Basic Information | |
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Family ID | F087360 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 110 |
Average Sequence Length | 90 residues |
Representative Sequence | MALKMTRLFGGEPPRAAENMDFEPPTTQVRMGITSSEGYDPLTTMSVMEQLRAASTAAPTPSKTLLIGNLPVVKQFQVLGVLT |
Number of Associated Samples | 94 |
Number of Associated Scaffolds | 110 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 100.00 % |
% of genes near scaffold ends (potentially truncated) | 98.18 % |
% of genes from short scaffolds (< 2000 bps) | 95.45 % |
Associated GOLD sequencing projects | 84 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.21 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (76.364 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (10.000 % of family members) |
Environment Ontology (ENVO) | Unclassified (48.182 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (65.455 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Fibrous | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 18.02% β-sheet: 0.00% Coil/Unstructured: 81.98% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.21 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 110 Family Scaffolds |
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PF01584 | CheW | 49.09 |
PF00072 | Response_reg | 15.45 |
PF00585 | Thr_dehydrat_C | 2.73 |
PF13675 | PilJ | 0.91 |
PF00701 | DHDPS | 0.91 |
COG ID | Name | Functional Category | % Frequency in 110 Family Scaffolds |
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COG1171 | Threonine deaminase | Amino acid transport and metabolism [E] | 2.73 |
COG0329 | 4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase | Cell wall/membrane/envelope biogenesis [M] | 1.82 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 76.36 % |
Unclassified | root | N/A | 23.64 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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2199352024|deeps_contig75113.45298 | Not Available | 517 | Open in IMG/M |
3300002074|JGI24748J21848_1021935 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 772 | Open in IMG/M |
3300002077|JGI24744J21845_10018956 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Azospira | 1362 | Open in IMG/M |
3300003371|JGI26145J50221_1005016 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1083 | Open in IMG/M |
3300004016|Ga0058689_10047287 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 789 | Open in IMG/M |
3300004114|Ga0062593_103106106 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 531 | Open in IMG/M |
3300004463|Ga0063356_103460730 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 680 | Open in IMG/M |
3300004463|Ga0063356_104476024 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 601 | Open in IMG/M |
3300004479|Ga0062595_100947919 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 732 | Open in IMG/M |
3300005294|Ga0065705_10929126 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 567 | Open in IMG/M |
3300005329|Ga0070683_101164435 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 741 | Open in IMG/M |
3300005334|Ga0068869_101391905 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 621 | Open in IMG/M |
3300005335|Ga0070666_10166960 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1540 | Open in IMG/M |
3300005336|Ga0070680_100072408 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 2832 | Open in IMG/M |
3300005339|Ga0070660_100705083 | All Organisms → cellular organisms → Bacteria | 846 | Open in IMG/M |
3300005341|Ga0070691_10519140 | Not Available | 691 | Open in IMG/M |
3300005356|Ga0070674_101601221 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 587 | Open in IMG/M |
3300005366|Ga0070659_100616996 | All Organisms → cellular organisms → Bacteria | 933 | Open in IMG/M |
3300005437|Ga0070710_10862195 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 651 | Open in IMG/M |
3300005439|Ga0070711_100170779 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1657 | Open in IMG/M |
3300005455|Ga0070663_100418151 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1099 | Open in IMG/M |
3300005455|Ga0070663_100492414 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1017 | Open in IMG/M |
3300005455|Ga0070663_101214563 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 663 | Open in IMG/M |
3300005529|Ga0070741_11570680 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp. | 540 | Open in IMG/M |
3300005535|Ga0070684_100392302 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales | 1279 | Open in IMG/M |
3300005535|Ga0070684_101266832 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 694 | Open in IMG/M |
3300005539|Ga0068853_101505953 | All Organisms → cellular organisms → Bacteria | 651 | Open in IMG/M |
3300005547|Ga0070693_101386004 | Not Available | 546 | Open in IMG/M |
3300005549|Ga0070704_102136105 | Not Available | 520 | Open in IMG/M |
3300005578|Ga0068854_101464739 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 619 | Open in IMG/M |
3300005616|Ga0068852_101891891 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 619 | Open in IMG/M |
3300005618|Ga0068864_100638304 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1036 | Open in IMG/M |
3300005719|Ga0068861_102400403 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 530 | Open in IMG/M |
3300005874|Ga0075288_1020034 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 940 | Open in IMG/M |
3300005876|Ga0075300_1051078 | Not Available | 596 | Open in IMG/M |
3300006237|Ga0097621_100816866 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 864 | Open in IMG/M |
3300006854|Ga0075425_102695956 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 548 | Open in IMG/M |
3300006871|Ga0075434_102030203 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 580 | Open in IMG/M |
3300006954|Ga0079219_10188197 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1154 | Open in IMG/M |
3300009098|Ga0105245_10359133 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales | 1445 | Open in IMG/M |
3300009545|Ga0105237_10679119 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 1037 | Open in IMG/M |
3300009545|Ga0105237_12202976 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 561 | Open in IMG/M |
3300009553|Ga0105249_10216100 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1884 | Open in IMG/M |
3300010371|Ga0134125_12114558 | Not Available | 612 | Open in IMG/M |
3300010396|Ga0134126_10383510 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1634 | Open in IMG/M |
3300010401|Ga0134121_11141420 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 775 | Open in IMG/M |
3300012212|Ga0150985_121134227 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 767 | Open in IMG/M |
3300012489|Ga0157349_1047471 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 501 | Open in IMG/M |
3300012503|Ga0157313_1044521 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 557 | Open in IMG/M |
3300012900|Ga0157292_10179627 | Not Available | 694 | Open in IMG/M |
3300012913|Ga0157298_10257041 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 595 | Open in IMG/M |
3300012955|Ga0164298_11426395 | Not Available | 537 | Open in IMG/M |
3300012984|Ga0164309_10803449 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 757 | Open in IMG/M |
3300012987|Ga0164307_10686436 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 800 | Open in IMG/M |
3300012988|Ga0164306_10269943 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1228 | Open in IMG/M |
3300012989|Ga0164305_11535520 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 592 | Open in IMG/M |
3300013102|Ga0157371_10633798 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 797 | Open in IMG/M |
3300013104|Ga0157370_10713926 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 915 | Open in IMG/M |
3300013104|Ga0157370_11232515 | Not Available | 675 | Open in IMG/M |
3300013105|Ga0157369_10293955 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1691 | Open in IMG/M |
3300013307|Ga0157372_11029352 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 953 | Open in IMG/M |
3300013307|Ga0157372_12129222 | Not Available | 644 | Open in IMG/M |
3300013307|Ga0157372_12223268 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 630 | Open in IMG/M |
3300015372|Ga0132256_100846960 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1030 | Open in IMG/M |
3300017792|Ga0163161_10645054 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 877 | Open in IMG/M |
3300017994|Ga0187822_10396876 | Not Available | 508 | Open in IMG/M |
3300020081|Ga0206354_11212217 | Not Available | 556 | Open in IMG/M |
3300025903|Ga0207680_10645145 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 758 | Open in IMG/M |
3300025906|Ga0207699_10238792 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1248 | Open in IMG/M |
3300025906|Ga0207699_11411534 | Not Available | 515 | Open in IMG/M |
3300025909|Ga0207705_10277900 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1281 | Open in IMG/M |
3300025916|Ga0207663_10083369 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 2100 | Open in IMG/M |
3300025919|Ga0207657_10012915 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 8212 | Open in IMG/M |
3300025921|Ga0207652_11254350 | Not Available | 643 | Open in IMG/M |
3300025921|Ga0207652_11450718 | Not Available | 590 | Open in IMG/M |
3300025921|Ga0207652_11847975 | Not Available | 509 | Open in IMG/M |
3300025924|Ga0207694_10936111 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 733 | Open in IMG/M |
3300025932|Ga0207690_10372852 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1132 | Open in IMG/M |
3300025932|Ga0207690_10718753 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 822 | Open in IMG/M |
3300025937|Ga0207669_11270595 | Not Available | 625 | Open in IMG/M |
3300025940|Ga0207691_10857149 | Not Available | 762 | Open in IMG/M |
3300025940|Ga0207691_11611052 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 528 | Open in IMG/M |
3300025949|Ga0207667_11993000 | Not Available | 541 | Open in IMG/M |
3300025961|Ga0207712_11052535 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 723 | Open in IMG/M |
3300025972|Ga0207668_11610823 | Not Available | 586 | Open in IMG/M |
3300025986|Ga0207658_11191577 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 696 | Open in IMG/M |
3300026067|Ga0207678_11319623 | Not Available | 638 | Open in IMG/M |
3300026095|Ga0207676_12505140 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 512 | Open in IMG/M |
3300026142|Ga0207698_11651112 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 656 | Open in IMG/M |
3300027750|Ga0209461_10093312 | Not Available | 674 | Open in IMG/M |
3300027787|Ga0209074_10095383 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales | 997 | Open in IMG/M |
3300028381|Ga0268264_12176963 | Not Available | 562 | Open in IMG/M |
3300028597|Ga0247820_10435900 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 883 | Open in IMG/M |
3300028597|Ga0247820_11385099 | Not Available | 512 | Open in IMG/M |
3300031226|Ga0307497_10457586 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 622 | Open in IMG/M |
3300031858|Ga0310892_10349461 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 948 | Open in IMG/M |
3300031858|Ga0310892_10566477 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 765 | Open in IMG/M |
3300031903|Ga0307407_10637864 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 797 | Open in IMG/M |
3300031938|Ga0308175_101908012 | Not Available | 666 | Open in IMG/M |
3300031939|Ga0308174_10059253 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 2617 | Open in IMG/M |
3300031943|Ga0310885_10146291 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae | 1126 | Open in IMG/M |
3300031996|Ga0308176_10556219 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales | 1173 | Open in IMG/M |
3300032003|Ga0310897_10111901 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1101 | Open in IMG/M |
3300032211|Ga0310896_10340414 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 786 | Open in IMG/M |
3300032421|Ga0310812_10171602 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 931 | Open in IMG/M |
3300033412|Ga0310810_10363029 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1516 | Open in IMG/M |
3300033475|Ga0310811_10952883 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 762 | Open in IMG/M |
3300033480|Ga0316620_10244467 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1532 | Open in IMG/M |
3300034819|Ga0373958_0042088 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 937 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 10.00% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 9.09% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 9.09% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 7.27% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 7.27% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 6.36% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 4.55% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 3.64% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 3.64% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 3.64% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 2.73% |
Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 2.73% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 2.73% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 1.82% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 1.82% |
Rice Paddy Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil | 1.82% |
Corn, Switchgrass And Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 1.82% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 1.82% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.82% |
Agave | Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave | 1.82% |
Freshwater Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment | 0.91% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.91% |
Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 0.91% |
Unplanted Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil | 0.91% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.91% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 0.91% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 0.91% |
Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere | 0.91% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 0.91% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere | 0.91% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.91% |
Miscanthus Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere | 0.91% |
Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 0.91% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.91% |
Rhizosphere Soil | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil | 0.91% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 0.91% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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2199352024 | Bare-fallow DEEP SOIL | Environmental | Open in IMG/M |
3300002074 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 | Host-Associated | Open in IMG/M |
3300002077 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 | Host-Associated | Open in IMG/M |
3300003371 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM | Host-Associated | Open in IMG/M |
3300004016 | Agave microbial communities from Guanajuato, Mexico - As.Ma.rz | Host-Associated | Open in IMG/M |
3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
3300005294 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil | Environmental | Open in IMG/M |
3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Environmental | Open in IMG/M |
3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Host-Associated | Open in IMG/M |
3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Host-Associated | Open in IMG/M |
3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Environmental | Open in IMG/M |
3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Host-Associated | Open in IMG/M |
3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Environmental | Open in IMG/M |
3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Host-Associated | Open in IMG/M |
3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Host-Associated | Open in IMG/M |
3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Environmental | Open in IMG/M |
3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Environmental | Open in IMG/M |
3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Host-Associated | Open in IMG/M |
3300005529 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1 | Environmental | Open in IMG/M |
3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Environmental | Open in IMG/M |
3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Host-Associated | Open in IMG/M |
3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Environmental | Open in IMG/M |
3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Environmental | Open in IMG/M |
3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Host-Associated | Open in IMG/M |
3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Host-Associated | Open in IMG/M |
3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Host-Associated | Open in IMG/M |
3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Host-Associated | Open in IMG/M |
3300005874 | Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404 | Environmental | Open in IMG/M |
3300005876 | Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_401 | Environmental | Open in IMG/M |
3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) | Host-Associated | Open in IMG/M |
3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
3300006871 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Host-Associated | Open in IMG/M |
3300006954 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control | Environmental | Open in IMG/M |
3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Host-Associated | Open in IMG/M |
3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Host-Associated | Open in IMG/M |
3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
3300010371 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1 | Environmental | Open in IMG/M |
3300010396 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2 | Environmental | Open in IMG/M |
3300010401 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1 | Environmental | Open in IMG/M |
3300012212 | Combined assembly of Hopland grassland soil | Host-Associated | Open in IMG/M |
3300012489 | Unplanted soil (control) microbial communities from North Carolina - M.Soil.5.yng.040610 | Environmental | Open in IMG/M |
3300012503 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.5.old.080610_R | Host-Associated | Open in IMG/M |
3300012900 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1 | Environmental | Open in IMG/M |
3300012913 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2 | Environmental | Open in IMG/M |
3300012955 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG | Environmental | Open in IMG/M |
3300012984 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG | Environmental | Open in IMG/M |
3300012987 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG | Environmental | Open in IMG/M |
3300012988 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG | Environmental | Open in IMG/M |
3300012989 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG | Environmental | Open in IMG/M |
3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Host-Associated | Open in IMG/M |
3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Host-Associated | Open in IMG/M |
3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Host-Associated | Open in IMG/M |
3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Host-Associated | Open in IMG/M |
3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Host-Associated | Open in IMG/M |
3300017994 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2 | Environmental | Open in IMG/M |
3300020081 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) | Environmental | Open in IMG/M |
3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300027750 | Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes) | Host-Associated | Open in IMG/M |
3300027787 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes) | Environmental | Open in IMG/M |
3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300028597 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14 | Environmental | Open in IMG/M |
3300031226 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S | Environmental | Open in IMG/M |
3300031858 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2 | Environmental | Open in IMG/M |
3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Host-Associated | Open in IMG/M |
3300031938 | Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1 | Environmental | Open in IMG/M |
3300031939 | Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2 | Environmental | Open in IMG/M |
3300031943 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2 | Environmental | Open in IMG/M |
3300031996 | Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2 | Environmental | Open in IMG/M |
3300032003 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1 | Environmental | Open in IMG/M |
3300032211 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1 | Environmental | Open in IMG/M |
3300032421 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3 | Environmental | Open in IMG/M |
3300033412 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC | Environmental | Open in IMG/M |
3300033475 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC | Environmental | Open in IMG/M |
3300033480 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B | Environmental | Open in IMG/M |
3300034819 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 | Host-Associated | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
deeps_00532840 | 2199352024 | Soil | MALKMTKLFGGEPHAAENSDFDVPTTQVRMGITSPVGFDPVTSITVAEQLRAASNSAPPPSRLPLIGGLPVVRQFQILGVLTIAFLALAVFMVFL |
JGI24748J21848_10219352 | 3300002074 | Corn, Switchgrass And Miscanthus Rhizosphere | MALKMTRLFGGEPPRAAENMDFEPPTTQVRMGITSSEGYDPLTTMSVMEQLRAASTAAPTPSKTLLIGNLPVVKQFQVLGVLTVMFLILAAFMVYLDNRASNQQSMQ |
JGI24744J21845_100189561 | 3300002077 | Corn, Switchgrass And Miscanthus Rhizosphere | MALKMTRLFGGEPPRAAENMDFEPPTTQVRMGITSSEGYDPLTTMSVMEQLRAASTAAPTPSKTLLIGNLPVVKQFQVLGVLTVMFL |
JGI26145J50221_10050163 | 3300003371 | Arabidopsis Thaliana Rhizosphere | MAMXMARLFGGEARAAENTDFDAPTTQVRMGIHSPEGYDPPSTMSVMDQLRTASNAASAPPKLGLIGNLPVVKQFQILGVLTVAFLALAAFMIYLDNRA |
Ga0058689_100472871 | 3300004016 | Agave | MALKMTKLFGGEPRAAENSDFDVPTTQVRMGITSPVGFDPLTTMGLAQPPRGLGNAPAPSRLALIGRLPVVRQF |
Ga0062593_1031061061 | 3300004114 | Soil | MALKMTRLFGGEPPRAAENMDFEPPTTQVRMGITSSEGYETLTTMSVMEQLRAASTAAPTPSKTLLIGNLPVVKQFQVLGVLTVMFLILAAFMVYLDNRASNQQSMQS |
Ga0063356_1034607301 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MAMKMARLFGGEARAAENTDFDAPTTQVRMGIHSPEGYDPPSTMSVMDQLRTASNAASAPPKLGLIGNLPVVKQFQILGVLTVA |
Ga0063356_1044760241 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MALKMTRLFGGEPPRAAENMDFEPPTTQVRMGITSTDGYDPLTTMSVMEQLRAANTAATPAPAKIPMIGNLPVVKQFQVLG |
Ga0062595_1009479192 | 3300004479 | Soil | MALKMTRLFGGEPPRAAENMDFEPPTTQVRMGITSSEGYETLTTMSVMEQLRAASTAAPTPSKTLLIGNLPVVKQFQVLGVLTVMFLILAAFMVY |
Ga0065705_109291261 | 3300005294 | Switchgrass Rhizosphere | MAMKMARLFGGEARAAENTDFDAPTTQVRMGIHSPEGYDPPSTMSVMDQLRTASNAASAPPKLGLIGNLPVVKQFQILGVLTVAFLALAAFMIYLDNRAATQQ |
Ga0070683_1011644352 | 3300005329 | Corn Rhizosphere | MALKMTKLFGGEAPRAAENMDFEPPTTQVRMGITSSEGYDPLTTMSVMEQLRAASAAPPTPKKMPMIGNLPVVKQFQ |
Ga0068869_1013919051 | 3300005334 | Miscanthus Rhizosphere | MALKMTKLFGGETPRAAENMDFEPPTTQVRMGVTSSEGYDPLTTMSVMEQLRAASAAPPTPTKMPMIGNLPVVKQFQVLGVLT |
Ga0070666_101669604 | 3300005335 | Switchgrass Rhizosphere | MALKMAGLFGGEPRVAAENSDFEPPTTQVRMGIRSPDGYDPLSTVSVMEQLRTASNAASAPPKLAVIGNLPVVKQFQ |
Ga0070680_1000724081 | 3300005336 | Corn Rhizosphere | MALKMTKLFGGEPHAAENSDFDVPTTQVRMGITSPVGFDPVTSITVAEQLRAASNSAPPPSR |
Ga0070660_1007050832 | 3300005339 | Corn Rhizosphere | MALKMTKLFGGEGRAAENTEFDAPTTQVRMGITSPAGFDPLTTMSAGDSLRSASNSPPTASKLLLIGNLPVVRQFQVLGVLTAAFLALAIIMVLLDNRAVTQQSLHTSA |
Ga0070691_105191402 | 3300005341 | Corn, Switchgrass And Miscanthus Rhizosphere | MALKMTKLFGGEPHAAENSDFDVPTTQVRMGITSPVGFDPVTSITVAEQLRAASNSAPPPSRLPLIGGLPVVRQFQILGVLTTAFVALAVSMVYADNRATSQQALHSSAAT |
Ga0070674_1016012212 | 3300005356 | Miscanthus Rhizosphere | MALKMAGLFGGEPRVAAENSDFEPPTTQVRMGIRSPDGYDPLSTVSVMEQLRTASNAASAPPKLAVIGNLPVVKQFQILGVLTVAFLALAAFMVYLDNRAAN |
Ga0070659_1006169963 | 3300005366 | Corn Rhizosphere | MALKMTKLFGGEPRAAQNSDFDVPTTQVRMGITSPDGFDPLTSMSIGDGLRTASNAPPPSSKLVLIGGLPVVRQFQ |
Ga0070710_108621951 | 3300005437 | Corn, Switchgrass And Miscanthus Rhizosphere | MALKMARLFGAEPRGAENTDFDVPTTQVRMGITSPEGYDALPTISVMEQLRTASNAPAARPKLGLIGNLPVVKQ |
Ga0070711_1001707794 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | MALKMTRLFGGEPRAAENTDFDVPTTQVRMGITSPEGYDPLTSMSVMEQLRTASNAAPAPSKLLMIGNLPVVRQFQVLGVLAVALLTLAAFMLFLDNRATSQQSLQSGTATEMQM |
Ga0070663_1004181513 | 3300005455 | Corn Rhizosphere | MALKMTKLFGGEPRAENADFDVPTTQVRMGITSPVGFDPLTTMGVSEPVRSASNSGPAPSRLPFIGKLPVVRQFQI |
Ga0070663_1004924141 | 3300005455 | Corn Rhizosphere | MALKMAGLFGGEPRVAAENTDFEPPTTQVRMGIRSPDGFDPLSTVSVMEQLRTASNAASAPPKLAMIGNLPVVKQFQILGVLTV |
Ga0070663_1012145632 | 3300005455 | Corn Rhizosphere | MALKMTRLFGGEPPRAAENMDFEPPTTQVRMGITSTDGYDPLTTMSVMEQLRAASTAATPAPAKIPMIGNLPVVKQFQVLGVLTVILLVLAAFMVYLDNRASNQQ |
Ga0070741_115706801 | 3300005529 | Surface Soil | MALKMTRLFGGEPRPADNVDFDAPTTQVRMGITSPEGFDPLASMSVMDQVRSASNSPARAPAKLRVIGNLPVVRQFQILGVLTIAFLALAIAMVFLDSRATSQQA |
Ga0070684_1003923023 | 3300005535 | Corn Rhizosphere | MALKMTRLFGGEPPRAAENMDFEPPTTQVRMGITSSEGYETLTTMSVMEQLRAASTAAPTPSKTLLIGNL |
Ga0070684_1012668322 | 3300005535 | Corn Rhizosphere | MALKMTRLFGGEPPRAAENSDFEPPTTQVRMGITSPEGYDPLTTMSVMEQLRTAASAAAPAPAASKIPIIGNL |
Ga0070684_1019527092 | 3300005535 | Corn Rhizosphere | MALKMTKLFGGEPRAENADFDVPTTQVRMGITSPVGFDPLTTMGVSEPVRSASNSGPAPS |
Ga0068853_1015059532 | 3300005539 | Corn Rhizosphere | MALKMTKLFGGEPRAAQNSDFDVPTTQVRMGITSPDGFDPLTSMSIGDGLRTASNAPPPSSKLVLIGGLPVVRQFQILGVLTVAFLALAVFMV |
Ga0070693_1013860041 | 3300005547 | Corn, Switchgrass And Miscanthus Rhizosphere | MALKMTKLFGGEPHAAENSDFDVPTTQVRMGITSPVGFDPVTSITVAQQLRAASNSAPPPSRLPLIGGLPVVRQFQILGVLTTAFVALAVSMVYADNRATSQQALHSSAATEMQM |
Ga0070704_1021361052 | 3300005549 | Corn, Switchgrass And Miscanthus Rhizosphere | MALKMTKLFGGEPHAAENSDFDVPTTQVRMGITSPVGFDPLTTMGVSEPVRSASNSGPAPSRLPFIGKLPVVRQFQILGVLTAAFVTIA |
Ga0068854_1014647392 | 3300005578 | Corn Rhizosphere | MALKMTRLFGGEPPRAAENTDFEPPTTQVRMGITSAEGYDPLTTMSVMEQLRTAAAAAAPTPSKMPIIGNLPVVKQFQVLGVLTIMFLVLAAFMMYLDNRASTQQSMQ |
Ga0068852_1018918911 | 3300005616 | Corn Rhizosphere | MALKMARLFGGEPRAAENTDFDVPTTQVRMGITSPEGYDTPPTLSVMEQLRIASNAPATRPKLGLIGNLPVVKQFQILGVLTVAFLALAAFM |
Ga0068864_1006383041 | 3300005618 | Switchgrass Rhizosphere | MALKMARLFGGEPRAAENTDFDVPTTQVRMGITSPEGYDTPPTLSVMEQLRTASNAPATRPKLGLIGNLPVVKQFQILGVLTVAFLALAAF |
Ga0068861_1024004031 | 3300005719 | Switchgrass Rhizosphere | MALKMAGLFGGEPRVAAENSDFEPPTTQVRMGIRSPDGYDPLSTVSVMEQLRTASNAASAPPKLAVIGNLPVVKQFQILGVLTVAFLALAAFMVYLDNRAANQQSMQ |
Ga0075288_10200341 | 3300005874 | Rice Paddy Soil | MALKMTKLFGETRTAENTDFDVPTTQVRMNITSPEGFDPLASMSVMEQLRTASNSPPPPRLPIIGRL |
Ga0075300_10510781 | 3300005876 | Rice Paddy Soil | MALKMTKLFGGEPRAENAEFDAPTTQVRMGITSPEGFDPLTTMSVMEQLRTASNSAPAPSRLLMIGNLPVVR |
Ga0097621_1008168661 | 3300006237 | Miscanthus Rhizosphere | MALKMTKLFGGETPRTAENMDFEAPTTQVRMGITSSEGYEPQTTMSVMEQLRAASAAPPAPTKMPVIGNLPVVKQFQVLGVLTVMFLVLAAFMVY |
Ga0075425_1026959561 | 3300006854 | Populus Rhizosphere | MALKMTRLFGGEPPRAAENMDFEPPTTQVRMGITSSEGYETLTTMSVMEQLRAASTAATPAPAKIPMIGNLPVV |
Ga0075434_1020302031 | 3300006871 | Populus Rhizosphere | MALKMTRLFGGEPPRAAENMDFEPPTTQVRMGITSSEGYDPLTTMSVMEQLRAASTAAPTPSKTLLIGNLPVVK |
Ga0079219_101881971 | 3300006954 | Agricultural Soil | MALKMTKLFGGETPRTAENMDFEAPTTQVRMGITSSEGYEPQTTMSVMEQLRAASAAPPTPTKMPVIGNLPVVKQFQVLGVLTVTFLV |
Ga0105245_103591331 | 3300009098 | Miscanthus Rhizosphere | MALKMTRLFGGEPPRAAENMDFEPPTTQVRMGITSSEGYDPLTTMSVMEQLRAASTAAPTPSKTLLIGNLPVVKQFQVLGVLTILFLVLAAFMVYLDNRASTQQSM |
Ga0105237_106791191 | 3300009545 | Corn Rhizosphere | MALKMTKLFGPEPRAAENSDFDVPTTQVRMGITSPEGFDPLTSMSVMEQLRTASNAPPAPSKLLVIGSLPVVRQFQILGVLTIAFLALAVFMVYLDNRAASQ* |
Ga0105237_122029761 | 3300009545 | Corn Rhizosphere | MAMALKMAKLFGNDPRAENVDFEIPTTQVRMGIRSPETIDPLTTMPSLDAMRTASNSASPPSRVALIGGLPVVRQFQVLGVLTIAFIALAVLMVFLDNRATSQQAMQA |
Ga0105249_102161001 | 3300009553 | Switchgrass Rhizosphere | MALKMTRLFGGEPPRAAENMDFEPPTTQVRMGITSSEGYDPLTTMSVMEQLRAASTAAPTPSKTLLIGNLPVVKQFQVLGVLTVMFLILAAFMVYLDNRASNQQSMQSSI |
Ga0134125_121145581 | 3300010371 | Terrestrial Soil | MALKMTKLFGGEPHAAENSDFDVPTTQVRMGITSPVGFDPVTSITVAEQLRAASNSAPPPSRLPLIGGLPVVRQF |
Ga0134126_103835104 | 3300010396 | Terrestrial Soil | MAVKMTKLFGGEGRAAENSDFDAPTTQVRMTITSPAGFDPLTTVSAGESLSRASNSPPSASKLPLIGDLPAVRQFQVLGVLTAAFLALAIIMVLLDNRAVTQQSLH |
Ga0134121_111414202 | 3300010401 | Terrestrial Soil | MALKMAGLFGGEPRVAAENSDFEPPTTQVRMGIRSPDGYDPLSTVSVMEQLRTASNAASAPPKLAVIGNLPVVKQFQILGVLTVAFLALAA |
Ga0150985_1211342271 | 3300012212 | Avena Fatua Rhizosphere | MALKMTRLFGGEPPRAAENTDFEPPTTQVRMGLTSAEGYDPLTTMSVMEQLRTAAAVAAAPTPSKMPIIGNLSVVKQFQVLGV |
Ga0157349_10474712 | 3300012489 | Unplanted Soil | MALKMTRLFGGEPPRAAENMDFEPPTTQVRMGITSPEGYDPLSTLSVMEQLRTASNVAAAPSRLFIIGNLPAVKQFQILGVLTVAFLALAAFMVFLDNRATTQQSTQASI |
Ga0157313_10445211 | 3300012503 | Arabidopsis Rhizosphere | MALKMTRLFGGEPPRAAENMDFEPPTTQVRMGITSSAGYDPMTTMSVMEQLRAASATAAPAPSKVPMIGN |
Ga0157292_101796272 | 3300012900 | Soil | MALKMAGLFGGEPRVAAENTDFEPPTTQVRMGIRSPEGFDPLSTVSVMEQLRTASNAASAPPKLAMIGNLPVVKQFQILGVLTVAFLALAAFMVYLD |
Ga0157298_102570412 | 3300012913 | Soil | MALKMTRLFGGEPPRAAENMDFEPPTTQVRMGITSSEGYETLTTMSVMEQLRAASTAAPTPSKTLLIGNLPVVKQFQVLG |
Ga0164298_114263951 | 3300012955 | Soil | MALKMTKLFGPEPRAAENSDFDVPTTQVRMGITSPEGFDPLTSMSVMEQLRTASNAPPTPSRLLVIGSLPVVRQFQILGVLTFAFLALAVFMVYL |
Ga0164309_108034492 | 3300012984 | Soil | MALKMTRLFGGEPPRAAENMDFEPPTTQVRMGITSSAGYDPMTTMSVMEQLRAASATAAPAPSKVPMIGNLPVVKQFQVLGVLTVMFLVLAAFMVYLDNRASTQQSMQ |
Ga0164307_106864362 | 3300012987 | Soil | MALKMTRLFGGEPPRAAENMDFEPPTTQVRMGITSSEGYDPLTTMSVMEQLRAASTAAPTPSKTLLIGNLPVVKQFQVLGVLTVMFLILAAFMVYLDNRA |
Ga0164306_102699431 | 3300012988 | Soil | MALKMTRLFGGEPPRAAENTDFEPPTTQVRMGITSAEGYDPLTTMSVMEQLRTAAAAAAPSPSKMPIIGNLPVVKQFQVLGVLT |
Ga0164305_115355201 | 3300012989 | Soil | MALKMTRLFGGEPRAAENTDFDVPTTQVRMGITSPEGYDPLTSMSVMEQLRTASNAAPAPSKLLMIGNLPVVRQFQVLGVLAVALLTLAAFMLFLD |
Ga0157371_106337981 | 3300013102 | Corn Rhizosphere | MALKMTKLFGGETPRTAENMDFEAPTTQVRMGITSSEGYEPQTTMSVMEQLRAASAAPPAPTKMPVIGNLPVVKQFQVLGVLTVTFLVLVACMVYLDKLASTQQSMQGSSAAEMQGLLQRVARGAALAAQ |
Ga0157370_107139261 | 3300013104 | Corn Rhizosphere | MALKMTKLFGGEPRAENADFDVPTTQVRMGITSPVGFDPLTTMGVGEPVRSASNSGPAPSRLPLIGKLPVVR |
Ga0157370_112325152 | 3300013104 | Corn Rhizosphere | MALKMTKLFGSEPRMAENADFDVPTTQVRMGITSPVGFDPLTTMGVGEPLNRASNNGHPPSRLPLIGKSPVVRQFQILGVLTAAFVAIAVFMVYLDNRAAAQRALHSSAATEM |
Ga0157369_102939551 | 3300013105 | Corn Rhizosphere | MALKMTKLFGGETPRTAENMDFEAPTTQVRMGITSSEGYEPQTTMSVMEQLRAASAAPPAPTKMPVIGNLPVVKQFQVLGV |
Ga0157372_110293521 | 3300013307 | Corn Rhizosphere | MALKMTKLFGGEGRAAENTEFDAPTTQVRMGITSPAGFDPLTTMSAGDSLRSASNSPPTASKLLLIGNLPVVRQFQVLGVLTAAFLALAIIMVLLDNRAVTQQSLHTS |
Ga0157372_121292221 | 3300013307 | Corn Rhizosphere | MRDIGGTMALKNRLFGAEPRTAENSDFDVPTTQVRMGITSPEGFDSLTSMTVMEQLRTASNSAPAPSRLFA |
Ga0157372_122232681 | 3300013307 | Corn Rhizosphere | MALKMARLFGGEPRAAENTDFDVPTTQVRMGITSPEGYDTPPTLSVMEQLRIASNAPATRPKLGLIGNLPVVKQFQILGVLTVAFLAL |
Ga0132256_1008469601 | 3300015372 | Arabidopsis Rhizosphere | MRHIGGTMALKNRLFGAEPRVAENSDFDVPTTQVRMGITSPEGFDPLTSMSVMEQLRTANTSTPPPSRL |
Ga0163161_106450542 | 3300017792 | Switchgrass Rhizosphere | MALKMTRLFGGEPPRAAENMDFEPPTTQVRMGITSSEGYDPLTTMSVMEQLRAASTAAPTPSKTLLIGNLPVVKQFQVLGVLTVMFLILAAFMVYLDN |
Ga0187822_103968761 | 3300017994 | Freshwater Sediment | MALKMTKLFGSEPRMAENADFDVPTTQVRMSITSPVGFDPLTTMGVGEPLRSASNSAPPPSRLPLIGKLP |
Ga0206354_112122172 | 3300020081 | Corn, Switchgrass And Miscanthus Rhizosphere | MALKMTKLFGGEPHAAENTDFDVPTTQVRMGITSPVGFDPVTSITVAEQLRAASNSAPPPSKLPLIGGL |
Ga0207680_106451451 | 3300025903 | Switchgrass Rhizosphere | MALKMAGLFGGEPRVAAENSDFEPPTTQVRMGIRSPDGYDPLSTVSVMEQLRTASNAASAPPKLAVIGNLPVVKQFQILGVLTVAFLALAAFMVYLD |
Ga0207699_102387921 | 3300025906 | Corn, Switchgrass And Miscanthus Rhizosphere | MALKMTRLFGGEPPRAAENSDFEPPTTQVRMGITSPEGYDPLTTMSVMEQLRTAASAAAPAASKIPIIGNL |
Ga0207699_114115342 | 3300025906 | Corn, Switchgrass And Miscanthus Rhizosphere | MALKMTKLFGGEPRAENADFDVPTTQVRMGITSPVGFDPLTTMGVGEPVRSASNSGPAPSRLPLIGKLP |
Ga0207705_102779003 | 3300025909 | Corn Rhizosphere | MALKMTKLFGGEPHAAENSDFDVPTTQVRMGITSPVGFDPVTSITVAEQLRAASNSAPPPSRLPLIGGLPVVRQFQILGVLTTAFVALAVSMVYADNRATSQQAL |
Ga0207663_100833691 | 3300025916 | Corn, Switchgrass And Miscanthus Rhizosphere | MALKMTKLFGPEPRAAENSDFDVPTTQVRMGITSPEGFDPLTSMSVMEQLRTASNAPPAPSKLIVIGSLPVVRQFQI |
Ga0207657_100129151 | 3300025919 | Corn Rhizosphere | MALKMTRLFGGEPPRAAENMDFEPPTTQVRMGITSSEGYDPLTTMSVMEQLRAASTAAPTPSKTLLIGNLPVVKQFQVLGVLT |
Ga0207652_112543502 | 3300025921 | Corn Rhizosphere | MALKMTKLFGGEGRAAENTEFDAPTTQVRMGITSPAGFDPLTTMSAGDSLRSASNSPPTASKLLLIG |
Ga0207652_114507181 | 3300025921 | Corn Rhizosphere | MALKMTKLFGGETPRTAENMDFEAPTTQVRMGITSSEGYEPQTTMSVMEQLRAASAAPPAPTKMPVIGNLPVVKQFQVLGVLTVTFLVLAAFMVYLDNRASTQQSMQGSIATEMQM |
Ga0207652_118479751 | 3300025921 | Corn Rhizosphere | MALKMAGLFGGEPRVAAENSDFEPPTTQVRMGIRSPDGYDPLSTVSVMEQLRTASNAASAPPKLAVIGNLPVVKQFQILGVLTVA |
Ga0207694_109361111 | 3300025924 | Corn Rhizosphere | MALKMARLFGGEPRAAENTDFDVPTTQVRMGITSPEGYDTPPTLSVMEQLRTASNAPATRPKLGLIGNLPVVKQFQIL |
Ga0207690_103728523 | 3300025932 | Corn Rhizosphere | MALKMARLFGGEPRAAENTDFDVPTTQVRMGITSPEGYDTPPTLSVMEQLRTASNAPATRPKLGLIGNLPVVKQFQILGVLTVAFLALAAFMVYLDNRAANQQSTQSSIA |
Ga0207690_107187531 | 3300025932 | Corn Rhizosphere | MALKMTKLFGGEPRAENMDFDAPTTQVRMGISSPEGFDPLTSLSVGEPARAASNAAAPPSKLLLIGKLPVVRQFQVLG |
Ga0207669_112705951 | 3300025937 | Miscanthus Rhizosphere | MALKMAGLFGGEPRVAAENSDFEPPTTQVRMGIRSPDGYDPLSTVSVMEQLRTASNAASAPPKLAVIGNLPVVKQFQILGVLTVAFLALAAFMVYLDN |
Ga0207691_108571493 | 3300025940 | Miscanthus Rhizosphere | MALKMAGLFGGEPRVAAENSDFEPPTTQVRMGIRSPDGYDPLSTVSVMEQLRTASNAASAPPKLAVIGNLPVV |
Ga0207691_116110521 | 3300025940 | Miscanthus Rhizosphere | MALKMTRLFGGEPPRAAENTDFEPPTTQVRMGITSSGGYDPLTTMSVMEQLRTAASAAAPAASKIPIIGNLPVVKQFQVLGVLTVMFLVL |
Ga0207667_119930001 | 3300025949 | Corn Rhizosphere | MALKMTKLFGGETPRTAENMDFEAPTTQVRMGITSSEGYEPQTTMSVMEQLRAASAAPPAPTKMPVIGNLPVVKQFQVL |
Ga0207712_110525351 | 3300025961 | Switchgrass Rhizosphere | MALKMARLFGGEPRAAENTDFDVPTTQVRMGITSPEGYDTPPPMSVMEQLRTASNAPATRPKLGLIGN |
Ga0207668_116108231 | 3300025972 | Switchgrass Rhizosphere | MALKMARLFGGEPRAAENTDFDVPTTQVRMGITSPEGYDTPPTMSVMEQLRTASNAPATRPKLGLIGNLPVVKQFQILGVLTVAFLALAAFMVYLD |
Ga0207658_111915772 | 3300025986 | Switchgrass Rhizosphere | MALKMAGLFGGEPRVAAENSDFEPPTTQVRMGIRSPDGYDPLSTVSVMEQLRTASNAASAPPKLAVIGNLPVVKQFQILG |
Ga0207678_113196232 | 3300026067 | Corn Rhizosphere | MALKMTKLFGGEPHAAENSDFDVPTTQVRMGITSPVGFDPVTSITVAEQLRAASNSAPPPSRLPLIGGLPVVRQFQILGVLTTAFVALAVSMV |
Ga0207676_125051402 | 3300026095 | Switchgrass Rhizosphere | MALKMTRLFGGEPPRAAENMDFEPPTTQVRMGITSSEGYETLTTMSVMEQLRAASTAAPTPSKTLLIGNLPVVKQFQVLGVLTVMFLILAAFMVYLDNRASN |
Ga0207698_116511121 | 3300026142 | Corn Rhizosphere | MALKMTRLFGGEPPRAAENMDFEPPTTQVRMGITSSEGYETLTTMSVMEQLRAASTAAPTPSKTLLIGNLPVVKQFQVLGVLTVMFLILAAFMVYLDNRASNQQSMQSS |
Ga0209461_100933122 | 3300027750 | Agave | MALKMTKLFGGEPRAAENSDFDVPTTQVRMGITSPVGFDPLTTMGLAQPPRGLGNAPAPSRLALIGRLPVVRQFQILGVLT |
Ga0209074_100953833 | 3300027787 | Agricultural Soil | MALKMTKLFGGETPRTAENMDFEAPTTQVRMGITSSEGYEPQTTMSVMEQLRAASAAPPTPTKMPVIGNLPVVKQFQVLGVLTVTFLVLAA |
Ga0268264_121769632 | 3300028381 | Switchgrass Rhizosphere | MALKMAGLFGGEPRVAAENSDFEPPTTQVRMGIRSPDGYDPLSTVSVMEQLRTASNAASAPPKLAVIGNLPVVKQFQI |
Ga0247820_104359002 | 3300028597 | Soil | MALKMAGLFGGEPRAAAENTDFEPPTTQVRMGIRSPEGYDTMSTVSVMEQLRTASNAASAPPKLAMIGNLPVVKQFQILGVLTVAFLALAAFMVY |
Ga0247820_113850991 | 3300028597 | Soil | MALKMAGLFGGEPRVAAENSDFEPPTTQVRMGIRSPDGYDPLSTVSVMEQLRTASNAASAPPKLAVIGNLPVVKQFQILGVLTVAFLALAARLSRYTM |
Ga0307497_104575862 | 3300031226 | Soil | MALKMTRLFGGEPPRAAENMDFEPPTTQVRMGITSSEGYDPLTTMSVMEQLRAASTAAPTPSKTLLIGNLPVVKQFQVLGVLTVMFLILAAFMVYLDNRASNQQSMQSSIAT |
Ga0310892_103494611 | 3300031858 | Soil | MALKMTRLFGGEPPRAAENMDFEPPTTQVRMGITSSEGYETLTTMSVMEQLRAASTAAPTPSKTLLIGNLPVVKQFQVLGVLTVMFLILAAFMVYLDNRASNQQSMQSSIATEMQMLSQR |
Ga0310892_105664771 | 3300031858 | Soil | MALKMAGLFGGEPRVAAENSDFEPPTTQVRMGIRSPDGYDPLSTVSVMEQLRTASNAASAPPKLAVIGNLPVVKQFQILGVLTVAFLALAAFMVY |
Ga0307407_106378641 | 3300031903 | Rhizosphere | MALRMARLFGGEPRAAENTDFDVPTTQVRMGITSPEGYDPLTTMPVMQQPRAASNARSPPSRLLIIGRLPAVK |
Ga0308175_1019080121 | 3300031938 | Soil | MALKMTRLFGGEPPRAAENMDFEPPTTQVRMGITSSEAYDPLTTTSVMEQLRAASSAAPAPSKLAVIGNLPVVKQFQVLGVLTV |
Ga0308174_100592531 | 3300031939 | Soil | MALKMTKLFGGEPRAQNTDFDAPTTQVRMNITSPEGFDPLTSMTAGDTLRSASNTPAPSKLLMIGNLPVVRQFQILGVLTTAFV |
Ga0310885_101462911 | 3300031943 | Soil | MALKMAGLFGGEPRAAAENTDFEPPTTQVRMGIRSPEGYDTMSTVSVMEQLRTASNAASAPPKLAMIGNLPVVKQFQILGVLTVAFLALAAFMVYLDNRAANQQSMQG |
Ga0308176_105562191 | 3300031996 | Soil | MALKMTKLFGGEPRAQNTDFDAPTTQVRMNITSPEGFDPLTSMTAGDALRSASNTPAPSKLLMIGNLPVVRQFQILGVLTTAFLALAVFMVYLDNHASSQRALH |
Ga0310897_101119013 | 3300032003 | Soil | MALKMAGLFGGEPRVAAENSDFEPPTTQVRMGIRSPDGYDPLSTVSVMEQLRTASNAASAPPKLAVIGNLPVVKQFQILGVLT |
Ga0310896_103404141 | 3300032211 | Soil | MALKMAGLFGGEPRVAAENSDFEPPTTQVRMGIRSPDGYDPLSTVSVMEQLRTASNAASAPPKLAVIGNLPVVKQF |
Ga0310812_101716022 | 3300032421 | Soil | MALKNRLFGAEPRTAENSDFDVPTTQVRMGITSPEGFDSLTSMTVMEQLRTASNSAPAPSRLFAIGNLPVVRQFQILGVLTVAFLSLAV |
Ga0310810_103630291 | 3300033412 | Soil | MALKMTKLFGGEPHAAENSDFDVPTTQVRMGITSPVGFDPVTSITVAEQLRAASNSAPPPSRLPLIGGLPVVRQFQILGVLTTAFVALAVSMVYADNRATSQQALHSSAATEMQM |
Ga0310811_109528831 | 3300033475 | Soil | MALKMTRLFGGEPPRAAENSDFEPPTTQVRMGITSPEGYDPLTTMSVMEQLRTAASAAAPAPAASKIPIIGNLPVVKQFQVLGVLTIMFLVLAAFMVYLDNRASTQQSMQ |
Ga0316620_102444671 | 3300033480 | Soil | MALKMTRLFGGEARAENTEFDAPTTQVRMGITSPEGFDPLTSMSVMEQLRTASNSAPAPSRLLMIGNLPVVRQFQILGVVTIA |
Ga0373958_0042088_606_935 | 3300034819 | Rhizosphere Soil | MALKMTRLFGGEPPRAAENMDFEPPTTQVRMGITSSAGYDPMTTMSVMEQLRAASATAAPAPSKVPMIGNLPVVKQFQVLGVLTVMFLVLAAFMVYLDNRASTQQSMQAS |
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