Basic Information | |
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Family ID | F087365 |
Family Type | Metagenome |
Number of Sequences | 110 |
Average Sequence Length | 71 residues |
Representative Sequence | VASSRDCVEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDG |
Number of Associated Samples | 85 |
Number of Associated Scaffolds | 110 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 46.36 % |
% of genes near scaffold ends (potentially truncated) | 47.27 % |
% of genes from short scaffolds (< 2000 bps) | 82.73 % |
Associated GOLD sequencing projects | 74 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (65.455 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere (15.454 % of family members) |
Environment Ontology (ENVO) | Unclassified (60.000 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (74.545 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 33.33% β-sheet: 33.33% Coil/Unstructured: 33.33% | Feature Viewer |
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Pfam ID | Name | % Frequency in 110 Family Scaffolds |
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PF00216 | Bac_DNA_binding | 12.73 |
PF13411 | MerR_1 | 11.82 |
PF00072 | Response_reg | 3.64 |
PF00589 | Phage_integrase | 3.64 |
PF02798 | GST_N | 3.64 |
PF12244 | DUF3606 | 3.64 |
PF13417 | GST_N_3 | 1.82 |
PF07589 | PEP-CTERM | 1.82 |
PF00903 | Glyoxalase | 1.82 |
PF12796 | Ank_2 | 0.91 |
PF07238 | PilZ | 0.91 |
PF00376 | MerR | 0.91 |
PF09278 | MerR-DNA-bind | 0.91 |
PF02355 | SecD_SecF | 0.91 |
PF12681 | Glyoxalase_2 | 0.91 |
COG ID | Name | Functional Category | % Frequency in 110 Family Scaffolds |
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COG0776 | Bacterial nucleoid DNA-binding protein IHF-alpha | Replication, recombination and repair [L] | 12.73 |
COG0341 | Preprotein translocase subunit SecF | Intracellular trafficking, secretion, and vesicular transport [U] | 0.91 |
COG0342 | Preprotein translocase subunit SecD | Intracellular trafficking, secretion, and vesicular transport [U] | 0.91 |
COG0789 | DNA-binding transcriptional regulator, MerR family | Transcription [K] | 0.91 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 65.45 % |
All Organisms | root | All Organisms | 34.55 % |
Visualization |
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Habitat | Taxonomy | Distribution |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 15.45% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 13.64% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 9.09% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 7.27% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 6.36% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 4.55% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 3.64% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 3.64% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 3.64% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 2.73% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere | 2.73% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 2.73% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 2.73% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 2.73% |
Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 1.82% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 1.82% |
Corn, Switchgrass And Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 1.82% |
Switchgrass Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere | 1.82% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 1.82% |
Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 0.91% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.91% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 0.91% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 0.91% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere | 0.91% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 0.91% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 0.91% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.91% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere | 0.91% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere | 0.91% |
Miscanthus Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere | 0.91% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300002239 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 | Host-Associated | Open in IMG/M |
3300005148 | Soil and rhizosphere microbial communities from Laval, Canada - mgLMA | Environmental | Open in IMG/M |
3300005290 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 | Host-Associated | Open in IMG/M |
3300005294 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil | Environmental | Open in IMG/M |
3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 | Environmental | Open in IMG/M |
3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Host-Associated | Open in IMG/M |
3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Host-Associated | Open in IMG/M |
3300005333 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG | Host-Associated | Open in IMG/M |
3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Host-Associated | Open in IMG/M |
3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Environmental | Open in IMG/M |
3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Host-Associated | Open in IMG/M |
3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Host-Associated | Open in IMG/M |
3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Host-Associated | Open in IMG/M |
3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Environmental | Open in IMG/M |
3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Host-Associated | Open in IMG/M |
3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Host-Associated | Open in IMG/M |
3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Host-Associated | Open in IMG/M |
3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Environmental | Open in IMG/M |
3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Host-Associated | Open in IMG/M |
3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Host-Associated | Open in IMG/M |
3300005840 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 | Host-Associated | Open in IMG/M |
3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Host-Associated | Open in IMG/M |
3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Host-Associated | Open in IMG/M |
3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) | Host-Associated | Open in IMG/M |
3300006880 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Host-Associated | Open in IMG/M |
3300009011 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG | Host-Associated | Open in IMG/M |
3300009094 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) | Host-Associated | Open in IMG/M |
3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Host-Associated | Open in IMG/M |
3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Host-Associated | Open in IMG/M |
3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Host-Associated | Open in IMG/M |
3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Host-Associated | Open in IMG/M |
3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
3300010397 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4 | Environmental | Open in IMG/M |
3300010399 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3 | Environmental | Open in IMG/M |
3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Host-Associated | Open in IMG/M |
3300011398 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT600_2 | Environmental | Open in IMG/M |
3300012506 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.old.040610 | Host-Associated | Open in IMG/M |
3300012893 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1 | Environmental | Open in IMG/M |
3300012904 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1 | Environmental | Open in IMG/M |
3300012909 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1 | Environmental | Open in IMG/M |
3300012910 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2 | Environmental | Open in IMG/M |
3300012911 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2 | Environmental | Open in IMG/M |
3300012914 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2 | Environmental | Open in IMG/M |
3300012915 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2 | Environmental | Open in IMG/M |
3300012961 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG | Environmental | Open in IMG/M |
3300012985 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG | Environmental | Open in IMG/M |
3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Host-Associated | Open in IMG/M |
3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Host-Associated | Open in IMG/M |
3300015077 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2) | Environmental | Open in IMG/M |
3300015200 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2) | Environmental | Open in IMG/M |
3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Host-Associated | Open in IMG/M |
3300018031 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1 | Environmental | Open in IMG/M |
3300018070 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b1 | Environmental | Open in IMG/M |
3300018073 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1 | Environmental | Open in IMG/M |
3300018082 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2 | Environmental | Open in IMG/M |
3300018083 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1 | Environmental | Open in IMG/M |
3300018476 | Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T | Environmental | Open in IMG/M |
3300019362 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2) | Environmental | Open in IMG/M |
3300021082 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo | Environmental | Open in IMG/M |
3300022886 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5 | Environmental | Open in IMG/M |
3300025271 | Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes) | Environmental | Open in IMG/M |
3300025893 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) | Host-Associated | Open in IMG/M |
3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) | Environmental | Open in IMG/M |
3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025930 | Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) | Environmental | Open in IMG/M |
3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) | Environmental | Open in IMG/M |
3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300028802 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S | Environmental | Open in IMG/M |
3300032013 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI24034J26672_100140891 | 3300002239 | Corn, Switchgrass And Miscanthus Rhizosphere | VASSRDCVEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTANGGAVVALVDGARGD |
Ga0066819_10251012 | 3300005148 | Soil | VASSRDCVEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN* |
Ga0065712_103449813 | 3300005290 | Miscanthus Rhizosphere | VASSRDCVEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTANGGAVVALVDGARG |
Ga0065705_103667562 | 3300005294 | Switchgrass Rhizosphere | VASSRDCVEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDG |
Ga0065705_106034152 | 3300005294 | Switchgrass Rhizosphere | CVEIFLALTQGERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN* |
Ga0065707_100179241 | 3300005295 | Switchgrass Rhizosphere | VEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLELILHXGXXIALTANGGAVVALVDGARGDN* |
Ga0070676_100683001 | 3300005328 | Miscanthus Rhizosphere | HEVASSRDCVEIFLALTQAERSALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTANGGAVVALVDGARGDN* |
Ga0070676_104807961 | 3300005328 | Miscanthus Rhizosphere | LVASSRDGVELFLTLTQGERNALKAVASGMVGTVSLLHLGKLKSLELIRRDGGNIGL |
Ga0070670_1001735454 | 3300005331 | Switchgrass Rhizosphere | VASSRDCVEILLALTQAECTALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN* |
Ga0070670_1001864194 | 3300005331 | Switchgrass Rhizosphere | VASSRDCVEILLALTQAECTSLKAVASGKIGTVSILQLGKLKSLDLVHHDGRNIALTTDGRAVVDLVDRTPLATLPIEKLSNDEV* |
Ga0070670_1005367511 | 3300005331 | Switchgrass Rhizosphere | ERNALKAVADGMVGTVSLLHLGKLKSLELIRRDGGNIGLTTKGRAVVALIDRTR* |
Ga0070670_1015022401 | 3300005331 | Switchgrass Rhizosphere | VASSRDCVEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTANGGAVVALVDGARGDN* |
Ga0070670_1016557731 | 3300005331 | Switchgrass Rhizosphere | VASSRDCVEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN*GRSD |
Ga0070677_100687173 | 3300005333 | Miscanthus Rhizosphere | LRGEQLVASSRDGVELFLTLTQGERNALKAVASGMVGTVSLLHLGKLKSLELIRRDGGNIGLTTKGRAVVALIDRTR* |
Ga0070666_112594302 | 3300005335 | Switchgrass Rhizosphere | VASSRDGVELFLTLTQGERNALKAVASGMVGTVSLLHLGKLKSLELIRRDGRNIALTTKGRAVVALVDRSREDV* |
Ga0070689_1015873392 | 3300005340 | Switchgrass Rhizosphere | VASSRDGVELFLTLTQGERNALKAVASGMVGTVSLLHLGKLKSLELIRRDGGNIGLTTKGRAVVAL |
Ga0070669_1004511223 | 3300005353 | Switchgrass Rhizosphere | GWHRRVIAWKSFLALTQGERNALKTVASGKGGSVSIVQLSKLKSFDLVDHDGRAIVLTAHGRAVEALVDRTR* |
Ga0070675_1005976193 | 3300005354 | Miscanthus Rhizosphere | VEILLALTQAECTSLKAVASGKIGTVSILQLGKLKSLDLVHHDGRNIALTTDGRAVVDLVDRTPLATLPIEKLSNDEV* |
Ga0070675_1010914131 | 3300005354 | Miscanthus Rhizosphere | MASSRDCVEVFLALTQGERNALKTVASGKGGSVSIVQLSKLKSFDLVDHDGRAIVLTAHGRAVEALV |
Ga0070671_1001157354 | 3300005355 | Switchgrass Rhizosphere | VASSRDGVELFLTLTQGERNALKAVASGMVGTVSLLHLGKLKSLELIRRDGGNIGLTTKGRAVVALIDRTR* |
Ga0070671_1004902483 | 3300005355 | Switchgrass Rhizosphere | VASSRDCVEVFLALTQGERNALKAVADGMVGTVSLLHLGKLKSLELIRRDGGNIGLTTKGRAVVAL |
Ga0070671_1009078361 | 3300005355 | Switchgrass Rhizosphere | LTQGERNALKAVASGMVGTVSLLHLGKLKSLELIRRDGRNIALTTKGRAVVALVDRSREDV* |
Ga0070701_100214864 | 3300005438 | Corn, Switchgrass And Miscanthus Rhizosphere | LAGEHEVASSRDCVEIFLALTQAERSALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTANGGAVVALVDGARGDN* |
Ga0070678_1005178331 | 3300005456 | Miscanthus Rhizosphere | MASSRDCVEVFLALTQGERNALKTVASGKGGSVSIVQLSKLKSFDLVDHDGRAIVLTAHGRAVEALVDRTR* |
Ga0070662_1000680814 | 3300005457 | Corn Rhizosphere | VASSRDCVEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTANGGAVV |
Ga0070672_1019156652 | 3300005543 | Miscanthus Rhizosphere | VASSGDCVEVFLALTQGERNALKAVADGMVGTVSLLHLGKLKSLELIRRDGGNIGLTTKGRAV |
Ga0070704_1000431525 | 3300005549 | Corn, Switchgrass And Miscanthus Rhizosphere | LAGEHEVASSRDCVEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTANGGAVVALVDGARGDN* |
Ga0070664_1008052043 | 3300005564 | Corn Rhizosphere | LALTQAECTSLKAVASGKIGTVSILQLGKLKSLDLVHHDGRNIALTTDGRAVVDLVDRTPLATLPIEKLSNDEV* |
Ga0068861_1007370702 | 3300005719 | Switchgrass Rhizosphere | VASSHDGVELFLALTQGERNALKAVASGMVGTVSLLHLGKLKSLELIRRDGGNIGLTTKGRAVVALIDRTR* |
Ga0068870_110993231 | 3300005840 | Miscanthus Rhizosphere | QGERNALKAVASGMVGTVSLLHLGKLKSLELIRRDGGNIGLTTKGRAVVALIDRTR* |
Ga0068863_1009197871 | 3300005841 | Switchgrass Rhizosphere | SSRDCVEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLELILHDGRNVALTTNGRAVVDLVDQTP* |
Ga0068858_1003129684 | 3300005842 | Switchgrass Rhizosphere | VASSRDGVELFLTLTQGERNALKAVASGMVGTVSLLHLGKLKSLELIRRDGGNIGLTTKGRAVVALID |
Ga0068858_1024128481 | 3300005842 | Switchgrass Rhizosphere | VASSRDCVEVFLALTQGERNALKAVADGMVGTVSIQHLGKLKALELVDHDGRKVALTTEGRAVVALVDRTS* |
Ga0097621_1001833141 | 3300006237 | Miscanthus Rhizosphere | VASSGDCVEVFLALTQGERNALKAVADGMVGTVSLLHLGKLKSLELIRRDGGNIGLTTKGRAVVALVDRTS* |
Ga0075429_1008272022 | 3300006880 | Populus Rhizosphere | EIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN* |
Ga0105251_101309932 | 3300009011 | Switchgrass Rhizosphere | LAGEHEVASSRDCVEILLALTQAECTALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN* |
Ga0111539_101678731 | 3300009094 | Populus Rhizosphere | KFKHIDGGHEVASSRDCVEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN* |
Ga0111539_118115971 | 3300009094 | Populus Rhizosphere | VEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTTDGRAVVDLVDRTPLATLPIEKLSNDEV* |
Ga0105245_100808004 | 3300009098 | Miscanthus Rhizosphere | VEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN* |
Ga0105245_127834132 | 3300009098 | Miscanthus Rhizosphere | VEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTANGGAVVALV |
Ga0105243_100512913 | 3300009148 | Miscanthus Rhizosphere | VEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTANGGAVVALVDGARGDN* |
Ga0105243_111968063 | 3300009148 | Miscanthus Rhizosphere | VILINSRKLKYAKLSILLRGEQLVASSRDGVELFLTLTQGERNALKAVASGMVGTVSLLHLGKLKSLELIRRDGGNIGLTTKGRAVVALIDRTR* |
Ga0105243_125170062 | 3300009148 | Miscanthus Rhizosphere | MASSRDCVEVFLALTQGERNALKTVASGKGGSVSIVQLSKLKSFDLVDHDGRAIVLTAHGRAVEALVDRT |
Ga0111538_102196563 | 3300009156 | Populus Rhizosphere | VASSHDGVELFLALTQGERNALKAVASGMVGTVSLLHLGKLKSLELIRRDGRNIALTTKGRAVVALVDRSREDV* |
Ga0105242_126408702 | 3300009176 | Miscanthus Rhizosphere | LAGEHEVASSRDCGEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTANGGAVVALVDGARGDN* |
Ga0105248_109311542 | 3300009177 | Switchgrass Rhizosphere | VASSHDGVELFLALTQGERNALKAVASGMVGTVSLLHLGKLKSLELIRRDGRNIALTTKGRAVVALIDRTR* |
Ga0105249_113815402 | 3300009553 | Switchgrass Rhizosphere | VEILLALTQAECTSLKAVASGKIGTVSILQLGKLKSLDLVHHDGRNIALTTDGRAVVDLVDRTP* |
Ga0134124_108321382 | 3300010397 | Terrestrial Soil | VEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTTDGQTVVDLVDRTPLPTLPIGKRSNDKV* |
Ga0134124_130182741 | 3300010397 | Terrestrial Soil | LFLALTQGERNALKSVASGMVGTVSLLHLGKLKSLELIRRERRNIGLTTKGRAVLALIDRSHEDG* |
Ga0134127_101137382 | 3300010399 | Terrestrial Soil | VEIFLALTQGERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN* |
Ga0105246_111907272 | 3300011119 | Miscanthus Rhizosphere | VEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVV |
Ga0137348_10369092 | 3300011398 | Soil | VEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLEIILHNGRNIALTANGGAVVALVDGARGDN* |
Ga0157324_10534811 | 3300012506 | Arabidopsis Rhizosphere | EVASSRDCVEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTANGGAVVALVDGARGDN* |
Ga0157284_100039044 | 3300012893 | Soil | GGGHEVASSRDCVEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN* |
Ga0157284_100314992 | 3300012893 | Soil | VEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTTDGQTVVDLVDRTPLPTLPIGKRCNNEV |
Ga0157282_101441762 | 3300012904 | Soil | VEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGG |
Ga0157290_100494231 | 3300012909 | Soil | VEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGA |
Ga0157308_100845663 | 3300012910 | Soil | VEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLIHHDGRNVALTTDGRAVVDLVDRTP* |
Ga0157301_100877652 | 3300012911 | Soil | VEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTTDGQTVVDLVDRTPLPTLPIGKRCNNEV* |
Ga0157297_100178951 | 3300012914 | Soil | VEILLALTQAERNALKAVASGMVGTVSILQLGKLKSLDLVHHDGRNIALTTDGRAVVDLVDRTPLATLPIEKLSNDEV* |
Ga0157302_100667332 | 3300012915 | Soil | MESSRDCLELFLALTQGERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN* |
Ga0164302_100658281 | 3300012961 | Soil | RISRKFKHIGGGHEVASSRDCVEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN* |
Ga0164308_120653521 | 3300012985 | Soil | VEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLELILHNGRKIALTANGGAVVALVDGARGDN* |
Ga0157378_102453274 | 3300013297 | Miscanthus Rhizosphere | LVASSRDGVELFLTLTQGERNALKAVASGMVGTVSLLHLGKLKSLELIRRDGGNIGLTTKGRAVVALIDRTR* |
Ga0163162_102210584 | 3300013306 | Switchgrass Rhizosphere | MASSRDCVEVFLALTQGERNALKTVASGKGGSVSIVQLSKLKSFDLVDHDGRAIVLTTHGRAVEALVDRTR* |
Ga0163162_130394362 | 3300013306 | Switchgrass Rhizosphere | VEILLALTQAECTALKAVASGMVGTVSILQLGKLKSLDLVHHDGRNIALTTDGRAVVDLVDRTP* |
Ga0157375_115773243 | 3300013308 | Miscanthus Rhizosphere | VEILLALTQAECTALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDG |
Ga0157375_116810622 | 3300013308 | Miscanthus Rhizosphere | VEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALV |
Ga0163163_112784722 | 3300014325 | Switchgrass Rhizosphere | VEILLALTQAECTALKAVASGMVGTVSILQLGKLKSLDLVHHDGRNIALTTDGRAVVDLVDRTPLPTLPIGKRSNDKV* |
Ga0163163_129290711 | 3300014325 | Switchgrass Rhizosphere | HEVASSRDCVEILLALTQAECTSLKAVASGKIGTVSILQLGKLKSLDLVHHDGRNIALTTDGRAVVDLVDRTPLATLPIEKLSNDEV* |
Ga0173483_109845292 | 3300015077 | Soil | VEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTANGGAVVALVDGARG |
Ga0173480_100522663 | 3300015200 | Soil | DCVEIFLALTQAERNALKAVASGMVGTGSILQLGRLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN* |
Ga0132255_1002175761 | 3300015374 | Arabidopsis Rhizosphere | VEIFLALTQAERSALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTANGGAVVALVDGARGDN* |
Ga0163161_108696291 | 3300017792 | Switchgrass Rhizosphere | VASSRDCVEILLALTQAECTALKAVASDMIGTVSLVQLGKLKSLNLIHHDGRNIALTTDGRAVVD |
Ga0163161_116205021 | 3300017792 | Switchgrass Rhizosphere | VASSRDCVEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTANGGAVVALVDGARGDN |
Ga0184634_100484394 | 3300018031 | Groundwater Sediment | VATSRDCVEILLALTQAECTALKAVASGKVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN |
Ga0184631_104050432 | 3300018070 | Groundwater Sediment | VASSRDRVELFLGLTQGERNALKAVASGKIGTVSIAQLGKLKSLDLVHHDGRNIALTTNGRAVVDLVDRTP |
Ga0184624_104279562 | 3300018073 | Groundwater Sediment | VASSRDRVELFLRLTQGERNALKAVASAMVGTVGIAQLGRLWSLELILHNGRNIALT |
Ga0184639_100940361 | 3300018082 | Groundwater Sediment | RISRKFKHIGGGHEVASSRDCVEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN |
Ga0184628_100889032 | 3300018083 | Groundwater Sediment | GGGHEVASSRDCVEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN |
Ga0190274_108311441 | 3300018476 | Soil | VASSRDCVEILLALTQAECTALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN |
Ga0173479_101023642 | 3300019362 | Soil | VASSRDCVEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN |
Ga0210380_104595172 | 3300021082 | Groundwater Sediment | VANLNICGGGHEVASSRDCVEIFLALTQAERTALKTVAAGKIGTVSIAQLAKFKSLDLLHHDGRNIALTTNGRAVVDLVDRTP |
Ga0210380_105171531 | 3300021082 | Groundwater Sediment | VASSRDCVEILLALTQAECTSLKAVASGKIGTVSILQLGKLKSLDLVHHDGRNIALTTDGRAVVDLVDRTPLATLPIE |
Ga0247746_11100391 | 3300022886 | Soil | GHEVASSRDCVEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN |
Ga0207666_10010362 | 3300025271 | Corn, Switchgrass And Miscanthus Rhizosphere | VEIFLALTQAERSALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTANGGAVVALVDGARGDN |
Ga0207682_100048055 | 3300025893 | Miscanthus Rhizosphere | VEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN |
Ga0207688_100684532 | 3300025901 | Corn, Switchgrass And Miscanthus Rhizosphere | MASSRDCVEVFLALTQGERNALKTVASGKGGSVSIVQLSKLKSFDLVDHDGRAIVLTAHGRAVEALVDRTR |
Ga0207645_104096523 | 3300025907 | Miscanthus Rhizosphere | VASSRDGVELFLTLTQGERNALKAVASGMVGTVSLLHLGKLKSLELIRRDGGNIGL |
Ga0207643_100423946 | 3300025908 | Miscanthus Rhizosphere | MASSRDCVEVFLALTQGERNALKTVASGKGGSVSIVQLSKLKSFDLVDNDGRAIVLTTHGRAVEALVDRTR |
Ga0207662_102751793 | 3300025918 | Switchgrass Rhizosphere | VASSRDGVELFLTLTQGERNALKAVASGMVGTVSLLHLGTLKSLELIRRDGGNIGLTTKGRAVVALIDRTR |
Ga0207681_109772362 | 3300025923 | Switchgrass Rhizosphere | VASSRDCVEILLALTQAECTALKAVASGMVGTVSILQLGKLKSLDLVHHDGRNIALTTDGRAVVDLVDRTPLATLPIEKLSNDEV |
Ga0207681_115953572 | 3300025923 | Switchgrass Rhizosphere | DCVEVFLALTQGERNALKTVASGKGGSVSIVQLSKLKSFDLVDHDGRAIVLTAHGRAVEALVDRTR |
Ga0207650_110048641 | 3300025925 | Switchgrass Rhizosphere | VASSRDCVEILLALTQAECTSLKAVASGKIGTVSILQLGKLKSLDLVHHDGRNIALTTDGRAVVDLVDRTPLATLPIEKLSNDEV |
Ga0207659_110675402 | 3300025926 | Miscanthus Rhizosphere | VASSHDGVELFLALTQGERNALKAVASGMVGTVSLLHLGKLKSLELIRRDGRNIAL |
Ga0207659_110968041 | 3300025926 | Miscanthus Rhizosphere | VEILLALTQAECTSLKAVASGKIGTVSILQLGKLKSLDLVHHDGRNIALTTDGRAVVDLVDRTPLATLPIEKLSNDEV |
Ga0207701_106581592 | 3300025930 | Corn, Switchgrass And Miscanthus Rhizosphere | MASSRDCVEVFLALTQGERNALKTVASGKGGSVSIVQLSKLKSFDLVDHDGRAIVLTTHGRAVEALVDRTR |
Ga0207644_101187282 | 3300025931 | Switchgrass Rhizosphere | VASSRDGVELFLTLTQGERNALKAVASGMVGTVSLLHLGKLKSLELIRRDGGNIGLTTKGRAVVALIDRTR |
Ga0207644_102143694 | 3300025931 | Switchgrass Rhizosphere | VEIFLALTQAERNALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTANGGAVVALVDGARGDN |
Ga0207644_103811772 | 3300025931 | Switchgrass Rhizosphere | VASSHDGVELFLALTQGERNALKAVASGMVGTVSLLHLGKLKSLELIRRDGRNIALTTKGRAVVALVDRSREDV |
Ga0207670_112926603 | 3300025936 | Switchgrass Rhizosphere | VASSRDGVELFLTLTQGERNALKAVASGMVGTVSLLHLGKLKSLELIRRDGGNIGLTTKGRAVVALIDR |
Ga0207704_102451241 | 3300025938 | Miscanthus Rhizosphere | VASSRDGVELFLTLTQGERNALKAVASGMVGTVSLLHLGKLKSLELIRRDGGNIGLTTKGRAVV |
Ga0207668_111046061 | 3300025972 | Switchgrass Rhizosphere | VEIFLALTQAERNALKAVASGMVGTVSILQLGKLWSLELILHNGRNIALTTDGRAVVDLVDRTPLPTLPIGKRSNDKVS |
Ga0207677_111042822 | 3300026023 | Miscanthus Rhizosphere | MASSRDCVEVFLALTQGERNALKTVASGKGGSVSIVQLSKLKSFDLVDNDGRAIVLTTHGRAVEAL |
Ga0207703_110614401 | 3300026035 | Switchgrass Rhizosphere | VASSRDGVELFLTLTQGERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN |
Ga0207641_124433821 | 3300026088 | Switchgrass Rhizosphere | IFLALTQGERNALKAVASGMVGTVGIAQLGRLWSLELILHDGRNVALTTNGRAVVDLVDQTP |
Ga0207675_1000622094 | 3300026118 | Switchgrass Rhizosphere | VASSRDCVEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHPDGSKIALTANGGAVVALVDGARGDN |
Ga0268265_103146903 | 3300028380 | Switchgrass Rhizosphere | VASSRDCVEIFLALTQGERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN |
Ga0307503_100892562 | 3300028802 | Soil | HDVASSRDCVEIFLALTQAERNALKAVASGMVGTVSILQLGKLRSLDLVHHDGSKIALTANGGAVVALVDGARGDN |
Ga0310906_104675681 | 3300032013 | Soil | VASSRDCVEIFLALTQAERSALKAVASGMVGTVGIAQLGRLWSLELILHNGRNIALTANGGAVVALVDGARGDN |
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