Basic Information | |
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Family ID | F087527 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 110 |
Average Sequence Length | 62 residues |
Representative Sequence | VEELEKLPPTAWGLIAAAAILGFAAAWLWRWYRQYRMRAALRTAVTAAGSDHLVDMLVPDGMGG |
Number of Associated Samples | 98 |
Number of Associated Scaffolds | 110 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 0.00 % |
% of genes near scaffold ends (potentially truncated) | 0.00 % |
% of genes from short scaffolds (< 2000 bps) | 0.00 % |
Associated GOLD sequencing projects | 92 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.42 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (100.000 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (10.000 % of family members) |
Environment Ontology (ENVO) | Unclassified (30.909 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (39.091 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Transmembrane (alpha-helical) | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 57.61% β-sheet: 0.00% Coil/Unstructured: 42.39% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.42 |
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Pfam ID | Name | % Frequency in 110 Family Scaffolds |
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PF00291 | PALP | 25.45 |
PF14821 | Thr_synth_N | 7.27 |
PF08544 | GHMP_kinases_C | 1.82 |
PF13478 | XdhC_C | 0.91 |
PF07883 | Cupin_2 | 0.91 |
PF12802 | MarR_2 | 0.91 |
PF13840 | ACT_7 | 0.91 |
PF00069 | Pkinase | 0.91 |
COG ID | Name | Functional Category | % Frequency in 110 Family Scaffolds |
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COG0515 | Serine/threonine protein kinase | Signal transduction mechanisms [T] | 3.64 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 100.00 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 10.00% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 8.18% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 6.36% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 5.45% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 5.45% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 4.55% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 4.55% |
Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 4.55% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 4.55% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 3.64% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 3.64% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 2.73% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 2.73% |
Boreal Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil | 2.73% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 1.82% |
Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 1.82% |
Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 1.82% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 1.82% |
Termite Gut | Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut | 1.82% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 1.82% |
Attine Ant Fungus Gardens | Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens | 1.82% |
Bog Forest Soil | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil | 0.91% |
Bog | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog | 0.91% |
Iron-Sulfur Acid Spring | Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring | 0.91% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 0.91% |
Bulk Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil | 0.91% |
Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 0.91% |
Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 0.91% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 0.91% |
Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 0.91% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 0.91% |
Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 0.91% |
Fen | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen | 0.91% |
Palsa | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa | 0.91% |
Plant Litter | Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter | 0.91% |
Weathered Mine Tailings | Environmental → Terrestrial → Geologic → Mine → Unclassified → Weathered Mine Tailings | 0.91% |
Ectomycorrhiza | Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza | 0.91% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.91% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.91% |
Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere | 0.91% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 0.91% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300001661 | Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly) | Environmental | Open in IMG/M |
3300004080 | Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3 | Environmental | Open in IMG/M |
3300004081 | Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2) | Environmental | Open in IMG/M |
3300005171 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 | Environmental | Open in IMG/M |
3300005260 | Microbial communities on the surface of kaolinite enhanced biochar from soil with fertiliser in Sydney, Australia | Environmental | Open in IMG/M |
3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Environmental | Open in IMG/M |
3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Environmental | Open in IMG/M |
3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Environmental | Open in IMG/M |
3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Host-Associated | Open in IMG/M |
3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Environmental | Open in IMG/M |
3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Environmental | Open in IMG/M |
3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Environmental | Open in IMG/M |
3300005540 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 | Environmental | Open in IMG/M |
3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Environmental | Open in IMG/M |
3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Environmental | Open in IMG/M |
3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Host-Associated | Open in IMG/M |
3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Host-Associated | Open in IMG/M |
3300005602 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 | Environmental | Open in IMG/M |
3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Host-Associated | Open in IMG/M |
3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Environmental | Open in IMG/M |
3300006791 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 | Environmental | Open in IMG/M |
3300006804 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 | Environmental | Open in IMG/M |
3300006893 | Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG | Environmental | Open in IMG/M |
3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Host-Associated | Open in IMG/M |
3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Host-Associated | Open in IMG/M |
3300009826 | Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1 | Host-Associated | Open in IMG/M |
3300010043 | Tropical forest soil microbial communities from Panama - MetaG Plot_26 | Environmental | Open in IMG/M |
3300010049 | Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3 | Host-Associated | Open in IMG/M |
3300010371 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1 | Environmental | Open in IMG/M |
3300010373 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4 | Environmental | Open in IMG/M |
3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Host-Associated | Open in IMG/M |
3300010866 | Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300010877 | Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300010880 | Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300011270 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG | Environmental | Open in IMG/M |
3300011271 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG | Environmental | Open in IMG/M |
3300012089 | Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ008 MetaG | Host-Associated | Open in IMG/M |
3300012181 | Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG | Host-Associated | Open in IMG/M |
3300012203 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG | Environmental | Open in IMG/M |
3300012285 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG | Environmental | Open in IMG/M |
3300012349 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG | Environmental | Open in IMG/M |
3300012923 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG | Environmental | Open in IMG/M |
3300012925 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300012927 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300012982 | Weathered mine tailings microbial communities from Hibbing, Minnesota, USA - DCWfield | Environmental | Open in IMG/M |
3300012987 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG | Environmental | Open in IMG/M |
3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Host-Associated | Open in IMG/M |
3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Host-Associated | Open in IMG/M |
3300014168 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG | Environmental | Open in IMG/M |
3300017970 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG | Environmental | Open in IMG/M |
3300020583 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M | Environmental | Open in IMG/M |
3300021168 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M | Environmental | Open in IMG/M |
3300021170 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M | Environmental | Open in IMG/M |
3300021171 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M | Environmental | Open in IMG/M |
3300021401 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O | Environmental | Open in IMG/M |
3300021403 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O | Environmental | Open in IMG/M |
3300021444 | Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02 | Environmental | Open in IMG/M |
3300021475 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O | Environmental | Open in IMG/M |
3300021478 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M | Environmental | Open in IMG/M |
3300022726 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300024330 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction) | Environmental | Open in IMG/M |
3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) | Environmental | Open in IMG/M |
3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026329 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes) | Environmental | Open in IMG/M |
3300027537 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes) | Environmental | Open in IMG/M |
3300027583 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes) | Environmental | Open in IMG/M |
3300027590 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes) | Environmental | Open in IMG/M |
3300027681 | Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes) | Environmental | Open in IMG/M |
3300027905 | Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes) | Environmental | Open in IMG/M |
3300027965 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2 (SPAdes) | Environmental | Open in IMG/M |
3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300028573 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG | Host-Associated | Open in IMG/M |
3300028781 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_3 | Environmental | Open in IMG/M |
3300030764 | Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLI1 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300030946 | Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA7 EcM (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300030967 | Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 Emin (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300031446 | Fir Summer Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031708 | FICUS49499 Metagenome Czech Republic combined assembly | Environmental | Open in IMG/M |
3300031720 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515 | Environmental | Open in IMG/M |
3300031740 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05 | Environmental | Open in IMG/M |
3300031820 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515 | Environmental | Open in IMG/M |
3300031902 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2 | Environmental | Open in IMG/M |
3300031962 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515 | Environmental | Open in IMG/M |
3300032515 | FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data) | Environmental | Open in IMG/M |
3300032892 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5 | Environmental | Open in IMG/M |
3300032896 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4 | Environmental | Open in IMG/M |
3300032954 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2 | Environmental | Open in IMG/M |
3300033004 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4 | Environmental | Open in IMG/M |
3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Host-Associated | Open in IMG/M |
3300033475 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI12053J15887_101289701 | 3300001661 | Forest Soil | VEELEKLPPTAWGLIAAAAIFGFAAAWIWRWYRQYRMRAALRTAVTGAGSDHLVDMLVPDGMGGGFHVDFLLL |
Ga0062385_103016362 | 3300004080 | Bog Forest Soil | LEELSNLPPTAWAMIGGAAAVGFGISWLWRWYRNYSARKALRAAVTAAGSDHLV |
Ga0063454_1011621381 | 3300004081 | Soil | VEELEKLPPTAWALIAAAAVLGFAAAWVWRWYRQYRMRSALRAAVTAVGSDHLVDTLVPDGMGGGF |
Ga0066677_102729362 | 3300005171 | Soil | LEELKNLPPTAWVLIAGAAVLGFGLSWLWRWYRQYRTRKALRTAVTAAGSEHLVDMLVPDGMGGGFHVDFLLLT |
Ga0074072_10631662 | 3300005260 | Soil | VEELEKLPPTAWALIAAAAVLGFTAAWVWRWYRQYRMRSALRAAVTAVGSDYLVDTLV |
Ga0070683_1007780781 | 3300005329 | Corn Rhizosphere | VEELENLPPTAWALIVAAAILGFAAAWVWRWYRAYRLRAALRAVVTAAGSDNLVDMLVPDGMGGGFHVDFLLL |
Ga0070683_1010478811 | 3300005329 | Corn Rhizosphere | VDELKNLSPTAWALIVGAAVVGFVGSWLWRWYRQYSARKALRAAV |
Ga0070683_1010776122 | 3300005329 | Corn Rhizosphere | LEELSNLPPTAWALIVCAAAVGFGISWLWRWYRQYAARKVLRAAVTAAGSDHLVDMLVPDGMG |
Ga0070690_1004832811 | 3300005330 | Switchgrass Rhizosphere | VEELEKLPPTAWALIAAAAVLGFTAAWVWRWYRQYRMRSALRAAVTAVGSDHLVDTLVPDGMGG |
Ga0070680_1005387361 | 3300005336 | Corn Rhizosphere | VEDLQKLPPTAWVLIAAAAVLGFAGSWLWRWYRQYANRKALRAAVTSAGSDHLVDMLVPDGMGAG |
Ga0070661_1018054871 | 3300005344 | Corn Rhizosphere | LEELSNLPPTAWALIVCAAAAGFGISWLWRWYRQYAARKVLRAAVTAAGSDHLVDMLVPDGM |
Ga0070713_1015310851 | 3300005436 | Corn, Switchgrass And Miscanthus Rhizosphere | VEELAKLPPTAWALIAGAVVLGFGLSWAWRWYRHYRARKALRGAVTGAASDHLVNALVPDGMGGGFH |
Ga0070711_1010692111 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | VDELRNLPPTAWALIVGAAVVGFVGSWLWRWYRQYSARKALRAAVTAAGSDHLVDMLVPDGMGGG |
Ga0070684_1000873624 | 3300005535 | Corn Rhizosphere | LEELSNLPPTAWALIACAAGVGFGISWLWRWYRQYAARKVLRAAVTAAGSDHLVDMLVPDGMGGGFHV |
Ga0066697_107163571 | 3300005540 | Soil | VNDLSQLPPTAWVLIACAAALGFGAALAWRWYGHYRARKALRVAVTGGAADHLIDTLVP |
Ga0070686_1006269581 | 3300005544 | Switchgrass Rhizosphere | VEELEKLPPTAWGLIAAAAILGFAAAWIWRWYRQYRMRAALRTAVTAAGSDHLVDMLVPDGMGGGFHVDFLLLTT |
Ga0070693_1009933362 | 3300005547 | Corn, Switchgrass And Miscanthus Rhizosphere | VDELAKLPPTAWALIAGAVVLGFGLSWAWRWYRHYRARKALRGAVTGAASDHLVNALVPDGMGGGF |
Ga0068855_1000114511 | 3300005563 | Corn Rhizosphere | VEDLQKLPPTAWVLIATAAVLGFVGHWAWRWYRQYSNRKALRAAVTAAGSDHLVDMLVPDGMGAGFHVDFLLL |
Ga0068855_1024759722 | 3300005563 | Corn Rhizosphere | LEELSNLPPTAWALIVCAAAVGFGISWLWRWYRQYAARKVLRAAVTAAGSDHL |
Ga0068857_1009228502 | 3300005577 | Corn Rhizosphere | LEELSNLPPTAWALIACAAGVGFGISWLWRWYRQYAARKVLRAAVTAAGSDH |
Ga0070762_111687032 | 3300005602 | Soil | LSNLPPTAWVLIGGAAAVGFGISWLWRWYRNYSARKILRAAVTAAGSDHLVDMLVP |
Ga0068856_1019474242 | 3300005614 | Corn Rhizosphere | VDELRNLPPTAWVLIAGAALVGFVGSWLWRWYRQYSARKALRAAVTAAGSDHLV |
Ga0066903_1058365582 | 3300005764 | Tropical Forest Soil | VFEDLQKLPPTAWVLIVVAAVLGFAGSWLWRWYRQYSTRKALRAAVTAAGSDHLVDMLVPDGMGAGF |
Ga0070712_1018126562 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | VEDLQKLPPTAWVLIAAAAVLGFAGSWLWRWYRQYANRKALRAAVTAAGSDHLVDMLVPDGMGA |
Ga0066653_103062421 | 3300006791 | Soil | VNDLSQLPPTAWVLIACAAALGFGAALAWRWYGHYRARKALRVAVTGGAADHLIDTLVPD |
Ga0079221_109133151 | 3300006804 | Agricultural Soil | VAEIEKLPPTAWVLIAIAAAGGFGISWLWRWYRQYSARKSLRMAVTATGSDHCIDVLVPDGMGGGFHVDFLLLTSRG |
Ga0079221_115549221 | 3300006804 | Agricultural Soil | VDEIERLPPTAWALIAIAAALGFGISWLWRWYRQYSARKSLRMAVTATGS |
Ga0073928_108895622 | 3300006893 | Iron-Sulfur Acid Spring | VDELEKLSPTAWVLIAVAAVLGFAAAWIWRWYRQYRMRAALRAAVTAAGADHLVDMLVPDGMGGGFHVDFL |
Ga0105240_104764361 | 3300009093 | Corn Rhizosphere | VDEIEKLPPTAWALIAAAAGLGFGVSWLWRWYRQYSARKSLRMAVTATGSDHVVDVLVPDGMGGGFHVDFLL |
Ga0105248_104753181 | 3300009177 | Switchgrass Rhizosphere | VEELEKLPPTAWALIAAAAVLGFAAAWVWRWYRQYRMRSALRAAVTAVGSDHLVDTLVPD |
Ga0123355_101546704 | 3300009826 | Termite Gut | VEELSRLPASTTWAIIAGAAGVGFGLSWFLRWYRQYAAR |
Ga0126380_116222052 | 3300010043 | Tropical Forest Soil | VEELEKLPPTAWALIAAAAVLGFVAAWIWRWYRQYRRRAALRSAVTAAGSDYLVDMLVPDGMGGGFHVDFL |
Ga0123356_101643243 | 3300010049 | Termite Gut | VDELRGLSPAAWALLAGAAALVFGVSRAWRGYRRHRERKALRAAVTGGCTDHLIDKL |
Ga0134125_115236431 | 3300010371 | Terrestrial Soil | VEDLQKLPPTAWVLIAAAAVLGFAGHWLWRWYRQYSNRKALRAAVTAAGSDHLVDMLVPDGMG |
Ga0134128_100267871 | 3300010373 | Terrestrial Soil | VEDLQKLPPTAWVLIATAAVLGFVGHWAWRWYRQYSNRKALRAAVTAAGSDHLVDMLVPDGMGAGFHVDFLLLTAR |
Ga0134128_122744811 | 3300010373 | Terrestrial Soil | VDELQKLTPTAWVLIAAAAALGFGVALGWRWYRHYRARKALRAAVTAGASDHMIDV |
Ga0134128_128033461 | 3300010373 | Terrestrial Soil | VDEIGKLPPTAWVLIAIAAALGFGISWLWRWYRQYAARKSLRMAVTATGSDHVVDVLVPDGMGAGFHVDFL |
Ga0105239_104301171 | 3300010375 | Corn Rhizosphere | VDELQKLTPTAWVLIAAAAALGFGVALGWRWYRHYRARKALRAAVTAGASDHMIDVL |
Ga0126344_13055111 | 3300010866 | Boreal Forest Soil | VEELEKLPPTAWALIAAAAVLGFVAAWVWRWYRQYRMRSALRAAVTAAGSDHLVDMLVPDGMGGGFH |
Ga0126356_107345161 | 3300010877 | Boreal Forest Soil | VEELEKLPPTAWALIAAAAVLGFGAAWVWRWYRQYRMRSALRTAVTAAGSDH |
Ga0126350_118196541 | 3300010880 | Boreal Forest Soil | MIGGAAAVGFGISWLWRWYRNYSARKALRAAVTAAGSDNLVDMLVPDGMGGGFHV |
Ga0137391_110983851 | 3300011270 | Vadose Zone Soil | VEELEKLPPTAWGLIAAAAILGFAAAWLWRWYRQYRMRAALRTAVTAAGSDHL |
Ga0137393_109726891 | 3300011271 | Vadose Zone Soil | VEELEKLPPTAWALIAAAAVLGFVAAWVWRWYRQYRMRSALRAAVTAAGSDHLVDMLVPDGMGGGFHVDFLLLT |
Ga0153924_10979152 | 3300012089 | Attine Ant Fungus Gardens | VDELRRLPPIAWILIGCAAALGFVLAWAWRWYRKYRARKALRAAVTAGCSDYLVDMLVPDGMGGGFHV |
Ga0153922_11176121 | 3300012181 | Attine Ant Fungus Gardens | MAWVLIGAAVLLGFGLALAWRWYRHYRARRALRAAVTAGASDHLIDSLVPDGMGG |
Ga0137399_108857331 | 3300012203 | Vadose Zone Soil | VDELSNLSPTAWALIAGAAALGFAISWLWRWYRQYSARKALRAAVTAAGS |
Ga0137370_104669572 | 3300012285 | Vadose Zone Soil | VNDLSQLPPTAWVLIALAAALGFGAALAWRWYRHYRARKALRVAVTGGAVDHLVNALVPDGMG |
Ga0137387_108404011 | 3300012349 | Vadose Zone Soil | VEELEKLPPTAWGLIAAAAILGFAAAWLWRWYRQYRMRAALRTAVTAAGSDHLVDMLVPDGMGG |
Ga0137359_117731922 | 3300012923 | Vadose Zone Soil | VEELEKLPPTAWGLIAAAAILGFAAAWVWRWYRQYRMRAALRTAVTAAGSDHLVDMLVPDGIGGGFHVDFLLLT |
Ga0137419_118479601 | 3300012925 | Vadose Zone Soil | VNELSQLPPTAWVLIACAAALGFGVALAWRWYRQYRARKALRVAVTGGAADHLVDTLVPDGMGG |
Ga0137416_107874461 | 3300012927 | Vadose Zone Soil | LEELKNLPPTAWVLVAGAAVLGFGLSWLWRWYRQYRTRKALRTAVTAAGSENLVDMLVPDGMGGG |
Ga0168317_10414452 | 3300012982 | Weathered Mine Tailings | LSNLPPTAWALIACAAALGFGISWLWRWYRQYAARKVLRAAVTAAGS |
Ga0164307_103598431 | 3300012987 | Soil | VDELQKLTPTAWVLIAAAAALGFGVALGWRWYRHYRARKALRAAVTAGASDHMIDVLV |
Ga0157370_102724381 | 3300013104 | Corn Rhizosphere | VEDLQKLPPTAWVLIATAAVLGFAGHWLWRWYRQYSNRKALRAAVTAAGSDHLVDMLVPDGMGAGFHVDFLLLTAR |
Ga0157370_114950561 | 3300013104 | Corn Rhizosphere | VDEIEKLPPTAWALIAAAAGLGFGVSWLWRWYRQYSARKSLRMAVTATGS |
Ga0157372_110136822 | 3300013307 | Corn Rhizosphere | VDELKNLSPTAWALIVGAAVVGFVGSWLWRWYRQYSARKALRAAVTAAGSDHLVDMLVPDGMGGGFHVDF |
Ga0181534_109849031 | 3300014168 | Bog | VNEELSKLTPTAWGLIVAAAAIGFALSWAWRWYRQYRARKALRAAVTAGTSEHLIDMLV |
Ga0187783_100104101 | 3300017970 | Tropical Peatland | VDELKRLPPTAWILIACALVLGFALALLWRWYRRYRARRALRTAVTSSSSDHLMDSLVPDGMGGAFHVDYLL |
Ga0210401_114616661 | 3300020583 | Soil | LEELSNLPPTAWVMIGGAAAVGFGISWLWRWYRNYSARKALRAAVTAAGSDH |
Ga0210406_112458191 | 3300021168 | Soil | VNDLSKLPPTAWVLIACAAALGFGVSLAWRWYRHYRARKALRVAVTGGAADHLVDTLVPDGM |
Ga0210400_108572462 | 3300021170 | Soil | LEELSNLPPTAWVLIGGAAALGFALSWLWRWYRQYSNRKALRAAVTAAGSDHLVDMLVPDGMGGGF |
Ga0210405_114188932 | 3300021171 | Soil | VEELSKLTPTAWALIGCAAALGFGLSWAWRWYRQYRARKALRAAVTGGCSDHLIDMLVPDGM |
Ga0210393_107129822 | 3300021401 | Soil | MEELRNLTPTAWAMIAAAAVLGFAAAWLWRWYRQYRMRAALRAAVTAAGSDHLVD |
Ga0210397_103133542 | 3300021403 | Soil | VNELGKLSATAWMLIAGAAVFGFAAAFAWRWYRHYRARKALRAAVTDGATDHLIDSLVPDGMGGGFH |
Ga0213878_103950161 | 3300021444 | Bulk Soil | MQELGKLSHTAWALIACAAVLGFALSWAWRWYRQYRARTALRSAVTGGAVEHLVDSL |
Ga0210392_111902961 | 3300021475 | Soil | LSNLPPTAWVMIGGAAAVGFGISWLWRWYRNYSARKALRAAVTAAGSDHLVDMLVPD |
Ga0210402_105005562 | 3300021478 | Soil | VDELTKLTPTAWALIGIAAALGFALSWAIRWYRHYRARKALRAAVTGGTSEHLIDTLVPDGMGAGFHVDYVL |
Ga0242654_103583941 | 3300022726 | Soil | VEELEKLPPTAWALIAAAAVLGFAAAWLWRWYRQYRMRSALRAAVTAAGSDHLVDMLVPDGMGGGFHVD |
Ga0137417_12310052 | 3300024330 | Vadose Zone Soil | VNDLSQLPPTAWVLIASAAALGFGAALAWRWYRQYRARKALRVAVTGGAADHMADVLVPDGMGGG |
Ga0207695_102296581 | 3300025913 | Corn Rhizosphere | LEELSNLPPTAWGLIITAAAVGFGISWLWRWYRQYSARKALRAAVTAAGSDHLVDMLVPDGMGGGFHVDFLL |
Ga0207671_108274221 | 3300025914 | Corn Rhizosphere | VEELEKLPPTAWALIAAAAVLGFAAAWVWRWYRQYRMRSALRAAVTAVGSDHLVDTLVP |
Ga0207693_108875932 | 3300025915 | Corn, Switchgrass And Miscanthus Rhizosphere | LEELSNLPPTAWGLIIGAAAVGFGISWLWRWYRQYAARKVLRAA |
Ga0207709_108478861 | 3300025935 | Miscanthus Rhizosphere | VDELQKLTPTAWVLIAAAAALGFGVALGWRWYRHYRARKALRAAVTAGASDHMIDVLVPDGMGGGGFHVD |
Ga0207661_112554802 | 3300025944 | Corn Rhizosphere | LEELSNLPPTAWALIVCAAAVGFGISWLWRWYRQYAARKVLRAAVTAAGSDHLVDMLVPDGMGGGFHVDFLLLTA |
Ga0207702_125241431 | 3300026078 | Corn Rhizosphere | LEELSNLPPTAWGLIIGAAAVGFGISWLWRWYRQYAARKVLRAAVTAA |
Ga0207674_120623481 | 3300026116 | Corn Rhizosphere | LEELSNLPPTAWALIACAAGVGFGISWLWRWYRQYAARKVLRAAVTAAGSDHR |
Ga0207675_1003228792 | 3300026118 | Switchgrass Rhizosphere | VEELEKLPPTAWGLIAAAAILGFAAAWIWRWYRQYRMRAALRTAVTAAGSDHLVDML |
Ga0207698_118193152 | 3300026142 | Corn Rhizosphere | VDEIEKLPPAAWVLIGAAAAVGFGVSWVWRWYRQYSARKSLRQAVTAAGSDHTVDVLVPDGMGGGFHVD |
Ga0209375_12184192 | 3300026329 | Soil | VNDLSQLPPTAWVLIACAAALGFGAALAWRWYRHYRARKALRVAVTGGAADHLVNALVPDGMGGGFHV |
Ga0209419_10089063 | 3300027537 | Forest Soil | VNDLSQLPPTAWVLIACAAALGFGAALAWRWYRQYRARKALRVAVTGGAADHLVDRLVPD |
Ga0209527_10234982 | 3300027583 | Forest Soil | VNDLSQLPPTAWVLIACAAALGFGAALAWRWYRQYRARKALRVAVTGGAADHLVDRLVPDGMGGGF |
Ga0209116_10035961 | 3300027590 | Forest Soil | MNVDELRHLSPTVWTLIAGAAAVGFVLSWAWRWYRQYRARKALRAAVTAGSAEHLIDTLVPDGMGGGFHIDFLLLTL |
Ga0208991_12045721 | 3300027681 | Forest Soil | VEELEKLPPTAWGLIAAAAVLGFAAAWVWRWYRQYRMRAALRTAVTGAGSDHLVDMLVPDGMGGGFH |
Ga0209415_105554672 | 3300027905 | Peatlands Soil | LEELSNLPPTAWIMIGGAAALGFGISWLWRWYRNYSARKALRAAVTAAGSDHLV |
Ga0209062_12287861 | 3300027965 | Surface Soil | VDEIEKLPPAAWVLIAVAAALGFGISWLWRWYRAYRARKSLRMAVTAAG |
Ga0268264_105156772 | 3300028381 | Switchgrass Rhizosphere | LEELSNLPPTAWVLIVSAAALGFGISWLWRWYRQYSVRKALRAAVTAAGSDHLVDMLVPDGMGGGFHVD |
Ga0265334_100075564 | 3300028573 | Rhizosphere | LEELSNLPPTAWALIACAAAVGFGISWLWRWYRQYAARKVLRAAVTAAGSDHLVDM |
Ga0302223_101110372 | 3300028781 | Palsa | VNDELSKLTPTAWGLIVAAAAVGFGLSWAWRWYRQYRARKALRAAVTAGTSEHLIDVLV |
Ga0265720_10112251 | 3300030764 | Soil | LSNLPPTAWVLIGGAAAVGFGISWLWRWYRNYSARKVLRAAVTAAGSDHLVDMLVPDGM |
Ga0075379_107387282 | 3300030946 | Soil | LDELSNLPPTAWVLIVTAAAIGFGISWLWRWYRNYSARKALRAAVTAAGSDHLVDQLVPDGMGGGFHVDFLLLTGR |
Ga0075399_110648191 | 3300030967 | Soil | VEELEKLPPTAWALIAAAAVLGFGAAWVWRWYRQYRMRSALRAAVTAAGSDHL |
Ga0170820_140311722 | 3300031446 | Forest Soil | VEELEKLPPTAWGLIAAAAILGFAAAWVWRWYRQYRMRAALRTAVTAAGSDHLVDMLVPDGMGGGFHVEK |
Ga0170820_177446792 | 3300031446 | Forest Soil | VDELTKLTPTAWALIGIAAALGFALSWAIRWYRHYRARKALRAAVTGGTSEHLIDTLVPDGMGAGFH |
Ga0310686_1000536372 | 3300031708 | Soil | LEELSNLPPTAWILIGGAAAVGFGISWLWRWYRNYSARKVLRAAVTAAGSDHLVDM |
Ga0310686_1013123012 | 3300031708 | Soil | MESYRRLVDVDEIEKLPPTAWVLIALAAALGFGVSWLWRWYRQYRARKSLRLAVTATGSDHVIDVLVPDG |
Ga0310686_1028730312 | 3300031708 | Soil | LDELSKLTPTAWAMIVGAAALGFGVSWAWRWYRQYRARKALRTAVTSGAMEHLIDTLVPDGMGGGYHVD |
Ga0307469_114282602 | 3300031720 | Hardwood Forest Soil | VEELEKLPPTAWALIAAAAVLGFAAAWVWRWYRQYRMRSALRAAVTAVGSDHLVDTLVPDGMGGGFHVDF |
Ga0307468_1000688191 | 3300031740 | Hardwood Forest Soil | VDELAKLPPTAWALIAGAAVVGFGLSWAWRWYRHYRARKALRAAVTGGASDHMADSLVPDGMGGGYHV |
Ga0307468_1020957651 | 3300031740 | Hardwood Forest Soil | VDELQKLTPTAWALIAAAAALGFGVAMGWRWYRHYRARKALRAAVTSGASDHLIDVLVPDGMGG |
Ga0307473_115616421 | 3300031820 | Hardwood Forest Soil | VEELEKLSPTAWALIAAAAILGFAAAWVGRWYRQYRMRAALRTAVTAAGSDHLVD |
Ga0302322_1012651632 | 3300031902 | Fen | VEELEKLPPTAWALIAAAAILGFGAAWVWRWYRQYRMRAALRTAVTAAGSDHL |
Ga0307479_100115129 | 3300031962 | Hardwood Forest Soil | VEELEKLPPTAWGLIAAAALLGFAAAWVWRWYRQYRMRAALRTAVTAAGSDHLVDMLVPD |
Ga0348332_119495111 | 3300032515 | Plant Litter | LEELSNLSPTAWVLIVAAAAIGFAISWLWRWYRNYSARKVLRAAV |
Ga0335081_110571461 | 3300032892 | Soil | VDELKNLPPTAWVLIAAAAVLGFAGSWLWRWYRHYRIRAALRAAVTAAGSDHLVDMLVPDGMG |
Ga0335075_107089201 | 3300032896 | Soil | VDEIEKLPPTAWVLIAIAAALGFGISWLWRWYRQYSARKSLRMAVTATGSDHAVDVLVPD |
Ga0335075_115509281 | 3300032896 | Soil | VDEIEKLPPTAWVLIAAAAALGFGVSWLWRWYRQYRTRKSLRMAVTATGSDHVVDVLVPD |
Ga0335083_113734201 | 3300032954 | Soil | LEELSRLPPSAWGMIAGAAALGFAISWLWRWYRNYSARKVLRAAVTA |
Ga0335084_112957322 | 3300033004 | Soil | MDELAKLTPTAWAMIAGAAALGFALSWAWRWYRQYRARKALRAAVTGGAVEFLADMLVPDGMGGGFHVDY |
Ga0307507_104314152 | 3300033179 | Ectomycorrhiza | VEELEKLPPTAWALIAAAAVLGFTAAWVWRWYRQYRMRSALRAAVTAVGSDHLVDTLVPDGMGGGFHVDFLLLTT |
Ga0310811_104012571 | 3300033475 | Soil | LEELSNLPPTAWAMIIGAAVLGFAISWLWRWYRQYAARKVLRAAVTAAGSDHLVDMLVPDGMGGGFHV |
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