Metagenome / Metatranscriptome Family F087439

Overview

Basic Information

• Family ID: F087439
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 110
• Average Sequence Length: 42 residues
• Representative Sequence: HLTKVLPAVPVPPPNVQVRNAPNQAAVEQTLNNLGLTSLLR
• Number of Associated Samples: 74
• Number of Associated Scaffolds: 110

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 0.00 %
• % of genes near scaffold ends (potentially truncated): 27.27 %
• % of genes from short scaffolds (< 2000 bps): 28.18 %
• Associated GOLD sequencing projects: 67
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (97.273 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (79.091 % of family members)
• Environment Ontology (ENVO): Unclassified (49.091 % of family members)
• Earth Microbiome Project Ontology (EMPO): Unclassified (86.364 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Fibrous
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 14.49%
  β-sheet: 0.00%
  Coil/Unstructured: 85.51%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.27 %
All Organisms	root	All Organisms	2.73 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.27 %
cellular organisms	root	All Organisms → cellular organisms	2.73 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.27 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	2.73 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.27 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	2.73 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.27 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	2.73 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.27 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	2.73 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.27 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	2.73 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.27 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	2.73 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.27 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	2.73 %

Level 10

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.27 %
Panarthropoda	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda	2.73 %

Level 11

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.27 %
Arthropoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda	2.73 %

Level 12

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.27 %
Chelicerata	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata	2.73 %

Level 13

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.27 %
Arachnida	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida	2.73 %

Level 14

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.27 %
Acari	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari	2.73 %

Level 15

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.27 %
Acariformes	superorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Acariformes	2.73 %

Level 16

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.27 %
Trombidiformes	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Acariformes → Trombidiformes	2.73 %

Level 17

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.27 %
Prostigmata	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Acariformes → Trombidiformes → Prostigmata	2.73 %

Level 18

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.27 %
Eupodina	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Acariformes → Trombidiformes → Prostigmata → Eupodina	2.73 %

Level 19

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.27 %
Bdelloidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Acariformes → Trombidiformes → Prostigmata → Eupodina → Bdelloidea	2.73 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300011120|Ga0150983_11289843	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Acariformes → Trombidiformes → Prostigmata → Eupodina → Bdelloidea	866
3300011120|Ga0150983_14763213	Not Available	670
3300012212|Ga0150985_122028668	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Acariformes → Trombidiformes → Prostigmata → Eupodina → Bdelloidea	1176
3300027860|Ga0209611_10464108	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Acariformes → Trombidiformes → Prostigmata → Eupodina → Bdelloidea	716
3300030531|Ga0210274_1087491	Not Available	571
3300030570|Ga0247647_1271088	Not Available	509
3300030577|Ga0210260_10297927	Not Available	570
3300030589|Ga0210255_10250489	Not Available	514
3300030593|Ga0210263_1192240	Not Available	527
3300030604|Ga0247637_1157061	Not Available	563
3300030622|Ga0265391_10280801	Not Available	545
3300030625|Ga0210259_10570850	Not Available	562
3300030738|Ga0265462_11575065	Not Available	616
3300030738|Ga0265462_12103666	Not Available	552
3300030738|Ga0265462_12420898	Not Available	522
3300030741|Ga0265459_12806040	Not Available	606
3300030743|Ga0265461_13340923	Not Available	542
3300030748|Ga0074043_10108275	Not Available	589
3300030748|Ga0074043_11293159	Not Available	556
3300030867|Ga0102749_1474150	Not Available	565
3300030935|Ga0075401_11700306	Not Available	556
3300030937|Ga0138302_1508744	Not Available	629
3300030949|Ga0074031_1806556	Not Available	603
3300030979|Ga0068589_10022900	Not Available	531
3300030996|Ga0074004_11449230	Not Available	538
3300031122|Ga0170822_12596399	Not Available	518
3300031122|Ga0170822_16550596	Not Available	545
3300031231|Ga0170824_112679951	Not Available	506
3300031469|Ga0170819_10284695	Not Available	597
3300031474|Ga0170818_114768553	Not Available	574
3300032756|Ga0315742_12279543	Not Available	612

