Basic Information | |
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Family ID | F087847 |
Family Type | Metagenome |
Number of Sequences | 110 |
Average Sequence Length | 55 residues |
Representative Sequence | MPKRSVTFEQFKKALAEYYEDFTVGYQEQPTEQDLKDLYEDFLESGKTLDEYSKDC |
Number of Associated Samples | 25 |
Number of Associated Scaffolds | 110 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 76.36 % |
% of genes near scaffold ends (potentially truncated) | 14.55 % |
% of genes from short scaffolds (< 2000 bps) | 60.00 % |
Associated GOLD sequencing projects | 23 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.54 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (53.636 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment (76.364 % of family members) |
Environment Ontology (ENVO) | Unclassified (87.273 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Unclassified (68.182 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 40.48% β-sheet: 0.00% Coil/Unstructured: 59.52% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.54 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 110 Family Scaffolds |
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PF01555 | N6_N4_Mtase | 8.18 |
PF09719 | C_GCAxxG_C_C | 3.64 |
PF01909 | NTP_transf_2 | 3.64 |
PF13589 | HATPase_c_3 | 3.64 |
PF00571 | CBS | 1.82 |
PF00535 | Glycos_transf_2 | 1.82 |
PF01850 | PIN | 1.82 |
PF10049 | DUF2283 | 1.82 |
PF16199 | Radical_SAM_C | 1.82 |
PF01918 | Alba | 1.82 |
PF01878 | EVE | 1.82 |
PF01638 | HxlR | 0.91 |
PF13175 | AAA_15 | 0.91 |
PF03484 | B5 | 0.91 |
PF13641 | Glyco_tranf_2_3 | 0.91 |
PF13520 | AA_permease_2 | 0.91 |
PF02074 | Peptidase_M32 | 0.91 |
PF01934 | HepT-like | 0.91 |
PF05942 | PaREP1 | 0.91 |
PF00026 | Asp | 0.91 |
PF13419 | HAD_2 | 0.91 |
PF00710 | Asparaginase | 0.91 |
PF01978 | TrmB | 0.91 |
PF01467 | CTP_transf_like | 0.91 |
PF04008 | Adenosine_kin | 0.91 |
PF00528 | BPD_transp_1 | 0.91 |
PF04480 | DUF559 | 0.91 |
PF13302 | Acetyltransf_3 | 0.91 |
PF07705 | CARDB | 0.91 |
PF00145 | DNA_methylase | 0.91 |
PF02080 | TrkA_C | 0.91 |
PF03060 | NMO | 0.91 |
PF00994 | MoCF_biosynth | 0.91 |
COG ID | Name | Functional Category | % Frequency in 110 Family Scaffolds |
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COG0863 | DNA modification methylase | Replication, recombination and repair [L] | 8.18 |
COG1041 | tRNA G10 N-methylase Trm11 | Translation, ribosomal structure and biogenesis [J] | 8.18 |
COG2189 | Adenine specific DNA methylase Mod | Replication, recombination and repair [L] | 8.18 |
COG0252 | L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D | Translation, ribosomal structure and biogenesis [J] | 1.82 |
COG1581 | DNA/RNA-binding protein AlbA/Ssh10b | Transcription [K] | 1.82 |
COG1673 | Predicted RNA-binding protein, contains PUA-like EVE domain | General function prediction only [R] | 1.82 |
COG2947 | Predicted RNA-binding protein, contains EVE domain | General function prediction only [R] | 1.82 |
COG0072 | Phenylalanyl-tRNA synthetase beta subunit | Translation, ribosomal structure and biogenesis [J] | 0.91 |
COG0270 | DNA-cytosine methylase | Replication, recombination and repair [L] | 0.91 |
COG0516 | IMP dehydrogenase/GMP reductase | Nucleotide transport and metabolism [F] | 0.91 |
COG1733 | DNA-binding transcriptional regulator, HxlR family | Transcription [K] | 0.91 |
COG1839 | Adenosine/AMP kinase | Nucleotide transport and metabolism [F] | 0.91 |
COG2070 | NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family | General function prediction only [R] | 0.91 |
COG2317 | Zn-dependent carboxypeptidase, M32 family | Posttranslational modification, protein turnover, chaperones [O] | 0.91 |
COG2361 | HEPN domain protein, predicted toxin of MNT-HEPN system | Defense mechanisms [V] | 0.91 |
COG2445 | Uncharacterized HEPN domain protein YutE, UPF0331/DUF86 family | General function prediction only [R] | 0.91 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 53.64 % |
All Organisms | root | All Organisms | 46.36 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300001782|WOR52_10004437 | All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota | 21913 | Open in IMG/M |
3300009943|Ga0117933_1351123 | Not Available | 724 | Open in IMG/M |
3300010284|Ga0129301_1092326 | All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon | 600 | Open in IMG/M |
3300010324|Ga0129297_10079321 | All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Thermofilales → Thermofilaceae → Thermofilum → Thermofilum adornatum | 1556 | Open in IMG/M |
3300010324|Ga0129297_10325242 | Not Available | 690 | Open in IMG/M |
3300010324|Ga0129297_10357044 | Not Available | 654 | Open in IMG/M |
3300010324|Ga0129297_10412354 | Not Available | 602 | Open in IMG/M |
3300010324|Ga0129297_10469721 | Not Available | 556 | Open in IMG/M |
3300010324|Ga0129297_10493271 | Not Available | 539 | Open in IMG/M |
3300010328|Ga0129298_10096040 | All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota | 1405 | Open in IMG/M |
3300010328|Ga0129298_10104063 | All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon | 1344 | Open in IMG/M |
3300010328|Ga0129298_10281023 | Not Available | 770 | Open in IMG/M |
3300010328|Ga0129298_10382411 | All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota | 648 | Open in IMG/M |
3300012931|Ga0153915_11074852 | All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon | 938 | Open in IMG/M |
(restricted) 3300013127|Ga0172365_10015424 | All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota | 5516 | Open in IMG/M |
(restricted) 3300013127|Ga0172365_10023708 | All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon | 4329 | Open in IMG/M |
(restricted) 3300013127|Ga0172365_10038431 | Not Available | 3256 | Open in IMG/M |
(restricted) 3300013127|Ga0172365_10045985 | All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon | 2928 | Open in IMG/M |
(restricted) 3300013127|Ga0172365_10082347 | Not Available | 2073 | Open in IMG/M |
(restricted) 3300013127|Ga0172365_10103480 | All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota | 1815 | Open in IMG/M |
(restricted) 3300013127|Ga0172365_10815835 | All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon | 525 | Open in IMG/M |
(restricted) 3300013128|Ga0172366_10695946 | All Organisms → cellular organisms → Archaea | 596 | Open in IMG/M |
(restricted) 3300013129|Ga0172364_10122989 | All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota | 1790 | Open in IMG/M |
(restricted) 3300013133|Ga0172362_10744315 | Not Available | 655 | Open in IMG/M |
3300022548|Ga0212092_1270247 | All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon | 600 | Open in IMG/M |
3300022551|Ga0212089_10094221 | All Organisms → cellular organisms → Archaea → Euryarchaeota | 1618 | Open in IMG/M |
3300022551|Ga0212089_10128965 | Not Available | 1315 | Open in IMG/M |
3300022551|Ga0212089_10313937 | Not Available | 732 | Open in IMG/M |
3300022551|Ga0212089_10471476 | Not Available | 560 | Open in IMG/M |
3300022551|Ga0212089_10560579 | Not Available | 501 | Open in IMG/M |
3300025143|Ga0209314_10302516 | Not Available | 501 | Open in IMG/M |
3300025144|Ga0209725_1139829 | Not Available | 768 | Open in IMG/M |
3300025146|Ga0209322_10034163 | Not Available | 2504 | Open in IMG/M |
3300027893|Ga0209636_10388965 | All Organisms → cellular organisms → Archaea | 1191 | Open in IMG/M |
3300027893|Ga0209636_10419193 | Not Available | 1133 | Open in IMG/M |
3300027893|Ga0209636_10618792 | Not Available | 867 | Open in IMG/M |
(restricted) 3300031587|Ga0315308_1000157 | All Organisms → cellular organisms → Archaea | 36206 | Open in IMG/M |
(restricted) 3300031587|Ga0315308_1006981 | All Organisms → cellular organisms → Archaea → TACK group | 6106 | Open in IMG/M |
(restricted) 3300031587|Ga0315308_1008301 | All Organisms → cellular organisms → Archaea → Euryarchaeota | 5552 | Open in IMG/M |
(restricted) 3300031587|Ga0315308_1009479 | All Organisms → cellular organisms → Archaea | 5161 | Open in IMG/M |
(restricted) 3300031587|Ga0315308_1014537 | Not Available | 4015 | Open in IMG/M |
(restricted) 3300031587|Ga0315308_1016115 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi | 3778 | Open in IMG/M |
(restricted) 3300031587|Ga0315308_1017853 | All Organisms → cellular organisms → Bacteria | 3553 | Open in IMG/M |
(restricted) 3300031587|Ga0315308_1024858 | Not Available | 2908 | Open in IMG/M |
(restricted) 3300031587|Ga0315308_1028661 | Not Available | 2666 | Open in IMG/M |
(restricted) 3300031587|Ga0315308_1032956 | All Organisms → cellular organisms → Archaea | 2444 | Open in IMG/M |
(restricted) 3300031587|Ga0315308_1038275 | All Organisms → cellular organisms → Archaea | 2227 | Open in IMG/M |
(restricted) 3300031587|Ga0315308_1067462 | All Organisms → cellular organisms → Archaea | 1547 | Open in IMG/M |
(restricted) 3300031587|Ga0315308_1087848 | Not Available | 1299 | Open in IMG/M |
(restricted) 3300031587|Ga0315308_1300278 | Not Available | 552 | Open in IMG/M |
(restricted) 3300031593|Ga0315307_1096067 | Not Available | 1068 | Open in IMG/M |
(restricted) 3300031593|Ga0315307_1118997 | Not Available | 932 | Open in IMG/M |
(restricted) 3300031604|Ga0315309_1000312 | All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota | 29152 | Open in IMG/M |
(restricted) 3300031604|Ga0315309_1029189 | Not Available | 2719 | Open in IMG/M |
(restricted) 3300031604|Ga0315309_1037537 | All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci → Thermococcales → Thermococcaceae → Thermococcus → Thermococcus barophilus | 2329 | Open in IMG/M |
(restricted) 3300031604|Ga0315309_1040986 | All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → unclassified Methanosarcinaceae → Methanosarcinaceae archaeon | 2205 | Open in IMG/M |
(restricted) 3300031604|Ga0315309_1136776 | All Organisms → cellular organisms → Archaea | 1004 | Open in IMG/M |
(restricted) 3300031604|Ga0315309_1160807 | Not Available | 899 | Open in IMG/M |
(restricted) 3300031604|Ga0315309_1177276 | Not Available | 840 | Open in IMG/M |
(restricted) 3300031604|Ga0315309_1178085 | Not Available | 838 | Open in IMG/M |
(restricted) 3300031604|Ga0315309_1197434 | Not Available | 779 | Open in IMG/M |
(restricted) 3300031604|Ga0315309_1359443 | Not Available | 503 | Open in IMG/M |
(restricted) 3300031806|Ga0315306_10028008 | All Organisms → cellular organisms → Archaea | 2243 | Open in IMG/M |
(restricted) 3300031806|Ga0315306_10097109 | Not Available | 1131 | Open in IMG/M |
(restricted) 3300031806|Ga0315306_10155569 | Not Available | 861 | Open in IMG/M |
(restricted) 3300031806|Ga0315306_10170100 | Not Available | 817 | Open in IMG/M |
(restricted) 3300031806|Ga0315306_10240385 | Not Available | 662 | Open in IMG/M |
(restricted) 3300031806|Ga0315306_10246922 | Not Available | 651 | Open in IMG/M |
(restricted) 3300031806|Ga0315306_10305359 | Not Available | 570 | Open in IMG/M |
(restricted) 3300031806|Ga0315306_10326792 | Not Available | 546 | Open in IMG/M |
3300031862|Ga0315280_10055915 | All Organisms → cellular organisms → Archaea | 3285 | Open in IMG/M |
3300031862|Ga0315280_10068551 | Not Available | 2793 | Open in IMG/M |
3300031862|Ga0315280_10098454 | Not Available | 2079 | Open in IMG/M |
3300031862|Ga0315280_10119722 | All Organisms → cellular organisms → Archaea | 1763 | Open in IMG/M |
3300031862|Ga0315280_10193613 | All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon | 1171 | Open in IMG/M |
3300031862|Ga0315280_10224606 | Not Available | 1031 | Open in IMG/M |
(restricted) 3300031876|Ga0315310_10006695 | Not Available | 7025 | Open in IMG/M |
(restricted) 3300031876|Ga0315310_10007248 | All Organisms → cellular organisms → Archaea → Euryarchaeota | 6733 | Open in IMG/M |
(restricted) 3300031876|Ga0315310_10027404 | Not Available | 3246 | Open in IMG/M |
(restricted) 3300031876|Ga0315310_10033974 | All Organisms → cellular organisms → Bacteria | 2853 | Open in IMG/M |
(restricted) 3300031876|Ga0315310_10052417 | All Organisms → cellular organisms → Bacteria | 2174 | Open in IMG/M |
(restricted) 3300031876|Ga0315310_10052534 | All Organisms → cellular organisms → Bacteria | 2171 | Open in IMG/M |
(restricted) 3300031876|Ga0315310_10142710 | Not Available | 1126 | Open in IMG/M |
(restricted) 3300031876|Ga0315310_10221092 | Not Available | 838 | Open in IMG/M |
(restricted) 3300031876|Ga0315310_10263633 | Not Available | 741 | Open in IMG/M |
(restricted) 3300031876|Ga0315310_10303813 | Not Available | 672 | Open in IMG/M |
(restricted) 3300031876|Ga0315310_10315355 | Not Available | 655 | Open in IMG/M |
(restricted) 3300031876|Ga0315310_10330686 | Not Available | 634 | Open in IMG/M |
(restricted) 3300031876|Ga0315310_10366826 | Not Available | 589 | Open in IMG/M |
(restricted) 3300031877|Ga0315314_1000334 | All Organisms → cellular organisms → Archaea | 57380 | Open in IMG/M |
(restricted) 3300031877|Ga0315314_1000546 | All Organisms → cellular organisms → Archaea | 40485 | Open in IMG/M |
(restricted) 3300031877|Ga0315314_1015476 | All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota | 4646 | Open in IMG/M |
(restricted) 3300031877|Ga0315314_1016922 | Not Available | 4369 | Open in IMG/M |
(restricted) 3300031877|Ga0315314_1022468 | All Organisms → cellular organisms → Archaea | 3607 | Open in IMG/M |
(restricted) 3300031877|Ga0315314_1025315 | All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota | 3319 | Open in IMG/M |
(restricted) 3300031877|Ga0315314_1047258 | Not Available | 2123 | Open in IMG/M |
(restricted) 3300031877|Ga0315314_1061157 | All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota | 1756 | Open in IMG/M |
(restricted) 3300031877|Ga0315314_1075630 | Not Available | 1499 | Open in IMG/M |
(restricted) 3300031877|Ga0315314_1144827 | Not Available | 919 | Open in IMG/M |
(restricted) 3300031877|Ga0315314_1206566 | Not Available | 699 | Open in IMG/M |
(restricted) 3300031877|Ga0315314_1217474 | All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota | 672 | Open in IMG/M |
(restricted) 3300031877|Ga0315314_1251656 | Not Available | 602 | Open in IMG/M |
(restricted) 3300031877|Ga0315314_1300914 | Not Available | 526 | Open in IMG/M |
(restricted) 3300031898|Ga0315312_1000020 | All Organisms → cellular organisms → Archaea | 363512 | Open in IMG/M |
(restricted) 3300031898|Ga0315312_1010342 | All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci → Thermococcales → Thermococcaceae | 4896 | Open in IMG/M |
(restricted) 3300031898|Ga0315312_1011463 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 4577 | Open in IMG/M |
(restricted) 3300031898|Ga0315312_1062979 | All Organisms → cellular organisms → Archaea → TACK group | 1322 | Open in IMG/M |
3300032020|Ga0315296_10015966 | All Organisms → cellular organisms → Archaea | 5515 | Open in IMG/M |
3300032020|Ga0315296_10040765 | Not Available | 3187 | Open in IMG/M |
3300032020|Ga0315296_10090911 | All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon | 1965 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Habitat | Taxonomy | Distribution |
Sediment | Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment | 76.36% |
Lake Sediment | Environmental → Aquatic → Freshwater → Lake → Sediment → Lake Sediment | 15.45% |
Marine Sediment | Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment | 2.73% |
Hot Spring Microbial Mat | Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Microbial Mats → Hot Spring Microbial Mat | 1.82% |
Freshwater Wetlands | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands | 0.91% |
Marine Sediment | Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine Sediment | 0.91% |
Hot Spring Fe-Si Sediment | Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Hot Spring Fe-Si Sediment | 0.91% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.91% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300001782 | Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR_deep_samples | Environmental | Open in IMG/M |
3300009943 | Combined Assembly of Gp0139325, Gp0139347, Gp0139348 | Environmental | Open in IMG/M |
3300010284 | Hot spring microbial mat communities from California, USA to study Microbial Dark Matter (Phase II) - Cone Pool mat layer H metaG | Environmental | Open in IMG/M |
3300010324 | Lake sediment bacterial and archeal communities from Gulf of Boni, Indonesia to study Microbial Dark Matter (Phase II) - ?I18A1 metaG | Environmental | Open in IMG/M |
3300010328 | Lake sediment bacterial and archeal communities from Gulf of Boni, Indonesia to study Microbial Dark Matter (Phase II) - ?I19B2 metaG | Environmental | Open in IMG/M |
3300012931 | Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG | Environmental | Open in IMG/M |
3300013127 (restricted) | Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 48cm | Environmental | Open in IMG/M |
3300013128 (restricted) | Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 69cm | Environmental | Open in IMG/M |
3300013129 (restricted) | Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 10cm | Environmental | Open in IMG/M |
3300013133 (restricted) | Sediment microbial communities from Lake Kivu, Rwanda - Sediment s1_kivu2a2 | Environmental | Open in IMG/M |
3300022548 | Cone Pool_combined assembly | Environmental | Open in IMG/M |
3300022551 | Boni_combined assembly | Environmental | Open in IMG/M |
3300025143 | Lake sediment bacterial and archeal communities from Gulf of Boni, Indonesia to study Microbial Dark Matter (Phase II) - ?I19B2 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025144 | Lake sediment bacterial and archeal communities from Gulf of Boni, Indonesia to study Microbial Dark Matter (Phase II) - ?I18A1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025146 | Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 1 | Environmental | Open in IMG/M |
3300027893 | Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-52-54 (SPAdes) | Environmental | Open in IMG/M |
3300031587 (restricted) | Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP3 | Environmental | Open in IMG/M |
3300031593 (restricted) | Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP2 | Environmental | Open in IMG/M |
3300031604 (restricted) | Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP4 | Environmental | Open in IMG/M |
3300031806 (restricted) | Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP1 | Environmental | Open in IMG/M |
3300031862 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_40 | Environmental | Open in IMG/M |
3300031876 (restricted) | Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP5 | Environmental | Open in IMG/M |
3300031877 (restricted) | Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP9 | Environmental | Open in IMG/M |
3300031898 (restricted) | Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP7 | Environmental | Open in IMG/M |
3300032020 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_18 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
WOR52_1000443723 | 3300001782 | Marine Sediment | MPKRSITFEQFKKALANYYEEFTIGDQEQLTEQDLKDLYEDFLESDETLDDYLKHC* |
Ga0117933_13511231 | 3300009943 | Hot Spring Fe-Si Sediment | MTFEQFKKALAEHYEDFTVGYQEQLTEQDLKDLYEDFLESGKTLYEYSKDC* |
Ga0129301_10923262 | 3300010284 | Hot Spring Microbial Mat | MTFKQFKKALAERYEDFTVGYQEQPTEQDLKDLYKDFLEPGKTLDEYSKDC* |
Ga0129297_100793211 | 3300010324 | Lake Sediment | MPKRSITFKQFKKALAERYEDFTIGYQEQPTEQDLKDLYEDFLESGKTLNEYSK |
Ga0129297_103252421 | 3300010324 | Lake Sediment | MTFKQFKKALAKYYEDFTVGYQEQPTEQDLKDLYEDFLESGKTFDEYSKDC* |
Ga0129297_103570443 | 3300010324 | Lake Sediment | MSFEQFKDELAKRYEDFTVGYQEQPTEQDLKDLYEDFLESGKTLDEYSKDC* |
Ga0129297_104123542 | 3300010324 | Lake Sediment | VPRRSLTFEQFKKALAKYYEDFTIGYQEQPTEQDLKDLYEDFLDSGKTLDEYLKPCEQEDNG* |
Ga0129297_104697212 | 3300010324 | Lake Sediment | MPKRSVTFEQFKKALAERYEDFTVGYQEQPTEQDLKDLYEDFLESGKTLD |
Ga0129297_104932711 | 3300010324 | Lake Sediment | TFEQFKKALAEYYEDFTVGYQEQPTEQNLKDLYEDFLESGKTLDEYLKPCEQS* |
Ga0129298_100960402 | 3300010328 | Lake Sediment | MLKRSITFEQFKEALAKHYEDFTIGYQEQPTEQDLKDLYEDFLESGKTLDEYLKHCQQEGNG* |
Ga0129298_101040632 | 3300010328 | Lake Sediment | MRKHCNNTAITFEQFKKALFEYYENFTIGYKEEHLTDQDIKGLYEDFLESDETLDEYLKHC* |
Ga0129298_102810232 | 3300010328 | Lake Sediment | MPKRSVTFEQFKEALAKYYEDFTVGYQEQPTEQDLKDLYEDFLESGKTFDEYSKDC* |
Ga0129298_103824112 | 3300010328 | Lake Sediment | MSFAQFKEELSKRFEDFTAGYQEQPTEQDLKDLYEDFLESGKTLDEYSKEDC* |
Ga0153915_110748522 | 3300012931 | Freshwater Wetlands | MTFEQFIEELAKYDEDFTVGYQEQPTEQDLKDLYADFLTSGKTFEEYAKEEDC* |
(restricted) Ga0172365_100154242 | 3300013127 | Sediment | MPERSITFDQFKKALAKYYEDFTIGYQEQPTEQDLKDLYEDFLDSGETLDEYLKHC* |
(restricted) Ga0172365_100237082 | 3300013127 | Sediment | MPKRSITFEQFKKALSKYYEDFTIGYREQQTEQDLKDLYEDFLESGETLDEYLKHC* |
(restricted) Ga0172365_100384311 | 3300013127 | Sediment | MPERSITFDQFKKALAKYYEDFTIGYHEQPTEQDLKDLYEDFLESGEVLHEYLKHC* |
(restricted) Ga0172365_100459852 | 3300013127 | Sediment | MPRCSITFEQFKEALAKYYEDFTIGYREQPTEQYLKVLYEDFLDSGETLDEYLKHC* |
(restricted) Ga0172365_100823472 | 3300013127 | Sediment | VPERSIGFRQFKEALAKYYEDFTIGYREQLTEQNLKDLYRDFLESGEMLHEYLKHC* |
(restricted) Ga0172365_101034803 | 3300013127 | Sediment | MRKHCNNTAITFEQFKKALFEYYENFTIGYKEEHLPDQDIKGLYEDFLQSDEILDEYLKHC* |
(restricted) Ga0172365_108158351 | 3300013127 | Sediment | CSITFEQFKKALAKYYEDFTIGYQEQPTEQDLKDLYEDFLESGETLDEYLKHCQQEDI* |
(restricted) Ga0172366_106959461 | 3300013128 | Sediment | MPERSISFEQFKEALAKYYEDFTIGYQEQPTEQDLKDLYEDFLESGETLDEYLKHC |
(restricted) Ga0172364_101229893 | 3300013129 | Sediment | MRKHCNNTAITFEQFKKALFEYYENFTIGYKEEHLTDQDIKGLYEDFLQSDEILDEYLKHC* |
(restricted) Ga0172362_107443152 | 3300013133 | Sediment | MPKRSITFEQFKEALAKYYEDFTIGYREQPTEQYLKVLYEDFLDSGETLDEYLKHC* |
Ga0212092_12702472 | 3300022548 | Hot Spring Microbial Mat | MTFKQFKKALAERYEDFTVGYQEQPTEQDLKDLYKDFLEPGKTLDEYSKDC |
Ga0212089_100942211 | 3300022551 | Lake Sediment | MPKRSITFKQFKKALAERYEDFTIGYQEQPTEQDLKDLYEDFLESGKTLNEYSKEDC |
Ga0212089_101289651 | 3300022551 | Lake Sediment | MRKHCNNTAITFEQFKKALFEYYENFTIGYKEEHLTDQDIKGLYEDFLESDETLDEYLKH |
Ga0212089_103139371 | 3300022551 | Lake Sediment | MTFKQFKKALAKYYEDFTVGYQEQPTEQDLKDLYEDFLESGKTFDEYSKDC |
Ga0212089_104714762 | 3300022551 | Lake Sediment | MPKRSVTFEQFKKALAERYEDFTVGYQEQPTEQDLKDLYEDFLESGKTLDE |
Ga0212089_105605791 | 3300022551 | Lake Sediment | MPKRSVTFEQFKEALAKYYEDFTVGYQEQPTEQDLKDLYEDFLESGKTFDEYSKDC |
Ga0209314_103025161 | 3300025143 | Lake Sediment | MPRRSITFEQFKEALAKYYEDFTIGYQEQPTEQDLKDLYEDFLESGKTIDEYLKHC |
Ga0209725_11398292 | 3300025144 | Lake Sediment | MSKRSMSFEQFKDELAKRYEDFTVGYQEQPTEQDLKDLYEDFLESGKTLDEYSKEDCSQESM |
Ga0209322_100341632 | 3300025146 | Soil | MPRRLITFEQFKKALAKYYEDFTIGYQEQPTEQDLKDLYEDFLDSDKTLDEYSKDC |
Ga0209636_103889652 | 3300027893 | Marine Sediment | MPKRSITFEQFKKALANYYEEFTIGDQEQLTEQDLKDLYEDFLESDETLDDYLKHC |
Ga0209636_104191933 | 3300027893 | Marine Sediment | MSKSSVTFEQFINALAEHFEDFTVGYQEQPTDQDLKDLYEDFLESGESLDDYMRHGQQECNA |
Ga0209636_106187922 | 3300027893 | Marine Sediment | MPKGSVTFEQFIKALVECFEDFTVGYQEQPTEQDLKDLYEDFLEFGKSLDEYMKDC |
(restricted) Ga0315308_100015716 | 3300031587 | Sediment | MPKRSITFEQFKKALAKYYEDFTIGYQEQPTEQDLKDLYEDFLESGETLDEYLKHCQQED |
(restricted) Ga0315308_10069817 | 3300031587 | Sediment | MPKRLMTFRQFKKALAQHYEDFTVGYQEQPTEQDLKDLYKDFLESGKTLDEYSKDC |
(restricted) Ga0315308_10083013 | 3300031587 | Sediment | MTFEQFKKKLAEYFEDFTVGYQEQPTEQDLKDLYEDFLEYGKTFDKYLRYCQQGC |
(restricted) Ga0315308_10094793 | 3300031587 | Sediment | MPKCSMTFEQFKKALAKRYEDFTIGYQEQPTEQDLKDLYEDFLESGKTLDEYSKEDC |
(restricted) Ga0315308_10145374 | 3300031587 | Sediment | LPKRSITFEQFKKALAKYYEDFTIGYQEQPTEQDLKDLYKDFLESDETLEEYLKHC |
(restricted) Ga0315308_10161154 | 3300031587 | Sediment | MPMRSITFEHFKKTLARQYEDFTIGYQEQPTEQDLKDLYEDFLESGKTLDEYSKDC |
(restricted) Ga0315308_10178533 | 3300031587 | Sediment | VTLEQFKAALAKYFEDFTVGYQEQPTEQDLKDLYEDFLEYGKTFDKYLRYCQQDC |
(restricted) Ga0315308_10248587 | 3300031587 | Sediment | MSKRSITFEQFKKALAKYCEDFTVGYQEQPTERDLKDLYEDFLESGETLDEYSKDC |
(restricted) Ga0315308_10286612 | 3300031587 | Sediment | MTFEQFKKALAERYEDFTVCYQEQPTEQDLKDLYKDFLESGKTLDEYSKDC |
(restricted) Ga0315308_10329563 | 3300031587 | Sediment | MTFEQFKEELAKRYEDFTVGYQEQPTEQDLKDLCEDFLESGKTLDEYSKDCSQEGNG |
(restricted) Ga0315308_10382751 | 3300031587 | Sediment | MTFEQFKKALAEYFEDFTVGYQEQPTEQDLKDLYEDFSEFGKSLDEYLKDC |
(restricted) Ga0315308_10674623 | 3300031587 | Sediment | KVMPKRSMTFEQFKEALAKRFEDFTVGYHEQPTEQDLKDLYEDFLESGKTLDEYSKDC |
(restricted) Ga0315308_10878482 | 3300031587 | Sediment | MPKRSMTFEQFKEELAKRYEDFTVGYQEQPTEQDLKDLYEDFLESGKTLDEYSKEDC |
(restricted) Ga0315308_13002781 | 3300031587 | Sediment | MSNRSVTFEQFKEALAKRYEDFTVGYQEQPTEQDLKDLYEDFLESGKTLDEYSKEDC |
(restricted) Ga0315307_10960671 | 3300031593 | Sediment | MPKRSMTFEQFKEELAKRYEDFTVGYQEQPTEQDLKDLYEDFLESGKTLDEYSKDC |
(restricted) Ga0315307_11189972 | 3300031593 | Sediment | VPKSSMSFEQFKEELAKHYEDFTVGYQEQPTEQDLKDLYEDFLQSGKTLDEYSKEDC |
(restricted) Ga0315309_10003128 | 3300031604 | Sediment | MTFEQFKKALAEHYEDFTVGYQEQPTEQDLKDLYEDFLESGKTLDEYSKDC |
(restricted) Ga0315309_10291896 | 3300031604 | Sediment | MLRPSVTFEQFKKALTKYYEDFTIGYQEQPTEQDLKDLYKDFLESGKTLKEYSKEDC |
(restricted) Ga0315309_10375373 | 3300031604 | Sediment | MPKRSMTFEQFKEELAKRYEDFTVGYQEQPTEQDLKDLYEDFLESGKT |
(restricted) Ga0315309_10409862 | 3300031604 | Sediment | MPKRSVTFEQFKKALAEYYEDFTVGYQEQPTEQDLKDLYEDFLESGKTLDEYSKDC |
(restricted) Ga0315309_11367762 | 3300031604 | Sediment | MTFEQFKEELAQRYEDFTVGYQEQPTEQDLKDLCEDFLESGKTLDEYSKDCSQEGNG |
(restricted) Ga0315309_11608071 | 3300031604 | Sediment | LPERSVTFEQFKKALAKHYEDFTIGYQEQPTEQDLKDLYKDFLES |
(restricted) Ga0315309_11772762 | 3300031604 | Sediment | MPKRSMTFEQFKEGLAKRYEDFTVGYQEQPTEQDLKDLYEDFLESGKTLDEYSKEDC |
(restricted) Ga0315309_11780852 | 3300031604 | Sediment | MTFEQFKEALAERYEDFTVGYQEQPTEQDLKDLYEDFLESGKTLDGYSKDC |
(restricted) Ga0315309_11974342 | 3300031604 | Sediment | LPKRSMTFEQFKEELAKRFEDFTVGYQEQPTEQDLKDLYEDFLESGKTLDEYSKDC |
(restricted) Ga0315309_13594432 | 3300031604 | Sediment | QFREALAKYYEDFTIGYQEQPTEQDLKDLCEDFLESGKTLDEYSKDC |
(restricted) Ga0315306_100280081 | 3300031806 | Sediment | STRKGSMTFEQFKKALAEYFEDFTVGYQEQPTEQDLKDLYEDFSEFGKSLDEYLKDC |
(restricted) Ga0315306_100971093 | 3300031806 | Sediment | MSKRSMTFEQFKKVLAECYEDFTVGYQEQPTEQDLKDLYNDFLESGKPFDEYLKYCQQDC |
(restricted) Ga0315306_101555691 | 3300031806 | Sediment | MRSITFEHFKKTLARQYEDFTIGYQEQPTEQDLKDLYEDFLESGKTLDEYSKDC |
(restricted) Ga0315306_101701001 | 3300031806 | Sediment | LPERSVTFEQFKKALAKYYEDFTVGYQEQPTEQDLKDLYKDFLESGKTLDEYSKDC |
(restricted) Ga0315306_102403852 | 3300031806 | Sediment | MPKRSVTFEQFKEALAKCYEDFTIGYQEQPTEQDLKDLYEDFLESGKTLDEYSKEDC |
(restricted) Ga0315306_102469221 | 3300031806 | Sediment | KGSVTFEQFKKALAEYFEDFTVGYQEQPTEQDLKDLYEDFLESGKSLDEYLKHGQQECNG |
(restricted) Ga0315306_103053591 | 3300031806 | Sediment | MPKRSITFEQFKKALAKHYEDFVIGDKDQRTEQDLKILYEDFLDSSEPLDEYLKHC |
(restricted) Ga0315306_103267921 | 3300031806 | Sediment | MSKRSMTFEQFKEELAKRYEDFTVSYQEQPTEQDLKDLYKDFLESGKTLDEYSKDC |
Ga0315280_100559155 | 3300031862 | Sediment | MPERSITFEQFKKALAKYYEDFTIGYQEQPTEQDLKDLYEDFLESGETLDEYLKHC |
Ga0315280_100685514 | 3300031862 | Sediment | VPKRSITFEQFKKALAKHYNDFTIGYREPPTEQYLKDLYEDFLESSETLDEYLKHC |
Ga0315280_100984544 | 3300031862 | Sediment | MPRRSITFEQFKKALAEYYEDFTIGYQEQPTEQDLKDLYKDFLESGKTLDEYSKDC |
Ga0315280_101197221 | 3300031862 | Sediment | VSKRSISFEQFKKALAKYYEDFTIGYQEQPTEQDLKDLYEDFLESSETLDEYLKHC |
Ga0315280_101936132 | 3300031862 | Sediment | MPKRSITFEQFKKALAKHYNDFTIGYREPPTEQYLKDLYEDFLESSETLDEYLKHC |
Ga0315280_102246062 | 3300031862 | Sediment | VPKRSITFEQFKKALAKYYEDFTIGYQEQPTEQDLKDLYEDFLESNETLDEYLKHC |
(restricted) Ga0315310_1000669510 | 3300031876 | Sediment | MKALAGYFEDFTVGYQEQPTEQDLKDLYEDFLEYGKTFKEYLRYCRQDC |
(restricted) Ga0315310_100072486 | 3300031876 | Sediment | MPKRSITFEQFKKALAKRYEDFAVGYQEQPTEQDLKDLYEDFLESGKTLDEYSKEDC |
(restricted) Ga0315310_100274043 | 3300031876 | Sediment | MTFEQFKKALAERYEDFTVGYQEQPTEQDLKDLYKDFLESGKTLDQYSKDC |
(restricted) Ga0315310_100339743 | 3300031876 | Sediment | MTFEQFKEELAKRFEDFTVGYQEQPTEQDLKDLYDDFLESGKTLNEYSKEDC |
(restricted) Ga0315310_100524172 | 3300031876 | Sediment | VSERSITFEQFKEELAKRYEDFTVGYQEQPTEQDLKDLYEDFVESGKTLDEYSKDC |
(restricted) Ga0315310_100525341 | 3300031876 | Sediment | VPRRSITFEQFKEELAKRFKDFAVGYQEQPTEQDLKDLYEDFLESGKTLDEYSKDQDCK |
(restricted) Ga0315310_101427101 | 3300031876 | Sediment | MPKRSMTFEQFKKALAERYEDFTVGYQEQPTEQNLKDLYEDFLESGKTLDEY |
(restricted) Ga0315310_102210922 | 3300031876 | Sediment | MPKRSITFEQFKEALAKRYEDFTVGYQEQPTEQDLKDLYEDFLESGKTLDEYSKEDC |
(restricted) Ga0315310_102636332 | 3300031876 | Sediment | LPERSIAFEQFKKALAERYEDFTVGYQEQATEQDLKDLYEDFLEFGKSLDEYLKDC |
(restricted) Ga0315310_103038131 | 3300031876 | Sediment | MPRRSVTFEQFKKALGKHYEDFTVGYQEQPTEQDLKDLYEDFLESGKTLNEYSKDC |
(restricted) Ga0315310_103153551 | 3300031876 | Sediment | MPKDSMTFEQFKKALAERYEDLTVGYQEQPTEQDLKDLYEDFLESGKTLNEYSKEDC |
(restricted) Ga0315310_103306861 | 3300031876 | Sediment | VPERSITFEQFKKALAKRYEDFTVGYQEQPTEQDLKDLYQDFLESGKTLDEYSKDC |
(restricted) Ga0315310_103668262 | 3300031876 | Sediment | MPERSMTFEQFKEELAKRYEDFTVGYQEQPTEQDLKDLYKDFLESGKTLDEYSKEDC |
(restricted) Ga0315314_100033422 | 3300031877 | Sediment | MLKRSLTFEQFKKALAEHYEDFTIGYQEQPTEQDLKDLYEDFLESGKTLNEYLKHCQQE |
(restricted) Ga0315314_100054612 | 3300031877 | Sediment | VTLEQFKKALAEYFEDFTVGYQEQPTEQDLKDLYEDFLKYGKAFDEYLRYCQQDC |
(restricted) Ga0315314_10154763 | 3300031877 | Sediment | MPKRSITFEQFKEALAKYYEDFTVGYQEQPTEQDLKDLYKDFLESGKTLDEYSKEDC |
(restricted) Ga0315314_10169222 | 3300031877 | Sediment | MTFEQFKEELAERYEDFTVGYQEQPTEQDLKDLYEDFLESGKTLDEYSKEDC |
(restricted) Ga0315314_10224683 | 3300031877 | Sediment | MPKDSMTFEQFKKTLAKYHEDFADCYHEQPTEQDLKDLYEDFLGSGKTLDEYSKEDC |
(restricted) Ga0315314_10253155 | 3300031877 | Sediment | MKNMNIIQVIKKELAKHYEDFTVDYQEQPTEQDLKDLYEDFVQSGKTLDEYSKDC |
(restricted) Ga0315314_10472582 | 3300031877 | Sediment | MPKRPVTFEQFKKALAKYHEDSTIGYKEQLTEQDQKNLYKDFLESDETLDEYLKHC |
(restricted) Ga0315314_10611573 | 3300031877 | Sediment | VTFEQFLKALAEYSEDFTVGYQEQPTDQDLKDLYEDFLESGENLDDYLKYGQQECND |
(restricted) Ga0315314_10756303 | 3300031877 | Sediment | VTFEQFKKALAKYYEDFTIGYQEQPTEQDLKDLYKDFLESDKTLNEYSKEDC |
(restricted) Ga0315314_11448272 | 3300031877 | Sediment | MGVPRHSITLEQFKKALAKYYEDFTVGYQEQPTEQDLKDLYEDFLESGKTLDEYSKDC |
(restricted) Ga0315314_12065662 | 3300031877 | Sediment | MTFEQFKEALAKYCEDFTVGYQEQPTEQDLKDLYEDFLESGKTLDEYSKDC |
(restricted) Ga0315314_12174741 | 3300031877 | Sediment | MTFEQFKKALAEHYDDFTIGYQEQPTEQDLKDLYEDFLQSGKTLEEYSKDC |
(restricted) Ga0315314_12516562 | 3300031877 | Sediment | VPKSSITFEQFKKELAELYEDFTVGYQEQPTEQDLKDLYEDFLESGKTLDEYSKEDC |
(restricted) Ga0315314_13009142 | 3300031877 | Sediment | MLKRSLTFEQFKKALAERYEDFTIGYQEQPTEQDLKDLYKDFLESGKTLNEYSKDC |
(restricted) Ga0315312_10000208 | 3300031898 | Sediment | MTFKQFKEELAKRYEDFTAGYQEQPTEQDLKDLYEDFLESGKTLDEYSKEDC |
(restricted) Ga0315312_10103429 | 3300031898 | Sediment | MPKRSMTFEQFKKALAKHYEDFTIGYHEQPTEQDLKDLYKDFLESGKTLNEYSKEDC |
(restricted) Ga0315312_10114632 | 3300031898 | Sediment | LYIANAFLPTTSLTFEQFKKALAKYYEDFTVGYQEQPTEQDLKDLYKDFLESGKTLNEYSKEDC |
(restricted) Ga0315312_10629792 | 3300031898 | Sediment | VPERSITFEQFKKALANYHEDFTIGYQEQPTEQDLKDVYEDFLESGKTLDEYSKDC |
Ga0315296_100159664 | 3300032020 | Sediment | MPKRSITFEQFKKALAKYYEDFTIGYQEQPTEQDLKDLYEDFLESGETLDEYLKHC |
Ga0315296_100407652 | 3300032020 | Sediment | MPKCLITFDQFKKALSKYYEDFTIGYQEQPTEQDLKDLYEDLLESGETLDEYLKHC |
Ga0315296_100909112 | 3300032020 | Sediment | MPKCSITFEQFRKALAQYYEDFTIGYQEQQTEQYQKDLYEDFLESDETLDEYLKHC |
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