NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F087365

Metagenome Family F087365

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F087365
Family Type Metagenome
Number of Sequences 110
Average Sequence Length 71 residues
Representative Sequence VASSRDCVEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDG
Number of Associated Samples 85
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 46.36 %
% of genes near scaffold ends (potentially truncated) 47.27 %
% of genes from short scaffolds (< 2000 bps) 82.73 %
Associated GOLD sequencing projects 74
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (65.455 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere
(15.454 % of family members)
Environment Ontology (ENVO) Unclassified
(60.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(74.545 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 33.33%    β-sheet: 33.33%    Coil/Unstructured: 33.33%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 110 Family Scaffolds
PF00216Bac_DNA_binding 12.73
PF13411MerR_1 11.82
PF00072Response_reg 3.64
PF00589Phage_integrase 3.64
PF02798GST_N 3.64
PF12244DUF3606 3.64
PF13417GST_N_3 1.82
PF07589PEP-CTERM 1.82
PF00903Glyoxalase 1.82
PF12796Ank_2 0.91
PF07238PilZ 0.91
PF00376MerR 0.91
PF09278MerR-DNA-bind 0.91
PF02355SecD_SecF 0.91
PF12681Glyoxalase_2 0.91

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 110 Family Scaffolds
COG0776Bacterial nucleoid DNA-binding protein IHF-alphaReplication, recombination and repair [L] 12.73
COG0341Preprotein translocase subunit SecFIntracellular trafficking, secretion, and vesicular transport [U] 0.91
COG0342Preprotein translocase subunit SecDIntracellular trafficking, secretion, and vesicular transport [U] 0.91
COG0789DNA-binding transcriptional regulator, MerR familyTranscription [K] 0.91


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A65.45 %
All OrganismsrootAll Organisms34.55 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002239|JGI24034J26672_10014089Not Available1217Open in IMG/M
3300005148|Ga0066819_1025101All Organisms → cellular organisms → Bacteria → Proteobacteria520Open in IMG/M
3300005290|Ga0065712_10344981Not Available784Open in IMG/M
3300005294|Ga0065705_10366756Not Available930Open in IMG/M
3300005294|Ga0065705_10603415All Organisms → cellular organisms → Bacteria → Proteobacteria705Open in IMG/M
3300005295|Ga0065707_10017924All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1544Open in IMG/M
3300005328|Ga0070676_10068300All Organisms → cellular organisms → Bacteria → Proteobacteria2127Open in IMG/M
3300005328|Ga0070676_10480796Not Available878Open in IMG/M
3300005331|Ga0070670_100173545Not Available1870Open in IMG/M
3300005331|Ga0070670_100186419Not Available1801Open in IMG/M
3300005331|Ga0070670_100536751Not Available1043Open in IMG/M
3300005331|Ga0070670_101502240Not Available618Open in IMG/M
3300005331|Ga0070670_101655773Not Available588Open in IMG/M
3300005333|Ga0070677_10068717Not Available1484Open in IMG/M
3300005335|Ga0070666_11259430Not Available551Open in IMG/M
3300005340|Ga0070689_101587339Not Available594Open in IMG/M
3300005353|Ga0070669_100451122Not Available1060Open in IMG/M
3300005354|Ga0070675_100597619All Organisms → cellular organisms → Bacteria → Proteobacteria1000Open in IMG/M
3300005354|Ga0070675_101091413Not Available734Open in IMG/M
3300005355|Ga0070671_100115735All Organisms → cellular organisms → Bacteria2254Open in IMG/M
3300005355|Ga0070671_100490248Not Available1056Open in IMG/M
3300005355|Ga0070671_100907836Not Available770Open in IMG/M
3300005438|Ga0070701_10021486All Organisms → cellular organisms → Bacteria → Proteobacteria3081Open in IMG/M
3300005456|Ga0070678_100517833Not Available1055Open in IMG/M
3300005457|Ga0070662_100068081All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium S5133MH162616Open in IMG/M
3300005543|Ga0070672_101915665Not Available533Open in IMG/M
3300005549|Ga0070704_100043152All Organisms → cellular organisms → Bacteria → Proteobacteria3125Open in IMG/M
3300005564|Ga0070664_100805204Not Available879Open in IMG/M
3300005719|Ga0068861_100737070Not Available919Open in IMG/M
3300005840|Ga0068870_11099323Not Available572Open in IMG/M
3300005841|Ga0068863_100919787All Organisms → cellular organisms → Bacteria → Proteobacteria875Open in IMG/M
3300005842|Ga0068858_100312968All Organisms → cellular organisms → Bacteria1499Open in IMG/M
3300005842|Ga0068858_102412848Not Available520Open in IMG/M
3300006237|Ga0097621_100183314All Organisms → cellular organisms → Bacteria1810Open in IMG/M
3300006880|Ga0075429_100827202All Organisms → cellular organisms → Bacteria → Proteobacteria811Open in IMG/M
3300009011|Ga0105251_10130993All Organisms → cellular organisms → Bacteria → Proteobacteria1136Open in IMG/M
3300009094|Ga0111539_10167873All Organisms → cellular organisms → Bacteria → Proteobacteria2565Open in IMG/M
3300009094|Ga0111539_11811597Not Available708Open in IMG/M
3300009098|Ga0105245_10080800All Organisms → cellular organisms → Bacteria → Proteobacteria2970Open in IMG/M
3300009098|Ga0105245_12783413Not Available542Open in IMG/M
3300009148|Ga0105243_10051291All Organisms → cellular organisms → Bacteria → Proteobacteria3263Open in IMG/M
3300009148|Ga0105243_11196806Not Available773Open in IMG/M
3300009148|Ga0105243_12517006Not Available554Open in IMG/M
3300009156|Ga0111538_10219656All Organisms → cellular organisms → Bacteria2409Open in IMG/M
3300009176|Ga0105242_12640870Not Available551Open in IMG/M
3300009177|Ga0105248_10931154Not Available981Open in IMG/M
3300009553|Ga0105249_11381540Not Available776Open in IMG/M
3300010397|Ga0134124_10832138Not Available925Open in IMG/M
3300010397|Ga0134124_13018274Not Available514Open in IMG/M
3300010399|Ga0134127_10113738All Organisms → cellular organisms → Bacteria2397Open in IMG/M
3300011119|Ga0105246_11190727Not Available701Open in IMG/M
3300011398|Ga0137348_1036909Not Available808Open in IMG/M
3300012506|Ga0157324_1053481All Organisms → cellular organisms → Bacteria → Proteobacteria532Open in IMG/M
3300012893|Ga0157284_10003904All Organisms → cellular organisms → Bacteria → Proteobacteria2418Open in IMG/M
3300012893|Ga0157284_10031499Not Available1107Open in IMG/M
3300012904|Ga0157282_10144176Not Available719Open in IMG/M
3300012909|Ga0157290_10049423Not Available1078Open in IMG/M
3300012910|Ga0157308_10084566Not Available904Open in IMG/M
3300012911|Ga0157301_10087765Not Available889Open in IMG/M
3300012914|Ga0157297_10017895Not Available1550Open in IMG/M
3300012915|Ga0157302_10066733All Organisms → cellular organisms → Bacteria → Proteobacteria1058Open in IMG/M
3300012961|Ga0164302_10065828All Organisms → cellular organisms → Bacteria → Proteobacteria1869Open in IMG/M
3300012985|Ga0164308_12065352Not Available531Open in IMG/M
3300013297|Ga0157378_10245327All Organisms → cellular organisms → Bacteria1713Open in IMG/M
3300013306|Ga0163162_10221058Not Available2024Open in IMG/M
3300013306|Ga0163162_13039436Not Available539Open in IMG/M
3300013308|Ga0157375_11577324Not Available776Open in IMG/M
3300013308|Ga0157375_11681062Not Available751Open in IMG/M
3300014325|Ga0163163_11278472Not Available796Open in IMG/M
3300014325|Ga0163163_12929071Not Available533Open in IMG/M
3300015077|Ga0173483_10984529Not Available504Open in IMG/M
3300015200|Ga0173480_10052266All Organisms → cellular organisms → Bacteria → Proteobacteria1842Open in IMG/M
3300015374|Ga0132255_100217576All Organisms → cellular organisms → Bacteria → Proteobacteria2712Open in IMG/M
3300017792|Ga0163161_10869629Not Available762Open in IMG/M
3300017792|Ga0163161_11620502Not Available571Open in IMG/M
3300018031|Ga0184634_10048439Not Available1749Open in IMG/M
3300018070|Ga0184631_10405043Not Available562Open in IMG/M
3300018073|Ga0184624_10427956Not Available584Open in IMG/M
3300018082|Ga0184639_10094036All Organisms → cellular organisms → Bacteria → Proteobacteria1581Open in IMG/M
3300018083|Ga0184628_10088903All Organisms → cellular organisms → Bacteria → Proteobacteria1582Open in IMG/M
3300018476|Ga0190274_10831144Not Available984Open in IMG/M
3300019362|Ga0173479_10102364Not Available1063Open in IMG/M
3300021082|Ga0210380_10459517Not Available583Open in IMG/M
3300021082|Ga0210380_10517153Not Available547Open in IMG/M
3300022886|Ga0247746_1110039All Organisms → cellular organisms → Bacteria → Proteobacteria680Open in IMG/M
3300025271|Ga0207666_1001036All Organisms → cellular organisms → Bacteria → Proteobacteria3298Open in IMG/M
3300025893|Ga0207682_10004805All Organisms → cellular organisms → Bacteria → Proteobacteria5599Open in IMG/M
3300025901|Ga0207688_10068453All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas2010Open in IMG/M
3300025907|Ga0207645_10409652Not Available912Open in IMG/M
3300025908|Ga0207643_10042394Not Available2566Open in IMG/M
3300025918|Ga0207662_10275179All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA31112Open in IMG/M
3300025923|Ga0207681_10977236Not Available710Open in IMG/M
3300025923|Ga0207681_11595357Not Available546Open in IMG/M
3300025925|Ga0207650_11004864Not Available709Open in IMG/M
3300025926|Ga0207659_11067540Not Available695Open in IMG/M
3300025926|Ga0207659_11096804Not Available685Open in IMG/M
3300025930|Ga0207701_10658159Not Available889Open in IMG/M
3300025931|Ga0207644_10118728All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas2010Open in IMG/M
3300025931|Ga0207644_10214369Not Available1523Open in IMG/M
3300025931|Ga0207644_10381177Not Available1150Open in IMG/M
3300025936|Ga0207670_11292660Not Available618Open in IMG/M
3300025938|Ga0207704_10245124All Organisms → cellular organisms → Bacteria1341Open in IMG/M
3300025972|Ga0207668_11104606Not Available711Open in IMG/M
3300026023|Ga0207677_11104282Not Available723Open in IMG/M
3300026035|Ga0207703_11061440Not Available778Open in IMG/M
3300026088|Ga0207641_12443382Not Available521Open in IMG/M
3300026118|Ga0207675_100062209All Organisms → cellular organisms → Bacteria3486Open in IMG/M
3300028380|Ga0268265_10314690Not Available1415Open in IMG/M
3300028802|Ga0307503_10089256All Organisms → cellular organisms → Bacteria → Proteobacteria1286Open in IMG/M
3300032013|Ga0310906_10467568All Organisms → cellular organisms → Bacteria → Proteobacteria847Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere15.45%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil13.64%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere9.09%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere7.27%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere6.36%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment4.55%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.64%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.64%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.64%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.73%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere2.73%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.73%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.73%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.73%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.82%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.82%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.82%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere1.82%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.82%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.91%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.91%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.91%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.91%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.91%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.91%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.91%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.91%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002239Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2Host-AssociatedOpen in IMG/M
3300005148Soil and rhizosphere microbial communities from Laval, Canada - mgLMAEnvironmentalOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300009011Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaGHost-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300011398Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT600_2EnvironmentalOpen in IMG/M
3300012506Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.old.040610Host-AssociatedOpen in IMG/M
3300012893Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1EnvironmentalOpen in IMG/M
3300012904Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1EnvironmentalOpen in IMG/M
3300012909Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1EnvironmentalOpen in IMG/M
3300012910Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2EnvironmentalOpen in IMG/M
3300012911Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2EnvironmentalOpen in IMG/M
3300012914Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2EnvironmentalOpen in IMG/M
3300012915Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2EnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018031Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1EnvironmentalOpen in IMG/M
3300018070Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b1EnvironmentalOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2EnvironmentalOpen in IMG/M
3300018083Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1EnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300021082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redoEnvironmentalOpen in IMG/M
3300022886Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5EnvironmentalOpen in IMG/M
3300025271Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI24034J26672_1001408913300002239Corn, Switchgrass And Miscanthus RhizosphereVASSRDCVEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTANGGAVVALVDGARGD
Ga0066819_102510123300005148SoilVASSRDCVEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN*
Ga0065712_1034498133300005290Miscanthus RhizosphereVASSRDCVEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTANGGAVVALVDGARG
Ga0065705_1036675623300005294Switchgrass RhizosphereVASSRDCVEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDG
Ga0065705_1060341523300005294Switchgrass RhizosphereCVEIFLALTQGERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN*
Ga0065707_1001792413300005295Switchgrass RhizosphereVEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLELILHXGXXIALTANGGAVVALVDGARGDN*
Ga0070676_1006830013300005328Miscanthus RhizosphereHEVASSRDCVEIFLALTQAERSALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTANGGAVVALVDGARGDN*
Ga0070676_1048079613300005328Miscanthus RhizosphereLVASSRDGVELFLTLTQGERNALKAVASGMVGTVSLLHLGKLKSLELIRRDGGNIGL
Ga0070670_10017354543300005331Switchgrass RhizosphereVASSRDCVEILLALTQAECTALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN*
Ga0070670_10018641943300005331Switchgrass RhizosphereVASSRDCVEILLALTQAECTSLKAVASGKIGTVSILQLGKLKSLDLVHHDGRNIALTTDGRAVVDLVDRTPLATLPIEKLSNDEV*
Ga0070670_10053675113300005331Switchgrass RhizosphereERNALKAVADGMVGTVSLLHLGKLKSLELIRRDGGNIGLTTKGRAVVALIDRTR*
Ga0070670_10150224013300005331Switchgrass RhizosphereVASSRDCVEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTANGGAVVALVDGARGDN*
Ga0070670_10165577313300005331Switchgrass RhizosphereVASSRDCVEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN*GRSD
Ga0070677_1006871733300005333Miscanthus RhizosphereLRGEQLVASSRDGVELFLTLTQGERNALKAVASGMVGTVSLLHLGKLKSLELIRRDGGNIGLTTKGRAVVALIDRTR*
Ga0070666_1125943023300005335Switchgrass RhizosphereVASSRDGVELFLTLTQGERNALKAVASGMVGTVSLLHLGKLKSLELIRRDGRNIALTTKGRAVVALVDRSREDV*
Ga0070689_10158733923300005340Switchgrass RhizosphereVASSRDGVELFLTLTQGERNALKAVASGMVGTVSLLHLGKLKSLELIRRDGGNIGLTTKGRAVVAL
Ga0070669_10045112233300005353Switchgrass RhizosphereGWHRRVIAWKSFLALTQGERNALKTVASGKGGSVSIVQLSKLKSFDLVDHDGRAIVLTAHGRAVEALVDRTR*
Ga0070675_10059761933300005354Miscanthus RhizosphereVEILLALTQAECTSLKAVASGKIGTVSILQLGKLKSLDLVHHDGRNIALTTDGRAVVDLVDRTPLATLPIEKLSNDEV*
Ga0070675_10109141313300005354Miscanthus RhizosphereMASSRDCVEVFLALTQGERNALKTVASGKGGSVSIVQLSKLKSFDLVDHDGRAIVLTAHGRAVEALV
Ga0070671_10011573543300005355Switchgrass RhizosphereVASSRDGVELFLTLTQGERNALKAVASGMVGTVSLLHLGKLKSLELIRRDGGNIGLTTKGRAVVALIDRTR*
Ga0070671_10049024833300005355Switchgrass RhizosphereVASSRDCVEVFLALTQGERNALKAVADGMVGTVSLLHLGKLKSLELIRRDGGNIGLTTKGRAVVAL
Ga0070671_10090783613300005355Switchgrass RhizosphereLTQGERNALKAVASGMVGTVSLLHLGKLKSLELIRRDGRNIALTTKGRAVVALVDRSREDV*
Ga0070701_1002148643300005438Corn, Switchgrass And Miscanthus RhizosphereLAGEHEVASSRDCVEIFLALTQAERSALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTANGGAVVALVDGARGDN*
Ga0070678_10051783313300005456Miscanthus RhizosphereMASSRDCVEVFLALTQGERNALKTVASGKGGSVSIVQLSKLKSFDLVDHDGRAIVLTAHGRAVEALVDRTR*
Ga0070662_10006808143300005457Corn RhizosphereVASSRDCVEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTANGGAVV
Ga0070672_10191566523300005543Miscanthus RhizosphereVASSGDCVEVFLALTQGERNALKAVADGMVGTVSLLHLGKLKSLELIRRDGGNIGLTTKGRAV
Ga0070704_10004315253300005549Corn, Switchgrass And Miscanthus RhizosphereLAGEHEVASSRDCVEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTANGGAVVALVDGARGDN*
Ga0070664_10080520433300005564Corn RhizosphereLALTQAECTSLKAVASGKIGTVSILQLGKLKSLDLVHHDGRNIALTTDGRAVVDLVDRTPLATLPIEKLSNDEV*
Ga0068861_10073707023300005719Switchgrass RhizosphereVASSHDGVELFLALTQGERNALKAVASGMVGTVSLLHLGKLKSLELIRRDGGNIGLTTKGRAVVALIDRTR*
Ga0068870_1109932313300005840Miscanthus RhizosphereQGERNALKAVASGMVGTVSLLHLGKLKSLELIRRDGGNIGLTTKGRAVVALIDRTR*
Ga0068863_10091978713300005841Switchgrass RhizosphereSSRDCVEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLELILHDGRNVALTTNGRAVVDLVDQTP*
Ga0068858_10031296843300005842Switchgrass RhizosphereVASSRDGVELFLTLTQGERNALKAVASGMVGTVSLLHLGKLKSLELIRRDGGNIGLTTKGRAVVALID
Ga0068858_10241284813300005842Switchgrass RhizosphereVASSRDCVEVFLALTQGERNALKAVADGMVGTVSIQHLGKLKALELVDHDGRKVALTTEGRAVVALVDRTS*
Ga0097621_10018331413300006237Miscanthus RhizosphereVASSGDCVEVFLALTQGERNALKAVADGMVGTVSLLHLGKLKSLELIRRDGGNIGLTTKGRAVVALVDRTS*
Ga0075429_10082720223300006880Populus RhizosphereEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN*
Ga0105251_1013099323300009011Switchgrass RhizosphereLAGEHEVASSRDCVEILLALTQAECTALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN*
Ga0111539_1016787313300009094Populus RhizosphereKFKHIDGGHEVASSRDCVEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN*
Ga0111539_1181159713300009094Populus RhizosphereVEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTTDGRAVVDLVDRTPLATLPIEKLSNDEV*
Ga0105245_1008080043300009098Miscanthus RhizosphereVEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN*
Ga0105245_1278341323300009098Miscanthus RhizosphereVEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTANGGAVVALV
Ga0105243_1005129133300009148Miscanthus RhizosphereVEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTANGGAVVALVDGARGDN*
Ga0105243_1119680633300009148Miscanthus RhizosphereVILINSRKLKYAKLSILLRGEQLVASSRDGVELFLTLTQGERNALKAVASGMVGTVSLLHLGKLKSLELIRRDGGNIGLTTKGRAVVALIDRTR*
Ga0105243_1251700623300009148Miscanthus RhizosphereMASSRDCVEVFLALTQGERNALKTVASGKGGSVSIVQLSKLKSFDLVDHDGRAIVLTAHGRAVEALVDRT
Ga0111538_1021965633300009156Populus RhizosphereVASSHDGVELFLALTQGERNALKAVASGMVGTVSLLHLGKLKSLELIRRDGRNIALTTKGRAVVALVDRSREDV*
Ga0105242_1264087023300009176Miscanthus RhizosphereLAGEHEVASSRDCGEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTANGGAVVALVDGARGDN*
Ga0105248_1093115423300009177Switchgrass RhizosphereVASSHDGVELFLALTQGERNALKAVASGMVGTVSLLHLGKLKSLELIRRDGRNIALTTKGRAVVALIDRTR*
Ga0105249_1138154023300009553Switchgrass RhizosphereVEILLALTQAECTSLKAVASGKIGTVSILQLGKLKSLDLVHHDGRNIALTTDGRAVVDLVDRTP*
Ga0134124_1083213823300010397Terrestrial SoilVEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTTDGQTVVDLVDRTPLPTLPIGKRSNDKV*
Ga0134124_1301827413300010397Terrestrial SoilLFLALTQGERNALKSVASGMVGTVSLLHLGKLKSLELIRRERRNIGLTTKGRAVLALIDRSHEDG*
Ga0134127_1011373823300010399Terrestrial SoilVEIFLALTQGERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN*
Ga0105246_1119072723300011119Miscanthus RhizosphereVEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVV
Ga0137348_103690923300011398SoilVEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLEIILHNGRNIALTANGGAVVALVDGARGDN*
Ga0157324_105348113300012506Arabidopsis RhizosphereEVASSRDCVEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTANGGAVVALVDGARGDN*
Ga0157284_1000390443300012893SoilGGGHEVASSRDCVEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN*
Ga0157284_1003149923300012893SoilVEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTTDGQTVVDLVDRTPLPTLPIGKRCNNEV
Ga0157282_1014417623300012904SoilVEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGG
Ga0157290_1004942313300012909SoilVEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGA
Ga0157308_1008456633300012910SoilVEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLIHHDGRNVALTTDGRAVVDLVDRTP*
Ga0157301_1008776523300012911SoilVEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTTDGQTVVDLVDRTPLPTLPIGKRCNNEV*
Ga0157297_1001789513300012914SoilVEILLALTQAERNALKAVASGMVGTVSILQLGKLKSLDLVHHDGRNIALTTDGRAVVDLVDRTPLATLPIEKLSNDEV*
Ga0157302_1006673323300012915SoilMESSRDCLELFLALTQGERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN*
Ga0164302_1006582813300012961SoilRISRKFKHIGGGHEVASSRDCVEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN*
Ga0164308_1206535213300012985SoilVEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLELILHNGRKIALTANGGAVVALVDGARGDN*
Ga0157378_1024532743300013297Miscanthus RhizosphereLVASSRDGVELFLTLTQGERNALKAVASGMVGTVSLLHLGKLKSLELIRRDGGNIGLTTKGRAVVALIDRTR*
Ga0163162_1022105843300013306Switchgrass RhizosphereMASSRDCVEVFLALTQGERNALKTVASGKGGSVSIVQLSKLKSFDLVDHDGRAIVLTTHGRAVEALVDRTR*
Ga0163162_1303943623300013306Switchgrass RhizosphereVEILLALTQAECTALKAVASGMVGTVSILQLGKLKSLDLVHHDGRNIALTTDGRAVVDLVDRTP*
Ga0157375_1157732433300013308Miscanthus RhizosphereVEILLALTQAECTALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDG
Ga0157375_1168106223300013308Miscanthus RhizosphereVEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALV
Ga0163163_1127847223300014325Switchgrass RhizosphereVEILLALTQAECTALKAVASGMVGTVSILQLGKLKSLDLVHHDGRNIALTTDGRAVVDLVDRTPLPTLPIGKRSNDKV*
Ga0163163_1292907113300014325Switchgrass RhizosphereHEVASSRDCVEILLALTQAECTSLKAVASGKIGTVSILQLGKLKSLDLVHHDGRNIALTTDGRAVVDLVDRTPLATLPIEKLSNDEV*
Ga0173483_1098452923300015077SoilVEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTANGGAVVALVDGARG
Ga0173480_1005226633300015200SoilDCVEIFLALTQAERNALKAVASGMVGTGSILQLGRLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN*
Ga0132255_10021757613300015374Arabidopsis RhizosphereVEIFLALTQAERSALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTANGGAVVALVDGARGDN*
Ga0163161_1086962913300017792Switchgrass RhizosphereVASSRDCVEILLALTQAECTALKAVASDMIGTVSLVQLGKLKSLNLIHHDGRNIALTTDGRAVVD
Ga0163161_1162050213300017792Switchgrass RhizosphereVASSRDCVEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTANGGAVVALVDGARGDN
Ga0184634_1004843943300018031Groundwater SedimentVATSRDCVEILLALTQAECTALKAVASGKVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN
Ga0184631_1040504323300018070Groundwater SedimentVASSRDRVELFLGLTQGERNALKAVASGKIGTVSIAQLGKLKSLDLVHHDGRNIALTTNGRAVVDLVDRTP
Ga0184624_1042795623300018073Groundwater SedimentVASSRDRVELFLRLTQGERNALKAVASAMVGTVGIAQLGRLWSLELILHNGRNIALT
Ga0184639_1009403613300018082Groundwater SedimentRISRKFKHIGGGHEVASSRDCVEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN
Ga0184628_1008890323300018083Groundwater SedimentGGGHEVASSRDCVEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN
Ga0190274_1083114413300018476SoilVASSRDCVEILLALTQAECTALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN
Ga0173479_1010236423300019362SoilVASSRDCVEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN
Ga0210380_1045951723300021082Groundwater SedimentVANLNICGGGHEVASSRDCVEIFLALTQAERTALKTVAAGKIGTVSIAQLAKFKSLDLLHHDGRNIALTTNGRAVVDLVDRTP
Ga0210380_1051715313300021082Groundwater SedimentVASSRDCVEILLALTQAECTSLKAVASGKIGTVSILQLGKLKSLDLVHHDGRNIALTTDGRAVVDLVDRTPLATLPIE
Ga0247746_111003913300022886SoilGHEVASSRDCVEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN
Ga0207666_100103623300025271Corn, Switchgrass And Miscanthus RhizosphereVEIFLALTQAERSALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTANGGAVVALVDGARGDN
Ga0207682_1000480553300025893Miscanthus RhizosphereVEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN
Ga0207688_1006845323300025901Corn, Switchgrass And Miscanthus RhizosphereMASSRDCVEVFLALTQGERNALKTVASGKGGSVSIVQLSKLKSFDLVDHDGRAIVLTAHGRAVEALVDRTR
Ga0207645_1040965233300025907Miscanthus RhizosphereVASSRDGVELFLTLTQGERNALKAVASGMVGTVSLLHLGKLKSLELIRRDGGNIGL
Ga0207643_1004239463300025908Miscanthus RhizosphereMASSRDCVEVFLALTQGERNALKTVASGKGGSVSIVQLSKLKSFDLVDNDGRAIVLTTHGRAVEALVDRTR
Ga0207662_1027517933300025918Switchgrass RhizosphereVASSRDGVELFLTLTQGERNALKAVASGMVGTVSLLHLGTLKSLELIRRDGGNIGLTTKGRAVVALIDRTR
Ga0207681_1097723623300025923Switchgrass RhizosphereVASSRDCVEILLALTQAECTALKAVASGMVGTVSILQLGKLKSLDLVHHDGRNIALTTDGRAVVDLVDRTPLATLPIEKLSNDEV
Ga0207681_1159535723300025923Switchgrass RhizosphereDCVEVFLALTQGERNALKTVASGKGGSVSIVQLSKLKSFDLVDHDGRAIVLTAHGRAVEALVDRTR
Ga0207650_1100486413300025925Switchgrass RhizosphereVASSRDCVEILLALTQAECTSLKAVASGKIGTVSILQLGKLKSLDLVHHDGRNIALTTDGRAVVDLVDRTPLATLPIEKLSNDEV
Ga0207659_1106754023300025926Miscanthus RhizosphereVASSHDGVELFLALTQGERNALKAVASGMVGTVSLLHLGKLKSLELIRRDGRNIAL
Ga0207659_1109680413300025926Miscanthus RhizosphereVEILLALTQAECTSLKAVASGKIGTVSILQLGKLKSLDLVHHDGRNIALTTDGRAVVDLVDRTPLATLPIEKLSNDEV
Ga0207701_1065815923300025930Corn, Switchgrass And Miscanthus RhizosphereMASSRDCVEVFLALTQGERNALKTVASGKGGSVSIVQLSKLKSFDLVDHDGRAIVLTTHGRAVEALVDRTR
Ga0207644_1011872823300025931Switchgrass RhizosphereVASSRDGVELFLTLTQGERNALKAVASGMVGTVSLLHLGKLKSLELIRRDGGNIGLTTKGRAVVALIDRTR
Ga0207644_1021436943300025931Switchgrass RhizosphereVEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTANGGAVVALVDGARGDN
Ga0207644_1038117723300025931Switchgrass RhizosphereVASSHDGVELFLALTQGERNALKAVASGMVGTVSLLHLGKLKSLELIRRDGRNIALTTKGRAVVALVDRSREDV
Ga0207670_1129266033300025936Switchgrass RhizosphereVASSRDGVELFLTLTQGERNALKAVASGMVGTVSLLHLGKLKSLELIRRDGGNIGLTTKGRAVVALIDR
Ga0207704_1024512413300025938Miscanthus RhizosphereVASSRDGVELFLTLTQGERNALKAVASGMVGTVSLLHLGKLKSLELIRRDGGNIGLTTKGRAVV
Ga0207668_1110460613300025972Switchgrass RhizosphereVEIFLALTQAERNALKAVASGMVGTVSILQLGKLWSLELILHNGRNIALTTDGRAVVDLVDRTPLPTLPIGKRSNDKVS
Ga0207677_1110428223300026023Miscanthus RhizosphereMASSRDCVEVFLALTQGERNALKTVASGKGGSVSIVQLSKLKSFDLVDNDGRAIVLTTHGRAVEAL
Ga0207703_1106144013300026035Switchgrass RhizosphereVASSRDGVELFLTLTQGERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN
Ga0207641_1244338213300026088Switchgrass RhizosphereIFLALTQGERNALKAVASGMVGTVGIAQLGRLWSLELILHDGRNVALTTNGRAVVDLVDQTP
Ga0207675_10006220943300026118Switchgrass RhizosphereVASSRDCVEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHPDGSKIALTANGGAVVALVDGARGDN
Ga0268265_1031469033300028380Switchgrass RhizosphereVASSRDCVEIFLALTQGERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN
Ga0307503_1008925623300028802SoilHDVASSRDCVEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN
Ga0310906_1046756813300032013SoilVASSRDCVEIFLALTQAERSALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTANGGAVVALVDGARGDN


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.