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.82%
Host-Associated	Host-Associated	5.45%
Engineered	Engineered	2.73%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.82%
Plants	Host-Associated → Plants	4.55%
Bioremediation	Engineered → Bioremediation	1.82%
Human	Host-Associated → Human	0.91%
Wastewater	Engineered → Wastewater	0.91%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.91%
Peat Moss	Host-Associated → Plants → Peat Moss	2.73%
Hydrocarbon	Engineered → Bioremediation → Hydrocarbon	1.82%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.91%
Digestive System	Host-Associated → Human → Digestive System	0.91%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.91%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.91%
Nutrient Removal	Engineered → Wastewater → Nutrient Removal	0.91%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.18%
Loam	Environmental → Terrestrial → Soil → Loam	2.73%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	2.73%
Unclassified	Engineered → Bioremediation → Hydrocarbon → Unclassified	1.82%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.91%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	0.91%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified	0.91%

Subtype

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	87.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.73%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	2.73%
Unclassified	Engineered → Bioremediation → Hydrocarbon → Unclassified → Unclassified	1.82%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.91%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.91%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	0.91%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified	0.91%

Habitat

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	79.09%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	8.18%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.73%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	2.73%
Wastewater Bioreactor	Engineered → Bioremediation → Hydrocarbon → Unclassified → Unclassified → Wastewater Bioreactor	1.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.91%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.91%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.91%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.91%
Switchgrass Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere	0.91%
Wastewater Effluent	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified → Wastewater Effluent	0.91%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300003407	Wastewater bioreactor microbial communities from Cape Town, South Africa - Thiocy_cont_750_plan	Engineered
3300006185	Wastewater bioreactor microbial communities from Cape Town, South Africa - Thiocy_cont_1000_biof - 1398105538229 (version 2)	Engineered
3300007250	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 6/11/14 B RNA (Eukaryote Community Metatranscriptome)	Engineered
3300009411	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_OS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental
3300009787	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MG	Host-Associated
3300010199	Peat moss associated microbial communities from Sphagnum species from Minnesota, USA - S1T2_Fd - Sphagnum fallax MT (Eukaryote Community Metatranscriptome)	Host-Associated
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental
3300012212	Combined assembly of Hopland grassland soil	Host-Associated
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental
3300027860	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes)	Host-Associated
3300030528	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO135-VCO084SO (Eukaryote Community Metatranscriptome)	Environmental
3300030529	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO740-VDE013SO (Eukaryote Community Metatranscriptome)	Environmental
3300030531	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO143-VCO038SO (Eukaryote Community Metatranscriptome)	Environmental
3300030532	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO410-VDE108SO (Eukaryote Community Metatranscriptome)	Environmental
3300030535	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO749-VDE026SO (Eukaryote Community Metatranscriptome)	Environmental
3300030542	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO132-ANR003SO (Eukaryote Community Metatranscriptome)	Environmental
3300030545	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO142-VCO033SO (Eukaryote Community Metatranscriptome)	Environmental
3300030550	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bb8 (Eukaryote Community Metatranscriptome)	Environmental
3300030568	Metatranscriptome of decayed wood fungal communities from Pinus contorta in Tenderfoot Creek Experimental Forest, Montana, United States - TCEF3-1 (Eukaryote Community Metatranscriptome)	Host-Associated
3300030570	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cnb12 (Eukaryote Community Metatranscriptome)	Environmental
3300030575	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO747-VDE050SO (Eukaryote Community Metatranscriptome)	Environmental
3300030577	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO131-ARE010SO (Eukaryote Community Metatranscriptome)	Environmental
3300030578	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO105-VCO054SO (Eukaryote Community Metatranscriptome)	Environmental
3300030581	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO142-VCO031SO (Eukaryote Community Metatranscriptome)	Environmental
