Metagenome / Metatranscriptome Family F087528

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087528
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	58 residues
Representative Sequence	LRQWGDKYLNEKPPRLLRRKADKKPVIAAFVPKGADVLRFDELELVPGPGLKVG
Number of Associated Samples	92
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	94.55 %
% of genes from short scaffolds (< 2000 bps)	95.45 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (61.818 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (12.727 % of family members)
Environment Ontology (ENVO)	Unclassified (19.091 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.545 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.66% β-sheet: 13.41% Coil/Unstructured: 82.93%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF09391	DUF2000	5.45
PF01047	MarR	3.64
PF07883	Cupin_2	2.73
PF07690	MFS_1	1.82
PF12697	Abhydrolase_6	1.82
PF01625	PMSR	1.82
PF00296	Bac_luciferase	1.82
PF01638	HxlR	1.82
PF02142	MGS	1.82
PF07992	Pyr_redox_2	1.82
PF01035	DNA_binding_1	1.82
PF12695	Abhydrolase_5	1.82
PF10944	DUF2630	1.82
PF03061	4HBT	0.91
PF02899	Phage_int_SAM_1	0.91
PF01070	FMN_dh	0.91
PF00881	Nitroreductase	0.91
PF00753	Lactamase_B	0.91
PF01726	LexA_DNA_bind	0.91
PF01654	Cyt_bd_oxida_I	0.91
PF03706	LPG_synthase_TM	0.91
PF00248	Aldo_ket_red	0.91
PF01850	PIN	0.91
PF01323	DSBA	0.91
PF00266	Aminotran_5	0.91
PF13396	PLDc_N	0.91
PF01966	HD	0.91
PF04261	Dyp_perox	0.91
PF13646	HEAT_2	0.91
PF11578	DUF3237	0.91
PF05977	MFS_3	0.91
PF13610	DDE_Tnp_IS240	0.91
PF01661	Macro	0.91
PF00175	NAD_binding_1	0.91
PF00581	Rhodanese	0.91
PF01614	IclR	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	1.82
COG0350	DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)	Replication, recombination and repair [L]	1.82
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.82
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.82
COG3695	Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain	Transcription [K]	1.82
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.91
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	0.91
COG1271	Cytochrome bd-type quinol oxidase, subunit 1	Energy production and conversion [C]	0.91
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.91
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	0.91
COG2110	O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain	Translation, ribosomal structure and biogenesis [J]	0.91
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.91
COG2837	Periplasmic deferrochelatase/peroxidase EfeB	Inorganic ion transport and metabolism [P]	0.91
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.91
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.82 %
Unclassified	root	N/A	38.18 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.82 %
Unclassified	root	N/A	38.18 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.82 %
Unclassified	root	N/A	38.18 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	38.18 %
Unclassified	root	N/A	38.18 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.82 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.91 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.18 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	35.45 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.91 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.91 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.18 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	23.64 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	0.91 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.91 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.18 