
84Ga0126330_101378693
85Ga0126330_101480601
86Ga0126330_102373711
87Ga0126330_103935342
88Ga0126327_100654892
89Ga0126327_101479181
90Ga0126327_102182832
91Ga0126327_103188841
92Ga0126327_103638791
93Ga0126329_100425903
94Ga0126329_100883061
95Ga0126329_101176791
96Ga0126329_101495082
97Ga0126329_102759861
98Ga0126329_102934751
99Ga0126329_103000721
100Ga0126329_103288471
101Ga0126329_103413661
102Ga0126329_104044751
103Ga0126335_11366411
104Ga0209562_10268274
105Ga0209562_12732383
106Ga0209255_13064252
107Ga0209255_13568821
108Ga0209255_13873381
109Ga0209789_101312181
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 13.16%    Coil/Unstructured: 86.84%
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Variant

5101520253035VSFELPGGNGRDSGIAGWENMGMGFKFQMGMGMGWEWESequenceα-helicesβ-strandsCoilSS Conf. score
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Gene Neighborhood

Neighboring Pfam domains




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Phylogeny

NCBI Taxonomy

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Visualization
All Organisms
Unclassified
6.4%93.6%
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Associated Scaffolds





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Environmental Properties

Associated Habitat Types

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Visualization
Marine Gutless Worms Symbiont
Marine Gutless Worms Symbiont
Marine Gutless Worms
9.2%89.9%
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Associated Samples


Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0049116_1001601223300003786Marine Gutless Worms SymbiontMVSFVFPGENGRDLGIAGWEHMGMGMGFKFQVGMGMGWEWE*
JGI26667J51740_1002514013300003906Marine Gutless Worms SymbiontDVSFELPDGNGMDLENAEWKNMGMRFKFQMGIGIGWEWE*
Ga0049105_115913513300004630Marine Gutless Worms SymbiontDISFELPDGNGRYLEIAELENMGMGFKFQMGMAMEWEWE*
Ga0049105_126804913300004630Marine Gutless Worms SymbiontLRVSFELPDENGRDLGIAGWENMGMRFKFKMGMGMGWEWE*
Ga0049107_1016713933300004632Marine Gutless Worms SymbiontLFVRSDVSFELPDGNGNGRDLGIAGWEKMGMGFKFQMGMGVGWEWE*
Ga0126333_103345333300010290Marine Gutless WormsELPGGNGRDSGIAGWENMGMGFKFQMGMGMGWEWE*
Ga0126333_107603223300010290Marine Gutless WormsHDVSFELPDGNGRDSGIAGWENMGMEFKLQMGMGMGWEWEWE*
Ga0126333_108208313300010290Marine Gutless WormsFELPGGNGRDSGIAGWENMGMGFKFQMGMGMKSLK*
Ga0126333_108749913300010290Marine Gutless WormsVSFELPDGNGRDSGIAGWENMGMGFKFQMGMGMGWKWE*
Ga0126333_115484023300010290Marine Gutless WormsLPGGNGRDSGIAGWENMGMGFKFQMGMGVGWEWE*
Ga0126333_116768613300010290Marine Gutless WormsLPDGNGRDSGIAGWENMGMGFKFQMGMGMGWEWELSH*
Ga0126333_118241713300010290Marine Gutless WormsSFELPGGNGRDSGIAGWENMGMGFKFQTGMGMGWEWE*
Ga0126333_119557213300010290Marine Gutless WormsHDVSFELPDGNGRDSGIAGWENMGMEFKLQMGMGMGWEWE*
Ga0126333_127493023300010290Marine Gutless WormsELPGGNGRDSGIAGWENMGMGFKFQTGMGMGWEWE*
Ga0126326_120986013300010292Marine Gutless WormsHDVSFELPGGNGRDSGIAGWENMGMGFKYQMGMGMGWE*
Ga0126326_121969513300010292Marine Gutless WormsVNVYSNVSFELPGGNGRESGIAGWENMGMGFKFQTGMRMGWEWE*
Ga0126326_122755313300010292Marine Gutless WormsHDVSFELPGGNGRDSGIAGWENMGMGFKFQMGMGMGWEWE*
Ga0126326_123764123300010292Marine Gutless WormsHDVSFELPGGNERDSGIAGWENMEMGFKFQMGMGMGWEWE*
Ga0126326_124427713300010292Marine Gutless WormsFELPGGNGRDSGIAGWENMGMGFKFQMGMRMGWERE*
Ga0126326_129276623300010292Marine Gutless WormsSFELPGVNGRDSGIAVWENMGMGFKFQMGMGMGWEWE*
Ga0126332_1001480343300010294Marine Gutless WormsSFELPGGNGRDSGIAGWENMGMGFKFQTGMGWEWE*
Ga0126332_1006871713300010294Marine Gutless WormsMMSFFELPGGNGRDSGIAGWENMGMGFKFHMGMGMGWEWE*
Ga0126332_1007593613300010294Marine Gutless WormsSFELPGGNERDSGIAGWENMGMGFKFQMGMGWERE*
Ga0126332_1008108313300010294Marine Gutless WormsDVSFELPGGNGRDSGIAGWENMGMGFKFQMGMGMGWEWE*
Ga0126332_1008287633300010294Marine Gutless WormsFELPGGNGRDSGIAGWENMGMGFKFQMGMGMGWEWE*
Ga0126332_1008910113300010294Marine Gutless WormsLPDGNGRDSGIAGWENMGMGFKFQMGMGMKSLKWEGIGTKN
Ga0126332_1011456913300010294Marine Gutless WormsSFELPGGNGRDLGIAGWENMGMGFKFQMGMGMGWEWE*
Ga0126332_1013750113300010294Marine Gutless WormsVSFELPGGNGRDSGIAGWENMGMRFKFQMGMGMGREWK*
Ga0126332_1014054113300010294Marine Gutless WormsDVSFELPGGNGRDSGIAGWENMGMGFKFQTGMGMEWE*
Ga0126332_1015444343300010294Marine Gutless WormsSFELPGGNGRDSGIAGWENMGMGFKFQMGMGMGWEWE*
Ga0126332_1017365413300010294Marine Gutless WormsLPGGNGRDSGIAGWENMGMGFKFQMGMGMGWEWE*
Ga0126332_1020972113300010294Marine Gutless WormsFELPGGNGRESGIDGWENMGMGFKFQMGMGMGWEW*
Ga0126332_1023092713300010294Marine Gutless WormsELPGGNGRDSGIAGWENMGMGFKFQMGMGVGWEWE*
Ga0126332_1024013813300010294Marine Gutless WormsHDVSFELPGGNGRDSGIAGWENMGMGFKFQMGMGKGWEWE*
Ga0126332_1037072713300010294Marine Gutless WormsLPGGNGRDSGIAGWENMGMGLKFQTGMGMGWEWE*
Ga0126332_1037563513300010294Marine Gutless WormsFELPGGNGRDSGIAGWENMGMGFKFQMGMGMGWEPE*
Ga0126334_1003664513300010295Marine Gutless WormsLPGRNGRDSGIAGWEDMGMGFKFQVGMEMGIKSLKWE
Ga0126334_1005272113300010295Marine Gutless WormsVSFELPGGNGRDSGIAGWENMGMGFKFQMGMGWERE*
Ga0126334_1006514013300010295Marine Gutless WormsFELPGGNGRDSGIAGWENMGMGFKFQKGMGMGWEWE*
Ga0126334_1014217813300010295Marine Gutless WormsFELPGGNGRDSGIAGWENTGMGFKFQMGMGWEWE*
Ga0126334_1021782013300010295Marine Gutless WormsDVSFELPGGNGRDSGIAGWENMGMGFKFLTGMGMGWE*
Ga0126334_1022908013300010295Marine Gutless WormsVSFELPGGNGRDSRIAGWENMGMGFKFQMGMGWEWE*
Ga0126334_1026582413300010295Marine Gutless WormsFELPGGNGRDSGIAGWENMGMGFKFQTGVGMGWEWE*
Ga0126334_1032858513300010295Marine Gutless WormsMMSHFELPGGNGMDSGIAGWENMGMGFKFQTGMGM
Ga0126334_1040352413300010295Marine Gutless WormsAYHDVSFELPGGNGRDSGIAGWENMGMGFKFQMEMGWEWE*
Ga0126334_1042616713300010295Marine Gutless WormsSFALPGGNGRDSGIAGWENMGMGFKFQMGMGMGWGWE*
Ga0126325_1014479613300010298Marine Gutless WormsDVSFELPGGNGRDSGIAGWENMGMGFKFQTGMGIGWEWE*
Ga0126325_1015937713300010298Marine Gutless WormsHDVSFELPGGNGRDSGIAGWENMGMGFKFQMGMGKGWERE*
Ga0126325_1016589713300010298Marine Gutless WormsNVSFELPGGNGRDSGIAGWENMGMGFKFQVGMGWERE*
Ga0126325_1018202013300010298Marine Gutless WormsLPGGNERDSGIAGWENMGMGFKFQMGMGMGWEWE*
Ga0126325_1018586323300010298Marine Gutless WormsHDVSFELPGGNGRDSGIAGWENMGMGFKFQTGMGWEWE*
Ga0126325_1022051813300010298Marine Gutless WormsHDVSFELPGGNGRDSGIAGWENMGMGFKFQMRMGIGWEWE*
Ga0126325_1023825713300010298Marine Gutless WormsFELPGGNGRDSGIAEWENMGMGFKFQMGMGWEWE*
Ga0126325_1027251923300010298Marine Gutless WormsFPTFCAQHDVSFELPGGNGRDSGIAGWENMGMGFKFQIGMGMG*
Ga0126325_1037747333300010298Marine Gutless WormsSFELPDGNGRDSGIAGWENMGMGFKFQMGMGMGWEWE*
Ga0126331_103165533300010314Marine Gutless WormsVSFELPGGNGRDSGIAGWENMGMGFKFHMGMGMGWEWE*
Ga0126331_105962713300010314Marine Gutless WormsHDVSFELPGGNGRDSGIAGWENMGMGFKFQMGMGWE*
Ga0126331_111184923300010314Marine Gutless WormsSFELPGGNGRDSGIAGWENMGMGFKFQVGMGMGWEWE*
Ga0126331_112348313300010314Marine Gutless WormsFELPDGNGRDSGIAGWENMGMEFKLQMGMGMGWEWE*
Ga0126331_118093033300010314Marine Gutless WormsSFELPGGNGRDSGIDGWENMGMGFKFQMGMGMGWEWE*
Ga0126331_120260313300010314Marine Gutless WormsFELPGGNGRDSGIAGWENMGMGFKFQMGMGTGWEWE*
Ga0126331_123494213300010314Marine Gutless WormsVLFELPGGNGRDSGIAGWENMGMGFKFQMGMGWERE*
Ga0126331_133545313300010314Marine Gutless WormsDVSFELPDGNGRDSGIAGWENMGMGFKFQMGMGMGWEWK*
Ga0136654_109221353300010315Marine Gutless WormsHDVSFELPGGNGRDLGIAGWENMGMGFKFQTGMGMRWEWE*
Ga0136654_113753313300010315Marine Gutless WormsHDVSFELPGGNGRDSGIARWENMGMGIKFQMGMGMEWE*
Ga0136654_114114823300010315Marine Gutless WormsSFELPGGNGRDSGIAGWENMGMGFKFQMEMGWEWE*
Ga0136654_115195123300010315Marine Gutless WormsLQDGNGRDSGIAGWENMGMGFKFQMGMGMKSLKWEGI
Ga0136654_116782513300010315Marine Gutless WormsFELPGGNGRDSGIAGWENMGMGFKFEMGMGMKSLK*
Ga0136654_118786813300010315Marine Gutless WormsVSFELPGGNGRDSGIAGWENMGMGFKFQMGMGMGWEWE*
Ga0136654_119852413300010315Marine Gutless WormsMPSGNGRDSGIAGWENMGMGFKFQTAMEMGWEWE*
Ga0136654_120295413300010315Marine Gutless WormsQHDVSFELPGGNGRDSGIARWINVGMGFKFQMGMGMGWEWEGSH*
Ga0136654_123832713300010315Marine Gutless WormsFELSGGNGRDSGIAGWENMGMGFKFQMGMGMGWEWE*
Ga0136654_125802013300010315Marine Gutless WormsHDVSFELPGGNGRDSGIAGWENMGMGFKFQMGMAMGWEWE*
Ga0126328_1005169123300010377Marine Gutless WormsFELPGGNGRDSGIAGRENMGMGFKFQMGMGKGWEWE*
Ga0126328_1008074443300010377Marine Gutless WormsFELPGGNGRDSGIVGWENMGMGFKFQMGMEMGWERE*
Ga0126328_1024748813300010377Marine Gutless WormsVSFDLPGGNGRDSGIAGGENMGMGIKFQMGMGWEWE*
Ga0126328_1027654913300010377Marine Gutless WormsHDVSFELPGGNGRGSGIAGWENMRMGFKFQTGMGMGWEWE*
Ga0126328_1034050613300010377Marine Gutless WormsFELPGGNGTDLEIAGWENMGMGFKFQMGMGMGWE*
Ga0126330_1000671613300010378Marine Gutless WormsSMMSHLTRFNLPGGNGRDSGTDGWENMGMGFKFQMGMGWEWE*
Ga0126330_1003467913300010378Marine Gutless WormsFELPGGNGRDSGIAGWENMGMGLKFQTGMGMGWEWE*
Ga0126330_1009024313300010378Marine Gutless WormsELPGGNGRDSGIAGWENMGIGFKFQMGMGMGWEWECSH*
Ga0126330_1010575613300010378Marine Gutless WormsFELPGGNGRDSGIAGWENMGMGFKFQKGMAMGWEWE*
Ga0126330_1011063513300010378Marine Gutless WormsLPGGNGRDSGIAGWENMGMGFKFQTGMGMGWEWE*
Ga0126330_1013786933300010378Marine Gutless WormsVSFELPGGNGRDSGIAGWENMGMGFKFQTGMGMGWEWE*
Ga0126330_1014806013300010378Marine Gutless WormsFELPGGNGRDSGIAGWENMRMGFKFQMGMGWEWE*
Ga0126330_1023737113300010378Marine Gutless WormsVSFELPGGNGRDSGIAGWENMGMEFKFQMGMGMRWKWE*
Ga0126330_1039353423300010378Marine Gutless WormsSFELPGGNGRDSGITGWENMGMGFKFQMGMGWEWE*
Ga0126327_1006548923300011190Marine Gutless WormsSFELPGGNGRDSGIAGWENMGMGFKFQTGMGMGWERE*
Ga0126327_1014791813300011190Marine Gutless WormsHDVSFELPGGNGRDSGIAGWENMGMGFKFQMGMVMGWEWE*
Ga0126327_1021828323300011190Marine Gutless WormsHDVSFELPGGNGRDSGIAGWENMGMGFKFQMGMRMGWERE*
Ga0126327_1031888413300011190Marine Gutless WormsHDVSFELPGGNGRDSGIAGWENMGMGFKFQMGMGWERE*
Ga0126327_1036387913300011190Marine Gutless WormsELPGGNGRDSGIAGWENMGMGFKFQMGMGMGWERERSH*
Ga0126329_1004259033300012273Marine Gutless WormsVSFELPGGNGRDSGIAGWENMGMGFKFQMGMGWEWE*
Ga0126329_1008830613300012273Marine Gutless WormsHDVSFELPGGNGRDSGIAGWENMGMGFKFQVGMGMG*
Ga0126329_1011767913300012273Marine Gutless WormsHDVSFELPGGNGRDSGIAGWENMGMGFKFQMGMGWEWE*
Ga0126329_1014950823300012273Marine Gutless WormsLHDVSFELPGGNERDSGIAGWENMGMGFKFQMGMGMGWEWE*
Ga0126329_1027598613300012273Marine Gutless WormsHDVSFELPGGNGRDSGIAGWENMGMGFKFQMGMEMEWE*
Ga0126329_1029347513300012273Marine Gutless WormsELPGGNGRDSGIAGWENMGMGFKFQMGMGMGWEWV*
Ga0126329_1030007213300012273Marine Gutless WormsHDVSFELPGGNGRDSGIAGWENMGMGFKFQMGMGWERD*
Ga0126329_1032884713300012273Marine Gutless WormsHDVSFELPGGNGRDSGIAGWENMGMGFKFQMGMGVGWEWE*
Ga0126329_1034136613300012273Marine Gutless WormsFELPGGNGRDSGIAGWENMGMGFKFQKGMAMGWERE*
Ga0126329_1040447513300012273Marine Gutless WormsVSFALPGGNGKDSGIAGWENMGMGFKFQTGMGMGWEW
Ga0126335_113664113300012887Marine Gutless WormsVSFELPGGNGRDSGIAGWENMGMGFKFQMGVGMGWEWK*
Ga0209562_102682743300027519Marine Gutless Worms SymbiontMVSFVFPGENGRDLGIAGWEHMGMGMGFKFQVGMGMGWEWE
Ga0209562_127323833300027519Marine Gutless Worms SymbiontYNVSFELPNRNGRDLGIAGWKNMGMGFKFQMGMGIGWEWERSH
Ga0209255_130642523300027550Marine Gutless Worms SymbiontVSYEFPDGNGRYLIIAGWENMGMGFKFQMGMGMKSLKWE
Ga0209255_135688213300027550Marine Gutless Worms SymbiontYDISFELPDGNGRYLEIAELENMGMGFKFQMGMAMEWEWE
Ga0209255_138733813300027550Marine Gutless Worms SymbiontMFELPGGNGRILGIAGQENMGLGLNGNGMGMKSLNWE
Ga0209789_1013121813300027624Marine Gutless Worms SymbiontHSMMCRFELQDGNGRDMGIAGWENMGMGFKFQMGMGMGWEWE


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