3300030588	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO740-VDE011SO (Eukaryote Community Metatranscriptome)	Environmental
3300030589	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO133-ANR019SO (Eukaryote Community Metatranscriptome)	Environmental
3300030592	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Ab1 (Eukaryote Community Metatranscriptome)	Environmental
3300030593	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO145-ARE024SO (Eukaryote Community Metatranscriptome)	Environmental
3300030594	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO141-VCO089SO (Eukaryote Community Metatranscriptome)	Environmental
3300030596	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO135-VCO085SO (Eukaryote Community Metatranscriptome)	Environmental
3300030597	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO747-VDE046SO (Eukaryote Community Metatranscriptome)	Environmental
3300030604	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cb2 (Eukaryote Community Metatranscriptome)	Environmental
3300030607	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Anb4 (Eukaryote Community Metatranscriptome)	Environmental
3300030622	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE044SO (Eukaryote Community Metatranscriptome) (v2)	Environmental
3300030625	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO122-ANR120SO (Eukaryote Community Metatranscriptome)	Environmental
3300030630	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO151-VCO115SO (Eukaryote Community Metatranscriptome)	Environmental
3300030631	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO141-VCO086SO (Eukaryote Community Metatranscriptome)	Environmental
3300030738	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly	Environmental
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental
3300030748	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Litter C3 (Eukaryote Community Metatranscriptome)	Environmental
3300030757	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PO 4A (Eukaryote Community Metatranscriptome)	Environmental
3300030779	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB1 EcM (Eukaryote Community Metatranscriptome)	Environmental
3300030789	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PO 3B (Eukaryote Community Metatranscriptome)	Environmental
3300030800	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Mineral N1 (Eukaryote Community Metatranscriptome)	Environmental
3300030839	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil TCEFB (Eukaryote Community Metatranscriptome)	Environmental
3300030848	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 EcM (Eukaryote Community Metatranscriptome)	Environmental
3300030866	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines Pi 1A (Eukaryote Community Metatranscriptome)	Environmental
3300030867	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 2C (Eukaryote Community Metatranscriptome)	Environmental
3300030922	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A9_OS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental
3300030932	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Litter GP-1B (Eukaryote Community Metatranscriptome)	Environmental
3300030933	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Litter N2 (Eukaryote Community Metatranscriptome)	Environmental
3300030935	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA7 SO (Eukaryote Community Metatranscriptome)	Environmental
3300030937	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A4_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental
3300030946	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA7 EcM (Eukaryote Community Metatranscriptome)	Environmental
3300030949	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Humus C3 (Eukaryote Community Metatranscriptome)	Environmental
3300030971	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 SO (Eukaryote Community Metatranscriptome)	Environmental
3300030979	Forest soil microbial communities from France, for metatranscriptomics studies - Site 11 - Champenoux / Amance forest (Eukaryote Community Metatranscriptome)	Environmental
3300030980	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Humus N2 (Eukaryote Community Metatranscriptome)	Environmental
3300030992	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Litter N3 (Eukaryote Community Metatranscriptome)	Environmental
3300030996	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Litter GP-3B (Eukaryote Community Metatranscriptome)	Environmental
3300030998	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3A (Eukaryote Community Metatranscriptome)	Environmental
3300031008	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Litter N1 (Eukaryote Community Metatranscriptome)	Environmental
3300031023	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil TCEFA (Eukaryote Community Metatranscriptome)	Environmental
3300031034	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Litter C1 (Eukaryote Community Metatranscriptome)	Environmental
3300031035	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Humus N1 (Eukaryote Community Metatranscriptome)	Environmental
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031136	Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P3 T16 (Metagenome Metatranscriptome)	Environmental
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300032756	Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined Assembly	Environmental
3300033523	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_18SEP2017_LR1 (Metagenome Metatranscriptome)	Host-Associated

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26536J50258_10737092	3300003407	Wastewater Bioreactor	TKVLPPIPVPPPNVQVRNAPNQAAVEKTLNDLGLTSLIR*
Ga0097682_10267071	3300006185	Wastewater Bioreactor	KVLPPIPVPPPNVQVRNAPNQAAVEKTLNDLGLTSLIR*
Ga0075165_18630111	3300007250	Wastewater Effluent	HFTRMLPAMPVPPPNVQVRNAPNQETVEQTLNKLGLSSLIR*
Ga0115017_10341451	3300009411	Soil	AIPTPPPNVQVRNAPDYATLERTLNDLGLTASMFQ*
Ga0115017_11166513	3300009411	Soil	MLPAQPVPPPVVQVRGAPNQAAVEKTLNGLGLTSL*
Ga0115017_11230731	3300009411	Soil	PQHVPTTHLTKLLPAIPVPPPNVQVRNAPDHATVQRTLQNLGLTSQ*
Ga0115017_13820541	3300009411	Soil	QVPAPPPHVQVRNAPDQATVERTLNNLGLTSHYRN*
Ga0116226_102507641	3300009787	Host-Associated	MLAAMPVPPPNVQVRNAPDAATLERTLNGLGLTSVLQ*
Ga0127508_12896081	3300010199	Host-Associated	IPTTHVTKMLAAMPVPPPNVQVRNAPDAATLERTLNGLGLTSVLQ*
Ga0150983_107292131	3300011120	Forest Soil	IPTTHLTKLLPAVPVPPPNVQVRNAPDQAMVEKTLNDLGLTSLLL*
Ga0150983_112898431	3300011120	Forest Soil	TKMLPPIPVPPPNVHVRGAPSHDAVERTLNGLGLTSRIN*
Ga0150983_147632131	3300011120	Forest Soil	PRPKQIPTTYLTKVLPAVPVPPPNVQVRNAPDQAMVEKTLNELGLTSLLQ*
Ga0150985_1220286681	3300012212	Avena Fatua Rhizosphere	LPAVPVPPPNVQIRNAPDQATVEKTLNELGLTALLR*
Ga0206352_108028001	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	LTRVLPAVPVPPPNVQVRGAAPDQAAVERALNGLGLTSRAQ
Ga0209611_104641081	3300027860	Host-Associated	LTKVLPPLPVPPPHIQVRNAPDQATVERTLKDLGLT
Ga0210277_103651821	3300030528	Soil	PLPRHVPTTYLSRMLPAVPVPPPNVQVRGNPDQATVEQTLNSLCLSATL
Ga0210277_110689481	3300030528	Soil	TTHLTKMLPAAPIPPPNVQIRNAPDQATVEKTLNELGLTSLLK
Ga0210284_17118741	3300030529	Soil	LTKVLPPVPAPPPNVQVRNAPDQATLERTLHSLGLRSQ
Ga0210274_10874911	3300030531	Soil	PRPKHIPTTLLTKVLPAIPVPPPNVQIRNAPDQATVERTLNNLGLTSK
Ga0210290_12803141	3300030532	Soil	PAVPVPPPNVQVRNAPDQAMVEKTLNDLGLTSLLL
Ga0210285_11880771	3300030535	Soil	KVLPAVPVPPPNVQVRNAPDQAMVEKTLNELGLTSLLQ
Ga0210249_12579141	3300030542	Soil	LLTKVLPPVPAPPPNVQIRNAPDQATVERTLNNLGLTSKLNK
Ga0210271_105162761	3300030545	Soil	LTKMLPAAPIPPPNVQIRNAPDQATVEKTLNELGLTSLLK
Ga0247631_10841881	3300030550	Soil	TTHLTKVLPAVPVPPPNVQVRNAPDQATVEKTLNDLGLSSLLK
Ga0257206_11107261	3300030568	Host-Associated	LAAMPVPPPNVQVRNAPDAATLERTLNGLGLTSLLQ
Ga0247647_12710881	3300030570	Soil	PPRPKHIPTTRLTKLLPAVPVPPPNVQIRNAPDQATLEKTLNELGLTSLLLQ
Ga0210288_11643461	3300030575	Soil	PTTVVTRLLPPIPAPPPNVQVRNAPHRATVERTLNNLGLTSH
Ga0210260_102979271	3300030577	Soil	QIPTTVVTKLLPPIPAPPPNVTVRNAPDRATVERTLNNLGLTSH
Ga0210275_101715721	3300030578	Soil	MLTKVLPPVPAPPPNVQVRNAPDQATVERTLKELGLSSFIS
Ga0210275_103408741	3300030578	Soil	TKVLPATPMPPPNVQVRNAPDQVTLERTLNGLGLTSLLQ
Ga0210270_14506601	3300030581	Soil	TTHLTKVLPAVPVPPPNVQVRNAPSQAAVEQTLNKLGLSSLVR
Ga0210283_13837111	3300030588	Soil	KVLPPVPAPPPNVQIRNAPDQATVERTLNNLGLTSKLNK
Ga0210255_102504891	3300030589	Soil	RPQQIPTTHLTKMLPAIPVPPPNIQVRNAPDRATLERTLNGMGLTSMLQ
Ga0210255_111254591	3300030589	Soil	RPMAIPTTHLTKILPAQPIPPPNVQIRNAPDQATVEKTLNELGLTSLLK
Ga0210255_111879241	3300030589	Soil	KVLPPVPAPPPHVQVRNAPDQATVERTLNNLGLTSKLNK
Ga0247612_11360961	3300030592	Soil	RLTKVLPAVPVPPPNVQVRNAPDQATVEKTLNELGLSSLLR
Ga0210263_11922401	3300030593	Soil	PKHVPTTHLTKVLPRIPAPPPNIQVRNAPNHAAVEYTLNNMGLTSKFQ
Ga0210280_11722841	3300030594	Soil	HLTKLLPAIPTPPPNVQVRNAPDRATLEKTLNDLGLTSMLQ
Ga0210278_10042951	3300030596	Soil	HLTKVLAAVPVPPPNVQVRNAPNQAAVEKTLNELGLTSLLR
Ga0210286_12296441	3300030597	Soil	HYTKVLAAVPAPPPNVQVRNAPDQATVEKTLNELGLSSLLK
Ga0247637_11570611	3300030604	Soil	RPQHIPTTHLTKVLPALPVPPPNVQVRNAPDQATLEKTLNDLGLTSLLLR
Ga0247615_103277331	3300030607	Soil	PAMPVPPPNVQVRNAPNQAAVERTLKELGLSSFLR
Ga0265391_102808011	3300030622	Soil	PKQIPPTLLTKVLPAVPVPPPNVQVRNAPDQVTLERTLNGLGLTSLLQ
Ga0210259_105708501	3300030625	Soil	RHIPTTHLTKVLPAMPAPPPHVQVRNAPNQAAVEKTLNDLGLTSLLQ
Ga0210259_112787101	3300030625	Soil	RRPKAIPTTHLTKMLPAAPIPPPNVQIRNAPDQATVEKTLNELGLTSLLK
Ga0210282_102823061	3300030630	Soil	TMLTKMLPATPMPPPNVQVRNAPNQQTVEQTLKGLGLTSQFN
Ga0210282_103070521	3300030630	Soil	LTKFLPAVPMPPPNVQVRNAPNQATVEKTLNDLGLSALLQ
Ga0210282_104041011	3300030630	Soil	PTLLTKVLPQVPAPPPNVQVRNAPDQATVERTLQNLGFK
Ga0210279_103797721	3300030631	Soil	PVQPVPPPNVQIRNAPDQATVERTLNELGLTSLLH
Ga0265462_110963492	3300030738	Soil	MLPAIPAPPPNIQVRNAPDRATLERTLNGMGLTSMLQ
Ga0265462_113079951	3300030738	Soil	IPTTHLTKVLPAMPVPPPNVQVRNAPNQATVEQTLNDLGLTSLLR
Ga0265462_115750651	3300030738	Soil	TTHLTRMLPAVPAPPPNVQVRGAPSQYAVEQTLNNLGLTSRY
Ga0265462_120437861	3300030738	Soil	HYTKVLAAVPAPPPNVQVRNAPDQATVEKTLTELGLSSLLK
Ga0265462_121036661	3300030738	Soil	TTHLTRMLPAVPAPPPNVQVRGAPSQYAVEQTLNNLGLTSKRY
Ga0265462_121469491	3300030738	Soil	HLTKLLPAMPVPPPNVQVRNAPDQATVEQTLNDLGLTALLR
Ga0265462_122105811	3300030738	Soil	TTHLTKLLPAMPVPPPNVQVRNAPNQATLEQTLNDLGLTSLLR
Ga0265462_122330931	3300030738	Soil	PVPMPPPHVQVRNAPDQATVERTLNNLGLTSHYRN
Ga0265462_123884531	3300030738	Soil	PTTRLTKFLPAVPMPPPNVQVRNAPNQATVEQTLNDLGLTSLLQ
Ga0265462_124208981	3300030738	Soil	RPKQIPTTYLTKVLPAVPVPPPNVQVRGAPNQYAVEQTLNNLGLTSRY
Ga0265460_122186631	3300030740	Soil	PAQPVPPPNVQIRNAPDQATVERTLNELGLTSLLH
Ga0265459_128060401	3300030741	Soil	PPRPQQIPTTVVTKLLPPIRAPPPNVQVRNAPDRATVERTLNNLGLTSQ
Ga0265461_128254301	3300030743	Soil	TTLLTKVLPPIPVPPPNIQVRNAPDRATVERTLNSLGLTSQ
Ga0265461_133409231	3300030743	Soil	PKHVPTTHVTKVLPRIPVPPPNVHVRNAPNQAAVEYTLNNMGLTSKFQ
Ga0074043_100036161	3300030748	Soil	KVLPAVPAPPPNVQVRNAPNQAAVEQTLNNMGLTSRLNY
Ga0074043_101082751	3300030748	Soil	PRPKHVPTTLLTKMLPAVPVPPPNVQVRNAPNHQTLEQTLNNLGLTSL
Ga0074043_105856931	3300030748	Soil	PTTMLTRMLPAVPMPPPNVQIRNAPNQQTVEQTLNKLGLTSR
Ga0074043_112931592	3300030748	Soil	PQQIPTTHLTKVLPAIPVPPPNVHIRNAPNQAAVERTLNNLGLTSY
Ga0074043_115244491	3300030748	Soil	TKVLPAVPVPPPNVQVRNAPNRATVERTLNNMGLTSHYNQ
Ga0102768_16183751	3300030757	Soil	TTHLTKVLPAMPTPPPNVQVRNAPDYATLERTLNGLGLTASMFQ
Ga0075378_100951472	3300030779	Soil	PTTHLTKVLPAMPAPPPHVQVRNAPSQAAVEKTLNDLGLTSLLQ
Ga0075378_110465441	3300030779	Soil	KVLPPVPLPPPNVQVRNAPDQATVERTLHSLGLRSQ
Ga0102766_100046941	3300030789	Soil	HIPTTHLTKVLPPVPVPPPNVQVRNAPDHATVEQTLKNLGLTSMMR
Ga0102766_100741741	3300030789	Soil	TSCACSTKVLPAVPVPPPNVQVRNAPDRATVEKTLNDLGLSALLQ
Ga0074032_101167601	3300030800	Soil	TTHLTKMLPAIPVPPPNVQVRNAPDRATLERTLNGMGLTSLLQ
Ga0073999_100116261	3300030839	Soil	VPTTMLTKVLPAVPVPPPNVQVRNAPDHATVQRTLQNLGLTSQ
Ga0075388_116472941	3300030848	Soil	IPTTHLTKVLPAVPVPPPNVLVRGAAPDQATFERTLNGLGLTAKFE
Ga0102744_10663111	3300030866	Soil	TKVLPAVPVPPPNVQVRNAPSQAAVEQTLNNLGLTSLLR
Ga0102749_14741502	3300030867	Soil	HIPTTHLTKVLPAVPIPPPNVQVRNAPSQAAVEQTLNNLGLTSLVR
Ga0138300_13912371	3300030922	Soil	LLPAVPVPPPRVQVRNAPNQATVEQTLNELGLSSLLR
Ga0074001_100246981	3300030932	Soil	THLTKVLPAVPVPPPNVQIRNAPDQAMVEKTLNDLGLTSLLR
Ga0074039_113574871	3300030933	Soil	LTKVLPPVPAPPPNVQVRNAPNQAAVERTLNNLGLTSHYHN
Ga0075401_117003061	3300030935	Soil	PQQIPTTRLTRVLPAIPVPPPNVQIRNAPNQAAVERTLNGLGLTSY
Ga0075401_118267651	3300030935	Soil	PLPRHVPTTHFTRMLPAMPVPPPNVQVRGNPDHATVEQTLNSLGLSATL
Ga0138302_10697561	3300030937	Soil	TKLLPAVPVPPPNVQVRNAPDQAMVEKTLNDLGLTSLLL
Ga0138302_15087441	3300030937	Soil	PTTHLTKMLPAMPMPPPNVQVRNAPNRQTLEQTLNNLGLTAN
Ga0075379_100491642	3300030946	Soil	HLTKVLPAVPVPPPNVQVRNAPNQAAVEQTLNNLGLTSLLR
Ga0074031_18065561	3300030949	Soil	PRPKHVPTTHLTKMLPAMPMPPPNVQVRNAPNRQTLEQTLNNLGLTAN
Ga0075375_115167223	3300030971	Soil	CVNVPAPPPNVQVRNAPDQATVERTLKELGLSSFIS
Ga0068589_100229001	3300030979	Soil	HIPTTHLTKVLPAVPAPPPNVQVRNAPSQAAVEQTLNNLGLTSLVR
Ga0074027_100322401	3300030980	Soil	PQKVPTTLLTKVLPAVPMPPPNVQIRNAPDQATVERTLNNLGLTSR
Ga0074027_114031631	3300030980	Soil	PTTHLTKVLPAVPVPPPNVQVRGAPDRATVEKTLNGLGLTASRR
Ga0074040_112337791	3300030992	Soil	PAVPVPPPNVQVRNAPDQETVEQTLNKLGLSALLQ
Ga0074040_113345761	3300030992	Soil	PLPRHVPTTYLSRMLPAVPVPPPNVQVRGNPDQATVEQTLNSLGLSATL
Ga0074004_114492301	3300030996	Soil	PRPKHVPTTHLTKVLPRTPAPPPNVHVRNAPNQAAVEYTLNNMGLTSRFQ
Ga0073996_122041481	3300030998	Soil	HLTKVLPAVPAPPPYVQIRNAPDQATVERTLNNLGLTSR
Ga0074038_113187381	3300031008	Soil	PTTLLTKVLPPVPMPPPHVQVRNAPDQATVERTLKDLGLQSFISRYST
Ga0073998_114219871	3300031023	Soil	PKHVPTTMLTRMLPAVPMPPPNVQIRNAPNQQTVEQTLNKLGLTSR
Ga0074041_112479441	3300031034	Soil	AVPAPPPNVQVRNAPNQAAVEQTLNNMGLTSRLNY
Ga0074026_111596681	3300031035	Soil	LTKVLPPVPAPPPNVQVRNAPDQATVERTLHSLGLRSH
Ga0170822_125963991	3300031122	Forest Soil	PRPQHVPTTMLTKVLPPVPLPPPNVQVRNAPDQATVERTLHSLGLRSQ
Ga0170822_165505961	3300031122	Forest Soil	PRHIPTTYLTKMLPAVPAPPPNVQVRGAPSQYAVEQTLNNLGLTSKRY
Ga0315837_10386031	3300031136	Plant Litter	THLTKVLPAIPVPPPNVQVRNAPNQATVEQTLNDLGLTALLR
Ga0170824_1004828712	3300031231	Forest Soil	MLPAIPAPPPNVQVRNAPDRATLERTLNGMGLTSMLQ
Ga0170824_1126799511	3300031231	Forest Soil	PRPKHVPTTLLTKVLPPVPAPPPHVQVRNAPDQATVERTLNNLGLTTHYRN
Ga0170819_102846951	3300031469	Forest Soil	EAPPQRPRHIPTTHLTKVLPAVPVPPPNVQVRNAPSQAAVEQTLNKLGLSSLVR
Ga0170818_1147685531	3300031474	Forest Soil	PQHVPTTFLTKVLPPVPAPPPNVQIRNAPDRATVERTLQSLGLLRQ
Ga0315742_122795431	3300032756	Forest Soil	HIPTTMLTKVLPPVPAPPPNVQVRNAPNQAAVERTLNNLGLTSHYHN
Ga0315742_123317661	3300032756	Forest Soil	PTTHLTKVLPAMPVPPPNVQVRNAPNQATVEQTLHQLGLSSFLQ
Ga0315742_128318631	3300032756	Forest Soil	PAVPVPPPNVQVRNAPNQATVEKTLNELGLSSLLK
Ga0314768_12877691	3300033523	Switchgrass Phyllosphere	VLPAIPVPPPNVQVRNAPDAATLEKTLNGLGLTSLMQ