Metagenome / Metatranscriptome Family F087620

Basic Information
Family ID	F087620
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	70 residues
Representative Sequence	MTLPRRPISGGDVHTRAIERLELAVDDRERSSEQSQAAQGGPDERTAAVALAAANEQVAAREAWVKYIEHGY
Number of Associated Samples	91
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	24.77 %
% of genes near scaffold ends (potentially truncated)	45.45 %
% of genes from short scaffolds (< 2000 bps)	87.27 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (60.909 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (29.091 % of family members)
Environment Ontology (ENVO)	Unclassified (39.091 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.273 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96 1JGI10216J12902_1020657191 2JGI10216J12902_1131611502 3JGI12053J15887_100376031 4C688J35102_1199877222 5Ga0062593_1001715562 6Ga0063356_1029920721 7Ga0070676_115948341 8Ga0070683_1017113751 9Ga0070675_1004455092 10Ga0070714_1019411961 11Ga0070694_1011629562 12Ga0068867_1007363942 13Ga0068853_1014476071 14Ga0066651_100259383 15Ga0066652_1002470422 16Ga0075432_102214722 17Ga0070716_1015800471 18Ga0075422_102263832 19Ga0066653_101254113 20Ga0066653_103290383 21Ga0066660_100673741 22Ga0079221_113229011 23Ga0075421_1000629645 24Ga0075421_1003776442 25Ga0075421_1008391963 26Ga0075425_1005625751 27Ga0075434_1000150862 28Ga0075436_1003270182 29Ga0105251_100696953 30Ga0099829_102970672 31Ga0099830_109622001 32Ga0099830_115250742 33Ga0099828_103386281 34Ga0099828_106679182 35Ga0099828_108717342 36Ga0075423_107471672 37Ga0105248_101807232 38Ga0126313_100215217 39Ga0126315_100332804 40Ga0126314_101404571 41Ga0126314_114623671 42Ga0126310_100453902 43Ga0126310_103472931 44Ga0127445_10663971 45Ga0134122_130422691 46Ga0134123_132636881 47Ga0137392_104846692 48Ga0137392_112538802 49Ga0137391_103144221 50Ga0137393_101362921 51Ga0137389_102173034 52Ga0137388_108131873 53Ga0137382_103989682 54Ga0150985_1013999252 55Ga0137368_108528202 56Ga0137390_106516842 57Ga0134024_10947331 58Ga0164298_114444111 59Ga0164299_114486701 60Ga0164302_109225101 61Ga0164307_102205784 62Ga0157372_130582121 63Ga0132258_120428573 64Ga0132258_124026561 65Ga0132256_1009824621 66Ga0132255_1059047182 67Ga0193722_11342541 68Ga0222622_104467082 69Ga0222622_105251051 70Ga0207653_101584381 71Ga0207688_109249121 72Ga0207654_103909911 73Ga0207687_104850261 74Ga0207691_100690893 75Ga0207651_107567132 76Ga0209577_100865882 77Ga0208995_10807941 78Ga0208991_10277072 79Ga0209701_104836461 80Ga0209481_105327431 81Ga0209590_104411542 82Ga0209382_101653242 83Ga0209382_109064132 84Ga0307291_11199791 85Ga0307303_100151152 86Ga0307303_101188221 87Ga0307297_100430783 88Ga0307297_100431922 89Ga0307297_101282922 90Ga0307280_102318391 91Ga0307290_101555122 92Ga0307299_100886551 93Ga0307305_101054562 94Ga0307294_100396822 95Ga0307292_104911081 96Ga0307302_101631622 97Ga0307302_104117921 98Ga0307302_104151721 99Ga0307296_105843762 100Ga0307310_104124481 101Ga0307312_102958842 102Ga0307289_100859821 103Ga0307277_101677572 104Ga0307277_104505352 105Ga0307308_101971401 106Ga0307304_105363752 107Ga0308184_10562421 108Ga0308179_10479461 109Ga0370541_056971_4_219 110Ga0370546_080371_293_511
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96 1JGI10216J12902_1020657191 2JGI12053J15887_100376031 3Ga0070683_1017113751 4Ga0070714_1019411961 5Ga0070716_1015800471 6Ga0066653_101254113 7Ga0066653_103290383 8Ga0099830_109622001 9Ga0099828_106679182 10Ga0127445_10663971 11Ga0137391_103144221 12Ga0134024_10947331 13Ga0164299_114486701 14Ga0164302_109225101 15Ga0222622_104467082 16Ga0307292_104911081 17Ga0307302_104117921 18Ga0307304_105363752
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72 1Ga0070694_1011629562 2JGI10216J12902_1131611502 3JGI12053J15887_100376031 4Ga0062593_1001715562 5Ga0066651_100259383 6Ga0066660_100673741 7Ga0075421_1003776442 8Ga0075434_1000150862 9Ga0099830_115250742 10Ga0099828_106679182 11Ga0075423_107471672 12Ga0126310_103472931 13Ga0137392_104846692 14Ga0137388_108131873 15Ga0137382_103989682 16Ga0150985_1013999252 17Ga0137368_108528202 18Ga0137390_106516842 19Ga0164299_114486701 20Ga0164302_109225101 21Ga0132258_124026561 22Ga0193722_11342541 23Ga0209590_104411542 24Ga0307292_104911081 25Ga0307302_104117921 26Ga0307296_105843762 27Ga0307308_101971401 28Ga0307304_105363752 29Ga0308179_10479461 30Ga0370546_080371_293_511
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.00% β-sheet: 0.00% Coil/Unstructured: 43.00%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF06480	FtsH_ext	4.55
PF00313	CSD	2.73
PF13271	DUF4062	2.73
PF12680	SnoaL_2	1.82
PF01243	Putative_PNPOx	1.82
PF07992	Pyr_redox_2	1.82
PF05694	SBP56	1.82
PF01695	IstB_IS21	1.82
PF04377	ATE_C	0.91
PF04020	Phage_holin_4_2	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0465	ATP-dependent Zn proteases	Posttranslational modification, protein turnover, chaperones [O]	4.55
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	1.82
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.91
COG1505	Prolyl endopeptidase PreP, S9A serine peptidase family	Amino acid transport and metabolism [E]	0.91
COG1611	Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) family	Nucleotide transport and metabolism [F]	0.91
COG1770	Protease II	Amino acid transport and metabolism [E]	0.91
COG1895	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	0.91
COG1950	Uncharacterized membrane protein YvlD, DUF360 family	Function unknown [S]	0.91
COG2250	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	0.91
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	0.91

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	39.09 %
Unclassified	root	N/A	60.91 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	39.09 %
Unclassified	root	N/A	60.91 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	39.09 %
Unclassified	root	N/A	60.91 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.73 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	27.27 %
Unclassified	root	N/A	60.91 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	24.55 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.91 %
Unclassified	root	N/A	60.91 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8.18 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.91 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2.73 %
Unclassified	root	N/A	60.91 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.91 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.91 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.82 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	0.91 %
Unclassified	root	N/A	60.91 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	6.36 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.36 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.91 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.82 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.91 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	0.91 %
Unclassified	root	N/A	60.91 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.36 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.91 %
Sandaracinaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae	0.91 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.82 %
Unclassified	root	N/A	60.91 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	0.91 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.36 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.91 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.82 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	0.91 %
Unclassified	root	N/A	60.91 %
unclassified Sandaracinaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → unclassified Sandaracinaceae	0.91 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.36 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.91 %
Sandaracinaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → unclassified Sandaracinaceae → Sandaracinaceae bacterium	0.91 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.82 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	0.91 %
Unclassified	root	N/A	60.91 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_102065719	Not Available	1619	Open in IMG/M
3300000956\|JGI10216J12902_113161150	Not Available	578	Open in IMG/M
3300001661\|JGI12053J15887_10037603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2720	Open in IMG/M
3300002568\|C688J35102_119987722	Not Available	837	Open in IMG/M
3300004114\|Ga0062593_100171556	Not Available	1682	Open in IMG/M
3300004463\|Ga0063356_102992072	Not Available	728	Open in IMG/M
3300005328\|Ga0070676_11594834	Not Available	504	Open in IMG/M
3300005329\|Ga0070683_101711375	Not Available	605	Open in IMG/M
3300005354\|Ga0070675_100445509	Not Available	1161	Open in IMG/M
3300005435\|Ga0070714_101941196	Not Available	574	Open in IMG/M

Showing 1 to 10 of 109 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.73%
Host-Associated	Host-Associated	27.27%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	1.82%
Plants	Host-Associated → Plants	27.27%
Terrestrial	Environmental → Terrestrial	70.91%

Habitat	Taxonomy	Distribution
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.00%
Sediment	Environmental → Aquatic → Sediment	1.82%
Soil	Environmental → Terrestrial → Soil	70.91%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.64%
Loam	Environmental → Terrestrial → Soil → Loam	8.18%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.55%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.82%

Habitat	Taxonomy	Distribution
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.73%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.27%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.91%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	53.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.82%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.91%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.91%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.91%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.73%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.82%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.91%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	5.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	29.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.91%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.45%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M

Showing 1 to 10 of 91 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1020657191	3300000956	Soil	MTLPRRPVSGGDVHARAIERLELAVDDRERSSEESKTAQGGPDKRTAGVALAAANEQVAAREAWVKYIEHGY*
JGI10216J12902_1131611502	3300000956	Soil	MILPRRPTGREVHARAIERLELAVDDRERLSEQSDAAQDGPDERTAAAPLAAATERVAAREAWVKYIEHGYY*
JGI12053J15887_100376031	3300001661	Forest Soil	MTLPRRPVRGGDVHVRAIERLDLAAGDLEHSKEERDAAHGQAEKRAAAVALAAANEQVAVREAWVKYIERAG*
C688J35102_1199877222	3300002568	Soil	MTLPRRPVSGGDVHARAIERLDLAVDDRERSSEESNAAHGGPDERTAAVVLAAANEQVAAREAWVKYIEQGY*
Ga0062593_1001715562	3300004114	Soil	MTLPRRPVSGGDVHARAIERLDLAVDDRERSSDESKAAQGGPDERTAAVALAAANEQLAAREAWAKYIEHGY*
Ga0063356_1029920721	3300004463	Arabidopsis Thaliana Rhizosphere	GGDVHARAIERLDLAVDDRERSSDESKAAQGGPDERTAAVALAAANEQLAAREAWAKYIEHGY*
Ga0070676_115948341	3300005328	Miscanthus Rhizosphere	MTLPRRPISGGDVHTRAIERLELAVDDRERSSEQSQAAQRGPDERTAAVALAAANEQVAAREAWVKYIEHGY*
Ga0070683_1017113751	3300005329	Corn Rhizosphere	QAIAARHRLNTGQLAMTLPRRPISGGDVHTRAIERLELAVDDRERSSEQSQAAQGGPDERTAAVALAAANEQVAAREAWVKYIEHGY*
Ga0070675_1004455092	3300005354	Miscanthus Rhizosphere	MTLPRRPISGGDVHTRAIERLELAVDDRERSSEQSQAAQGGPNERTAAVALAAANEQVAAREAWVKYIEHGY*
Ga0070714_1019411961	3300005435	Agricultural Soil	MTLPRRPISGGDVHTRAIERLELAVDDRERSSEQSQAAQGGPDERTAAVALAAANEQVA
Ga0070694_1011629562	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MTLPRRPISGGDVHTRAIERLELAVDDRERSSEQSQAAQGGPDERTAAVALAAANEQVAAREAWVKYIEHGY*
Ga0068867_1007363942	3300005459	Miscanthus Rhizosphere	MTLPRRPISGSDVHTRAIERLELAIDNRERSSEQSQAAQRGPDERTAAVALAAANEQVAAREAWVKYIEHGY*
Ga0068853_1014476071	3300005539	Corn Rhizosphere	MTLPRRPISGSDVHTRAIERLELAIDNRERSSEQSQAAQRGPDERTAAVALAAANEQLAAREAWVKYIEHGY*
Ga0066651_100259383	3300006031	Soil	MTLPRRPVRGGDVHTRAIERLDDAVDDLEHLNEGTDSAHGRPDKRTAAVALAAAHERVAAREAWVKYIEQGY*
Ga0066652_1002470422	3300006046	Soil	MTLRHRPRGGEVHARAIDRLELAVDDRERSSRESDAAVGGPDEQAAVLALAAANERVAAREAWVKYVEHGY*
Ga0075432_102214722	3300006058	Populus Rhizosphere	VHARAIERLELAVDDRERSSEESKAAQGGPDKRTAAVALAAANEQVAAREAWVKYIEHGY
Ga0070716_1015800471	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	SDVHTRAIERLELAIDNRERSSEQSQAAQRGPDERTAAVALAAANEQVAAREAWVKYIEHGY*
Ga0075422_102263832	3300006196	Populus Rhizosphere	MTLPRRPVSGGDVHARAIERLDQAVDDRAHSSEQSKAAQRGPDKRTAAVALAAANEQVAAREAWVKYIEHGY*
Ga0066653_101254113	3300006791	Soil	MTLPRRPVRGGDVHTRAIERLDEAVDDLEHLNEGTDSAHGRPDKRTPAVALAAAHERVAARE
Ga0066653_103290383	3300006791	Soil	VRHRVKAGQLAMTLRHRPRGGEVHARAIDRLELAVDDRERSSRESDAAVGGPDEQAAVLALAAANERVAAREAWVKYVEHGY*
Ga0066660_100673741	3300006800	Soil	MTLPHRPVRGGDVHARAIERLDVAVDDRERSNEESDAAQGRPDERTAALALAAANEQVAAREAWVKYIEHGY*
Ga0079221_113229011	3300006804	Agricultural Soil	VHARAIERLEVAVDDRERSSEESDAAQGRPDERTAGLALAAANEQVAAREAWVKYIEHGY
Ga0075421_1000629645	3300006845	Populus Rhizosphere	MTLPRRPVSGGDVHARAIERLELAVDDRERSSEESKAAQGGPDKRTAAVALAAANEQVAAREAWAKYIEHGY*
Ga0075421_1003776442	3300006845	Populus Rhizosphere	MTLPRRPVSGGEVHAQAIQRLDQAVDDRERSSEQSQAAQGAPDEGTAAVALAAANEQLAAREAWVKYIERGC*
Ga0075421_1008391963	3300006845	Populus Rhizosphere	VPQAIAARRRLNTGQLAMTLPRRPLRGGEVHARAIERLDVAVDDRERASEQSEAAHGGPDERTAAVALAAANEQAAAREAWVKYIEHGY*
Ga0075425_1005625751	3300006854	Populus Rhizosphere	VHARAIERLDVAVDDRERASEQSEAAHGGPDERTAAVALAAANEQAAAREAWVKYIEHGY
Ga0075434_1000150862	3300006871	Populus Rhizosphere	MTLPRRPVSGGDVHARAIERLDQAVDDRAHSSEQSKAAQRGPDKRTAAVALAAANEQVAAREAWVKYIERGY*
Ga0075436_1003270182	3300006914	Populus Rhizosphere	MTLPRRPLRGGEVHARAIERLDVAVDDRERASEQSEAAHGGPDERTAAVALAAANEQAAAREAWVKYIEHGY*
Ga0105251_100696953	3300009011	Switchgrass Rhizosphere	MTLPRRPISGSDVHTRAIERLELAIDNRERSSEQSQAAQRGPDERTAAVALAAANEQVAAREAWVKYIE
Ga0099829_102970672	3300009038	Vadose Zone Soil	MTLPRRPVRGGDVHARAIERLDVAVDDLEHASEESHAAQGRFEKRTVAVALAAANEQVAAREAWVKYIEQGH*
Ga0099830_109622001	3300009088	Vadose Zone Soil	MTLPRRPVRGGDVHARAIERLGVAVDDLEHASEESAAAQGRFEKRTVAVALAAANEQLAAREAW
Ga0099830_115250742	3300009088	Vadose Zone Soil	MTLPRRPVRGGEVHARAIERLDVAVDDLAHSSVESDAALGGPDKRTAAVALAAANEQVAARDAWVKYIEHGY*
Ga0099828_103386281	3300009089	Vadose Zone Soil	MTLPRRPVRGGDVHARAIERLDVAVDDLEHSSEESHAAQGRFDKRSAAVELAWANEQVAAREAWVKYVEHGY*
Ga0099828_106679182	3300009089	Vadose Zone Soil	LPRRPVRGGDVHARAIERLDVAVDDLERSNEENDAAQGPSDKRTTAVALAAANEQLAAREAWVKYIEHGYKQARFHG*
Ga0099828_108717342	3300009089	Vadose Zone Soil	MTLPRRPVRGGDVHARAIERLDVAVDDLEHSSEESHAAQGRPDERAVAVALAWANEQVAAREAWVKYIERGY*
Ga0075423_107471672	3300009162	Populus Rhizosphere	MTLPRRPLRGGEVHARAIERLDVAVDDRERASEQSEAAHGGPDERTAAVALAAANERVAAREAWVKYIEHGY*
Ga0105248_101807232	3300009177	Switchgrass Rhizosphere	MTLPRRPISGGDVHTRAIERLELAIDNRERSSEQSQAAQRGPDERTAAVALAAANEQVAAREAWVKYIEHGY*
Ga0126313_100215217	3300009840	Serpentine Soil	MTLQRRPVSGGDVHARAIERLDLAVDDRERSSKESKAAQGGPNEPTAAVALAAANEQVAARE
Ga0126315_100332804	3300010038	Serpentine Soil	MTLQRRPVSGGDVHARAIERLDLAVDDRERSSKESKAAQGGPNEPTAAVALAAANEQVAAREAWVKYIEHGY*
Ga0126314_101404571	3300010042	Serpentine Soil	RPTSGDDVHARAIERLDLAVDDRERSSKESKAAHGGPDERTAAVALAAANEQVAAREAWVKYIEHGY*
Ga0126314_114623671	3300010042	Serpentine Soil	MTLQRRPVSGGDVHARAIERLDLAVDDRERSSKESKAAQGGPNEPTAAVALAAANEQVAAREAWVK
Ga0126310_100453902	3300010044	Serpentine Soil	MTLPRRPVSGGDVHARAIERLDLAVDDRERSSEESNAAHGGPNERTAAVVLAAANEQVAAREAWVKYIEHGY*
Ga0126310_103472931	3300010044	Serpentine Soil	LPRRPTSGGDVHARAIERLDLAVDDRERSSEESNAAHGGPDDRTAAVALAAANEQVAAREAWVKYIEQGY*
Ga0127445_10663971	3300010085	Grasslands Soil	VHARAIERLGVAVDDRQRSNEESDAAQGGPDERTAAVALAAANEQVAAREAWVKY
Ga0134122_130422691	3300010400	Terrestrial Soil	RRPISGSDVHTRAIERLELAIDNRERSSEQSQAAQGGPDERTAAVALAAANEQVAAREAWVKYIEHGY*
Ga0134123_132636881	3300010403	Terrestrial Soil	AARHRLNSGQLAMTLPRRPTRGGDVHTRAIERLELAVDDRERSSEQSQAAQRGPDERTAAVALAAANEQVAAREAWVKYIEHGY*
Ga0137392_104846692	3300011269	Vadose Zone Soil	MTLPRRPVRGGDVHARAIERLDVAVDDLEHSSEESHAAQGRPDERAVAVALAWANEQVAAREAWVKYVERGY*
Ga0137392_112538802	3300011269	Vadose Zone Soil	MTLPRRPVRGGEVHARALERLDVAVDDLEHSSEASHAAQGRFDKRSAAVGLAWANEQVAAREAWVRYIEHGY*
Ga0137391_103144221	3300011270	Vadose Zone Soil	EKRREKVRLAMTLPRRPVRGGDVHARAIERLDVAVDDLAHSSEASHAAQGRFDKRTAAVALAAANEQVAAREAWVKYVEHGY*
Ga0137393_101362921	3300011271	Vadose Zone Soil	RREKVRLAMTLPRRPVRGGDVHARAIERLDVAVDDLEHASEESDAAQGRFDKRTVAVALAAANEQVAAREAWVKYIEQGH*
Ga0137389_102173034	3300012096	Vadose Zone Soil	MTLPRRPVRGGEVHARAIERLDVAVDDLAHSSEASHAAQGRFDKRTAAVALAAANEQVAGREAWVKYVEHGY*
Ga0137388_108131873	3300012189	Vadose Zone Soil	MTLPRRPVRGGEVHARAIERLDVAVDDLEHSSEASHAAQGRFDKRSAAVGLAWANEQLAAREAWVKYIEHGY*
Ga0137382_103989682	3300012200	Vadose Zone Soil	MRLPRRPARGGDVHARALERLDVAVDDLEHSSEESDAAQGGPDERTAAVALAAANEQMAAREAWVKYIEHGY*
Ga0150985_1013999252	3300012212	Avena Fatua Rhizosphere	VNAGQLAMTLRHRPRGGEVHARAVDRLEVAVDHRERSSKESDAAVGGPDEQAAVLALAAANERVAAREAWVKYVEHGY*
Ga0137368_108528202	3300012358	Vadose Zone Soil	MTLPHRPTSAEVHARAIERLELAVDDRERSSEQSDAAQGGPHERTAAVALAAANELVAAREAWVKYIEHGY*
Ga0137390_106516842	3300012363	Vadose Zone Soil	VITARLRLNSVRLAMTLPRRPVRGGDVHARAIERLDVAVDDLEHASEESDAAQGRFDKRTVAVALAAANEQVAAREAWVKYIEQGH*
Ga0134024_10947331	3300012404	Grasslands Soil	LDAAVDDLEHLDEESDSARGRPDKRTAAVALAAAHERVAAREAWVKYIEQDY*
Ga0164298_114444111	3300012955	Soil	RAIERLDAAVDDLEHSSEESDAAQGGPDERTAAVALAAANEQVAAREAWVKYIEHGY*
Ga0164299_114486701	3300012958	Soil	LNTARLAMTLRRRPVRGGDVHARAIERLDVAVDDLQRLSEERDAARGQIDERTAAVELAAANEQLAASEAWVKYIEYGY*
Ga0164302_109225101	3300012961	Soil	MHARAIERLDVAVNDLEHSREESDAAQGGLDERIAAASLAAATEQVAAREAWVKYIEHGH
Ga0164307_102205784	3300012987	Soil	MHARAIERLDVAVNDLEHSREESDAAQGGLDERIAAASLAAATEQVAAREAWVKYIEHG
Ga0157372_130582121	3300013307	Corn Rhizosphere	HRLNTGQLAMTLPRRPISGSDVHTRAIERLELAIDNRERSSEQSQAAQRGPDERTAAVALAAANEQVAAREAWVKYIEHGY*
Ga0132258_120428573	3300015371	Arabidopsis Rhizosphere	MTLPRRPISGSDVHTRAIERLELAIDNRERSSEQSQAAQGGPNERTAAVALAAANEQVAAREAWVKYIEHGY*
Ga0132258_124026561	3300015371	Arabidopsis Rhizosphere	MTSPRRSTRSGDVHARAIERLDVAVDARERLSEQSEAAQGGPDERTAAVALAAANERVAAREAWVKYIEHGY*
Ga0132256_1009824621	3300015372	Arabidopsis Rhizosphere	MTLPRRPISGGDVHTRAIERLELAIDNRERSSEQSQAAQGGPNERTAAVALAAANELVAARAAWVKYIEHGY*
Ga0132255_1059047182	3300015374	Arabidopsis Rhizosphere	DVHARAIERLELAVDDRERSSEESKAAQGGPDERTAAVALAAANERVAAREAWVKYIEHGY*
Ga0193722_11342541	3300019877	Soil	AARYRLDTVRLAMTLRRRPVMGGDVRTRAIERLHVAVDDLQRLGEESDAAEGRFDERTAAVALAAANEQLAAREAWVKYIEHGH
Ga0222622_104467082	3300022756	Groundwater Sediment	VHARAIARLDAAIEDRERSSKERDAAQGGPDDRTAAIALAAANEQMAAREAWVKYVEHGC
Ga0222622_105251051	3300022756	Groundwater Sediment	VPQAIAARHRLDTVSLAMTLPRRPASGGDVHARAIQRLDLAVDDRERSSEDSDAAQGGPDEPTAAVALAAANEQVAAREAWVKYIEHGY
Ga0207653_101584381	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MTLPRRPISGSDVHTRAIERLELAVDDRERSSEQSQAAQGGPDERTAAVALAAANEQVAAREAWVKYIEHGY
Ga0207688_109249121	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MTLPRRPISGGDVHTRAIERLELAVDDRERSSEQSQAAQGGPDERTAAVALAAANEQVAAREAWVKYIEHGY
Ga0207654_103909911	3300025911	Corn Rhizosphere	HTRAIERLELAVDDRERSSEQSQAAQGGPDERTAAVALAAANEQVAAREAWVKYIEHGY
Ga0207687_104850261	3300025927	Miscanthus Rhizosphere	MTLPRRPISGSDVHTRAIERLELAIDNRERSSEQSQAAQRGPDERTAAVALAAANEQVAAREAWVKYIEHGY
Ga0207691_100690893	3300025940	Miscanthus Rhizosphere	VHTRAIERLELAVDDRERSSEQSQAAQGGPDERTAAVALAAANEQVAAREAWVKYIEHGY
Ga0207651_107567132	3300025960	Switchgrass Rhizosphere	NTGQLAMTLPRRPISGGDVHTRAIERLELAVDDRERSSEQSQAAQGGPDERTAAVALAAANEQVAAREAWVKYIEHGY
Ga0209577_100865882	3300026552	Soil	MTLPHRPVRGGDVHARAIERLDVAVDDRERSNEESDAAQGRPDERTAALALAAANEQVAAREAWVKYIEHGY
Ga0208995_10807941	3300027388	Forest Soil	DVHVRAIERLDLAAGDLEHSKEERDAAHGQAEKRAAAVALAAANEQVAVREAWVKYIERA
Ga0208991_10277072	3300027681	Forest Soil	MTLPRRPVRGGDVHVRAIERLDLAAGDLEHSKEERDAAHGQAEKRAAAVALAAANEQVAVREAWVKYIERAG
Ga0209701_104836461	3300027862	Vadose Zone Soil	LPRRPVRGGDVHARAIERLDVAVDDLEHASEESDAAQGRFDKRTVAVALAAANEQVAAREAWVKYIEQGH
Ga0209481_105327431	3300027880	Populus Rhizosphere	MTLPRRPVSGGDVHARAIERLELAVDDRERSSEESKAAQGGPDKRTAAVALAAANEQVAAREAWVKYIERGY
Ga0209590_104411542	3300027882	Vadose Zone Soil	MTLPRRPVRDGDAYARAIERLHAAVDDLERSSEEGDAAHGRRDKRTAAVALAAANEQVAAREAWVKYIEHDH
Ga0209382_101653242	3300027909	Populus Rhizosphere	MTLPRRPVSGGDVHARAIERLELAVDDRERSSEESKAAQGGPDKRTAAVALAAANEQVAAREAWAKYIEHGY
Ga0209382_109064132	3300027909	Populus Rhizosphere	MTLPRRPLRGGEVHARAIERLDVAVDDRERASEQSEAAHGGPDERTAAVALAAANEQAAAREAWVKYIEHGY
Ga0307291_11199791	3300028707	Soil	MTLPRRPTRSGDVHARAIERLDVAVDARERLSEQSEAAQGGPDERTAAVALAAANEQVAAREAWVKYIEHGY
Ga0307303_100151152	3300028713	Soil	VHARAIERLDVAVDARERLSEQSEAAQGGPDERTAAVALAAANEQVAAREAWVKYIEHGY
Ga0307303_101188221	3300028713	Soil	MTMPRRPVSGGDVHTRAIERLELAVDDRERSSEQSQAAQRGPDERTAAVALAAANEQLAAREAWVKYIEH
Ga0307297_100430783	3300028754	Soil	LPRRPTSGGDVHARAIERLDLAVDDRERSSEESKAAHGGPDERTAAVALAAANEQVAAREAWVKYIEHRY
Ga0307297_100431922	3300028754	Soil	PLAMTLPRRPVSGGDVHARAIERLELAVDDRERSSEQSQAAQRGPDERTAAVALAAANEQLAAREAWVKYIEHGY
Ga0307297_101282922	3300028754	Soil	VHARAIERLDVAVDARERLSEQSEAAQGGPDERTAAVALAAANEQVAAREAWVKY
Ga0307280_102318391	3300028768	Soil	MTLPRRPVSGGAVHARAIERLELAVDDRERSSEQSKAAQGGPDERTAAVALAAANEQLAAREAWVKYIEHGY
Ga0307290_101555122	3300028791	Soil	GDVHARAIERLDLAVDDRERSSEESKAAHGGPDERTAAVALAAANERVAAREAWVKYIEHGY
Ga0307299_100886551	3300028793	Soil	VHARAIARLDAAIEDRERSSKERDAAQGGPDDRTAAIALAAANEQIAAREAWVKYVEHGC
Ga0307305_101054562	3300028807	Soil	HARAIEQLDLAVDDRERSSEQSEAAQGGPDERTAAVALAAANEQLAAREAWVKYIEHGY
Ga0307294_100396822	3300028810	Soil	VHARAIERLDVAVDARERLSEQSEAAQGGPDERTAAVALAAANERVAAREAWVKYIEHGY
Ga0307292_104911081	3300028811	Soil	ARLRLNTSRLAMTLPRRPVRGSDVHARAIERLDAAYDDRHHSSDERDAAQGGRDERAAAVAFAAANEQVAAREAWVKYIEHGH
Ga0307302_101631622	3300028814	Soil	MTLPHRPRGGEVHARAIDRLELAVDDRERSSKESDAAVGGPDERAAVLALAAANERVAAREAWVKYVEHGY
Ga0307302_104117921	3300028814	Soil	MTLPHRPVRGSDVHARAIARLDAAIEDRERSSKERDAAQGGPDDRTAAIALAAANEQIAA
Ga0307302_104151721	3300028814	Soil	DTVSLAMTLPRRPVSGGDVHARAIERLDLAVDDRERSSEESKAAHGGPDERTAAVALAAANERVAAREAWVKYIEHGY
Ga0307296_105843762	3300028819	Soil	TLPRRPASGGDVHARAIQRLDLAVDDRERSSEDSDAAQGGPDEPTAAVALAANEQVAAREAWVKYIEHGY
Ga0307310_104124481	3300028824	Soil	MTLPRRPVSGGDVHARAIERLELAVDDRERSSEQSQAAQRGPDERTAAVALAAANEQLAAREAWVKYIEHGY
Ga0307312_102958842	3300028828	Soil	MTMPRRPVSGGDVHTRATERLELAVDNRERSSEQSKAAQGGPDERTAAVALAAANEQLAAREAWVKYIEHGY
Ga0307289_100859821	3300028875	Soil	GDVHARAIERLELAVDDRERSSEQSQAAQRGPDERTAAVALAAANEQVAAREAWVKYIEHRY
Ga0307277_101677572	3300028881	Soil	MTLPHRPRGDEVHARAIDRLELAVDDRERSSKESDAAVGGPDERAAVLALAAANERVAAREAWVKYVEHGY
Ga0307277_104505352	3300028881	Soil	MTLPRRPVRGSDVHARAIERLDAAYDDRHHSSDERDAAQGGRDERAAAVAFAAANEQVAAREAWVKYIEHGH
Ga0307308_101971401	3300028884	Soil	VHARAIERLDLAVDDRERSSEESKVAIGGPDERTAAVALAAANEHVAAREAWVKYIEHGY
Ga0307304_105363752	3300028885	Soil	HRLTAVRLATTLPRRPVSGSDVHARAIERLHVAVDARERARAERDAAQGGPDERTAAVALAAANERVAAREAWVKYIEHGY
Ga0308184_10562421	3300031095	Soil	LAMTLPRRPASGGDVHARAIERLDLAVDDRERSSEESKAAHGGPDERTAAVALAAANEQVAAREAWVKYIEHRY
Ga0308179_10479461	3300031424	Soil	MTLPHRPAADGDVHARAIERLDAAVADLDHSSEESDAAEGRFDKRTAAVAMAAANEQVAAREAWVKYIEHGR
Ga0370541_056971_4_219	3300034680	Soil	MTLPHMPRGGEVHARAIDRLEVAVDHRERSSKESDAAVGGPDERAAVLALAAANERVAAREAWVKYVEHGY
Ga0370546_080371_293_511	3300034681	Soil	MTVPHRPVRGGEAHARAIERLEVAVDDRERSSKERDAAHGRPEQRTAAVALAAANEEVAAREAWVKYVEHGY

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087620

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences