Basic Information | |
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Family ID | F087755 |
Family Type | Metagenome |
Number of Sequences | 110 |
Average Sequence Length | 42 residues |
Representative Sequence | IRITSGKFGTDVKVSYKDFYNQLELCKLALQNYQHEIEVI |
Number of Associated Samples | 93 |
Number of Associated Scaffolds | 110 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 0.00 % |
% of genes near scaffold ends (potentially truncated) | 98.18 % |
% of genes from short scaffolds (< 2000 bps) | 90.00 % |
Associated GOLD sequencing projects | 86 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.39 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (86.364 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (39.091 % of family members) |
Environment Ontology (ENVO) | Unclassified (85.455 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (79.091 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60. |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 35.29% β-sheet: 11.76% Coil/Unstructured: 52.94% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.39 |
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Visualization |
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All Organisms Unclassified |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Visualization |
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Marine Deep Ocean Deep Subsurface Seawater Marine Sediment Aqueous Seawater Estuarine Marine Marine Pelagic Marine Seawater Pelagic Marine Marine Seawater Sediment Sediment Soil |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
DelMOSum2010_102570252 | 3300000101 | Marine | GTDVKVSYRDFYNQLENVKLALQNFKYEIEIITL* |
JGI24006J15134_100431615 | 3300001450 | Marine | QTIIRITSGKVEADIKVSYKDFYNQLELCKLALQDCKYNLEII* |
JGI24003J15210_101632471 | 3300001460 | Marine | VGTDIKLSYRDFYNQLENVKIALQNYKYETEIITL* |
JGI24004J15324_1000492414 | 3300001472 | Marine | IRIVSGKFGKDVKVSYKDFYNQLELCKLALQNYQHEIEVI* |
JGI24004J15324_100897501 | 3300001472 | Marine | VKTGKLETNVKVSYRDFYNQLENIKLALQDYKYTIKVT* |
Ga0070728_105150601 | 3300005588 | Marine Sediment | SGKFGKDVKVSYKDFYNQLELCKLALQNYQHEIEVI* |
Ga0070723_106336372 | 3300005612 | Marine Sediment | RIISGKFGTDVKVSYKDFYNQLELCKLALQNYQHEIEVI* |
Ga0075441_101840281 | 3300006164 | Marine | TIRIQSGKVGTDVKVSYRNFYNQLENVKLALQNFKYEIEIITL* |
Ga0098048_10780741 | 3300006752 | Marine | QTTIRIIAGKFGTDIKVSYKDFYNQLELCKLALQNYQHEIEVI* |
Ga0098044_12524782 | 3300006754 | Marine | IHDSSKHQTTIRIVSGKFGKDVKVSYKDFYSQLELCKLALQNYQHEIEVI* |
Ga0098044_13071531 | 3300006754 | Marine | TLRISSGKVEADVKVSYKDFYDQLEKCKFAMTDCKYNLEII* |
Ga0098044_13990772 | 3300006754 | Marine | HQTTIRISTGKLKIAGNVSYKDVYNQLELCKLALQNYQHEIEVI* |
Ga0098055_13411332 | 3300006793 | Marine | IIDSLNHQTTIRVTTGRFTVAVNVSYKDFYNQLENVKLALQDYQFEIEIV* |
Ga0098060_11674552 | 3300006921 | Marine | SGRIEYDVKVSYRDFYDQLEKCKFALTDCNYNLEII* |
Ga0098051_10733133 | 3300006924 | Marine | SGNVGVDIKVSYKDFYNQLELCKLALRDCNYNLEIL* |
Ga0098034_10118061 | 3300006927 | Marine | STGKFKIAVNVSYKDFYNQLELCKLALQNYQHEIEVI* |
Ga0098034_10798761 | 3300006927 | Marine | TTIRISTGKFKIAVNVSYKDFYNQLELCKLALQNYQHEIEVI* |
Ga0098034_12276502 | 3300006927 | Marine | RISTGKFKIAVNVSYKDFYNQLELCKLALQNYQHEIEVI* |
Ga0098041_11186131 | 3300006928 | Marine | LSGKFGTDIKVSYRDFYNQLELCKLALQNYQHEIEVI* |
Ga0070753_12563851 | 3300007346 | Aqueous | IFDSDKHQTTIRISCGKFGTDVKVSYREFYNKFELCKLALENYKYEIEVI* |
Ga0098052_10881511 | 3300008050 | Marine | NSSNHQTTIRITSGKFGTDIKVSYREFYNQLEICKLALQNYIHEIEVI* |
Ga0098052_11909071 | 3300008050 | Marine | TIRISTGKLGTDVKVSYKDFYNQLELCKLALQNYQHEIEVI* |
Ga0114910_12155432 | 3300008220 | Deep Ocean | IVSGKFGKDVKVSYKDFYNQLKLCKLALQNYQHEIEVI* |
Ga0114916_11298911 | 3300008221 | Deep Ocean | SEKEQVIIRIKSGKVGTDIKVSYRNFYNQLENVKIALQNFKYDIEIITL* |
Ga0115371_104017801 | 3300008470 | Sediment | SGKVGTDVKVSYRNFYNQLENVKLALQNFKYEIEIINL* |
Ga0115371_107342913 | 3300008470 | Sediment | QVIIRIKSGKVGTDVKVSYRNFYNQLENVKLALQNFKYEIEIITL* |
Ga0115371_110919812 | 3300008470 | Sediment | IQSGKVGTDVKVSYRNFYNQLENVKLALQNFKYEIEIINL* |
Ga0102813_11367252 | 3300009003 | Estuarine | KFGVDLKVSYREFYNKFELCKLALQNYKYEIEVI* |
Ga0102826_10435171 | 3300009054 | Estuarine | IHDSRTHQTTIRITSGKFGTDVKVSYKDFYNQLELCKLALQNYQHEIEVI* |
Ga0102815_102719553 | 3300009080 | Estuarine | DSRTHQTTIRITSGKFGTDIKVSYKDFYNQLELCKLALQNYQHEIEVI* |
Ga0102884_10729932 | 3300009141 | Estuarine | SDKHQTTIRISCGKFGADIKVSYREFYNKFELCKLALQNYQHEIEVI* |
Ga0114903_10670571 | 3300009412 | Deep Ocean | TIRIVSGKFGKDVKVSYKDFYNQLELCKSALQNYQHEIEVI* |
Ga0114909_11679882 | 3300009414 | Deep Ocean | IRVKSGKVEADVKVSYKDFYDQLEKCKFAMTDCNYNLEII* |
Ga0114994_101722851 | 3300009420 | Marine | TTIRISTGRFKIAVNVSYKDFYNQLELCKLALQNYQYEIEVI* |
Ga0114994_107223641 | 3300009420 | Marine | QTTIRISTGRFKIAVNVSYKDFYNQLELCKLALQNYQYEIEII* |
Ga0115564_105444281 | 3300009505 | Pelagic Marine | VSGKFGKDVKVSYKDFYNQLELCKLALQNYQHEIEVI* |
Ga0114900_11627431 | 3300009602 | Deep Ocean | SSKHQTTIRIVSGKFGKDVKVSYKDFYKQLKLCKLALQNYQHEIEVI* |
Ga0114911_10576991 | 3300009603 | Deep Ocean | NSDKHQTTIRISCGKFGTDIKVSYREFYNKFELCKLALQNYQHEIEVI* |
Ga0114911_11126161 | 3300009603 | Deep Ocean | NSDKHQTTIRISCGKFGTDIKVSYREFYNKFELCKLALQNYKYEIEVI* |
Ga0114901_12072011 | 3300009604 | Deep Ocean | SSKHQTTIRIVSGKFGKDVKVSYKDFYNQLKLCKLALQNYQHEIEVI* |
Ga0115001_105110931 | 3300009785 | Marine | EVGTDVKVSFRDFYNQLENVKLALQNFKYEIEIITL* |
Ga0098049_10031301 | 3300010149 | Marine | IKITSGNVGVDIKVSYKDFYNQLELCKLALRDCNYNLEIL* |
Ga0098056_11422531 | 3300010150 | Marine | RFTVAVNVSYKDFYNQLENVKLALQDYQFEIEIV* |
Ga0098061_12315341 | 3300010151 | Marine | GGFGTDIKVSYRNFYNQLELCKLALQDYQFEIEIV* |
Ga0118733_1065011462 | 3300010430 | Marine Sediment | LKHQTTIRISTGKFMIAVNVSYKDFYNQLELCKLALQNYQHEIEVI* |
Ga0133547_112095041 | 3300010883 | Marine | GRFKIAVNVSYKDFYNQLELCKLALQNYQYEIEVI* |
Ga0114922_106096541 | 3300011118 | Deep Subsurface | QTTIRIVSGQFGKDVKVSYKDFYNQLELCKLALQNYQHEIEVI* |
Ga0181367_10404611 | 3300017703 | Marine | KNGIHDSSKHQTTIRISTGKFKIAVNVSYKDFYNQLELCKLALQNYQHEIEVI |
Ga0181377_10696241 | 3300017706 | Marine | NGIHDSSKHQTTIRISTGKLGTDVKVSYKDCYNQLELCKLALQNYQHEIEVI |
Ga0181388_11377892 | 3300017724 | Seawater | GKFGKDVKVSYKDFYNQLELCKLALQNYQHEIEVI |
Ga0181398_10813611 | 3300017725 | Seawater | HDSRTHQTTIRITSGKFGTDIKVSYKDFYNQLELCKLALQNYQHEIEVI |
Ga0181426_10292331 | 3300017733 | Seawater | IVSGKFGKDVKVSYKDFYNQLELCKLALQNYQHEIEVI |
Ga0181399_11774911 | 3300017742 | Seawater | TTIRIVSGKFGTDIKVSYKDFYNQLELCKLALQNYQHEIEVI |
Ga0181397_11592972 | 3300017744 | Seawater | KHQTTIRISTGKFKIAINVSYKDFYNQLELCKLALQNYQHEIEVI |
Ga0181389_11727292 | 3300017746 | Seawater | DKHQTTIRIVSGKFGKDVKVSYKDFYNQLELCKLALQNYQHEIEVI |
Ga0181405_10815443 | 3300017750 | Seawater | IRIVSDKFGTDIKVSYRDFYNQLELCKLALQNYQHEIEVI |
Ga0187219_10923841 | 3300017751 | Seawater | SKKHQTTIRISCGKFNTDVKVSYREFYNKFELCKLALQNYKYEIEVI |
Ga0181382_11247772 | 3300017756 | Seawater | ITSGKVETDVKVSYKDFYKQLENCKLALVDCNYNLEII |
Ga0181420_10861091 | 3300017757 | Seawater | IHDSSKHQTTIRIVSGKFGKDVKVSYKDFYNQLKLCKLALQNYQHEIEVI |
Ga0181413_10624691 | 3300017765 | Seawater | TTIRIVSGKFGTDVKVSYKDFYNQLELCKLALQNYQHEIEVI |
Ga0181413_11542062 | 3300017765 | Seawater | FDSHKHQTTIRISCGKFRTDIKVSYREFDNKFELCKLALQNYKYEIEVI |
Ga0181413_11836092 | 3300017765 | Seawater | RISCGKFRTDIKVSYREFDNKFELCKLALKNYKYEIEVI |
Ga0181430_10137607 | 3300017772 | Seawater | HDSRTHQTTIRITSGKFGTDVKVSYKDFYNQLELCKLALQNYQHEIEVI |
Ga0181386_11414712 | 3300017773 | Seawater | RIVSGKFGKDVKVSYKEFYNQLKLCKLALQNYQHEIEVI |
Ga0181423_11435641 | 3300017781 | Seawater | GKFGVDLKVSYREFYNKFELCKLALQNYKYEIEVI |
Ga0181424_102303851 | 3300017786 | Seawater | QTTIRISCGKFGANIKVSYREFYNKFELCKLALQNYKYEIEVI |
Ga0206124_101713381 | 3300020175 | Seawater | ISCGKFGTDVKVSYREFYNKFELCKFALQNYKYEIEVI |
Ga0206685_102198232 | 3300021442 | Seawater | TSGRSKVDIKVSYKDFYHQLELCKFALTDCNYNLEII |
Ga0196889_10674222 | 3300022072 | Aqueous | KRYLKDNDIYDSKKHQTTIRISCGKFGVDIKVSYREFYNKFELCKLALQNYKYEIEVI |
Ga0196887_10576973 | 3300022178 | Aqueous | SVKHQVTIRIKSGDVGTDIKVSYRDFYNQLENVKLALQNFKYEIEIITL |
Ga0224503_101526741 | 3300022201 | Sediment | SCGKFGVDLKVSYREFYNKFELCKLALQNYKYEIEVI |
Ga0224513_101567221 | 3300022220 | Sediment | HDSSKHQTTIRISTGKFKIAVNVSYKDFYNQLELCKLALQNYQHEIEVI |
(restricted) Ga0233412_103709101 | 3300023210 | Seawater | IRITSGKFGTDVKVSYKDFYNQLELCKLALQNYQHEIEVI |
(restricted) Ga0255050_101530991 | 3300024052 | Seawater | ISCGKFGADVKVSYREFYNKFELCKLALQNYKYEIEVI |
(restricted) Ga0255044_104937602 | 3300024529 | Seawater | NDVVHSSKHQVTIRIQSGKVGTDIKVSFRNFYNQLENIKLALQNFKYDIEIITL |
Ga0208668_10286481 | 3300025078 | Marine | STGKFKIAVNVSYKDFYNQLELCKLALQNYQHEIEVI |
Ga0208791_10721202 | 3300025083 | Marine | TIKITSGNVGVDIKVSYKDFYNQLELCKLALRDCNYNLEIL |
Ga0208010_10368451 | 3300025097 | Marine | ISTGKFKIAVNVSYKDFYNQLELCKLALQNYQHEIEVI |
Ga0208793_11577362 | 3300025108 | Marine | STGKLGTDVKVSYKDFYNQLELCKLALQNYQHEIEVI |
Ga0208553_11137322 | 3300025109 | Marine | QTTIRISTGKFKIAVNVSYKDFYNQLELCKLALQNYQHEIEVI |
Ga0208158_10259035 | 3300025110 | Marine | GNVGVDIKVSYKDFYNQLELCKLALRDCNYNLEIL |
Ga0208158_10759552 | 3300025110 | Marine | SGKFGTDIKVSYRDFYNQLELCKLALQNYQHEIEVI |
Ga0209348_10700591 | 3300025127 | Marine | AKHQTTIRITSGKLRKDIKVSYRDFYNQLELCKLALQNYIHEIKVI |
Ga0209128_101458611 | 3300025131 | Marine | TTIRVTSGGFGTDIKVSYRNFYNQLELCKLALQDYQFEIEIV |
Ga0209128_10200121 | 3300025131 | Marine | RVTSGGFGTDIKVSYRNFYNQLELCKLALQDYQFEIEIV |
Ga0209128_11318761 | 3300025131 | Marine | TTIRIVSGKFGKDVKVSYKDFYNQLELCKLALQNYQHEIEVI |
Ga0209232_10509064 | 3300025132 | Marine | TTIRITSGKLRKDIKVSYRDFYNQLELCKLALQNYIHEIKVI |
Ga0209336_101314951 | 3300025137 | Marine | SGKVGTDIKLSYRDFYNQLENVKIALQNYKYETEIITL |
Ga0209337_10825825 | 3300025168 | Marine | KSGKVGTDIKVSYRNFYNQLENVKLALQNFKYEIEIITL |
Ga0209337_11489843 | 3300025168 | Marine | TIRIVSGKFGTDIKVSYKDFYNQLELCKLVLQNYQHEIEVI |
Ga0209337_11625473 | 3300025168 | Marine | GKVEADIKVSYKDFYEQLEKCKFALTDCNYNLEIIND |
Ga0208031_10489921 | 3300025237 | Deep Ocean | SIRIQSGEVGTDIKVSFRDFYNQLENVKLALQNFKYEIEIITL |
Ga0208180_11055382 | 3300025277 | Deep Ocean | QTTIRIVSGKFGKDVKVSYKDFYKQLKLCKLALQNYQHEIEVI |
Ga0208181_10629251 | 3300025300 | Deep Ocean | TIRIVSGKFGKDVKVSYKDFYKQLKLCKLALQNYQHEIEVI |
Ga0209335_102358592 | 3300025894 | Pelagic Marine | IFDSDKHQTTIRISCGKFGTDVKVSYREFYNKFELCKFALQNYKYEIEVI |
Ga0209815_12428292 | 3300027714 | Marine | LKDYLRKNDVVNSEKHQVTIRIQSGKVGTDIKVSYRNFYNQLENIKLALQNFKYDIEIIT |
Ga0209379_100141669 | 3300027758 | Marine Sediment | HQVSIRIQSGDVGTDVKVSYRDFYNQLENVKLALQNFKYEIEVITL |
Ga0209091_103258491 | 3300027801 | Marine | QTSIRIKSGKVGTDVKVSYRDFYNQLELCKLALQDYKFEIEII |
(restricted) Ga0233415_100141978 | 3300027861 | Seawater | TIRIVSGKFGTDIKVSYKDFYNQLELCKLALQNYQHEIEVI |
(restricted) Ga0233413_100870933 | 3300027996 | Seawater | GKYGKDVKVSYKDFYNQLELCKLALQNYQHEIEVI |
Ga0308025_12946921 | 3300031143 | Marine | QSGEVGTDIKVSYRDFYNQLENVKLALQNFKYEIEIINL |
Ga0307999_11478102 | 3300031608 | Marine | VFNSEKEQVIIRIKSGKVGTDVKVSYRNFYNQLENVKLALQNFKYDIEIITL |
Ga0308009_103486071 | 3300031612 | Marine | DYLRKNDVVNSEKKQVIIRIKSGKVGTDIKVSYRNFYNQLENIKLALQNFKYEVEIITL |
Ga0308005_100364434 | 3300031656 | Marine | VIIRIKSGKVGTDIKVSYRNFYNQLENIKLALQNFKYEVEIITL |
Ga0307984_12072832 | 3300031658 | Marine | RIVAEVKLSYKDFYNQLEMIKLALENFQYETEIITL |
Ga0307375_103298981 | 3300031669 | Soil | NHQTIIRITSGKVGTDVKVSYKDFYNQLENCKLALQNCNYNLEII |
Ga0308011_102564492 | 3300031688 | Marine | SEKHQVIIRIQSGKVGTDVKVSYRNFYNQLENVKLALQNFKYDIEIITL |
Ga0307998_10313137 | 3300031702 | Marine | VSIRIQSGEVGTDIKVSYRDFYNQLENVKLALQNFKYEIEIINL |
Ga0315326_102779553 | 3300031775 | Seawater | SGRVEYDVKVSYKDFYNQLEKCKFAMTDCNYNLEII |
Ga0315321_107433162 | 3300032088 | Seawater | DSEKHQTTIRISCGKFGVDIKVSYREFYNKFELCKLALQNYKYEIEVI |
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