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.82 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	1.82 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.82 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.82 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.91 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.91 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.91 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.91 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.18 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.82 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1.82 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	1.82 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.82 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.91 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	0.91 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.91 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.91 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.18 %
unclassified Geodermatophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae	1.82 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1.82 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.82 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.82 %
unclassified Rubrobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae	0.91 %
Catellatospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Catellatospora	0.91 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.91 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.91 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.18 %
Geodermatophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	1.82 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1.82 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.82 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.82 %
Catellatospora vulcania	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Catellatospora → Catellatospora vulcania	0.91 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	0.91 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.91 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.91 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459015\|G14TP7Y02I5O9U	Not Available	614	Open in IMG/M
2228664021\|ICCgaii200_c0711909	Not Available	753	Open in IMG/M
3300000956\|JGI10216J12902_113644340	Not Available	741	Open in IMG/M
3300001139\|JGI10220J13317_10000558	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300004114\|Ga0062593_100549349	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300004479\|Ga0062595_101709982	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300004479\|Ga0062595_102304504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	531	Open in IMG/M
3300004480\|Ga0062592_102015323	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300005093\|Ga0062594_101688480	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300005178\|Ga0066688_10629213	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300005186\|Ga0066676_10628102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	729	Open in IMG/M
3300005332\|Ga0066388_105931212	Not Available	617	Open in IMG/M
3300005435\|Ga0070714_100882145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	868	Open in IMG/M
3300005435\|Ga0070714_102491153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	502	Open in IMG/M
3300005439\|Ga0070711_100824939	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300005468\|Ga0070707_101359311	Not Available	677	Open in IMG/M
3300005598\|Ga0066706_10427389	Not Available	1055	Open in IMG/M
