Metagenome / Metatranscriptome Family F087392

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087392
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	76 residues
Representative Sequence	MAKLFKVLANVTACILFLGGVMGMISRMYVWFAVTGFTGTGTDMAQLALQFVYIAIWFVAAVIVMKLSQMLK
Number of Associated Samples	63
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	62.73 %
% of genes near scaffold ends (potentially truncated)	27.27 %
% of genes from short scaffolds (< 2000 bps)	90.00 %
Associated GOLD sequencing projects	58
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (72.727 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment (39.091 % of family members)
Environment Ontology (ENVO)	Unclassified (50.909 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (56.364 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 88.89% β-sheet: 0.00% Coil/Unstructured: 11.11%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF00589	Phage_integrase	2.73
PF02768	DNA_pol3_beta_3	1.82
PF13924	Lipocalin_5	1.82
PF00561	Abhydrolase_1	0.91
PF13540	RCC1_2	0.91
PF01527	HTH_Tnp_1	0.91
PF01206	TusA	0.91
PF01266	DAO	0.91
PF05534	HicB	0.91
PF02629	CoA_binding	0.91
PF12675	DUF3795	0.91
PF01695	IstB_IS21	0.91
PF01061	ABC2_membrane	0.91
PF07969	Amidohydro_3	0.91
PF02661	Fic	0.91
PF12800	Fer4_4	0.91
PF00588	SpoU_methylase	0.91
PF08545	ACP_syn_III	0.91
PF15919	HicB_lk_antitox	0.91
PF00155	Aminotran_1_2	0.91
PF05598	DUF772	0.91
PF02737	3HCDH_N	0.91
PF00583	Acetyltransf_1	0.91
PF13847	Methyltransf_31	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0592	DNA polymerase III sliding clamp (beta) subunit, PCNA homolog	Replication, recombination and repair [L]	1.82
COG0219	tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain	Translation, ribosomal structure and biogenesis [J]	0.91
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.91
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	0.91
COG0425	Sulfur carrier protein TusA (tRNA thiolation, molybdenum cofactor biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.91
COG0565	tRNA C32,U32 (ribose-2'-O)-methylase TrmJ or a related methyltransferase	Translation, ribosomal structure and biogenesis [J]	0.91
COG0566	tRNA G18 (ribose-2'-O)-methylase SpoU	Translation, ribosomal structure and biogenesis [J]	0.91
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.91
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.91
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.91
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.91
COG1598	Antitoxin component HicB of the HicAB toxin-antitoxin system	Defense mechanisms [V]	0.91
COG1748	Saccharopine dehydrogenase, NADP-dependent	Amino acid transport and metabolism [E]	0.91
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	0.91
COG4226	Predicted nuclease of the RNAse H fold, HicB family	General function prediction only [R]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
All Organisms	root	All Organisms	27.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
cellular organisms	root	All Organisms → cellular organisms	27.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	27.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	11.82 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	2.73 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	6.36 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	4.55 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	2.73 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	4.55 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	3.64 %
Candidatus Aminicenantes	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes	2.73 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	0.91 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	4.55 %
unclassified Aminicenantes	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes	2.73 %
Dehalococcoidales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales	1.82 %
unclassified Dehalococcoidia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia	1.82 %
Anaerolineales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales	0.91 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
Candidatus Aminicenantes bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium	2.73 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	1.82 %
Dehalococcoidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae	1.82 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	1.82 %
unclassified Anaerolineales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales	0.91 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
Candidatus Aminicenantes bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium	2.73 %
Clostridium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	1.82 %
Dehalococcoides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides	1.82 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	1.82 %
Anaerolineales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium	0.91 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
Candidatus Aminicenantes bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium	2.73 %
Dehalococcoides mccartyi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	1.82 %
Clostridium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	1.82 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	1.82 %
Anaerolineales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium	0.91 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_104704103	Not Available	596	Open in IMG/M
3300001213\|JGIcombinedJ13530_106184641	Not Available	756	Open in IMG/M
3300004151\|Ga0066602_10083797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1331	Open in IMG/M
3300004154\|Ga0066603_10168157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	983	Open in IMG/M
3300004241\|Ga0066604_10058667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	1526	Open in IMG/M
3300004481\|Ga0069718_14571064	Not Available	621	Open in IMG/M
3300006224\|Ga0079037_100302012	Not Available	1485	Open in IMG/M
3300006224\|Ga0079037_100723285	Not Available	973	Open in IMG/M
3300006224\|Ga0079037_102456208	Not Available	520	Open in IMG/M
3300006224\|Ga0079037_102622201	Not Available	502	Open in IMG/M
3300009053\|Ga0105095_10141247	All Organisms → cellular organisms → Bacteria	1312	Open in IMG/M
3300009091\|Ga0102851_11131759	Not Available	858	Open in IMG/M
3300009091\|Ga0102851_12271848	Not Available	618	Open in IMG/M
3300009131\|Ga0115027_10767068	Not Available	732	Open in IMG/M
3300009131\|Ga0115027_11242197	Not Available	598	Open in IMG/M
3300009167\|Ga0113563_11078978	Not Available	928	Open in IMG/M
3300009167\|Ga0113563_12107729	Not Available	675	Open in IMG/M
3300009179\|Ga0115028_10923892	Not Available	693	Open in IMG/M
3300009179\|Ga0115028_11847330	Not Available	527	Open in IMG/M
3300010324\|Ga0129297_10004741	All Organisms → cellular organisms → Bacteria	6843	Open in IMG/M
3300012152\|Ga0137347_1107204	Not Available	503	Open in IMG/M
3300012931\|Ga0153915_10865572	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300012931\|Ga0153915_11039631	Not Available	955	Open in IMG/M
3300012931\|Ga0153915_11855778	Not Available	705	Open in IMG/M
3300012964\|Ga0153916_10295590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	1654	Open in IMG/M
3300012964\|Ga0153916_11481350	Not Available	754	Open in IMG/M
3300018068\|Ga0184636_1129609	Not Available	878	Open in IMG/M
3300018070\|Ga0184631_10183588	Not Available	854	Open in IMG/M
3300019246\|Ga0172287_1280875	Not Available	586	Open in IMG/M
3300022551\|Ga0212089_10003656	All Organisms → cellular organisms → Bacteria	11287	Open in IMG/M
3300025144\|Ga0209725_1243472	Not Available	536	Open in IMG/M
3300027719\|Ga0209467_1052780	All Organisms → cellular organisms → Bacteria	1641	Open in IMG/M
3300027796\|Ga0209373_10015622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	4752	Open in IMG/M
3300027811\|Ga0256868_10117300	Not Available	1176	Open in IMG/M
3300027811\|Ga0256868_10351418	Not Available	601	Open in IMG/M
3300027877\|Ga0209293_10656234	Not Available	555	Open in IMG/M
3300027885\|Ga0209450_10726866	Not Available	720	Open in IMG/M
3300027896\|Ga0209777_10002758	All Organisms → cellular organisms → Bacteria	22606	Open in IMG/M
3300027897\|Ga0209254_10469626	Not Available	916	Open in IMG/M
3300027899\|Ga0209668_10347302	Not Available	962	Open in IMG/M
3300027900\|Ga0209253_10122885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	2117	Open in IMG/M
3300027900\|Ga0209253_10267631	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1338	Open in IMG/M
3300027900\|Ga0209253_10369557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	1096	Open in IMG/M
3300027900\|Ga0209253_10911043	Not Available	616	Open in IMG/M
3300027900\|Ga0209253_10921048	Not Available	611	Open in IMG/M
3300027902\|Ga0209048_10282622	Not Available	1169	Open in IMG/M
3300030613\|Ga0299915_10507963	Not Available	790	Open in IMG/M
3300031707\|Ga0315291_10111142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2936	Open in IMG/M
3300031707\|Ga0315291_10213419	Not Available	1957	Open in IMG/M
3300031707\|Ga0315291_10233336	Not Available	1850	Open in IMG/M
3300031707\|Ga0315291_10329317	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1483	Open in IMG/M
3300031707\|Ga0315291_10386067	All Organisms → cellular organisms → Bacteria	1337	Open in IMG/M
3300031707\|Ga0315291_11264322	Not Available	598	Open in IMG/M
3300031707\|Ga0315291_11560467	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300031746\|Ga0315293_10227600	Not Available	1522	Open in IMG/M
3300031746\|Ga0315293_10570497	Not Available	862	Open in IMG/M
3300031746\|Ga0315293_10959775	Not Available	612	Open in IMG/M
3300031772\|Ga0315288_10295938	All Organisms → cellular organisms → Bacteria	1693	Open in IMG/M
3300031772\|Ga0315288_10399844	Not Available	1392	Open in IMG/M
3300031772\|Ga0315288_10432534	Not Available	1321	Open in IMG/M
3300031772\|Ga0315288_11291714	Not Available	621	Open in IMG/M
3300031834\|Ga0315290_11316618	Not Available	595	Open in IMG/M
3300031885\|Ga0315285_10001573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	23915	Open in IMG/M
3300031885\|Ga0315285_10117528	Not Available	2280	Open in IMG/M
3300031949\|Ga0214473_11166634	Not Available	800	Open in IMG/M
3300031952\|Ga0315294_10623823	Not Available	960	Open in IMG/M
3300031997\|Ga0315278_10776051	Not Available	970	Open in IMG/M
3300031997\|Ga0315278_11845123	Not Available	570	Open in IMG/M
3300031999\|Ga0315274_10442967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium	1490	Open in IMG/M
3300031999\|Ga0315274_10468428	Not Available	1436	Open in IMG/M
3300031999\|Ga0315274_10538405	Not Available	1308	Open in IMG/M
3300031999\|Ga0315274_10688650	Not Available	1108	Open in IMG/M
3300031999\|Ga0315274_11706916	Not Available	584	Open in IMG/M
3300032046\|Ga0315289_10056009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	4885	Open in IMG/M
3300032046\|Ga0315289_10610913	Not Available	1013	Open in IMG/M
3300032053\|Ga0315284_10210506	All Organisms → cellular organisms → Bacteria	2508	Open in IMG/M
3300032053\|Ga0315284_10623194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	1283	Open in IMG/M
3300032070\|Ga0315279_10114888	Not Available	2272	Open in IMG/M
3300032118\|Ga0315277_11621483	Not Available	547	Open in IMG/M
3300032143\|Ga0315292_10432742	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium	1106	Open in IMG/M
3300032143\|Ga0315292_10546981	Not Available	976	Open in IMG/M
3300032156\|Ga0315295_10312283	Not Available	1594	Open in IMG/M
3300032156\|Ga0315295_11362809	Not Available	689	Open in IMG/M
3300032156\|Ga0315295_11490286	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300032163\|Ga0315281_10767449	Not Available	998	Open in IMG/M
3300032173\|Ga0315268_11342827	Not Available	726	Open in IMG/M
3300032177\|Ga0315276_10301139	All Organisms → cellular organisms → Bacteria	1704	Open in IMG/M
3300032177\|Ga0315276_11529400	Not Available	693	Open in IMG/M
3300032401\|Ga0315275_10485526	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium	1384	Open in IMG/M
3300032401\|Ga0315275_10950845	Not Available	946	Open in IMG/M
3300032516\|Ga0315273_11245631	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium	933	Open in IMG/M
3300033413\|Ga0316603_11012355	Not Available	785	Open in IMG/M
3300033416\|Ga0316622_103038919	Not Available	534	Open in IMG/M
3300033480\|Ga0316620_10958269	Not Available	830	Open in IMG/M
3300033480\|Ga0316620_11037880	Not Available	799	Open in IMG/M
3300033480\|Ga0316620_12172836	Not Available	552	Open in IMG/M
3300033481\|Ga0316600_10721881	Not Available	701	Open in IMG/M
3300033485\|Ga0316626_12147112	Not Available	507	Open in IMG/M
3300033486\|Ga0316624_11699011	Not Available	583	Open in IMG/M
3300033487\|Ga0316630_10356167	Not Available	1151	Open in IMG/M
3300033487\|Ga0316630_11362680	Not Available	635	Open in IMG/M
3300033487\|Ga0316630_12071137	Not Available	524	Open in IMG/M
3300033489\|Ga0299912_10992198	Not Available	627	Open in IMG/M
3300033489\|Ga0299912_11228596	Not Available	545	Open in IMG/M
3300033493\|Ga0316631_10057884	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300033513\|Ga0316628_101748850	Not Available	828	Open in IMG/M
3300033513\|Ga0316628_102030538	Not Available	764	Open in IMG/M
3300033513\|Ga0316628_102960345	Not Available	622	Open in IMG/M
3300033521\|Ga0316616_102643945	Not Available	675	Open in IMG/M
3300033557\|Ga0316617_100320854	Not Available	1323	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	79.09%
Terrestrial	Environmental → Terrestrial	20.91%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	74.55%
Soil	Environmental → Terrestrial → Soil	20.91%
Sediment	Environmental → Aquatic → Sediment	2.73%
Marine	Environmental → Aquatic → Marine	1.82%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	41.82%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	15.45%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.82%
Lentic	Environmental → Aquatic → Freshwater → Lentic	9.09%
Sediment	Environmental → Aquatic → Freshwater → Sediment	7.27%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	5.45%
Pond	Environmental → Aquatic → Freshwater → Pond	4.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.73%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.82%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	41.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	15.45%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	11.82%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	9.09%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	7.27%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	4.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.73%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.73%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.73%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.82%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	39.09%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	15.45%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	9.09%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	7.27%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	5.45%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	4.55%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	4.55%
Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Lake Sediment	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.73%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	1.82%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.82%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.91%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.91%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300004151	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 5	Environmental	Open in IMG/M
3300004154	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 8	Environmental	Open in IMG/M
3300004241	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 11	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300010324	Lake sediment bacterial and archeal communities from Gulf of Boni, Indonesia to study Microbial Dark Matter (Phase II) - ?I18A1 metaG	Environmental	Open in IMG/M
3300012152	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT590_2	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300018068	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b2	Environmental	Open in IMG/M
3300018070	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b1	Environmental	Open in IMG/M
3300019246	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_deep_8_15_core_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022551	Boni_combined assembly	Environmental	Open in IMG/M
3300025144	Lake sediment bacterial and archeal communities from Gulf of Boni, Indonesia to study Microbial Dark Matter (Phase II) - ?I18A1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027719	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027796	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 5 (SPAdes)	Environmental	Open in IMG/M
3300027811	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227 HiSeq	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027885	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300030613	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031885	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_36	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031952	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032046	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_40	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032070	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_20	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033489	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214	Environmental	Open in IMG/M
3300033493	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D3_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1047041031	3300001213	Wetland	MAKLFKALANITACILFLGGILGMISRMYVWFAVTGFNGTGTDMAQLALQFMYIAIWFVAAVVVMKLSQMLK*
JGIcombinedJ13530_1061846412	3300001213	Wetland	MAKLFKVLANITACILFLGGIMGIISRMYVWFAVTGFAGTGTDMAQLSLQFVYIAVWFVAAVVVMKLSQMLK*
Ga0066602_100837972	3300004151	Freshwater	MPKTFKALANVTACILFLGGVFGLISRMYVWFAVTGFTGTGADMAQLSLQFVYIAIWLVSAVVVMKLSQMLK*
Ga0066603_101681571	3300004154	Freshwater	NVTACILFLGGVFGLISRMYVWFAVTGFTGTGADMAQLSLQFVYIAIWLVSAVVVMKLSQMLK*
Ga0066604_100586672	3300004241	Freshwater	MPKTFKALANVTACILFLGGGFGLISRMYVWFAVTGFTGTGADMAQLSLQFVYIAIWLVSAVVVMKLSQMLK*
Ga0069718_145710641	3300004481	Sediment	ELIKRERRLKQKKKQTKRNIRINTNIFRRIEMAKLFKVLANVTACILFLGGVMGMISRMYVWFAVTGFFGTGTDMSQLALQFAYIAIWFVAAVVVMKLSQMLK*
Ga0079037_1003020121	3300006224	Freshwater Wetlands	MAKLFKALANITACILFLGGIFGMISRMYVWFAVTGFTGTGTDMAQLALQFAYIAIWFVAAVVVMKLSQMLK*
Ga0079037_1007232851	3300006224	Freshwater Wetlands	MAKIYKVLANVTACFLFLGGFLGMISRMYVWFAVTGFDGTGTDMAQLSLQFVYIAIWFVAAVVVMKLSQMLK*
Ga0079037_1024562081	3300006224	Freshwater Wetlands	MAKLFKVLANVSACILFLGGVMGMISRMYVWFAVTGFFGTGTDMSQLALQFVYIAIWFVAAVVVMKLSQMLK*
Ga0079037_1026222011	3300006224	Freshwater Wetlands	MAKLFKFLANITACILFLGGFLGAISRMYVWFAVTGFTGTGADMAQLALQFVYIAIWFVAAVVVMKLSQMLK*
Ga0105095_101412472	3300009053	Freshwater Sediment	MAKVFKVLANVSACILFLGGIFGVISRMYVWFAVTGFTGTGTDMAQLALQFVYIAIWFVAAVVVMKLSQMLK*
Ga0102851_111317591	3300009091	Freshwater Wetlands	MGPIPNRLQAFDCASVIVYREGEMSKVFKVLANITALFLFAGGLLGMISRMIVWFGTTGFTGTGTEMAYLALQFVYIAAWFVSAVVVMKLCQTLK*
Ga0102851_122718482	3300009091	Freshwater Wetlands	LAIQGDFKKKSTTKTFRRTKMAKLYKVLANITACILFLGGIMGIISRMYVWFAVTGFTGTGTDMAQLALQFVYIAIWFVAAVVVMKLSQMLK*
Ga0115027_107670681	3300009131	Wetland	EMAKLFKVLANVTACILFLGGVMGMISRMYVWFAVTGFFGTGTDMSQLALQFAYIAIWFVAAVVVMKLSQMLK*
Ga0115027_112421971	3300009131	Wetland	MKMAKLFKALANITACILFLGGILGMISRMYVWFAVTGFTGTGTDMAQLALQFAYIAIWFVAAVVVMKLSQMLK*
Ga0113563_110789781	3300009167	Freshwater Wetlands	MSKVFKVLANITALFLFAGGLLGMISRMIVWFGTTGFTGTGTEMAYLALQFVYIAAWFVSAVVVMKLSQTLK*
Ga0113563_121077291	3300009167	Freshwater Wetlands	MKMAKLFKALANITACILFLGGILGMISRMYVWFAVTGFNGTGTDMAQLSLQFVYIAIWFIAAVVVMKLSQMLK*
Ga0115028_109238921	3300009179	Wetland	MNLNDKSNTTIFRRIEMAKLFKVLANVTACILFLGGVVGMISRMYIWFAVTGFFGTGTDMSQLALQFAYIAIWFVAAVVVMKLSQMLK*
Ga0115028_118473301	3300009179	Wetland	MGPIPNRLQTFDLGSAIVYREGEMSKVFKILANITALFLFAGGLLGMISRMIVWFGTTGFTGTGTEMAYLALQFVYIAAWFVSAVVVMKLSQTLK*
Ga0129297_100047413	3300010324	Lake Sediment	MDPNDKSKTTTFRRIEMAKLFKVLANVTACILFLGGVMGIISRMYVWFAVTGFNGTGTDMAQLALQFVYIAIWFVAAVVVMKLSQMLK*
Ga0137347_11072041	3300012152	Soil	MNLNDKSNTTIFRRIEMAKLFKVLANVTACILFLGGVMGMISRMYVWFAVTGFFGTGTDMSQLALQFAYIAIWFVAAVVVMKLSQMLK*
Ga0153915_108655721	3300012931	Freshwater Wetlands	MTKLFKALANITACILFLGGILGIISRMYVWFAVTGFNGTGTDMAQLALQFLYIAIWFVAAVVVMKLSQMLK*
Ga0153915_110396311	3300012931	Freshwater Wetlands	MAKLFKALANLTACILFLGGILGMISRMYVWFAVTGFNGTGTDMAQLALEFLYIAIWFVAAVVVMKLSQMLK*
Ga0153915_118557781	3300012931	Freshwater Wetlands	KMAKLFKALANITACILFLGGILGMISRMYVWFAVTGFTGTGTDMAQLALQFAYIAIWFVAAVVVMKLSQMLK*
Ga0153916_102955901	3300012964	Freshwater Wetlands	MAKLFKALANLTACILFLGGILGMISRMYVWFAVTGFNGTGTDMAQLALEFVYIAIWFVAAVVVMKLSQMLK*
Ga0153916_114813502	3300012964	Freshwater Wetlands	MSRVFRVLATITALFLFIGGCLGMISRMIVWFGTTGFTGTGTDMAQLALQFVYVAIWFVSSVVVMRLTQTLK*
Ga0184636_11296091	3300018068	Groundwater Sediment	MDLNDKSNTNIFRRIEMAKLFKVLANVSACILFLGGVMGMISRMYVWFAVTGFNGTGTDMSQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0184631_101835881	3300018070	Groundwater Sediment	MDLNDKSNTNIFRRIEMAKLFKVLANVTACILFLGGVMGMISRMYVWFAVTGFNGTGTDMSQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0172287_12808751	3300019246	Wetland	MLAIPMDLNDKSKTTTFGRIEMAKLFKVLANVTACILFLGGVMGMISRMYVWFAVTGFFGTGTDMSQLSLQFVYIAIWFVAAVVVMKLSQMLK
Ga0212089_100036569	3300022551	Lake Sediment	MAKLFKVLANVTACILFLGGVMGIISRMYVWFAVTGFNGTGTDMAQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0209725_12434721	3300025144	Lake Sediment	TIFSGRIEMAKLFKVLANVTACILFLGGVMGMISRMYVWFAVTGFNGTGTDMAQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0209467_10527802	3300027719	Freshwater	MPKTFKALANVTACILFLGGGFGLISRMYVWFAVTGFTGTGADMAQLSLQFVYIAIWLVSAVVVMKLSQMLK
Ga0209373_100156224	3300027796	Freshwater	MPKTFKALANVTACILFLGGVFGLISRMYVWFAVTGFTGTGADMAQLSLQFVYIAIWLVSAVVVMKLSQMLK
Ga0256868_101173002	3300027811	Soil	MDLNDKSNTTIFRRIEMAKLFKVLANVSACILFLGGVMGMISRMYVWFAVTGFNGTGTDMSQLALQFAYIAIWFVAAVVVMKLSQMLK
Ga0256868_103514181	3300027811	Soil	MAKVFKVLANVSACILFLGGIFGVISRMYVWFAVTGFTGTGTDMAQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0209293_106562341	3300027877	Wetland	MAKLFKALANITACILFLGGIFGMISRMYVWFAVTGFTGTGTDMAQLALQFAYIAIWFVAAVVVMKLSQMLK
Ga0209450_107268661	3300027885	Freshwater Lake Sediment	MANIFKAMANVTACILFLGGILGLLSRMYVWFAVTGFNGTGADMTQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0209777_100027584	3300027896	Freshwater Lake Sediment	LAKIYKVLANVTACFLFLGGFLGMISRMYVWFAVTGFDGTGTDMAQLSLQFVYIAIWFVAAVVVMKLSQMLK
Ga0209254_104696262	3300027897	Freshwater Lake Sediment	MAKLFKVLANVTACILFLGGVMGMISRMYVWFAVTGFFGTGTDMSQLALQFAYIAIWFVAAVVVMKLSQMLK
Ga0209668_103473022	3300027899	Freshwater Lake Sediment	RINTNIFRRIEMAKLFKVLANVTACILFLGGVMGMISRMYVWFAVTGFNGTGTDMSQLALQFAYIAIWFVAAVVVMKLSQMLK
Ga0209253_101228853	3300027900	Freshwater Lake Sediment	MAKMFKALANVTACILFLGGILGLISRMYVWFAVTGFTGTGTDMAQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0209253_102676312	3300027900	Freshwater Lake Sediment	ACILFLAGVMGMISRMYIWFAVTGFTGTGTDMAQLALQFVYIAIWFVAAVVVMRLSQMLK
Ga0209253_103695572	3300027900	Freshwater Lake Sediment	MAKIFKTLANVTACILFLGGIFGLISRMYVWFAVTGFTGTGADMAQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0209253_109110431	3300027900	Freshwater Lake Sediment	MAKLFKVLANVTACILFLAGVMGMMSRMYVWFAVTGFTGTGTDMAQLALQFMYIAIWFVAAVVVMKLSQMLK
Ga0209253_109210481	3300027900	Freshwater Lake Sediment	MAKLFKALANVTACILFLGGIFGMISRMYVWFAVTGFTGTGTDMAQLALQFAYIAIWFVAAVVVMKLSQMLK
Ga0209048_102826222	3300027902	Freshwater Lake Sediment	MAKVFKVLANVSACILFLGGIIGVISRMYVWFAVTGFTGTGTDMAQLALQFVYIAIWFVAAV
Ga0299915_105079632	3300030613	Soil	NVSACILFLGGVMGMISRMYVWFAVTGFFGTGTDMSQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0315291_101111424	3300031707	Sediment	MAKVFKVLANLSACILFLGGIFGVISRMYVWFAVTGFTGTGTDMAQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0315291_102134193	3300031707	Sediment	MDLNDKSNTTIFRRIEMAKLFKVLANVTACILFLGGVMGMISRMYVWFAVTGFFGTGTDMSQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0315291_102333362	3300031707	Sediment	MDLNDKSKTTTFRRIEMAKLFKVLANVTACILFLAGVMGMMSRMYVWFAVTGFTGTGTDMAQLALQFMYIAIWFVAAVVVMKLSQMLK
Ga0315291_103293172	3300031707	Sediment	MAKLFKALANIAACILFLGGIFGLISRMYVWFAVTGFTGTGTDMAQLALQFVYIAFWFVAAVAVMKLSQMLK
Ga0315291_103860672	3300031707	Sediment	MAKLFKFLANITACILFLGGFLGAISRMYVWFAVTGFTGTGTDMAQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0315291_112643222	3300031707	Sediment	MAKLFKVLANVTACILFLGGVMGMISRMYVWFAVTGFNGTGTDMSQLALQFAYIAIWFVAAVVVMKLSQMLK
Ga0315291_115604671	3300031707	Sediment	DFRRKKMAKIYKVLANVAACFLFLGGFLGMISRMYVWFAVTGFDGTGTDMAQLSLQFVYIAIWFVAAVVVMKLSQMLK
Ga0315293_102276003	3300031746	Sediment	MAKLFKVLANVTACLLFLGGVMGMISRMYVWFTVTGFNGTGTDMAQLALQFVYIAIWFVAAVVVMKLSQMLQ
Ga0315293_105704971	3300031746	Sediment	MAKIYKVLANVAACFLFLGGFLGMISRMYVWFAVTGFDGTGTDMAQLSLQFVYIAIWFVAAVVVMKLSQMLK
Ga0315293_109597752	3300031746	Sediment	MDLNDKSNTNIFRRIEMAKLFKVLANVTACILFLGGVMGMISRMYVWFAVTGFNGTGTDMSQLALQFAYIAIWFVAAVVVMKLSQMLK
Ga0315288_102959382	3300031772	Sediment	MAKVFKVMANVSACILFLGGIFGVISRMYVWFAVTGFTGTGTDMAQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0315288_103998441	3300031772	Sediment	MDLNDKSNTNIFRRIEMAKLFKVLANVTACILFLGGVMGMISRMYVWFAVTGFFGTGTDMSQIALQFVYIAIWFVAAVVVMKLSQMLK
Ga0315288_104325343	3300031772	Sediment	LAIQVDLNDKSKATTFRRIEMAKLFKVLANVTACILFLAGVMGMISRMYIWFAVTGFTGTGTDMAQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0315288_112917141	3300031772	Sediment	MAKIYKVLANVTACFLFLGAFLGMISRMYVWFAVTGFDGTGTDMAQLSLQFVYIAIWFVAAVVVMKLSQMLK
Ga0315290_113166181	3300031834	Sediment	MAKVFKVLANVSACILFLGGIFGVISRMYVWFAVTGFTGTGTDMAQLALQFVYIAIWFVAAVIVMKLSQMLK
Ga0315285_1000157314	3300031885	Sediment	MAKLFKVLANVTACILFLAGVMGMMSRMYVWFAVTGFTGTGTDMAQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0315285_101175284	3300031885	Sediment	MAKLFKVLANVTACILFLGGVMGMISRMYVWFAVTGFFGTDMSQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0214473_111666341	3300031949	Soil	LNDKSNTTIFRRIEMAKLFKVLANVSACILFLGGVMGMISRMYVWFAVTGFFGAGTNMSQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0315294_106238232	3300031952	Sediment	IFRRIEMAKLFKVLANVTACILFLGGVMGMISRMYVWFAVTGFFGTGTDMSQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0315278_107760511	3300031997	Sediment	NITACILFLGGIFGLISRMYVWFAVTGFTGTGTDMAQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0315278_118451231	3300031997	Sediment	MAKLFKVLANVTACILFLGGVMGMISRMYVWFAVTGFNSTGTDMSQLALQFAYIAIWFVAAVVVMKLSQMLK
Ga0315274_104429671	3300031999	Sediment	TFRRSKMAKVFKVLANLSACILFLGGIFGVISRMYVWFAVTGFTGTGTDMAQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0315274_104684281	3300031999	Sediment	MAKLFKVLANVTACILFLAGVMGMISRMYIWFAVTGFTGTGTDMAQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0315274_105384053	3300031999	Sediment	MNLNDKSNTTIFRRIEMAKLFKVLANVTACILFLGGVMGMISRMYVWFAVTGFFGTGTDMSQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0315274_106886502	3300031999	Sediment	IISTKVKCQTRRQEMAKLFKFLANITACILFLGGFLGAISRMYVWFAVTGFTGTGTDMAQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0315274_117069161	3300031999	Sediment	AIKGDFSRKSITTGFRRSKMAKLFKALANVTACILFLGGIFGVISRMYVWFAVTGFTGTGTEMAQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0315289_100560096	3300032046	Sediment	MAKIFKVLANVTACILFLGGILGLISRMYVWFSVTGFTGTGTDMAQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0315289_106109132	3300032046	Sediment	KLFKVFANVTACILFLGGVMGMISRMYVWFAVTGFFGTGTDMSQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0315284_102105063	3300032053	Sediment	VLANVTACILFLGGVMGMISRMYVWFAVTGFTGTGTDMAQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0315284_106231942	3300032053	Sediment	MAKLFKVLANVTACILFLGGVMGMISRMYVWFAVTGFTGTGTDMAQLALQFVYIAIWFVAAVIVMKLSQMLK
Ga0315279_101148882	3300032070	Sediment	MAKLFKALANVTACILFLGGIFGVISRMYVWFAVTGFTGTGTDMAQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0315277_116214832	3300032118	Sediment	MAKIYKVLANVTACFLFLGGFLGMISRMYVWFAVTGFDGTGTDMAQLSLQFVYIAIWFVAAVVVMKLSQMLK
Ga0315292_104327422	3300032143	Sediment	MAKVFKVLANVSACILFLGGIFGMISRMYVWFAVTGFTGTGTDMAQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0315292_105469811	3300032143	Sediment	MDLNDKSNTNIFRRIEMAKLFKVLANVTACILFLGGVMGMISRMYVWFAVTGFFGTGTDMSQLALQFAYIAIWFVAAVVVMKLSQMLK
Ga0315295_103122831	3300032156	Sediment	MAKLFKVLANVTACILFLGGILGVISRMYVWFAVTGFTGTGTDMTQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0315295_113628091	3300032156	Sediment	MAKLFKVLANVSACILFLGGVMGMISRMYVWFAVTGFFGTGTDMSQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0315295_114902861	3300032156	Sediment	MAKVFKVLANVSACILFLGGIFGMISRMYVWFAVTGFTGTGTDMAQLALQFVYIAIWFVAAVIVMKLSQMLK
Ga0315281_107674493	3300032163	Sediment	MDLNDKSNTNIFRRIEMAKLFKVLANVTACILFLGGVMGMISRMYVWFAVTGFFGTDMSQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0315268_113428272	3300032173	Sediment	MPKIFKTLATIIAWLLFVGGCLGFISRGIVWFFVTGFTGTGNDMAQLALQFVYIAIWLIGAVVVMKLRQSMQ
Ga0315276_103011393	3300032177	Sediment	MAKVFKVLANVSACILFLGGIFGVISRMYVWFAVIGFTGTGTDMAQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0315276_115294002	3300032177	Sediment	ITTGFRRSKMAKLFKVLANVTACILFLGGILGVISRMYVWFAVTGFTGTGTDMTQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0315275_104855262	3300032401	Sediment	MAKMFKALANVTACILFLGGILGLISRMYVWFAVTGFTGTGNDMAQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0315275_109508451	3300032401	Sediment	MAKIYKVLANVTACFLFLGGFLGMISRMYVWFAVTGFDGTGTDMAQLSLQFVYIAIWFVAAVVVMKLSQ
Ga0315273_112456311	3300032516	Sediment	MAKVFKVLANVSACILFLGGIFGVISRMYVWFAVTGFTGTGTDMAQLALQFVYIAIWFVAAV
Ga0316603_110123551	3300033413	Soil	MSKVFKVLANITALFLFAGGLLGMISRMIVWFGTTGFTGTGTEMAYLALQFVYIAAWFVSAVVVMKLCQTLK
Ga0316622_1030389191	3300033416	Soil	MPKIFKTLATIIAWILFVGGCLGFISRGIVWFFVTGFTGTGNDMAQLALQFVYIAIWLIGAVVVMKLRQSMQ
Ga0316620_109582692	3300033480	Soil	MSRVFRVLATITALFLFIGGCLGMISRMIVWFGTTGFTGTGTDMAQLALQFVYVAIWFVSSVVVMRLTQTLK
Ga0316620_110378801	3300033480	Soil	MSKVFKVLANITALFLFAGGLLGMISRMIVWFGTTGFTGTGTEMADLALQFVYIAAWFVSAVVVMKLSQTLK
Ga0316620_121728361	3300033480	Soil	MSRIFKVLATVTALFLFIGGFLGMISRMIVWFGTTGFTGTGNEMAQLALQFVYIAIWFVSSVVVMKLTQTLK
Ga0316600_107218811	3300033481	Soil	MAKLFKALANITACILFLGGILGMISRMYVWFAVTGFNGTGTDMAQLSLQFVYIAIWFIAAVVVMKLSQMLK
Ga0316626_121471121	3300033485	Soil	SFDLSSAIVYREGEMSKVFKVLANITALFLFAGGLLGMISRMIVWFGTTGFTGTGTEMAYLALQFVYIAAWFVSAVVVMKLCQTLK
Ga0316624_116990112	3300033486	Soil	MGPIPNRLQTFDRALAIVYREGEMSKVFKVLANITALFLFAGGLLGMISRMIVWFGTTGFTGTGTEMADLALQFVYIAAWFVSAVVVMKLSQTLK
Ga0316630_103561671	3300033487	Soil	MSTLFKVLANVTALFLFVGGCLGMISRMIVWFGTTGFTGTGNDMAQLALQFVYIAVWFVAAVVVMKLSQTLK
Ga0316630_113626801	3300033487	Soil	FDLGSAIVYREGEMSKVFKVLANITALFLFAGGLLGMISRMIVWFGTTGFTGTGTEMAYLALQFVYIAAWFVSAVVVMKLSQTLK
Ga0316630_120711371	3300033487	Soil	MAKLFKALANITACILFLGGIFGMISRMYVWFAVTGFTGNGADMAQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0299912_109921981	3300033489	Soil	LANVSACILFLGGIFGVISRMYVWFAVTGFTGTGTDMAQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0299912_112285961	3300033489	Soil	NLNDKSNTTIFRRIEMAKLFKVLANVTACILFLGGVMGMISRMYVWFAVTGFFGTGTDMSQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0316631_100578843	3300033493	Soil	MAKLFKALANITACILFLGGILGMISRMYVWFAVTGFTGTGTDMAQLALQFAYIAIWFVAAVVVMKLSQMLK
Ga0316628_1017488501	3300033513	Soil	MPKIFKTLATIIAWILFVGGCLGFISRGIVWFFVTGFTGTGNDMAQLAVQFVYIAIWLIGAVVVMKLRQSMQ
Ga0316628_1020305381	3300033513	Soil	MSKVFKVLANITALFLFAGGLLGMISRMIVWFGTTGFTGTGAEMAYLALQFVYIAAWFVSAVVVMKLSQTLK
Ga0316628_1029603451	3300033513	Soil	MAKLFKFLANITACILFLGGFLGAISRMYVWFAVTGFTGTGADMAQLALQFVYIAIWFVAAVVVMRLSQMLK
Ga0316616_1026439451	3300033521	Soil	YDLRYRHLRKLNRNLRTTTFRRTKMSKLFKVLANLTACILFLGGIMGIISRMYVWFAVTGFTGTGTDMAQLALQFVYIAIWFVAAVVVMKLSQMLK
Ga0316617_1003208541	3300033557	Soil	MSKVFKVLANITALFLFAGGLLGMISRMIVWFGTTGFTGTGTEMAYLALQFVYIAAWFVSAVVVMKLSQTLK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087392

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences