Metagenome Family F087803

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F087803
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	87 residues
Representative Sequence	ARKPGYFHVLGGPIRAVRLIRRAVRIYRGFPTGEPELFDNLARRLSIRFFRPEHYMIDGDILPPVERLDVDVACRVTLIRG
Number of Associated Samples	96
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	95.45 %
% of genes from short scaffolds (< 2000 bps)	91.82 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (92.727 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (25.455 % of family members)
Environment Ontology (ENVO)	Unclassified (41.818 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.182 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 7.34% β-sheet: 29.36% Coil/Unstructured: 63.30%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF01048	PNP_UDP_1	11.82
PF01243	Putative_PNPOx	8.18
PF00892	EamA	7.27
PF00135	COesterase	5.45
PF00293	NUDIX	2.73
PF00080	Sod_Cu	2.73
PF07927	HicA_toxin	0.91
PF06863	DUF1254	0.91
PF04116	FA_hydroxylase	0.91
PF08241	Methyltransf_11	0.91
PF13649	Methyltransf_25	0.91
PF03477	ATP-cone	0.91
PF01926	MMR_HSR1	0.91
PF00589	Phage_integrase	0.91
PF01909	NTP_transf_2	0.91
PF03475	3-alpha	0.91
PF00535	Glycos_transf_2	0.91
PF13435	Cytochrome_C554	0.91
PF13561	adh_short_C2	0.91
PF00294	PfkB	0.91
PF12847	Methyltransf_18	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0775	Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB	Nucleotide transport and metabolism [F]	11.82
COG0813	Purine-nucleoside phosphorylase	Nucleotide transport and metabolism [F]	11.82
COG2820	Uridine phosphorylase	Nucleotide transport and metabolism [F]	11.82
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	5.45
COG2032	Cu/Zn superoxide dismutase	Inorganic ion transport and metabolism [P]	2.73
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.91
COG2258	N-hydroxylaminopurine reductase YiiM, contains MOSC domain	Defense mechanisms [V]	0.91
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	0.91
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.73 %
Unclassified	root	N/A	7.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.73 %
Unclassified	root	N/A	7.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.73 %
Unclassified	root	N/A	7.27 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	68.18 %
Unclassified	root	N/A	7.27 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.91 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	67.27 %
Unclassified	root	N/A	7.27 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %
Deinococcus-Thermus	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus	0.91 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	67.27 %
Unclassified	root	N/A	7.27 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.91 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	0.91 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	60.91 %
Unclassified	root	N/A	7.27 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.91 %
Deinococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales	0.91 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.91 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	60.91 %
Unclassified	root	N/A	7.27 %
Elstera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Elstera	0.91 %
Deinococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae	0.91 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.91 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	60.91 %
Unclassified	root	N/A	7.27 %
Labilitrichaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae	0.91 %
Elstera litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Elstera → Elstera litoralis	0.91 %
Deinococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	0.91 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	60.91 %
Unclassified	root	N/A	7.27 %
Labilithrix	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix	0.91 %
Deinococcus apachensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus apachensis	0.91 %
Elstera litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Elstera → Elstera litoralis	0.91 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	60.91 %
Unclassified	root	N/A	7.27 %
Labilithrix luteola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix → Labilithrix luteola	0.91 %
Deinococcus apachensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus apachensis	0.91 %
Elstera litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Elstera → Elstera litoralis	0.91 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090009\|LWAnN_F624WLL02F29NN	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300000955\|JGI1027J12803_100647767	All Organisms → cellular organisms → Bacteria	1252	Open in IMG/M
3300001431\|F14TB_100197816	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	697	Open in IMG/M
3300005167\|Ga0066672_10983991	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	516	Open in IMG/M
3300005171\|Ga0066677_10074184	All Organisms → cellular organisms → Bacteria	1754	Open in IMG/M
3300005176\|Ga0066679_10449840	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	843	Open in IMG/M
3300005181\|Ga0066678_10047294	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2434	Open in IMG/M
3300005328\|Ga0070676_10984062	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300005332\|Ga0066388_101264196	All Organisms → cellular organisms → Bacteria	1269	Open in IMG/M
3300005332\|Ga0066388_102667947	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300005332\|Ga0066388_105689639	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300005335\|Ga0070666_11390378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus apachensis	524	Open in IMG/M
3300005347\|Ga0070668_101599918	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300005354\|Ga0070675_100304372	All Organisms → cellular organisms → Bacteria	1405	Open in IMG/M
3300005355\|Ga0070671_101791598	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300005364\|Ga0070673_101462657	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	644	Open in IMG/M
3300005365\|Ga0070688_101214118	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	606	Open in IMG/M
3300005446\|Ga0066686_10295142	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1100	Open in IMG/M
3300005446\|Ga0066686_10995289	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	545	Open in IMG/M
3300005467\|Ga0070706_101684093	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	578	Open in IMG/M
3300005518\|Ga0070699_101219195	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	690	Open in IMG/M
3300005536\|Ga0070697_100869963	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300005552\|Ga0066701_10060734	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2111	Open in IMG/M
3300005552\|Ga0066701_10617393	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300005552\|Ga0066701_10777774	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	571	Open in IMG/M
3300005554\|Ga0066661_10601674	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300005555\|Ga0066692_10314876	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	993	Open in IMG/M
3300005556\|Ga0066707_10583603	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	716	Open in IMG/M
3300005556\|Ga0066707_10701367	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	634	Open in IMG/M
3300005560\|Ga0066670_10685326	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	621	Open in IMG/M
3300005561\|Ga0066699_10424126	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	952	Open in IMG/M
3300005577\|Ga0068857_102519638	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	505	Open in IMG/M
3300005598\|Ga0066706_10844299	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300005614\|Ga0068856_101561685	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	673	Open in IMG/M
3300005713\|Ga0066905_102333094	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300005764\|Ga0066903_105336754	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300005764\|Ga0066903_106976461	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	586	Open in IMG/M
3300006034\|Ga0066656_10941113	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	554	Open in IMG/M
3300006034\|Ga0066656_11052115	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	523	Open in IMG/M
3300006163\|Ga0070715_10480179	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	707	Open in IMG/M
3300006755\|Ga0079222_11254942	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	670	Open in IMG/M
3300006791\|Ga0066653_10046912	All Organisms → cellular organisms → Bacteria	1782	Open in IMG/M
3300006796\|Ga0066665_10831431	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	724	Open in IMG/M
3300006796\|Ga0066665_11092194	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	608	Open in IMG/M
3300006854\|Ga0075425_102855396	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	531	Open in IMG/M
3300007076\|Ga0075435_100825112	Not Available	808	Open in IMG/M
3300009012\|Ga0066710_101204097	Not Available	1173	Open in IMG/M
3300009012\|Ga0066710_102683146	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	711	Open in IMG/M
3300009088\|Ga0099830_11164420	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300009090\|Ga0099827_10984436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Elstera → Elstera litoralis	731	Open in IMG/M
3300009137\|Ga0066709_102332096	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	732	Open in IMG/M
3300009137\|Ga0066709_102569786	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	684	Open in IMG/M
3300009137\|Ga0066709_104282580	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	520	Open in IMG/M
3300009137\|Ga0066709_104434442	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300009143\|Ga0099792_11199727	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	515	Open in IMG/M
3300009148\|Ga0105243_12790310	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	529	Open in IMG/M
3300009162\|Ga0075423_10611924	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1148	Open in IMG/M
3300009174\|Ga0105241_12042903	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	565	Open in IMG/M
3300010303\|Ga0134082_10554324	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	506	Open in IMG/M
3300010323\|Ga0134086_10238330	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	690	Open in IMG/M
3300010325\|Ga0134064_10125020	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	868	Open in IMG/M
3300010335\|Ga0134063_10561321	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	577	Open in IMG/M
3300010336\|Ga0134071_10104955	All Organisms → cellular organisms → Bacteria	1345	Open in IMG/M
3300010360\|Ga0126372_12614618	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	556	Open in IMG/M
3300010376\|Ga0126381_103997770	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	574	Open in IMG/M
3300010391\|Ga0136847_13206086	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	695	Open in IMG/M
3300010397\|Ga0134124_10120059	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2313	Open in IMG/M
3300010401\|Ga0134121_11700206	Not Available	654	Open in IMG/M
3300011271\|Ga0137393_11093037	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	678	Open in IMG/M
3300012189\|Ga0137388_10140319	All Organisms → cellular organisms → Bacteria	2127	Open in IMG/M
3300012912\|Ga0157306_10380903	Not Available	545	Open in IMG/M
3300012922\|Ga0137394_10059441	All Organisms → cellular organisms → Bacteria	3166	Open in IMG/M
3300012972\|Ga0134077_10300986	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	673	Open in IMG/M
3300012975\|Ga0134110_10551459	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	530	Open in IMG/M
3300012976\|Ga0134076_10419347	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	599	Open in IMG/M
3300014150\|Ga0134081_10030902	All Organisms → cellular organisms → Bacteria	1550	Open in IMG/M
3300014154\|Ga0134075_10153289	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300015373\|Ga0132257_104277973	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	519	Open in IMG/M
3300017656\|Ga0134112_10113834	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1023	Open in IMG/M
3300017657\|Ga0134074_1368238	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	532	Open in IMG/M
3300017959\|Ga0187779_10589304	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	743	Open in IMG/M
3300018433\|Ga0066667_11775830	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	557	Open in IMG/M
3300025165\|Ga0209108_10564514	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	537	Open in IMG/M
3300025907\|Ga0207645_11191291	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	512	Open in IMG/M
3300025910\|Ga0207684_10538706	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	999	Open in IMG/M
3300025931\|Ga0207644_11785002	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	515	Open in IMG/M
3300025972\|Ga0207668_12122843	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	506	Open in IMG/M
3300026078\|Ga0207702_10656598	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1032	Open in IMG/M
3300026089\|Ga0207648_11308197	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	681	Open in IMG/M
3300026314\|Ga0209268_1188007	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	511	Open in IMG/M
3300026331\|Ga0209267_1325398	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	509	Open in IMG/M
3300026332\|Ga0209803_1322886	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix → Labilithrix luteola	532	Open in IMG/M
3300026343\|Ga0209159_1177267	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	762	Open in IMG/M
3300026528\|Ga0209378_1233735	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	585	Open in IMG/M
3300026528\|Ga0209378_1234661	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300026540\|Ga0209376_1187609	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	953	Open in IMG/M
3300031720\|Ga0307469_10481894	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1082	Open in IMG/M
3300031740\|Ga0307468_100943714	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	753	Open in IMG/M
3300031765\|Ga0318554_10172457	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1230	Open in IMG/M
3300031860\|Ga0318495_10469524	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	551	Open in IMG/M
3300032002\|Ga0307416_102619311	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	602	Open in IMG/M
3300032059\|Ga0318533_10566994	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300032068\|Ga0318553_10055976	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1952	Open in IMG/M
3300032397\|Ga0315287_12772311	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	519	Open in IMG/M
3300032897\|Ga0335071_10648686	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1006	Open in IMG/M
3300033289\|Ga0310914_11718521	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	531	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.91%
Host-Associated	Host-Associated	19.09%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.18%
Plants	Host-Associated → Plants	19.09%
Aquatic	Environmental → Aquatic	2.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.18%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.55%
Freshwater	Environmental → Aquatic → Freshwater	2.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.64%
Loam	Environmental → Terrestrial → Soil → Loam	12.73%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.45%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.64%
Lake	Environmental → Aquatic → Freshwater → Lake	1.82%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.82%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	31.82%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.09%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.18%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.64%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.82%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.82%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.91%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	25.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	10.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.36%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.73%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.82%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Sediment	0.91%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.91%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.91%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.91%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.91%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090009	Freshwater sediment microbial communities from Lake Washington, Seattle, for methane and nitrogen Cycles - SIP 13C-methane anaerobic+nitrate	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300025165	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LWAnN_06031100	2088090009	Freshwater Sediment	GFQPTYLGNRKRGFLHVLGGPIPARRLIRHALRVYRGFPTGDPALYDNLGQRLTIRFARPTHIMLDGDILDPAERVEVDVPLRVELIRS
JGI1027J12803_1006477671	3300000955	Soil	FRPTYLALRKRGFFHVLGGPIAARRLVRRAVRLHRGFPSGEPDLYDSIGRTLSIRFARPTHIMLDGDILEPVERCEIDVAFRVTLVCG*
F14TB_1001978162	3300001431	Soil	GNRKRGFFHVIGGPVPARRLVRRAVRIYRGFPTGEPLLYDNLGQRLVIHFRRPTHIMLDGDILEPLEHVEVDVPLRVELICS*
Ga0066672_109839912	3300005167	Soil	YLGTRKRGYMHVLGGPIPALRLIRRAVRLYRGFPTGEPTLFDNLARRTTIRFFRPEHWMLDGDILPPAESLDVDVACRVTLIRG*
Ga0066677_100741844	3300005171	Soil	ATVDRIALGFRPTYLGARKPGYFHVLGGPIRAIRLIRRALRIYRGFPTGEPELFDNLARQLSIRFFRPEHYMIDGDILPPVERLDADVACRVTLIRG*
Ga0066679_104498403	3300005176	Soil	DRIALGFRPTYLGTRKRGYCHVLGGPVSAMRLIRRAVRIYRGFPTGEPTLFDNLARHLVIRFFRPEHYMLDGDILSPAERLEVDVPCRVTLIRG*
Ga0066678_100472941	3300005181	Soil	RKRGYMHVVGGPVPAMRLVRRAIRLYRGFPTNEPALFDNLGRRMTIRFFRPEHYMLDGDILPPVERLDVEVPCRVTFIRG*
Ga0070676_109840621	3300005328	Miscanthus Rhizosphere	AVEADVECDGEALPFRLFSFFFSGTIERIALGFQPTYLGNRKRGFFHVLGGPIPARRLIAHGLRVYRGFPTGDPELYDNLGQRLSIRFKRPTHIMLDGDILEPADHVEVDVPLRVELIRS
Ga0066388_1012641963	3300005332	Tropical Forest Soil	GFQPTYLGNRKRGYFHVIGGPVAARRLVRRALRIYRGFPTNEPELYDNIGRHLVIRFARPTHIMLDGDILEPAERVEVDVPLRVELIRG*
Ga0066388_1026679472	3300005332	Tropical Forest Soil	RIALGFQPTYLGNRKRGFFHVIGGPVPARRLVRRAVRVYRGFPTGEPLLYDNLGQRLVIHFRRPTHIMLDGDILEPLEHVEVDVPLRVELICS*
Ga0066388_1056896391	3300005332	Tropical Forest Soil	YLATRKRGYFHVLGGPIPARRLIRRAVRIYRGFPTGEPLLYDSIGKKLSIRFARPTHLMLDGDILEPTDRLEIDVPRRVALIRG*
Ga0070666_113903781	3300005335	Switchgrass Rhizosphere	GYFHVVGGPIAARRLVRRAARVYRGFPTGEPDLYDNMGRRLAIRFARPTHIMLDGDILDSCDTCEVDVPFRVTLVCG*
Ga0070668_1015999181	3300005347	Switchgrass Rhizosphere	VGGPIAARRLVRRAARVFRGFPTGEPDLYDNVGRRLSIRFARPTHIMLDGDILDPCDTCEVDVPFRVTLVCG*
Ga0070675_1003043722	3300005354	Miscanthus Rhizosphere	GTIERIALGFQPTYLGNRKRGFFHVLGGPIPARRLIAHGLRVYRGFPTGDPELYDNLGQRLSIRFKRPTHIMLDGDILEPADHVEVDVPLRVELIRS*
Ga0070671_1017915982	3300005355	Switchgrass Rhizosphere	LRKRWFFHVVGGPIAARRLVRRGVRIHRGFPTGEPDLYDSVGQRMSIKFARPTHIMIDGDILEPVERCEIDVPFRVTLVCG*
Ga0070673_1014626572	3300005364	Switchgrass Rhizosphere	RQFTFFFAATVDRIALGFRPTYLATRKRGYMHVLGGPVPATRLIRRVVRVFRGFPTGEPTLFDNLGKRLTIRFFRPEAFMIDGDILPPIDRLEVDVPCRVTLIRG*
Ga0070688_1012141182	3300005365	Switchgrass Rhizosphere	LMASALAGTHLSRTVFEAVEADVECDGEALPFRLFSFFFSGTIERIALGFQPTYLGNRKRGFFHVLGGPIPARRLIAHGLRVYRGFPTGDPELYDNLGQRLSIRFKRPTHIMLDGDILEPADHVEVDVPLRVELIRS*
Ga0066686_102951421	3300005446	Soil	GYMHVVGGPVPAMRLVRRAIRLYRGFPTNEPALFDNLGRRMTIRFFRPEHYMLDGDILPPVERLDVEVPCRVTFIRG*
Ga0066686_109952891	3300005446	Soil	PTYLGARKPGYFHVLGGPIRSVRLIRRAVRLYRGFPTGEPELFDNLARQLAIRFFRPEHYMIDGDILPPVERLEVDVACRVTLIRG*
Ga0070706_1016840932	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	GFRPTYLGTRKRGHMHVVGGPVPAMRLIRRAVRLYRGFPTGEPSLFDNLARRATIRFFKPEHWMLDGDILSPAERLEVDVPCRVTLIRG*
Ga0070699_1012191952	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	PTYLGTRKRGYCHVLGGPVPALRLIRRAIRIYRGFPTGEPTLFDNLARHLVIHFFRPEHYMLDGDILPPAERLEIDVPCRVTLIRG*
Ga0070697_1008699631	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	QFTFFFAATVDRIALGFRPTYLGTRKRGYMHVLGGPIPAHRLIRRALRIYRGFPTGEPTLFDNLARRTSIRFFKPEHWMLDGDILPPSERLEVEVACRVTLIRG*
Ga0066701_100607341	3300005552	Soil	VGGPVPAMRLIRRAIRLYRGFPTNEPMLFDNLGRRVTIRFFRPEHYMLDGDILPPVERLDVEVPCRVTFIRG*
Ga0066701_106173932	3300005552	Soil	VVGGPIRAVRLIRRAVRIYRGFPTGEPELFDNLARQLAIHFFKPEHYMIDGDILPPVERLEVDVACRVTLIRG*
Ga0066701_107777741	3300005552	Soil	VVGGPVPAMRLIRRAIRIYRGFPTNEPLLFDNLGRHVTIRFFRGEHYMLDGDILPPAERLDVDVACRVTFIRG*
Ga0066661_106016741	3300005554	Soil	LGGPIRAIRLIRRAVRIYRGFPTGEPELFDNLARRLAIHFFKPEHYMIDGDILPPAERLEVDVACRVTLIRG*
Ga0066692_103148761	3300005555	Soil	RKRGYMHVVGGPVPAMRLVRRTIRLYRGFPTNEPALFDNLGRRMTIRFFRPEHYMLDGDILPPVERLDVEVPCRVTFIRG*
Ga0066707_105836032	3300005556	Soil	GFRPTYLGARKPGYFHVLGGPIRAIRLIRRAVRIYRGFPTGEPELFDNLARQLTIHFFKPEHYMIDGDILPPVERLEVDVACRVTLIRG*
Ga0066707_107013672	3300005556	Soil	ARKPGYFHVLGGPIRAIRLIRRALRIYRGFPTGEPELFDNLARQLSIRFFRPEHYMIDGDILPPLERLDVDVACRVTLIRG*
Ga0066670_106853262	3300005560	Soil	HVVGGPVPAMRLIRRAIRLYRGFPTNEPTLFDSLGRRVTIRFFRPEHYMLDGDILPPLDRLDVDVACRVTFIRG*
Ga0066699_104241262	3300005561	Soil	ATVDRIALGFRPTYLGTRKRGYMHVLGGPIAALRLVRRAVRLYRGFPTGEPTLFDNLARRTTIRFFRPEHWMLDGDILPPAEKLDVDVACRVTLIRG*
Ga0070664_1022033901	3300005564	Corn Rhizosphere	GPIAARRLVRRAARVFRGFPTGEPDLYDNVGRRLSIRFARPTHIMLDGDILDPCDTCEVDVPFRVTLVCG*
Ga0068857_1025196382	3300005577	Corn Rhizosphere	GYMHVLGGPIPATRLIRRALRVYRGFPTYEPLLFDNLARTLSVRFFRPQHYMLDGDILPPADRLDVDVACRVTLIRA*
Ga0066706_108442991	3300005598	Soil	AATVDRIALGFRPTYLGARKPGYFHVLGGPIRAIRLIRRALRIYRGFPTGEPELFDNLARQLSIRFFRPEHYMIDGDILPPVERLDVDVACRVTLIRG*
Ga0068856_1015616852	3300005614	Corn Rhizosphere	FAATVDRIALGFRPTYLGTRKRGYMHVLGGPIPALRLIRRAVRIYRGFPTGEPTLFDNLARRTAIRFFRPEHWMLDGDILPPAENLEVDVACRVTLIRG*
Ga0066905_1023330942	3300005713	Tropical Forest Soil	RIALGFQPTYLGNRKRGYFHVIGGPVAARRLVRRALRIYRGFPTNEPDLYDNLGRHLVIRFARPTHIMLDGDILEPAERVEVDVPLRVELIRG*
Ga0066903_1053367542	3300005764	Tropical Forest Soil	LGFKPTYLALRKRGFFHVVGGPIAARRLVRRVVRVYRGFPTGEPELYDSVGQKLTIRFARQTPIMLDGDILEPAEHCEVDVPFRVTLVGG*
Ga0066903_1069764612	3300005764	Tropical Forest Soil	LAATVDRIALGFRPTYLGTRKRGYFHLIGGPASAPALIRRIVRIYRGFPTNMPLLYDNLGRSMTIRFAQPTRFMLDGDVLEPATTLTIDVPLRVRFIGA*
Ga0066656_109411132	3300006034	Soil	ATVDRIALGFRPTYLGTRKRGYCHVLGGPVPAMRLIRRAVCIYRGFPTGEPTLFDNLARHLVIRFFRPEHYMLDGDILSPAERLEVDVPCRVTLIRG*
Ga0066656_110521151	3300006034	Soil	GYMHVVGGPVPAMRLIRRAIRLYRGFPTNEPMLFDNLGRRVTIRFFRPEHYMLDGDILPPVERLDVEVPCRVTFIRG*
Ga0070715_104801792	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	TYLALRKRGFFHVVGGPIHARRLVRRAVRVYRGFPTGEHELYDSVGQKLSIRFKRPTAIMLDGDILDPVEHCEIDVPFRVTLVGG*
Ga0079222_112549421	3300006755	Agricultural Soil	LGTRKPGYFHVVGGPIRAVRLIRRAVRIYRGFPTGEPELFDNLARQLAIRFFKPEHYMIDGDILPPVERLEVDVACRVTLIRG*
Ga0066653_100469124	3300006791	Soil	GARKPGYFHVLGGPIRAVRLIRRAVRIYRGFPTGEPELFDNLARRLSIRFFRPEHYMIDGDILPPVERLDADVACRVTLIRG*
Ga0066665_108314312	3300006796	Soil	LGFRPTYLGARKPGYFHVLGGPIRAIRLIRRAVRIYRGFPTGEPELFDNLARQLTIHFFKPEHYMIDGDILPPVERLEVDVACRVTLIRG*
Ga0066665_110921942	3300006796	Soil	LGFRPTYLGARKPGYFHVLGGPIRAIRLIRRAVRIYRGFPTGEPELFDNLARQLTIHFFKPEHYMIDGDILPPAERLEVDVACRVTLIR*
Ga0075425_1028553962	3300006854	Populus Rhizosphere	YLGSRKRGYMHLLGGPISAMRLIRRVIRIYRGFPTGEPMLFDNLGRRATIRFFRPEVYMLDGDILPAAERLEVDVACRVTLIRG*
Ga0075435_1008251121	3300007076	Populus Rhizosphere	PIPAMRLIRRVIRVYRGFPTGEPMLFDNLGRRATIRFFRPEAYMLDGDILPPAERLEVDVACRVTLIRG*
Ga0066710_1012040972	3300009012	Grasslands Soil	VGGPVPAHRLVRRALRIYRGFPTGEPALFDNLARRTAIRFFKPEHWMLDGDILPPSERLEIEVACRVTLIRG
Ga0066710_1026831462	3300009012	Grasslands Soil	LGFRPTYLGARKPGYFHVLGGPIRAIRLIRRAVRIYRGFPTGEPELFDNLARQLTIHFFKPEHYMIDGDILPPVERLEVDVACRVTLIRG
Ga0099830_111644202	3300009088	Vadose Zone Soil	YFHVLGGPIRAVRLIRRAVRIYRGFPTGEPELFDNLARQLAIRFFKPEHYMIDGDILPPVERLEVDVACRVTLIRG*
Ga0099827_109844362	3300009090	Vadose Zone Soil	TFFFAATVDRIALGFRPTYLGTRKRGYCHVLGGPVPAMRLIRRAVRIYRGFPTGEPTLFDNLARHLVIRFFRPEHYMLDGDILPPAERLEVDVPCRVTLIRG*
Ga0066709_1023320962	3300009137	Grasslands Soil	YMHVVGGPVPAMRLIRRAIRLYRGFPTNEPTLFDNLGSRVIIRFFRPEHYMLDGDILPPVERLDVDVACRVTFIRG*
Ga0066709_1025697862	3300009137	Grasslands Soil	LGFRPTYLGARKPGYFHVLGGPIRAIRLIRRAVRIYRGFPTGEPELFDNLARQLAIHFFKPEHYMIDGDILPPAERLEVDVACRVTLIR*
Ga0066709_1042825802	3300009137	Grasslands Soil	FRPTYLGTRKRGHMHVVGGPIPAYRLIRRVLRVYRGFPTGEPLLFDNLARQTTIRFFKPEHWMLDGDILPPTERLDVEVACRVTLIRG*
Ga0066709_1044344422	3300009137	Grasslands Soil	HVVGGPIRAVRLIRRAVRIYRGFPTGEPELFDNLARQLAIRFFKPEHYMIDGDILPPVERLEVDVACRVTLIRG*
Ga0099792_111997271	3300009143	Vadose Zone Soil	LGARKPGYFHVLGGPIRAVRLIRRAVRIYRGFPTGEPELFDNLARQLAIRFFKPEHYMIDGDILPPVERLEVDVACRVTLIRG*
Ga0105243_127903101	3300009148	Miscanthus Rhizosphere	SRKRGYMHVLGGPIAAHRLIRRALRIYRGFPTGEPSLFDNLARRTTIRFFKPESFMLDGDILPPAERLEVDVPCRVTLIRG*
Ga0075423_106119244	3300009162	Populus Rhizosphere	LGFRPTYLALRKRGFFHVIGGPIHARRLVRRAVRIYRGFPTGEPELYDNVGARLAIRFARPTHIMLDGDILEPVEHCEIDVPFRVTLVRG*
Ga0105241_120429031	3300009174	Corn Rhizosphere	RPTYLATRKRGYMHVLGGPVPATRLIRRVLRVFRGFPTGEPTLFDNLGKRLTIRFFRPEAFMIDGDILPPIDRLEVDVPCRVTLIRG*
Ga0134082_105543241	3300010303	Grasslands Soil	LGFRPTYLGARKPGYFHVLGGPISAIRLIRRAVRIYRGFPTGEAELFDNLARQLSIRFFKPEHYMIDGDILPPVERLDADVACRVTLIRG*
Ga0134086_102383302	3300010323	Grasslands Soil	RQFTFFFAATVDRIALGFRPTYLGARKPGYFHVLGGPIRAVRLIRRAVRIYRGFPTGEPELFDNLARRLSIRFFRPEHYMIDGDILPPVERLDADVACRVTLIRG*
Ga0134064_101250202	3300010325	Grasslands Soil	YLATRKRGYMHVVGGPVPAMRLIRRAIRLYRGFPTNEPTLFDSLGRRVTIRFFRPEHYMLDGDILPPLDRLDVDVACRVTFIRG*
Ga0134063_105613211	3300010335	Grasslands Soil	FRPTYLGARKPGYFHVLGGPIRAIRLIRRAVRIYRGFPTGEPELFDNLARQLTIHFFKPEHYMIDGDILPPAERLEVDVACRVTLIR*
Ga0134071_101049553	3300010336	Grasslands Soil	ARKPGYFHVLGGPIRAVRLIRRAVRIYRGFPTGEPELFDNLARRLSIRFFRPEHYMIDGDILPPVERLDVDVACRVTLIRG*
Ga0126372_126146182	3300010360	Tropical Forest Soil	VPFRQFTFFFAATVDRIALGFRPTYLGTRKRGFFHVLGGPVPATRLIRRALRVYRGFPTGEPTLYDNLGTRMTIRFFRPTHLMLDGDILPAAERLDVDVPLRVTLIRS*
Ga0126381_1039977702	3300010376	Tropical Forest Soil	YFHVLGGPIPARRLIRRAVRIYRGFPTGEPLLYDSIGKKLSIRFARPTHLMLDGDILEPTDRLEIDVPRRVALIRG*
Ga0136847_132060862	3300010391	Freshwater Sediment	QFTFFFAATVDRIALGFRPTYLATRKRGYLHMVGGPIAAPRLIRRALRIYRGFPTGEPALFDNLARRLRIRFFRPEHYMIDGDILPPADRLEVDVPCRVTLIRG*
Ga0134124_101200591	3300010397	Terrestrial Soil	PTYLALRKRGFFHVVGGPIHARRLVRRAVRVYRGFPTGEPELYDSVGQKLSIRFKRPTAIMLDGDILDPVEHCEVDVPFRVTLVGG*
Ga0134121_117002062	3300010401	Terrestrial Soil	YFHVVGGPIAARRLVRRAARVYRGFPTGEPDLYDNMGRRLSIRFARPTHIMLDGDILDPCDTCEIDVPFRVTLVCG*
Ga0137393_110930371	3300011271	Vadose Zone Soil	IALGFRPTYLGARKRGYMHVLGGPVRAVRLIRRVVRLYRGFPTGEPELFDNLAQRLSIRFFKPEHYMLDGDILPPAERLDVHVACRVTLIRG*
Ga0137388_101403191	3300012189	Vadose Zone Soil	HVLGGPIRAVRLIRRAVRIYRGFPTGEPELFDNLARQLAIRFFKPEHYMIDGDILPPVERLEVDVACRVTLIRG*
Ga0157306_103809031	3300012912	Soil	MLAVGIALGFRPTYMGTRKQGYMHVLGGPIPATRLIRRALRVYRGFPTYEPLLFDNLARTLSVRFFRPQHWMLDGDILP
Ga0137394_100594411	3300012922	Vadose Zone Soil	VVGGPIAATRLIRRALRIYRGFPTGEPALFDNLARRTVVRFFRPEHWMLDGDILPPAERLEVDVPCRVTLIRG*
Ga0134077_103009862	3300012972	Grasslands Soil	PVPALRLVRRALRLYRGFPTGEPTLFDNLARRLTVRFFRPEACMMDGDILPPAQVLEVDVPCRVTLIRG*
Ga0134110_105514591	3300012975	Grasslands Soil	LGFRPTYLGARKPGYFHVLGGPIRAVRLIRRAVRIYRGFPTGEPELFDNLARRLSIRFFRPEHYMIDGDILPPVERLDADVACRVTLIRG*
Ga0134076_104193471	3300012976	Grasslands Soil	LERIALGFRPTYLGSRKRGYMHVLGGPVRAVRLIRRVVRLYRGFPTGEPDLFDNLARQLAIRFFKPEHYMIDGDILPPVERLEVDVACRVTLIRG*
Ga0134081_100309021	3300014150	Grasslands Soil	RPTYLGARKPGYFHVLGGPIRAIRLIRRAVRIYRGFPTGEPELFDNLARQLAIHFFKPEHYMIDGDILPPAERLEVDVACRVTLIRG*
Ga0134075_101532892	3300014154	Grasslands Soil	TVAEAGRLIRSGDGTIRRLIRRAVRIYRGFPTGEPELFDNLARRLSIRFFRPEHYMIDGDILPPVERLDVDVACRVTLIRG*
Ga0132257_1042779732	3300015373	Arabidopsis Rhizosphere	ADVECDGEALPFRLFSFFFSGTIERIALGFQPTYLGNRKRGFFHVLGGPIPARRLIAHGLRVYRGFPTGDPELYDNLGQRLSIRFKRPTHIMLDGDILEPADHVEVDVPLRVELIRS*
Ga0134112_101138342	3300017656	Grasslands Soil	MHVVGGPVPAMRLVRRAIRLYRGFPTNEPALFDNLGRRMTIRFFRPEHYMLDGDILPPAERLDVEVPCRVTFIRG
Ga0134074_13682382	3300017657	Grasslands Soil	QFTFFFAATVDRIALGFRPTYLGTRKRGYCHVLGGPVSAMRLIRRAVRIYRGFPTGEPTLFDNLARHLVIRFFRPEHYMLDGDILPPAERLEVDVPCRVTLIRG
Ga0187779_105893042	3300017959	Tropical Peatland	FQPTYLATRKRGYFHVLGGPIPARRLIRRAVRVYRGFPTGEPLLYDSIGRKLQIRFARPTHLMLDGDILEPMERLEVDVPRRVALIRG
Ga0066667_117758301	3300018433	Grasslands Soil	YLGARKPGYFHVLGGPIRAIRLIRRALRIYRGFPTGEPELFDNLARQLSIRFFRPEHYMIDGDILPPVERLDVDVACRVTLIRG
Ga0209108_105645142	3300025165	Soil	VERIALGFRPTYLGQRKRGYMHVLGGPVPATRLIRRAVRIYRGFPTHEPTLFDNLAQRGVIRFFRPEAWMLDGDILEPVERLAVEVAGRV
Ga0207645_111912911	3300025907	Miscanthus Rhizosphere	FFFSGTIERIALGFQPTYLGNRKRGFFHVLGGPIPARRLIAHGLRVYRGFPTGDPELYDNLGQRLSIRFKRPTHIMLDGDILEPADHVEVDVPLRVELIRS
Ga0207684_105387062	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	RPTYLGARKRGYMHVLGGPVRAVRLIRRVVRLYRGFPTGEPELFDNLAQRLSIRFFKPEHYMLDGDILPPAERLDVHVACRVTLIRG
Ga0207644_117850022	3300025931	Switchgrass Rhizosphere	GFKPTYLALRKRGYFHVVGGPIAARRLVRRAARVYRGFPTGEPDLYDNVGRRLSIRFKRPTHIMLDGDILDSCDTCEIDVPFRVTLVCG
Ga0207668_121228431	3300025972	Switchgrass Rhizosphere	TYLGNRKRGFFHVLGGPIPARRLIAHGLRVYRGFPTGDPELYDNLGQRLSIRFKRPTHIMLDGDILEPADHVEVDVPLRVELIRS
Ga0207702_106565981	3300026078	Corn Rhizosphere	FAATVDRIALGFRPTYLGTRKRGYMHVLGGPIPALRLIRRAVRIYRGFPTGEPTLFDNLARRTAIRFFRPEHWMLDGDILPPAENLEVDVACRVTLIRG
Ga0207648_113081971	3300026089	Miscanthus Rhizosphere	IPFRQFTFFFAATVDRIALCFRPTYLATRKRGYMHVLGGPVPATRLIRRVLRVFRGFPTGEPTLFDNLGKRLTIRFFRPEAFMIDGDILPPIDRLEVDVPCRVTLIRG
Ga0209268_11880071	3300026314	Soil	IRAIRLIRRALRIYRGFPTGEPELFDNLARQLSIRFFRPEHYMIDGDILPPVERLDVDVACRVTLIRG
Ga0209267_13253982	3300026331	Soil	KRGYMHVVGGPVPAMRLIRRAVRIYRGFPTNEPTLFDNLGSRVTIRFFRPEHYMLDGDILPPVERLDVDVACRVTFIRG
Ga0209803_13228861	3300026332	Soil	QFTFFFAATVDRIALGFRPTYLGARKPGYFHVLGGPIRAIRLIRRAVRIYRGFPTGEPELFDNLARQLTIHFFKPEHYMIDGDILPPAERLEVDVACRVTLIR
Ga0209159_11772671	3300026343	Soil	RKPGYFHVLGGPIRAIRLIRRALRIYRGFPTGEPELFDNLARQLSIRFFRPEHYMIDGDILPPVERLDVDVACRVTLIRG
Ga0209378_12337351	3300026528	Soil	ALGFRPTYLGARKPGYFHVLGGPIRAIRLIRRALRIYRGFPTGEPELFDNLARQLSIRFFRPEHYMIDGDILPPVERLDVDVACRVTLIRG
Ga0209378_12346612	3300026528	Soil	QFTFFFAATVDRIALGFRPTYLGARKPGYFHVLGGPISAIRLIRRAVRIYRGFPTGEAELFDNLARQLSIRFFKPEHYMIDGDILPPVGRLDVDVACRVTLIRG
Ga0209376_11876091	3300026540	Soil	FRPTYLGARKPGYFHVLGGPIRAIRLIRRAVRIYRGFPTGEPELFDNLARRLSIRFFRPEHYMIDGDILPPVERLDADVACRVTLIRG
Ga0299906_101637211	3300030606	Soil	GPIPPRRLIRRVVRIHRGLPTGEPTLYDNLGRHLEIRFERPVHYMLDGDILGPIERLEVDVPHRVRIVRG
Ga0307469_104818941	3300031720	Hardwood Forest Soil	LGFQPTYLGNRKRGFFHVIGGPVPARRLVRRVLRVYRGFPTGEPLLYDNLGQRLVIRFARPTHIMLDGDILDAVERCDVEVAFRVTLVCG
Ga0307468_1009437141	3300031740	Hardwood Forest Soil	RKRGYMHVLGGPATAVRLIRRVVRIYRGFPTGEPTLFDNLGRRLTIRFFRPESYMIDGDILPPIERLEVDVPCRVTLIRC
Ga0318554_101724571	3300031765	Soil	IEQIALGFQPTYLATRKRGYFHVLGGPIPARRLIRRAVRIYRGFPTGEPLLYDCIGKKLAIRFARPTHLMLDGDILEPTDRLEVDVPRRVALIRG
Ga0318529_103830212	3300031792	Soil	LGGPIPARRLIRRAVRIYRGFPTGEPLLYDSIGKKLSIRFARPTHLMLDGDILEPTERLEIDVPRRVALIRG
Ga0318495_104695242	3300031860	Soil	FHVLGGPIPARRLIRRAVRIYRGFPTGEPLLYDSIGKKLAIRFARPTHLMLDGDILDPTDRLEVDVPRRVALIRG
Ga0306926_115195921	3300031954	Soil	GGPIPARRLIRRAVRIYRGFPTGEPLLYDSIGKKLSIRFARPTHLMLDGDILEPTDRLEVDVPRRVALIRG
Ga0307416_1026193112	3300032002	Rhizosphere	YLALRKRGYFHVVGGPIAARRLVRRAARMYRGFPTGEPDLYDNMGRRLAIRFKRPTHIMLDGDILEPCDHCEVDVPFRVTLVCG
Ga0318533_105669941	3300032059	Soil	VLGGPIPARRLIRRAVRIYRGFPTGEPLLYDCIGKKLAIRFARPTHLMLDGDILEPTDRLEVDVPRRVALIRG
Ga0318553_100559762	3300032068	Soil	FHVLGGPIPARRLIRRAVRIYRGFPTGEPLLYDCIGKKLAIRFARPTHLMLDGDILEPTDRLEVDVPRRVALIRG
Ga0315287_127723111	3300032397	Sediment	TGTIERIALGFQPTYLGNRKRGFFHVLGGPIPARRLIRHGRKIYHGLPTGDPALYDNLGQRLVIRFARPTHIMLDGDILEPAERVEVDVPLRVELIRS
Ga0335071_106486861	3300032897	Soil	KRGFFHVVCGPIGARRLVRRALRVYRGFPTGEELLYDNLGQRLDVRFFRPAHWMLDGDILPEVDRLAVTVPRRVTMIRT
Ga0310914_117185212	3300033289	Soil	HVLGGPIPARRLIRRAVRIYRGFPTGEPLLYDSIGKKLSIRFARPTHLMLDGDILEPTERLEIDVPRRVALIRG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F087803

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences