NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F087628

Metagenome Family F087628

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F087628
Family Type Metagenome
Number of Sequences 110
Average Sequence Length 102 residues
Representative Sequence MMVTVSELEAIIAETPPGEQVQYETRLIGSVDDVTRKLTELKLSRSGDPDYLIFVGVDRFGECFLAAFSTIGDPLEFRARHQKQFDRATKGLLPAGILPRDHEGNYSSG
Number of Associated Samples 92
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 64.55 %
% of genes near scaffold ends (potentially truncated) 30.91 %
% of genes from short scaffolds (< 2000 bps) 84.55 %
Associated GOLD sequencing projects 86
AlphaFold2 3D model prediction Yes
3D model pTM-score0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (65.455 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(31.818 % of family members)
Environment Ontology (ENVO) Unclassified
(34.545 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(53.636 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 28.47%    β-sheet: 18.98%    Coil/Unstructured: 52.55%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.57
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 110 Family Scaffolds
PF00313CSD 29.09
PF00216Bac_DNA_binding 3.64
PF07589PEP-CTERM 1.82
PF00589Phage_integrase 1.82
PF03118RNA_pol_A_CTD 0.91
PF01548DEDD_Tnp_IS110 0.91
PF07813LTXXQ 0.91
PF00365PFK 0.91
PF04828GFA 0.91
PF05163DinB 0.91
PF00816Histone_HNS 0.91
PF00691OmpA 0.91
PF13276HTH_21 0.91
PF06035Peptidase_C93 0.91
PF12244DUF3606 0.91

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 110 Family Scaffolds
COG0776Bacterial nucleoid DNA-binding protein IHF-alphaReplication, recombination and repair [L] 3.64
COG3678Periplasmic chaperone Spy, Spy/CpxP familyPosttranslational modification, protein turnover, chaperones [O] 3.64
COG0202DNA-directed RNA polymerase, alpha subunit/40 kD subunitTranscription [K] 0.91
COG02056-phosphofructokinaseCarbohydrate transport and metabolism [G] 0.91
COG2318Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)Secondary metabolites biosynthesis, transport and catabolism [Q] 0.91
COG2916DNA-binding protein H-NSTranscription [K] 0.91
COG3547TransposaseMobilome: prophages, transposons [X] 0.91
COG3672Predicted transglutaminase-like proteinPosttranslational modification, protein turnover, chaperones [O] 0.91
COG3791Uncharacterized conserved proteinFunction unknown [S] 0.91

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms65.45 %
UnclassifiedrootN/A34.55 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001593|JGI12635J15846_10129741All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1766Open in IMG/M
3300002245|JGIcombinedJ26739_100407781Not Available1238Open in IMG/M
3300002245|JGIcombinedJ26739_100611857All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae967Open in IMG/M
3300002886|JGI25612J43240_1006321All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1663Open in IMG/M
3300002917|JGI25616J43925_10013608All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3590Open in IMG/M
3300002917|JGI25616J43925_10044860All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1928Open in IMG/M
3300005167|Ga0066672_10194280All Organisms → cellular organisms → Bacteria1291Open in IMG/M
3300005174|Ga0066680_10350594All Organisms → cellular organisms → Bacteria941Open in IMG/M
3300005177|Ga0066690_10095841All Organisms → cellular organisms → Bacteria1899Open in IMG/M
3300005178|Ga0066688_10787611Not Available596Open in IMG/M
3300005445|Ga0070708_100282827All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1561Open in IMG/M
3300005458|Ga0070681_10049772All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium4183Open in IMG/M
3300005536|Ga0070697_100999090Not Available744Open in IMG/M
3300005553|Ga0066695_10607790All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga655Open in IMG/M
3300005555|Ga0066692_10261393All Organisms → cellular organisms → Bacteria1094Open in IMG/M
3300005586|Ga0066691_10647878Not Available627Open in IMG/M
3300006173|Ga0070716_101316028Not Available585Open in IMG/M
3300006800|Ga0066660_11017808All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga664Open in IMG/M
3300006949|Ga0075528_10037663All Organisms → cellular organisms → Bacteria → Proteobacteria1237Open in IMG/M
3300006949|Ga0075528_10112706All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium720Open in IMG/M
3300006950|Ga0075524_10028092All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2250Open in IMG/M
3300007788|Ga0099795_10201025All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283840Open in IMG/M
3300007788|Ga0099795_10270478All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria739Open in IMG/M
3300009029|Ga0066793_10160635All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1310Open in IMG/M
3300009029|Ga0066793_10543797Not Available663Open in IMG/M
3300009029|Ga0066793_10555575All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.655Open in IMG/M
3300009088|Ga0099830_10479820All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga1013Open in IMG/M
3300009137|Ga0066709_100339405All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga2059Open in IMG/M
3300011269|Ga0137392_10735884All Organisms → cellular organisms → Bacteria816Open in IMG/M
3300011999|Ga0120148_1037099All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT02831024Open in IMG/M
3300012189|Ga0137388_10366908All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1330Open in IMG/M
3300012200|Ga0137382_10779228All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga687Open in IMG/M
3300012202|Ga0137363_10098911All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2213Open in IMG/M
3300012202|Ga0137363_10907314Not Available748Open in IMG/M
3300012202|Ga0137363_11598775All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga544Open in IMG/M
3300012205|Ga0137362_11146770Not Available660Open in IMG/M
3300012208|Ga0137376_10761309Not Available834Open in IMG/M
3300012285|Ga0137370_10172767Not Available1258Open in IMG/M
3300012349|Ga0137387_10781557All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga691Open in IMG/M
3300012351|Ga0137386_10446811All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria931Open in IMG/M
3300012361|Ga0137360_10176689All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1713Open in IMG/M
3300012362|Ga0137361_10257590All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga1590Open in IMG/M
3300012363|Ga0137390_10669425All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1002Open in IMG/M
3300012683|Ga0137398_10402796All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria931Open in IMG/M
3300012683|Ga0137398_10863996All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei631Open in IMG/M
3300012685|Ga0137397_10470919All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria936Open in IMG/M
3300012917|Ga0137395_10216091Not Available1339Open in IMG/M
3300012918|Ga0137396_10854001All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283668Open in IMG/M
3300012922|Ga0137394_11508076Not Available531Open in IMG/M
3300012923|Ga0137359_11468149Not Available570Open in IMG/M
3300012929|Ga0137404_10797284All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria858Open in IMG/M
3300012929|Ga0137404_11708605All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei585Open in IMG/M
3300012930|Ga0137407_11029066Not Available780Open in IMG/M
3300012944|Ga0137410_11707376Not Available554Open in IMG/M
3300012960|Ga0164301_10301918All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1078Open in IMG/M
3300012960|Ga0164301_11586718Not Available542Open in IMG/M
3300012984|Ga0164309_10717630Not Available795Open in IMG/M
3300012986|Ga0164304_10256228All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1176Open in IMG/M
3300012988|Ga0164306_11442571Not Available587Open in IMG/M
3300012989|Ga0164305_10681879Not Available837Open in IMG/M
3300013768|Ga0120155_1137167All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283668Open in IMG/M
3300013772|Ga0120158_10070212All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2265Open in IMG/M
3300014501|Ga0182024_10232770All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei2486Open in IMG/M
3300015053|Ga0137405_1161597All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria949Open in IMG/M
3300015053|Ga0137405_1214624All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga895Open in IMG/M
3300015241|Ga0137418_10315254All Organisms → cellular organisms → Bacteria1303Open in IMG/M
3300015264|Ga0137403_10523502All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga1055Open in IMG/M
3300018054|Ga0184621_10233527All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei658Open in IMG/M
3300018071|Ga0184618_10492918Not Available514Open in IMG/M
3300019887|Ga0193729_1152135All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283835Open in IMG/M
3300019887|Ga0193729_1242173All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei579Open in IMG/M
3300019888|Ga0193751_1011700All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae4589Open in IMG/M
3300019888|Ga0193751_1018358All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3501Open in IMG/M
3300020002|Ga0193730_1193341Not Available503Open in IMG/M
3300020140|Ga0179590_1160822All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria615Open in IMG/M
3300021078|Ga0210381_10052021Not Available1230Open in IMG/M
3300021171|Ga0210405_10012752All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae7019Open in IMG/M
3300021559|Ga0210409_11573374Not Available533Open in IMG/M
3300022694|Ga0222623_10026367All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2191Open in IMG/M
3300024288|Ga0179589_10446423Not Available596Open in IMG/M
3300024288|Ga0179589_10501805All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Rhodoferax → unclassified Rhodoferax → Rhodoferax sp.563Open in IMG/M
3300025457|Ga0208850_1025101All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT02831045Open in IMG/M
3300025495|Ga0207932_1079813Not Available675Open in IMG/M
3300025852|Ga0209124_10228301Not Available725Open in IMG/M
3300025888|Ga0209540_10072795All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae2116Open in IMG/M
3300025888|Ga0209540_10481242Not Available657Open in IMG/M
3300025912|Ga0207707_10042949All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3945Open in IMG/M
3300025915|Ga0207693_11291650Not Available546Open in IMG/M
3300026277|Ga0209350_1047689All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1246Open in IMG/M
3300026285|Ga0209438_1199337Not Available533Open in IMG/M
3300026319|Ga0209647_1034143All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2937Open in IMG/M
3300026490|Ga0257153_1023264All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1273Open in IMG/M
3300026548|Ga0209161_10403391Not Available601Open in IMG/M
3300026551|Ga0209648_10149366All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1847Open in IMG/M
3300026551|Ga0209648_10334582All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 1901055Open in IMG/M
3300027480|Ga0208993_1109665Not Available504Open in IMG/M
3300027521|Ga0209524_1050636Not Available876Open in IMG/M
3300027565|Ga0209219_1094994All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae736Open in IMG/M
3300027603|Ga0209331_1006708All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3093Open in IMG/M
3300027645|Ga0209117_1020789All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae2122Open in IMG/M
3300027660|Ga0209736_1026935All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1726Open in IMG/M
3300028047|Ga0209526_10061290All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2648Open in IMG/M
3300028718|Ga0307307_10086970Not Available943Open in IMG/M
3300028793|Ga0307299_10146194Not Available889Open in IMG/M
3300028814|Ga0307302_10340059Not Available740Open in IMG/M
3300028824|Ga0307310_10115948All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1206Open in IMG/M
3300028824|Ga0307310_10137846Not Available1117Open in IMG/M
3300028885|Ga0307304_10499035Not Available558Open in IMG/M
3300029945|Ga0311330_10906279Not Available659Open in IMG/M
3300032180|Ga0307471_100306893All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. M1D.F.Ca.ET.043.01.1.11677Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil31.82%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil15.45%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil9.09%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil8.18%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil8.18%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil7.27%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.64%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost2.73%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.73%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil2.73%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.82%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.82%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.91%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.91%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.91%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.91%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog0.91%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300002886Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cmEnvironmentalOpen in IMG/M
3300002917Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cmEnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006949Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-16BEnvironmentalOpen in IMG/M
3300006950Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-oneEnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009029Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011999Permafrost microbial communities from Nunavut, Canada - A28_65cm_6MEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013768Permafrost microbial communities from Nunavut, Canada - A35_65cm_0MEnvironmentalOpen in IMG/M
3300013772Permafrost microbial communities from Nunavut, Canada - A10_80_0.25MEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015053Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300019887Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2EnvironmentalOpen in IMG/M
3300019888Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2EnvironmentalOpen in IMG/M
3300020002Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1EnvironmentalOpen in IMG/M
3300020140Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redoEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300025457Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025495Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025852Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-22A (SPAdes)EnvironmentalOpen in IMG/M
3300025888Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)EnvironmentalOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026277Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026319Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)EnvironmentalOpen in IMG/M
3300026490Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-AEnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027480Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027521Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027565Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027603Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027645Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027660Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028718Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300029945I_Bog_N2 coassemblyEnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12635J15846_1012974123300001593Forest SoilMINVSELEAIIAQAPPGEPVQYEAKPIGSVDYVTRKLTELKLSRSSDPDYLIFVGIDRFGECFLAPFSTIGDPLEFRARHERRLDRASERLFPPSMSRLGEQG*
JGIcombinedJ26739_10040778113300002245Forest SoilMINVSELEAIIAQAPPGEPVQYEAKPIGSVDDVTRKLTELKLSRSSDPDYLIFVGIDRFGECFLAPFSTIGDPLEFRARHERRLDRASERLFPPSMSRLGEQG*
JGIcombinedJ26739_10061185733300002245Forest SoilMITVSELEAIIAQTPPGKQVQYETKLIGSVDNVTRKLTDLKLSRGGDLDYLICVGLDRFGECFLAAFSTIGDPLEFRARHEKQLDRATRGLFPVGMSSRPT*
JGI25612J43240_100632123300002886Grasslands SoilVQYEGEPIDAVEQVTRKLTELKLKRASDPDYLIFVGIDRVGECFFAAFSTMGDPREFRARHDKRLDRAAEGLLPGGMSPRPT*
JGI25616J43925_1001360823300002917Grasslands SoilMLITVSELEAIIAQTSPGEQVQYEAKPIGSVDHVSRKLTELKLSRGSDPYYLIFVGLDRSGECFLAAFSTIGDPLEFRXRHEKQLDRATKGLFPTGASARQT*
JGI25616J43925_1004486013300002917Grasslands SoilMMITVSELEAIIVQAPPGEQVQYETKLIGSVDHVTKKLTELKLSRGSDVDYLIFVGLDRFGECFLAAFSTIGDPLEFRARHEKQLDRATKGLFPAGMSSRPT*
Ga0066672_1019428013300005167SoilFDMMVTVLELEAIIAETPPGEQVQYETRLIGSVDDVTRKLTELKLNRSGDPDYLIFVGVDRFGECFLAAFSTIGDPLEFRARHQKQFDRATKGLLPAGILPRDHEGNYSSG*
Ga0066680_1035059413300005174SoilMMVTVSELEAIIAETPPGEQVQYETRLIGSVDDVTRKLTELKLNRSGDPDYLIFVGVDRFGECFLAAFSTIGDPLEFRARHQKQFDRATKGLLPAGILPRDHEGNYSSG*
Ga0066690_1009584113300005177SoilMVTVSELEAIIAETPPGEQVQYETRLIGSVDDVTRKLTELKLNRSGDPDYLIFVGVDRFGECFLAAFSTIGDPLEFRARHQKQFDRATKGLLPAGILPRDHEGNYSSG*
Ga0066688_1078761113300005178SoilMMVTVSELEAIIAETPPGEQVQYETRLIGSVDDVTRKLTELKLSRSGDPDYLIFVGVDRFGECFLAAFSTIGDPLEFRARHQKQFDRATKGLLPAGILPRDHEGNYSSG*
Ga0070708_10028282713300005445Corn, Switchgrass And Miscanthus RhizosphereMMVTVSELEAIIAETPPGEQVQYETRLIGSVDDVTRKLTELKLSRSGDPDYLIFVGVDRFGECFLAAFSTIGDPLEFRARRQKQLAYCRTTMRAIIARAEG*
Ga0070681_1004977223300005458Corn RhizosphereMMVTVSELEAVIAQTPSGEQVQFDTKLIGSVDHVTRKLTALKLNRSGDPDYLIFVGLDRFGECFLAAFSTIGDPLEFRARHERQLDRATQGLLPIGLSPRDDGRIISSAAEGEKGK*
Ga0070697_10099909023300005536Corn, Switchgrass And Miscanthus RhizosphereMVTVSELEAIIAETPPGEQVQYETRLIGSVDDVTRKLTELKLSRSGDPDYLIFVGVDRFGECFLAAFSTIGDPLEFRARRQKQLAYCRTTMRAIIARAEG*
Ga0066695_1060779033300005553SoilMMVTVSELEAIIAETPPGEQVQYETRLIGSVDDVTRKLTELKLSRSGDPDYLIFVGVDRFGECFLAAFSTIGDPLEFRARRQKQL
Ga0066692_1026139333300005555SoilMVTVSELEAIIAETPPGEQVQYETRLIGSVDDVTRKLTELKLNRSGDPDYLIFVGVDRLGECFLAAFSTIGDPLEFRARHQKQFDRATKGLLPAGILPRDHEGNYSSG*
Ga0066691_1064787823300005586SoilWPPGRQRGNRDFDMMVTVSELEAIIAETPPGEQVQYETRLIGSVDDVTRKLTELKLNRSGDPDYLIFVGVDRFGECFLAAFSTIGDPLEFRARHQKQFDRATKGLLPAGILPRDHEGNYSSG*
Ga0070716_10131602823300006173Corn, Switchgrass And Miscanthus RhizosphereMMVTVSELEAIIAETPPGEQVQYETRLIGSVDDVTRKLTELKLSRSGDPDYLIFVGVDRFGECFLAAFSTIGDPLEFRARRQKQLAYCRTTMRAIIVRAEG*
Ga0066660_1101780813300006800SoilMVTVSELEAIIAETPPGEQVQYETRLIGSVDDVTRKLTELKLSRSGDPDYLIFVGVDRFGECFLAAFSTIGDPLEFRARHQKQFDRATKGLLPAGILPRDQEGNYRSG*
Ga0075528_1003766343300006949Arctic Peat SoilMITVSELEAIIAQTPADEQVLYEAKPIGSVDHVTRKLTELKLSRTSDPEYLIFVGLDRFGECFLAAFSTIGDPLEFRTRHEKQLGPATERLFPAGITRLT*
Ga0075528_1011270613300006949Arctic Peat SoilELEAIIAQTPPGEHVRYDAKPIGSVDHVTRKLTELKLSRSSDPDYLIFVGLDRFGECFLAAFSTVGDPLEFRARHEKQLDRATKGLLPTGTLTRPA*
Ga0075524_1002809243300006950Arctic Peat SoilMITVLELEAIIAQTPPGEHVRYDATPIGSVDHVTRKLTELKLSRSSDPDYLIFVGLDRFGECFLAAFSTVGDPLEFRARHEKQLDRATKGLLPTGTLTRPA*
Ga0099795_1020102513300007788Vadose Zone SoilMMVTVSELEAVIAQTPSGEQVQFDTKLIGSVDHVTRKLTELKLNRSGDTDYLIFVGLDRFGECFLAAFSTIGDPLEFRARHEKQLDRATQGLLPIDLLPRDDGGIISSAAEGEKGK*
Ga0099795_1027047823300007788Vadose Zone SoilMMVTVSELEAIIAETPPGEQVQYETRLIGSVDDVTRKLTELKLSRSGDPDYLIFVGVDRLGECFLAAFSTIGDPLEFRARHQKQFDRATKGLLPSGILRREHEDNYSSG*
Ga0066793_1016063523300009029Prmafrost SoilMMVTVSELEAVIAQTPSGEQVQFDTKLIGSVDHVTRKLTELKLNRSGDPDYLIFVGLDRFGECFLAAFSTIGDPLEFRARHEKQLDRATQGLLPIGLLPRDDGGIISSAAEGEKGK*
Ga0066793_1054379713300009029Prmafrost SoilMMITVSELEELIAQTPDGEQVQFETKSIGSVEHVTRKLTELKLSRSHDPHYLIFVGLDRFGECTLIAFATIGDPLEFRSRHQLNLKVGDG*
Ga0066793_1055557513300009029Prmafrost SoilMMITVSELEAIIAQTPADEQVLYETKPIGSVDHVTRKLTELKLNRTSDPEYLIFVGLDRFGECFLVAFSTIGDPLEFRTRHEKQLGPATDGLFPAGITRLT*
Ga0099830_1047982023300009088Vadose Zone SoilMMVTVSELEAIIAETPPGEQVQYETRLIGSVDDVTRKLTELKLSRSGDPDYLIFVGVDRFGECFLAAFSTIGDPLEFRARHQKQFDRATKGLLPPGILPRDHEGNYSSG*
Ga0066709_10033940533300009137Grasslands SoilMMVTVSELEAIIAETPPGEQVQYETRLVGSVDDVTRKLTELKLNRSGDPDYLIFVGVDRFGECFLAAFSTIGDPLEFRARHQKQFDRATKGLLPAGILPRDHEGNYSSG*
Ga0137392_1073588423300011269Vadose Zone SoilMMVTVSELEAVIAQTPSGEQVQFDTKLIGSVDHVTRKLTELKLNRSGDPDYLIFVGLDRFGECFLAAFSTIGDPLEFRARHEKQLDRAAQGLLPIGLLPRDDGGVISSAAEGEKGK*
Ga0120148_103709933300011999PermafrostMMVTVSELEAVIAQTPFGEQVQFDTRLIGSVDHVIRKLTELKLNRSGDNDYLIFVGLDRFGECFLAAFSTIGDPLEFRARHEKQLDRATQGLLPIGLLPGDDGGIISSAAEGEKGK*
Ga0137388_1036690833300012189Vadose Zone SoilMMVTVSELEAIIAETPPGEQVQYETRLIGSVDDVTRKLTELKLSRSGDSDYLIFVGVDRFGECFLAAFSTIGDPLEFRARHQKQFDRATKGLLPPGILPRDHEGNYSPG*
Ga0137382_1077922823300012200Vadose Zone SoilMMVTVSELEAIIAETPPGEQVQYETRLIGSVDDVTRKLTELKLNRSGDPDYLIFVGVDRFGECFLAAFSTIGDPLEFRARHHKQFDRATKGLLPAGILPRDHEGNYSSG*
Ga0137363_1009891143300012202Vadose Zone SoilVQYEGEPIDAVEQVTRKLTELKLKRASDPDYLIFVGIDRVGECFFAAFSTMGDPREFRARHDKQLDRAAEGLLPGGMSPRPT*
Ga0137363_1090731413300012202Vadose Zone SoilMMITVSELEELIARTPDGEQVQFETKSIGSTEHVTRKLNELRSSRSHDPHNLTFVGLGRFEGCLLIPFSTFGRPVEFRSRRRP*
Ga0137363_1159877523300012202Vadose Zone SoilMMVTVSELEAIIAETPPGEQVQYETRLIGSVDDVTRKLTELKLSRSGDPDYLIFVGVDRFGECFLAAFSTIGDPLEFRARRQ
Ga0137362_1114677013300012205Vadose Zone SoilVQYEGEPIDAVEQVTRKLTQLKLKRASDPDYLIFVGVDRVGECFFAAFSTMGDPQEFRARHDKRLDRAAEGLLPGGMSPRPT*
Ga0137376_1076130913300012208Vadose Zone SoilDFDMMVTVSELEAIIAETPPGEQVQYETRLIGSVDDVTRKLTELKLSRSGDPDYLIFVGVDRFGECFLAAFSTIGDPLEFRARHQKQFDRATKGLLPAGILPRDHEGNYSSG*
Ga0137370_1017276713300012285Vadose Zone SoilMVTVSELEAIIAQTPSGEQVQYESKPIGAVDHVTRKLTELKLKRSSDPDYLIFVGVDRLGECFLAAFSTIGDPLEFRARHQKQFDRATKGLLPAGILPRDHEGNYSSG*
Ga0137387_1078155713300012349Vadose Zone SoilMMVTVSELEAIIAETPPGEQVQYETRLIGSVDDVTRKLTELKLSRSGDPDYLIFVGVDRFGECFLAAFSTIGDPLELRARRQKQLAYCRATMRAIIARA
Ga0137386_1044681133300012351Vadose Zone SoilDFDMMVTVSELEAIIAETPPGEQVQYETRLIGSVDDVTRKLTELKLNRSGDPDYLIFVGVDRFGECFLAAFSTIGDPLEFRARHQKQFDRATKGLLPAGILPRDHEGNYSSG*
Ga0137360_1017668923300012361Vadose Zone SoilVQYEGEPIDAVEQVTRKLTQLKLKRASDPDYLIFVGVDRVGECFFAAFSTMGDPREFRARHDKQLDRAAEGLLPGGMSPRPT*
Ga0137361_1025759033300012362Vadose Zone SoilMMVTVSELEAIIAETPPGEQVQYETRLIGSVDDVTRKLTELKLSRSGDPDYLIFIGVDRFGECFLAAFSTIGDPLEFRARHQKQFDRATKGLLPAGILPRDHEGNYSSG*
Ga0137390_1066942513300012363Vadose Zone SoilMMVTVSELEAVIAQTPSGEQVQFDTKLIGSVDHVTRKLTELKLNRSGDPDYLIFVGLDRFGECFLAAFSTIGDPLEFRARHEKQLDRATQG
Ga0137398_1040279623300012683Vadose Zone SoilMMVTVSELEAIIAETPPGEQVQYETRLIGSVDDVTRKLTELKLSRSGDPDYLIFVGVDRLGECFLAAFSTIGDPLEFRARHQKQFDRATKGLLPAGILPRDHEGNYSSG*
Ga0137398_1086399613300012683Vadose Zone SoilVQYEGEPIDAVEQVTRKLTELKLKRASDPDYLIFVGVDRVGECFFAAFSTMGDPREFRARHDKQLDRAAEGLLPAGMSPRPT*
Ga0137397_1047091923300012685Vadose Zone SoilMMVTVSELEAIIAETPPGEQVQYETRLIGSVDDVTRKLTELKLSQSGDPDYLTFVAVDRFGECFLAAFSTIGDPLEFRARHQKQFRSCY*
Ga0137395_1021609123300012917Vadose Zone SoilMAFQPVVDTVSELEAIVAETPPGEQVQYETRLIGSVDDVTRKLTELKLSRSGDPDYLIFVGVDRFGECFLAAFSTIGDPLEFRARHQKQ
Ga0137396_1085400133300012918Vadose Zone SoilMSALVDSSRSRLALAWFSDMMVTVSELEAVIAQTPSGEQVQFDTKLIGSVDHVTRKLTELKLNRSGDPDYLIFVGLDRFGECFLAAFSTIGDPLEFRARHEKQLDRATQG
Ga0137394_1150807613300012922Vadose Zone SoilMMVTVSELEAIIAETPPGEQVQYETRLIGSVDDVTRKLTELKLSRSGDPDYLIFVGVDRFGECFLAAFSTIGDPLEFRARHQKQFRSCY*
Ga0137359_1146814923300012923Vadose Zone SoilEAIIAETPPGEQVQYETRLIGSVDDVTRKLTELKLSRSGDSDYLIFVGVDRLGECFLAAFSTIVDPLEFRARHQKQFDRATKGLLPGWHIAARP*
Ga0137404_1079728423300012929Vadose Zone SoilMMVTVSELEAIIAETPPGEQVQYEPRLIGSVDDVTRKLTELKLSRSGDPDYLIFVGVDRLGECFLAAFSTIGDPLEFRARHQKQFDRATKGLLPSGILRREHEDNYSSG*
Ga0137404_1170860523300012929Vadose Zone SoilMTITVSELESIIAHAAPGDQVQYEGKPIGSVDQVTRKLTELKLKRSSDPDYLIFVGIDRLGECFFAAFSTMGDPREFRARHDKQLDRAAEGLLPAGVSPRLT*
Ga0137407_1102906623300012930Vadose Zone SoilGEQVQYETRLIGSVDDVTTKLTELKLNRSGDPDYLIFVGVDRFGECFLAAFSTIGDPLEFRARHQKQFDRATKGLSPAGILPRDHEGNYSSG*
Ga0137410_1170737613300012944Vadose Zone SoilSFAQTIPGEQVQYEGEPIDAVEQVTRKLTELKLKRASDPDYLIFVGIDRVGECFFAAFSTMGDPREFRARHDKRLDRAAEGLLPGGMSPRPT*
Ga0164301_1030191823300012960SoilMMITVSELEAFIAQTLAGEQVQYEGKPIGSVDQMTRKLTELKLKRSGDPEYLIFGGIDHFGECFLTAFSTMGDPREFRARHDKQLDRAGEGLFPAGMSPRPT*
Ga0164301_1158671823300012960SoilMGTLMVTVSELEAIIAETPPGEQVQYETRLIGSVDDVTRKLTELKLSRSGDPDYLIFVGVDRFGECFLAAFSTIGDPLEFRARRQKQLAYCRTTMRAIIARAEG*
Ga0164309_1071763023300012984SoilMMITVSELEAFIAQTLAGEQVQYEGKPIGSVDQMTRKLTELKLNRSGDPDYLIFVGIDRFGECFLTAFSTMGDPREFRLRHDKQLDRAVEGLFPAGMSPRPI*
Ga0164304_1025622823300012986SoilMMITVSELEAFIAQTLAGEQVQYEGKPIGSVDQMTRKLTELKLKRSGDPEYLIFVGIDHFGECFLTAFSTMGDPREFRARHDKQLDRAGEGLFPAGMSPRPT*
Ga0164306_1144257113300012988SoilMMITVSELEAFIAQTLAGEQVQYEGKPIGSVDQMTRKLTELKLKRSGDPEYLIFVGIDHFGECFLTAFSIMGDPREFRARHDKQLDRAGEGLFPAGMSPRPT*
Ga0164305_1068187923300012989SoilMMITVSELEAIIAQTLAGEQVQYEGKPIGSVDQMTRKLTELKLKRSGDPEYLIFVGIDHFGECFLTAFSTMGDPREFRLRHDKQLDRAVEGLFPAGMSPRPI*
Ga0120155_113716713300013768PermafrostMMVTVSELEAVIAQTPFGEQVQFDTKLIGSVDHGIRKLTELKLNRSGDNDYLIFVGLDRFGECFLAAFSTIGDPLEFRARHEKQLDRATQGLLPTGLL
Ga0120158_1007021223300013772PermafrostMMVTVSELEAVIAQTPFGEQVQFDTKLIGSVDHVIRKLTELKLNRSGDNDYLIFVGLDRFGECFLAAFSTIGDPLEFRARHEKQLDRATQGLLPIGLLPRDDGGIISSAAEGEKGK*
Ga0182024_1023277023300014501PermafrostLAVAFSTGEIGMMIAVSELEELIARPPEGEQVQFETKPIGSAEHAASKLTELKLSRRDDPHYLIFVGLDRFGESALIPFSTIGDPLEFRSRHRP*
Ga0137405_116159723300015053Vadose Zone SoilMMVTVSELEAIIAETPPGEQVQYETRLFGSVDDVTRKLTELKLNRSGDPDYLIFVGVDRFGECFLAAFSTIGDPLEFRARRQKQLAYCRTTMRAIIARAEG*
Ga0137405_121462423300015053Vadose Zone SoilMMVTVSELEAIIAETPPGEQVQYEPRLIGSVDDVTRKLTELKLSRSGDPDYLIFVGVDRFGECFLAAFSTIGDPLEFRARRQKQLAYCRATMRAIIARAEG*
Ga0137418_1031525413300015241Vadose Zone SoilISALVDSSRSRLALAWFSDMMVTVSELEAVIAQTPSGEQVQFDTKLIGSVDHVTRKLTELKLNRSGDPDYLIFVGLDRFGECFLAAFSTIGDPPQFRARHGRQLDHATQGLLPTGLLPRDDGGIISSAAEGEKGK*
Ga0137403_1052350233300015264Vadose Zone SoilMMVTVSELEAIIAETPPGEQVQYETRLIGSVDDVTRKLTELKLSRSGDPDYLIFVGVDRFGECFLAAFSTIGDPLEFRARHQKQFDRATKGLLPSGILRREHEDNYSSG*
Ga0184621_1023352713300018054Groundwater SedimentMITVSELESIIAQTIPGEQVQYEGEPIGAVEQVTTKLTELKLKRASDPDYLSFVGIDRFGECFFAAFSTMGDPREFRAGHDKQLDRADEGL
Ga0184618_1049291813300018071Groundwater SedimentLEAVIAQTPSGEQVQFDTKLIGSVDHVTRKLTELKLNRSGDPDYLIFVGMDRSGECFLAAFSTMGDPREFRARHDKQLDRAAEGLFPAGMSSRPT
Ga0193729_115213523300019887SoilLVADMMVTVSELEAVIAQTPSGEQVQFDTKLIGSVDHVTRKLTELKLNRSGDTDYLIFVGLDRFGECFLAAFSTIGDPLEFRVRHEKQLDRATQG
Ga0193729_124217323300019887SoilMITVSELESIIAQTIPGEQVQYEGEPIGAVEQVTTKLTELKLKRASDPDYLFFVGIDRFGECFFAAFSTMGDPREFRAGHDKQLDRADEGLLPAGMSPRPT
Ga0193751_101170093300019888SoilMMVTVSELEAVIAQTPSGEQVQFDTKLIGSVDHVTRKLTELKLNRSGDPDYLIFVGLDRFGECFLAAFSTIGDPLEFRARHEKQLDRATQGLLPIGLLPRDDEGIISSAAEGEKGK
Ga0193751_101835833300019888SoilMMVTVSELEDLIALTPGGEQVQFETKSIGSVEHVTQKLTELKLSRSDDPHYLIFVGLDRFGECYLIPFSTIGDPVEFRSRHRLNLKAGDE
Ga0193730_119334113300020002SoilEALDIMITVSELESIIAQTIPGEQVQYEGEPIGAVEQVTTKLTELKLKRASDPDYLSFVGIDRFGECFFAAFSTMGDPREFRAGHDKQLDRADEGLLPAGMSPRPT
Ga0179590_116082223300020140Vadose Zone SoilMMVTVSELEAIIAETPPGEQVQYATRLIGSVDDVTRKLTELKLSRSGDPDYLIFVGVDRFGECFLAAFSTIGDPLEFRARRQKQLAYCRTTMRAIIARAEG
Ga0210381_1005202123300021078Groundwater SedimentMMITVSELESIIAQALPGEQVHYEGKPIGSVDQMTRKLNELKLKRGGDPDYLIFVGMDRSGECFLAAFSTMGDPREFRARHDKQLDRAAEGLFPAGMSSRPT
Ga0210405_10012752143300021171SoilMVTVSEWEAIIAETPPGEQVQYETRLIGSVDDVTRKLTELKLSRSGDPDYLIFVGVDRFGECFLAAFSTIGDPLEFRARHQKQFDRATKGLLPAGILPRDHEGSYSSG
Ga0210409_1157337423300021559SoilRRENRDFEMMVTVSEWEAIIAETPPGEQVQYETRLIGSVDDVTRKLTELKLSRSGDPDYLIFVGVDRFGECFLAAFSTIGDPLEFRARHQKQFDRATKGLLPAGILPRDHEGSYSSG
Ga0222623_1002636723300022694Groundwater SedimentMITVSELESIIAQTIPGEQVQYEGEPIGAVEQVTTKLTELKLKRASDPDYLSFVGIDRFGECFFAAFSTMGDPREFRAGHDKQLDRADEGLLPAGMSPRPT
Ga0179589_1044642323300024288Vadose Zone SoilVQYEGEPIDAVEQVTRKLTELKLKRASDPDYLIFVGIDRVGECFFAAFSTMGDPREFRARHDKRLDRAAEGLLPGGMSPRPT
Ga0179589_1050180513300024288Vadose Zone SoilQTPSGEQVQYESKPIGAVDHVTRKLTELKLKRSSDPDYLIFVGIDRFGECFLAAFSTMGDPREFRARYDKQLDRAAEGLLPARAEKGEIDADRNIENVER
Ga0208850_102510113300025457Arctic Peat SoilMMVTVSELEAVIAQTPSGEQVQFDTKLIGSVDHVTRKLTELKLNRSGDPDYLIFVGLDRFGECFLAAFSTIGDPLEFRARKQLDRATQGLLPIGLLPRDDGGIISPG
Ga0207932_107981313300025495Arctic Peat SoilMMITVSELEAIIAQTPADEQVLYEAKPIGSVDHVTRKLTELKLSRASDPEYLIFVGLDGFGKCFLAAFSTIGDPLEFRARHEKQLGPATERLFPAGITRLT
Ga0209124_1022830123300025852Arctic Peat SoilMMITVSELEAIIAQTPADEQVLYEAKPIGSVDHVTRKLTELKLSRTSDPEYLIFVGLDRFGECFLAAFSTIGDPLKFRTRHEKQLGPATERLFPAGITRLT
Ga0209540_1007279523300025888Arctic Peat SoilMMITVLELEAIIAQTPPGEHVRYDATPIGSVDHVTRKLTELKLSRSSDPDYLIFVGLDRFGECFLAAFSTVGDPLEFRARHEKQLDRATKGLLPTGTLTRPA
Ga0209540_1048124213300025888Arctic Peat SoilMITVSELEAIIAQTPADEQVLYEAKPIGSVDHVTRKLTELKLSRTSDPEYLIFVGLDRFGECFLAAFSTIGDPLKFRTRHEKQLGPATERLFPAGITRLT
Ga0207707_1004294923300025912Corn RhizosphereMMVTVSELEAVIAQTPSGEQVQFDTKLIGSVDHVTRKLTALKLNRSGDPDYLIFVGLDRFGECFLAAFSTIGDPLEFRARHERQLDRATQGLLPIGLSPRDDGRIISSAAEGEKGK
Ga0207693_1129165013300025915Corn, Switchgrass And Miscanthus RhizosphereINGDFDMMVTVSELEAIIAETPPGEQVQYETRLIGSVDDVTRKLTELKLSRSGDPDYLIFVGVDRFGECFLAAFATIGDPLEFRARRQKQLAYCRTTMRAIIARAEG
Ga0209350_104768943300026277Grasslands SoilRQRGNRDFDMMVTVSELEAIIAETPPGEQVQYETRLIGSVDDVTRKLTELKLNRSGDPDYLIFVGVDRFGECFLAAFSTIGDPLEFRARHQKQFDRATKGLLPAGILPRDHEGNYSSG
Ga0209438_119933723300026285Grasslands SoilMMVTVSELEAIIAETPPGEQVQYETRLIGSVDDVTRKLTELKLSRSGDPDYLIFVGVDRFGECFLAAFSTIGDPLEFRARHQKQFDRATKGLLPAGILPRDHEGNYSSG
Ga0209647_103414333300026319Grasslands SoilMLITVSELEAIIAQTSPGEQVQYEAKPIGSVDHVSRKLTELKLSRGSDPYYLIFVGLDRSGECFLAAFSTIGDPLEFRARHEKQLDRATKGLFPTGASARQT
Ga0257153_102326433300026490SoilVQCEGEPIDAVEQVTRKLTELKLKRASDPDYLIFVGIDRVGECFFAAFSTMGDPREFRARHDKRLDRAAEGLLPGGMSPRPT
Ga0209161_1040339113300026548SoilRQRGNRDFDMMVTVSELEAIIAETPPGEQVQYETRLIGSVDDVTRKLTELKLNRSGDPDYLIFVGVDRFGECFLAAFSTIGDPLEFRARHQKQFYRATKGLLPAGILPRDHEGNYSSG
Ga0209648_1014936623300026551Grasslands SoilMITVSELEAIIAQTPPGKHVQHEAKPIGSVDYVTRKLTELKLSRSSDPDYLIFVGIDRFGECFLAAFSTIGDPLEFRARHERRLDRATERLFPPGMSRLGEQG
Ga0209648_1033458223300026551Grasslands SoilMMITVSELEELIARTRDGEQVQFETKSIGSAEHVTRKLTELKLSRSDDPHYLIFVGLDRFGECALIPFSTIGDPLEFRSRHRP
Ga0208993_110966523300027480Forest SoilRRDMMITVSELEEIVAQTPSGERVHYRAKPIGSVEHVTRKLTELKLSRSSDPDYLIFVGIDRFGECFLAAFSTIGDPLEFRARHEKQLDRATERLLPAGMSPRLT
Ga0209524_105063613300027521Forest SoilSPGEPVQYEAKPIGSVDYVTRKLTELKLSRSSDPDYLIFVGIDRFGECFLAPFSTIGDPLEFRARHERRLDRASERLFPPSMSRLGEQG
Ga0209219_109499413300027565Forest SoilMINVSELEAIIAQAPPGEPVQYEAKPIGSVDYVTRKLTELKLSRSSDPDYLIFVGIDRFGECFLAPFSTIGDPLEFRARHERRLDRASERLFPPSM
Ga0209331_100670853300027603Forest SoilMINVSELEAIIAQAPPGEPVQYEAKPIGSVDYVTRKLTELKLSRSSDPDYLIFVGIDRFGECFLAPFSTIGDPLEFRARHERRLDRASERLFPASMSRLGEQG
Ga0209117_102078943300027645Forest SoilMITVSELEAIVAQTPPGDHVQYEAKPIGSVDYVTRKLTELKLSRSSDPDYLIFVGIDRFGDCYLAAFSTIGDPLEFRARHERRLDRATERLFPPATSRLGEQG
Ga0209736_102693543300027660Forest SoilMINVSELEAIIAQAPPGEPVQYEAKPIGSVDYVTRKLTELKLSRSSDPDYLIFVGIDRFGECFLAPFSTIGDPLEFRARHERRLDRASERLFPPSMSRLGEQG
Ga0209526_1006129033300028047Forest SoilMINVSELEAIIAQAPPGEPVQYEAKPIGSVDYVTRKLTELKLSRSSDPDYLIFVGIDRFGECFLAPFSTIGDPLEFRARHERRLDRASERLLPPGMSRLGEQG
Ga0307307_1008697023300028718SoilEVTEALDIMITVSELESIIAQTIPGEQVQYEGEPIGAVEQVTTKLTELKLKRASDPDYLSFVGIDRFGECFFAAFSTMGDPREFRAGHDKQLDRADEGLLPAGMSPRPT
Ga0307299_1014619413300028793SoilMMITVSELESIIAQALPGEQVHYEGKPIGSVDQMTRKLNELKLKRGGDPDYLIFVGMDRSGECFLAAFSTMGDPREFRARQDKQLDRAAEGLFPAGMSSRPT
Ga0307302_1034005923300028814SoilSIIAQTIPGEQVQYEGEPIGAVEQVTTKLTELKLKRASDPDYLFFVGIDRFGECFFAAFSTMGDPREFRAGHDKQLDRADEGLLPAGMSPRPT
Ga0307310_1011594833300028824SoilIAQTIPGEQVQYEGEPIGAVEQVTTKLTELKLKRASDPDYLSFVGIDRFGECFFAAFSTMGDPREFRAGHDKQLDRADEGLLPAGMSPRPT
Ga0307310_1013784623300028824SoilVHYEGKPIGSVDQMTRKLNELKLKRGGDPDYLIFVGMDRSGECFLAAFSTMGDPREFRARQDKQLDRAAEGLFPAGMSSRPT
Ga0307304_1049903523300028885SoilRAGNEREGEVTEALDIMITVSELESIIAQTIPGEQVQYEGEPIGAVEQVTTKLTELKLKRASDPDYLFFVGIDRFGECFFAAFSTMGDPREFRAGHDKQLDRADEGLLPAGMSPRPT
Ga0311330_1090627913300029945BogITQTSPGEQVLYQTKPIGSVEHVTAKLAELKLSRSRDPDYLVFVGLDRYGECFLCAFSTIGDPIEFRARHKNRLGHLTEGLLPAGVTPQPI
Ga0307471_10030689323300032180Hardwood Forest SoilMMVTVSELEAIIAETPPGEQVQYETRLIGSVDDVTRKLTELKLTRSGDPDYLIFVGVDRFGECFLAAFSTIGDPLEFRARRQKQLAYCRTTMRAIIARAEG

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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