3300005764\|Ga0066903_100831416	All Organisms → cellular organisms → Bacteria	1658	Open in IMG/M
3300005764\|Ga0066903_101434464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1299	Open in IMG/M
3300005764\|Ga0066903_103179740	Not Available	888	Open in IMG/M
3300005764\|Ga0066903_104051599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	785	Open in IMG/M
3300005764\|Ga0066903_104299583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	761	Open in IMG/M
3300005764\|Ga0066903_106422671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	613	Open in IMG/M
3300005764\|Ga0066903_109023087	Not Available	505	Open in IMG/M
3300005994\|Ga0066789_10146021	Not Available	1006	Open in IMG/M
3300006034\|Ga0066656_10189774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1304	Open in IMG/M
3300006049\|Ga0075417_10157172	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300006057\|Ga0075026_100089562	All Organisms → cellular organisms → Bacteria	1512	Open in IMG/M
3300006175\|Ga0070712_101807514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	535	Open in IMG/M
3300006845\|Ga0075421_100635658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1249	Open in IMG/M
3300006845\|Ga0075421_100956450	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300006845\|Ga0075421_102644373	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300006852\|Ga0075433_10627881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	942	Open in IMG/M
3300006854\|Ga0075425_100596521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1271	Open in IMG/M
3300006854\|Ga0075425_103159337	Not Available	501	Open in IMG/M
3300009137\|Ga0066709_103980998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	537	Open in IMG/M
3300009147\|Ga0114129_11101338	Not Available	994	Open in IMG/M
3300009174\|Ga0105241_12648668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	504	Open in IMG/M
3300009176\|Ga0105242_11834664	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300009840\|Ga0126313_11081014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	659	Open in IMG/M
3300009840\|Ga0126313_11096453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	654	Open in IMG/M
3300010036\|Ga0126305_11301030	Not Available	502	Open in IMG/M
3300010046\|Ga0126384_11915845	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300010343\|Ga0074044_11047699	Not Available	535	Open in IMG/M
3300010375\|Ga0105239_12556083	Not Available	595	Open in IMG/M
3300011270\|Ga0137391_10646511	Not Available	883	Open in IMG/M
3300012200\|Ga0137382_10686853	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300012205\|Ga0137362_11641691	Not Available	530	Open in IMG/M
3300012358\|Ga0137368_10354544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	975	Open in IMG/M
3300012360\|Ga0137375_10693080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	833	Open in IMG/M
3300012898\|Ga0157293_10122888	Not Available	699	Open in IMG/M
3300012899\|Ga0157299_10273156	Not Available	547	Open in IMG/M
3300012958\|Ga0164299_10213830	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300012971\|Ga0126369_11326186	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	810	Open in IMG/M
3300012985\|Ga0164308_10316838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1246	Open in IMG/M
3300014497\|Ga0182008_10625275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	607	Open in IMG/M
3300015201\|Ga0173478_10568469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	582	Open in IMG/M
3300015371\|Ga0132258_11689751	Not Available	1597	Open in IMG/M
3300015373\|Ga0132257_102289907	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300015374\|Ga0132255_103256080	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300016319\|Ga0182033_10765528	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300017937\|Ga0187809_10038933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1525	Open in IMG/M
3300017955\|Ga0187817_10066471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2238	Open in IMG/M
3300017966\|Ga0187776_10809072	Not Available	673	Open in IMG/M
3300017973\|Ga0187780_10591078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Catellatospora → Catellatospora vulcania	797	Open in IMG/M
3300018032\|Ga0187788_10319041	All Organisms → cellular organisms → Bacteria → Terrabacteria group	634	Open in IMG/M
3300018058\|Ga0187766_11142067	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300018061\|Ga0184619_10538580	Not Available	512	Open in IMG/M
3300018082\|Ga0184639_10638567	Not Available	517	Open in IMG/M
3300019279\|Ga0184642_1012082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1104	Open in IMG/M
3300019767\|Ga0190267_10374030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	781	Open in IMG/M
3300022195\|Ga0222625_1250705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	503	Open in IMG/M
3300025899\|Ga0207642_10976248	Not Available	545	Open in IMG/M
3300025906\|Ga0207699_11288691	Not Available	541	Open in IMG/M
3300025929\|Ga0207664_11083611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	716	Open in IMG/M
3300026550\|Ga0209474_10725334	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	516	Open in IMG/M
3300027006\|Ga0209896_1009219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1056	Open in IMG/M
3300027909\|Ga0209382_11736689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	611	Open in IMG/M
3300027909\|Ga0209382_12294880	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300028536\|Ga0137415_10580559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	931	Open in IMG/M
3300028587\|Ga0247828_10545688	Not Available	697	Open in IMG/M
3300028754\|Ga0307297_10070091	Not Available	1113	Open in IMG/M
3300028876\|Ga0307286_10102904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1003	Open in IMG/M
3300030336\|Ga0247826_10665414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	805	Open in IMG/M
3300031184\|Ga0307499_10301524	All Organisms → cellular organisms → Bacteria → Terrabacteria group	528	Open in IMG/M
3300031723\|Ga0318493_10199465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1055	Open in IMG/M
3300031723\|Ga0318493_10386125	Not Available	765	Open in IMG/M
3300031724\|Ga0318500_10156658	Not Available	1074	Open in IMG/M
3300031768\|Ga0318509_10599370	Not Available	614	Open in IMG/M
3300031793\|Ga0318548_10290164	All Organisms → cellular organisms → Bacteria → Terrabacteria group	804	Open in IMG/M
3300031832\|Ga0318499_10334132	Not Available	583	Open in IMG/M
3300031846\|Ga0318512_10541182	Not Available	592	Open in IMG/M
3300031879\|Ga0306919_10010160	All Organisms → cellular organisms → Bacteria	5270	Open in IMG/M
3300031879\|Ga0306919_10882824	Not Available	686	Open in IMG/M
3300031890\|Ga0306925_11253012	Not Available	740	Open in IMG/M
3300031890\|Ga0306925_11931406	Not Available	560	Open in IMG/M
3300031897\|Ga0318520_10964715	Not Available	538	Open in IMG/M
3300031901\|Ga0307406_11233761	Not Available	650	Open in IMG/M
3300031901\|Ga0307406_11457337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	601	Open in IMG/M
3300031901\|Ga0307406_11809271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	543	Open in IMG/M
3300031910\|Ga0306923_11628160	Not Available	670	Open in IMG/M
3300032008\|Ga0318562_10185055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	1205	Open in IMG/M
3300032010\|Ga0318569_10564425	Not Available	530	Open in IMG/M
3300032066\|Ga0318514_10464429	Not Available	673	Open in IMG/M
3300032067\|Ga0318524_10269142	Not Available	879	Open in IMG/M
3300032090\|Ga0318518_10186044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1062	Open in IMG/M
3300032261\|Ga0306920_100090357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4522	Open in IMG/M
3300032783\|Ga0335079_10101768	Not Available	3256	Open in IMG/M
3300032828\|Ga0335080_11866190	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.00%
Host-Associated	Host-Associated	19.09%
Engineered	Engineered	0.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.64%
Plants	Host-Associated → Plants	19.09%
Aquatic	Environmental → Aquatic	6.36%
Solid Waste	Engineered → Solid Waste	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.45%
Freshwater	Environmental → Aquatic → Freshwater	3.64%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.64%
Sediment	Environmental → Aquatic → Sediment	2.73%
Grass	Engineered → Solid Waste → Grass	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.45%
Loam	Environmental → Terrestrial → Soil → Loam	13.64%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.73%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.82%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.82%
Sand	Environmental → Terrestrial → Soil → Sand	0.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.91%
Composting	Engineered → Solid Waste → Grass → Composting	0.91%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.09%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.18%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.27%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.36%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.73%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.82%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.82%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.82%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.91%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.91%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.73%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.36%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.55%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.64%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.64%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.73%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.82%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.82%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.82%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.91%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.91%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.91%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459015	Litter degradation PV4	Engineered	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027006	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4PV_00856620	2170459015	Switchgrass, Maize And Mischanthus Litter	VGDKYLSDKPPGILRRKLDKKPVIAALVPKGSQVLRSEDVETVPGPGLKTG
ICCgaii200_07119092	2228664021	Soil	ALRQWGDDYLSEKPPRLLRRKADKKPVVAALVPKGIKSLRADEVEAVPGPGATGSARR
JGI10216J12902_1136443401	3300000956	Soil	GRDLNIALSGLRQWGDEYLSEKPSRLLRRKADKKPVIAAFVPRGAEVLRFDELELVPGPGLKPG*
JGI10220J13317_100005581	3300001139	Soil	LRQWGDAHLSEKPPRLLRRKADRKPVVAALVPRSADVLRPDEVELVPGPGLKTT*
Ga0062593_1005493493	3300004114	Soil	TALRQWGDEHLSEKPPRLLRRKRDKRPVVAALVPQGADVLQLEEVEVVAGPGLKTA*
Ga0062595_1017099822	3300004479	Soil	RDLNIALSGLRQWGDKYLSEKPPRLLRRKADKKPVIAGFVPKGADVLRFDELELVPGPGQKMR*
Ga0062595_1023045041	3300004479	Soil	LTPKGRDLQIAMAGLRQWGDKYLSEKPPRIMRRKSDRRPVIAAFVPKGADVLRPDEIESVPGSGSRSS*
Ga0062592_1020153232	3300004480	Soil	RQWGDAHLSEKPPRLLRRKADRKPVVAALVPRSADVLRPDEVELVPGPGLKTT*
Ga0062594_1016884802	3300005093	Soil	KGLELNLALTGLRQWGDKYLSKRPPRVLRRKSDGKPVIAALVLEGARVLRPDEVESVAGPLH*
Ga0066688_106292133	3300005178	Soil	GRDLNIALAALRQWGDQYLSEKPPRLLRRKADKKAVIAALVPKGAEVVRPDEVESVPGPGRKR*
Ga0066676_106281022	3300005186	Soil	LSGLRQWGDKYVSERPPRVLRRKSDKKPVVAALVPRGTRTLSSEQVELLPGPGLKSA*
Ga0066388_1059312122	3300005332	Tropical Forest Soil	MTALRQWGDEYLTENPPRVLRRKSDGKSVVAALVPEGTRALRPDEVETVAAARMRRV*
Ga0070714_1008821451	3300005435	Agricultural Soil	VSEKPPRLSRRRSDKCRVIAAFVPSGADVLRADEIESVPGPGAADIAG*
Ga0070714_1024911531	3300005435	Agricultural Soil	LTALRQWGDAYLSEQPPMLLRRKADRKPVVAALVPKGTRGLRPDEVETVPGPGFRPT*
Ga0070711_1008249391	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	RVALTALRQWGDRYISEQPPTVMRAKADGRPVIAALIPADQPHLRVDEVESVPGPGA*
Ga0070707_1013593111	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	QWGDKYVSEKPPRITRRKSDKRPVVAAFVPKGAEVLRADEIEVVDGPGLKAG*
Ga0066706_104273891	3300005598	Soil	KYLSEKPPRITRRKSDKRPVVAAFVPKGAEVLRADEIEIVDGPGLKAG*
Ga0066903_1008314163	3300005764	Tropical Forest Soil	MQWGDKYAGAKPPVIVRRKSDKRRVVAALVPAGTEVLRLDELERVPGPGLRSSRTSDQAVTA*
Ga0066903_1014344641	3300005764	Tropical Forest Soil	RQWGDKYLSAKPPRVLRRKRDGKLVVAALVPKGSDVLRADEVEVAPGPGFTAA*
Ga0066903_1031797403	3300005764	Tropical Forest Soil	KGRDLAVTLAGLRQWGDKYLSEKPPRITRRITRRRSDKRPVIAAFVPKGADVVREDELEIVPSPGLKAG*
Ga0066903_1040515991	3300005764	Tropical Forest Soil	WGDKHLSEKPPRLLRRKTDKKPVVAALVPAGTNVLRPAEVETVPGPGYSIGS*
Ga0066903_1042995831	3300005764	Tropical Forest Soil	QLALAGLRQWGDRYLSEKPPRVLRRKIDRKPVVAAFVSKGSDAILKPDEIESVPGPGARLAAAES*
Ga0066903_1064226711	3300005764	Tropical Forest Soil	DKYLSDAPPRLLRTRADRKPVVAALVPKGTAVLRWSDVETVVGPGATRAG*
Ga0066903_1090230871	3300005764	Tropical Forest Soil	WGDKYLSEKPPRITRRRSDKRPVIAAFVPRGADVLREDELESVPGPGLNAG*
Ga0066789_101460211	3300005994	Soil	RDLAVTLAGLRQWGDRYLSEKPPWITRRRWDKRPVIAAFVPTGADVVREDELENVPSPG*
Ga0066656_101897744	3300006034	Soil	RKGRDLDIALSGLRQWGDKYVSERPPRVLRRKSDRKPVVAALVPRGTRTLSSEHVELVPGPGLKSA*
Ga0075417_101571723	3300006049	Populus Rhizosphere	KGRELNVALTALRQWGDAHLSEKPPRILRRKADRKPVVAALVPRSADVLRPDEVELVPGPGLKRT*
Ga0075026_1000895624	3300006057	Watersheds	RLTTKGRDLAVALAGLRQRGDKYVSEKPRWMTRRSRDKRPVIAAFVPTGANVVREDELENVPSPG*
Ga0070712_1018075141	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	RQWGDKYLSDKPPRLLRRKSDRKAVIAALVPKGTEVLRPSEVETVPGPGYARR*
Ga0075421_1006356581	3300006845	Populus Rhizosphere	GLRQWGDKYLNEKPPRLLRRKADKKPVIAGFVPKGADVLRFDELELVPGPGLNVG*
Ga0075421_1009564501	3300006845	Populus Rhizosphere	RQWGDKYASEKPPSVLRRKADGKPVVAALVPKGSRVLRADEVESVPGPGWGAG*
Ga0075421_1026443732	3300006845	Populus Rhizosphere	RQWGDKYLSEKPPRIMRRKSDRRPVIAAFVPKGAEVLRPDEIESVPGPGSRSS*
Ga0075433_106278813	3300006852	Populus Rhizosphere	DLNIALSGLRQWGDKYLNEKPPRLLRRKADKKPVIAAFVPKGADVLRFDELELVPGPGLKVG*
Ga0075425_1005965211	3300006854	Populus Rhizosphere	LRQWGDKYLNEKPPRLLRRKADKKPVIAAFVPKGADVLRFDELELVPGPGLKVG*
Ga0075425_1031593371	3300006854	Populus Rhizosphere	QWGDQYLSKKPPRVTRRKSDKKPVVAAFVPAGADVLRPDEVESVPGPGSRR*
Ga0066709_1039809981	3300009137	Grasslands Soil	RQLNIALTGLRQWGDKYVSEKPPRLLRRKADKKPVIAALVPKGAPVLRPEEVETVPGPGWARPA*
Ga0114129_111013383	3300009147	Populus Rhizosphere	LSGLRQWGDKYLNEKPPRLLRRKADKKPVIAAFVPKGADVLRFDELELVPGPGLKVG*
Ga0105241_126486681	3300009174	Corn Rhizosphere	LELNLALTGLRQWGDKYLSKRPPRVLRRKSDGKPVIAALVLEGARVLRPDEVESVAGPLH
Ga0105242_118346643	3300009176	Miscanthus Rhizosphere	GLRQWGDKYVSEKPPSLLRRKADRKPVIVALVPKGSRVVRADEVESVPGPGWDAR*
Ga0126313_110810141	3300009840	Serpentine Soil	IALSGLRQWGDKYLNEKPPRLLRRKADKKPVIAAFVPKGADVLRFDELELVPGPGLKVG*
Ga0126313_110964531	3300009840	Serpentine Soil	KGRDLNIALSGLRQWGDKYLNEKPPRLLRRKADKKPVIAAFVPKGADVLRPDELELVPGPGLKVG*
Ga0126305_113010301	3300010036	Serpentine Soil	GRDLNIALSGLRQWGDKYLNEKPPRLLRRKADRKPVIAGFVPKGADVLRFDELELVPGPGLKVG*
Ga0126384_119158452	3300010046	Tropical Forest Soil	DKGRELNVALTALRQWGDQHLGEKPPRLLRRKADRKAVIAALVPRSADVLRPDEVELVPGPGLKTA*
Ga0074044_110476992	3300010343	Bog Forest Soil	LTAKGRDLAVTLAGLRQWGDKYLSEKPPRITRRRSDKRPVIAAFVAQGTAVLRPDEIESVPAPGLTAR*
Ga0105239_125560831	3300010375	Corn Rhizosphere	RDLQIALTGLVQWGDKYLSDKPPRITRRKSDKTPVVAAFVPKGAEVLRAEEIEVVDGPGLKAG*
Ga0137391_106465111	3300011270	Vadose Zone Soil	RQWGDRYLSEKPPWITRRRWDKRPVIAAFVPTGADVVREDELENVPSPG*
Ga0137382_106868531	3300012200	Vadose Zone Soil	RKGRDLQIALEGLRQWGDKYVSDKPPRITRRKSDKRPVVAALVPKGAKVLRADEIESVPGPGLKTG*
Ga0137362_116416911	3300012205	Vadose Zone Soil	WGDRYLSEKPPWITRRRWDKRPVIAAFVPTGADVVREDELENVPSPG*
Ga0137368_103545441	3300012358	Vadose Zone Soil	KYLNEKPPRLLRRKADKKPVIAAFVPKGANVLRPDELELVPGPGLKAG*
Ga0137375_106930801	3300012360	Vadose Zone Soil	RQWGDKYLNEKPPRLLRRKADKKPVIAAFVPKGADVLRFDELELVPGPGLKVG*
Ga0157293_101228881	3300012898	Soil	DLQIALTGLVQWGDKYLSDKPPRITRRKSDKRPVVAAFVPKGAEVLRAEEIEVVDGPGLKAG*
Ga0157299_102731562	3300012899	Soil	VQWGDKYVSEKPPRITRRKSDKRPVVAAFVPKGAEVLRADEIEVVDGPGLKAG*
Ga0164299_102138302	3300012958	Soil	VQWGDKYLSDKPPRITRRKSDKRPVVAAFVPKGAEVLRAEEIEVVDGPGLKAG*
Ga0126369_113261861	3300012971	Tropical Forest Soil	LAGLRQWGDKYLSEKPPRITRRITRRRSDKRPVIAAFVPKGADVVREDELEIVPSPGLKAG*
Ga0164308_103168382	3300012985	Soil	GLRQWGDKYVSEKPPTLLRRKSDRKQVVAALVPKGSETLRYEDVELVPGPGRRAE*
Ga0182008_106252752	3300014497	Rhizosphere	RQWGDAYLSEKPPTVLRRRSDGKQVVAALVPKGTKGLRFDEVEVVPGPGAKR*
Ga0173478_105684691	3300015201	Soil	RELNVALTALRQWGDAHLSEKPPRLLRRKADRKPVVAALVPRSADVLRPDEVELVPGPGLKTT*
Ga0132258_116897511	3300015371	Arabidopsis Rhizosphere	NVALTALRQWGDKHLSEKPPRLLRRKSDRKPVIAALVPRGADVLRAEDVETVPGPGFAGPD*
Ga0132257_1022899072	3300015373	Arabidopsis Rhizosphere	TALRQWGDEYLSDRPPRLLVRKADRAPVVVALVPEGTDVLRADEVETIPGPGLARG*
Ga0132255_1032560802	3300015374	Arabidopsis Rhizosphere	TALGQWGDEYLSDRPPRLLVRKADRAPVVVALVPKGTDVLRADEVETIPGPGLARG*
Ga0182033_107655281	3300016319	Soil	GLRQWGDKYLSEKPTRITRRRSDKRPVIAAFVPKGADVVREDELEIVPSPGLNAG
Ga0187809_100389333	3300017937	Freshwater Sediment	LAGLRQWGDKYLSEQPPRITQRKADKRPVIAAFVPIGTEVLRADELESVPGPGLKSA
Ga0187817_100664711	3300017955	Freshwater Sediment	AKGRDLAVTLAGLRQWGDKYLSEKPPRIARRRSDKRPVIVAFVPQGADVLRPNEIETVPGPGLKTS
Ga0187776_108090722	3300017966	Tropical Peatland	GRELRVALAGLRQWGDDYCSPQPPTLLRRASDGKRVVAALVPEGATNIVGPDEVETVPGPGASV
Ga0187780_105910782	3300017973	Tropical Peatland	QWGDKYLSEKPPRITRRRSDKRPVIAAFVPTGADVVREDELESIPGPGLKAG
Ga0187788_103190411	3300018032	Tropical Peatland	LAGLRQWGDKYLSEKPPRITRRRSDKRPVIAAFVPEGADVVPEDQLESVLAPG
Ga0187766_111420671	3300018058	Tropical Peatland	KGRDLAVTLAGLRQWGDKYLSEKPPRITRRRSDKRPVIAAFVPTGADVVREDELESIPGPGLKAG
Ga0184619_105385801	3300018061	Groundwater Sediment	LAGLRQWGDKYMSEKPPTVLRRKADKKPVIAALVPKGTDTVRAEELELVPGPGRTTH
Ga0184639_106385672	3300018082	Groundwater Sediment	LRQWGDKYLNEKPPRLLRRKADKKPVIAAFVPKGADVLRFDELELVPGPGLKVG
Ga0184642_10120823	3300019279	Groundwater Sediment	RQWGDKYLSEKPSRLLRRKADKNPVIAAFVPRGADVLRFDELELVPGPGLKVG
Ga0190267_103740303	3300019767	Soil	ALSGLRQWGDKYLSEKPPRLLRRKADKQPVIAAFVPKGADVLRFDELELVPGPGLKVG
Ga0222625_12507051	3300022195	Groundwater Sediment	AKGRDLNIALSGLRQWGDKYLSEKPSRLLRRKADNQPVIAAFVPKGADVLRFDEVELVPGPGLKVG
Ga0207642_109762482	3300025899	Miscanthus Rhizosphere	KGLELDVALTALRQWGDKYLSDKPPRLLRRKSDNKAVIAALVPKGTDVLRPSEVETVRGPGYVRRFSEPAPS
Ga0207699_112886911	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	LNVALTALRQWGDAYLSEQPPMLLRRKADRKPVVAALVPKGTRGLRPDEVETVPGPGFRP
Ga0207664_110836112	3300025929	Agricultural Soil	QWGDAYVSEKPPRLSRRRSDKRRVIAAFVPSGAAVLRADEIESVPGPGAADIAG
Ga0209474_107253341	3300026550	Soil	KYRSEKPPTLLRRKTDKKPVVAALVPQGTDVLQVEEVELVPGPGRTTT
Ga0209896_10092193	3300027006	Groundwater Sand	DKYLNEKPPRLLRRKADKKPVIAAFVPKGADVLRFDELELVPGPGLKVG
Ga0209382_117366892	3300027909	Populus Rhizosphere	RQWGDKYLSEKPPRIMRRKSDRRPVIAAFVPKGAEVLRPDEIESVPGPGSRSS
Ga0209382_122948801	3300027909	Populus Rhizosphere	RQWGDKYASEKPPSVLRRKADGKPVVAALVPKGSRVLRADEVESVPGPGWGAR
Ga0137415_105805592	3300028536	Vadose Zone Soil	LHLALAGLRQWGDKHVSERPPRILRRKADQKPVVAALVPKGTPVLRPGEVELVPGPGLKS
Ga0247828_105456881	3300028587	Soil	WGDKYLNQKPPRLLRRKADKKPVIAAFVPKGADVLRFDELELVPGPGLKVG
Ga0307297_100700912	3300028754	Soil	NIALSGLRQWGDKYLNEKPPRLLRRKADKKPVIAAFVPKGADVLRFDELELVPGPGLKVG
Ga0307286_101029041	3300028876	Soil	GRDLNIALSGLRQWGDKYLNEKPPRLLRRKADRKPVIAGFVPKGADVLRFDELELVPGPGLKVG
Ga0247826_106654141	3300030336	Soil	SGLRQWGDKYLNEKPPRLLRRKADKKPVIAGFVPKGADVLRFDELELVPGPGLNVG
Ga0307499_103015241	3300031184	Soil	RELDIALTALRQWGDKHVSEKPPRLLRRKADRKPVVVALVPKGADVLRPEEVETVPGPGLTAA
Ga0318493_101994651	3300031723	Soil	YLSEKPPRITRRRSDKRPVIAAFVPEGADVVREDELESVPGPGLKAG
Ga0318493_103861251	3300031723	Soil	RQWGDKYLSEKPPRITRRRSDKRPVIAAFVPEGADVVREDELESVPGPGLTAG
Ga0318500_101566581	3300031724	Soil	WGDTYLSEKPPRLLRRKTDRKPVVAALVPKGTPVLRAEEVETVPGPGLATG
Ga0318492_107774311	3300031748	Soil	YLSERPPRITRRRSDKRPVIAAFVPEGADVVREDELESVPGPGLKAG
Ga0318509_105993701	3300031768	Soil	VTLAGLRQWGDKYLSEKPPRITRRRSDKRPVIAAFVPKGADVVREDELESVPGPGLK
Ga0318548_102901643	3300031793	Soil	AGLRQWGDKYLSEKPPRITRRRSDKRPVIAAFVPKGADVVREDELESVPGPG
Ga0318499_103341321	3300031832	Soil	TAKGRDLAVTLAGLRQWGDKYLSEKPPRITRRRSDKRPVIAAFVPEGADVVREDELESVPGPGLTAG
Ga0318512_105411822	3300031846	Soil	LALAGLRQWGDKHLSEKPPRLMRRKSDGQPVIAALVPEGAPVLRADEVETVPGPGASVPV
Ga0306919_100101606	3300031879	Soil	TPKGRDLGIALAGLRQWGDKYLSQEPPRITRRRSDKRPVIAAFVPEGSAVLRDNEIETVPARAPALSGDRG
Ga0306919_108828241	3300031879	Soil	TKGRDLAVTLAGLRQWGDKYLSEKPPRITRRRSDKRPVIAAFVPKGADVVREDELESVPGPGLK
Ga0306925_112530121	3300031890	Soil	AVTLAGLRQWGDKYLSEKPPRITRRRSDKRPVIAAFVPKGAEVVREDELESVPGPGLKSR
Ga0306925_119314061	3300031890	Soil	GRDLAVTLAGLRQWGDKYLSEKPPRITRRRSDKRPVIAAFVLKGTDVVREDELESVPGPGLKAG
Ga0318520_109647151	3300031897	Soil	LAGLRQWGDKYLSEKPPRITRRRSDKRPVIAAFVLKGTDVVREDELESVPGPGLKAG
Ga0307406_112337611	3300031901	Rhizosphere	RQWGDKYLNEKPPRLLRRKADRKPVIAGFVPKGADVLRFDELELVPGPGLKVG
Ga0307406_114573372	3300031901	Rhizosphere	ALSGLRQWGDKYLNEKPPRLLRRKADKKPVIAAFVPKGADVLRFDELELVPGPGLKVG
Ga0307406_118092712	3300031901	Rhizosphere	ALELDVALTALRQWGDKHISDRPPRLLRRKADNKQVIAALVPKGARVLRPEEVETVPGPGLKTSQSAGAR
Ga0306923_116281601	3300031910	Soil	WGDKYLSEKPPRITRRRSDKRPVIAAFVPKGADVVREDELESVPGPGLK
Ga0318562_101850551	3300032008	Soil	IALTALRQWGDTYLSEKPPRLLRRKTDRKPVVAALVPKGTPVLRAEEVETVPGPGLATG
Ga0318569_105644251	3300032010	Soil	ARGRDLAVTLAGLRQWGDKYLSEKPPRITRRRSDKRPVIAAFVPEGADVVREDELESVPGPGLTAG
Ga0318514_104644291	3300032066	Soil	LTARGRDLAVTLAGLRQWGDKYLSEKPPRITRRRSDKRPVIAAFVPEGADVVREDELESVPGPGLTAG
Ga0318524_102691421	3300032067	Soil	ALAGLRQWGDKHLSEKPPRLMRRKSDGQPVIAALVPEGAPVLRADEVETVPGPGASVAVT
Ga0318518_101860442	3300032090	Soil	GLRQWGDKYLSEKPPRITRRRSDKRPVIAAFVLKGTDVVREDELESVPGPGLKAG
Ga0306920_1000903576	3300032261	Soil	GRDLAVTLAGLRQWGDKYLSEKPPRITRRRSDKRPVIAAFVPEGADVVREDELESVPGPGLTAG
Ga0335079_101017681	3300032783	Soil	DLQIAMAGLRQWGDKYLSEQPPRITRRKSDKRLVVAAFVPEGTEVLRAEELESVPGPGA
Ga0335080_118661901	3300032828	Soil	LRQWGDRYLSEKPPRLLRRKSDGTPVVAALVPKGSPALRPDEVESVPGPGA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087528

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences