Basic Information | |
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Family ID | F087321 |
Family Type | Metagenome |
Number of Sequences | 110 |
Average Sequence Length | 48 residues |
Representative Sequence | MKLDDVFRIALKHFPLCHVGEDTEGEVVIFTGMMVDENQELREMTNEDIA |
Number of Associated Samples | 73 |
Number of Associated Scaffolds | 110 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 79.09 % |
% of genes near scaffold ends (potentially truncated) | 31.82 % |
% of genes from short scaffolds (< 2000 bps) | 65.45 % |
Associated GOLD sequencing projects | 58 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (43.636 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean (36.364 % of family members) |
Environment Ontology (ENVO) | Unclassified (87.273 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (75.455 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 36.00% β-sheet: 8.00% Coil/Unstructured: 56.00% |
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Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Marine Deep Ocean Seawater Marine Marine Oceanic Marine Marine Marine Seawater Marine Filtered Seawater Seawater Hydrothermal Vent Fluids Diffuse Hydrothermal Vent Deep Subsurface |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
Ga0063038_1030692 | 3300003978 | Diffuse Hydrothermal Vent | MKHEDVFRIAVEHFPLCHVGEDSEGEVIIFTGLISDENQELREMTHEDIA* |
Ga0082015_10438451 | 3300006090 | Marine | MKIDDVFRIALEHFPLCHVGEDTEGEVVIFTGMMVDKNQELREMTHEDID* |
Ga0068470_10331092 | 3300006308 | Marine | MRHEDVFRIAVEHFPLCHVGEDSEGEVIIFTGLISDENQELREMTHEDIA* |
Ga0068471_14127012 | 3300006310 | Marine | MRHEDVFRIAVEHFPLCHVGEDSEGEVIIFTGLISDENQELREMTREDIA* |
Ga0068487_10302333 | 3300006315 | Marine | MTLDDVFRIALKHFPLCHVGEDAEGEVVIFTGMMVDDNQELREMTNEDIA* |
Ga0068487_10337594 | 3300006315 | Marine | MRLDDVFRIALKHFPLCHVGEDVEGEVVIFTGMMVDKNQELREMTDEDIA* |
Ga0068475_11385953 | 3300006318 | Marine | MTLNEVFQIAQEHFPLCHVGEDSEGEVIIFTGMVRNENSMSELREMTDEDIA* |
Ga0068502_10547092 | 3300006336 | Marine | MRHEDVFRIAVEHFPLCHVGEDSEGEVIIFTGLISDENQELREMTREDIT* |
Ga0099956_10458642 | 3300006411 | Marine | MRLDDVFRIALKHFPLCHVGEDIEGEVVIFTGMMVDDNQELREMTDEDIA* |
Ga0098035_11855432 | 3300006738 | Marine | MKHEDVFRIAVEHFPLCHVGEDSEGEVIIFTGLISDENQELREITVEDLD* |
Ga0098040_100019063 | 3300006751 | Marine | MTLDDVFRIALEHFPLCHVGEDTEGEVVIFTGMMVDKNQELREMTHEDID* |
Ga0098044_10089438 | 3300006754 | Marine | MTLDDVFRIALEHFPLCHVGEDTEGEVVIFTGMMVDKNQELREMTHEDLD* |
Ga0066366_100360072 | 3300007283 | Marine | MTLDDVFRIALKHFPLCHVGEDTEGEVVIFTGMMVDDNQELREMTNEDIA* |
Ga0114898_100485314 | 3300008216 | Deep Ocean | DVFRIALKHFPLCHVGEDTEGEVVIFTGMMVDENQELREMTDEDID* |
Ga0114898_10062851 | 3300008216 | Deep Ocean | MKLDDVFRIALKHFPLCHVGEDTEGEVVIFTGMMVDENQELRE |
Ga0114898_10130449 | 3300008216 | Deep Ocean | MKHEDVFKIAIEHFPLCHVGEDSEGEVIIFTGLISDENQELREMTREDIA* |
Ga0114898_10155017 | 3300008216 | Deep Ocean | DVFRIALKHFPLCHVGEDTEGEVVIFTGMMVDENQELREMTNEDIT* |
Ga0114898_10272326 | 3300008216 | Deep Ocean | DVFRIALKHFPLCHVGEDTEGEVVIFTGMMVDENQELREMTHEDIA* |
Ga0114898_10402311 | 3300008216 | Deep Ocean | MTLDDVFRIALKHFPLCHVGEDTEGEVVIFTGMMVDENQELRE |
Ga0114899_10037185 | 3300008217 | Deep Ocean | MTLDDVFRIALKHFPLCHVGEDVEGEVVIFTGMMVDKNQELREMTDEDIA* |
Ga0114899_100615911 | 3300008217 | Deep Ocean | MKLDDVFRIALKHFPLCHVGEDTEGEVVIFTGMMVDENQELREMTDEDID* |
Ga0114899_10249387 | 3300008217 | Deep Ocean | LKHFPLCHVGEDTEGEVVIFTGMMVDENQELREMTHEDIA* |
Ga0114904_100529611 | 3300008218 | Deep Ocean | MKLDDVFRIALKHFPLCHVGEDTEGEVVIFTGMMVDENQELREMT |
Ga0114905_10083925 | 3300008219 | Deep Ocean | MKHEDVFRIAVEHFPLCHVGEDSEGEVIIFTGLISDENQELREMTHEDIT* |
Ga0114905_10126299 | 3300008219 | Deep Ocean | FRIALKHFPLCHVGEDTEGEVVIFTGMMVDENQELREMTHEDIA* |
Ga0114905_10718095 | 3300008219 | Deep Ocean | MTLDDVFRIALKHFPLCHVGEDSEGEVIIFTGLISEENQELREMTNEDIT* |
Ga0114905_10897023 | 3300008219 | Deep Ocean | MKLDDVFRIALKHFPLCHVGEDIEGEVVIFTGMMVDKNQELREMTDEDIA* |
Ga0114996_100933219 | 3300009173 | Marine | MRHEDVFRIAVEHFPLCHVGEDAGGEVIIFTGLVSDENQELREMTHEDIE* |
Ga0118716_11432582 | 3300009370 | Marine | MTLDDVFRIALKHFPLCHVGEDIEGEVVIFTGMMVDDNQELREMTDEDIA* |
Ga0114993_102094681 | 3300009409 | Marine | MKLDDVFRIALKHFPMCHVIEDMEGEVVIFTGLVSDKNQELRDMTHEDIK* |
Ga0114903_11170931 | 3300009412 | Deep Ocean | MNSTRWMSFNRKKPMKHEDVFKIAIEHFPLCHVGEDSEGEVIIFTGLISDENQELREMTREDIA* |
Ga0114903_11374801 | 3300009412 | Deep Ocean | MKLDDVFRIAVEHFPLCHVGEDNGGQVIIFTGMVRDGNTKSELREMTDEDID* |
Ga0114902_10703261 | 3300009413 | Deep Ocean | MTLDDVFRIALKHFPLCHVGEDTEGEVVIFTGMMVDENQELR |
Ga0114908_10537342 | 3300009418 | Deep Ocean | MRHEDVFRIAVEHFPLCHVGEDSEGEVIIFTGLISDENQELREMTNEDIT* |
Ga0114932_102026625 | 3300009481 | Deep Subsurface | LVISTRGHSPDRRSLTLMTLDDVFRIALKHFPLCHVGEDSEGEVVIFTGMMVDKNQELREMTHEDIA* |
Ga0114932_104751732 | 3300009481 | Deep Subsurface | MTLDDVFRIALEHFPLCHVGEDSEGEVIIFTGMVRNENTMSELREMTDEDIA* |
Ga0114900_10294081 | 3300009602 | Deep Ocean | MKLDDVFRIALKHFPLCHVGEDNGGQVIIFTGMVRDGNTKSELREMTDEDID* |
Ga0114900_10487172 | 3300009602 | Deep Ocean | MTLDDVFRIALKHFPLCHVGEDTEGEVVIFTGMMVDENQELREMTDEDID* |
Ga0114911_11406901 | 3300009603 | Deep Ocean | LDDVFRIALKHFPLCHVGEDTEGEVVIFTGMMVDENQELREMTDEDID* |
Ga0105173_10143964 | 3300009622 | Marine Oceanic | MKLDDAFRIALEHFPMCHVGEDSEGEVIIFTGMMVGENQELREMTIEDIT* |
Ga0105173_10255352 | 3300009622 | Marine Oceanic | MKHEDVFKIAVEHFPLCHVGEDAEGEVIIFTGLVSDENQELREMTHEDIE* |
Ga0114933_101016882 | 3300009703 | Deep Subsurface | MTLNEVFQIAQEHFPLCHVGEDSEGEVIIFTGMMVDDNQELREMTHEDIA* |
Ga0115002_100648375 | 3300009706 | Marine | MKHEDVFRIAVEHFPLCHVGEDAGGEVVIFTGLVSDENQELREMTHEDIE* |
Ga0114999_102447581 | 3300009786 | Marine | MKLDDVFRIALKHFPMCHVIEDMEGEVVIFTGLVSDKNQELREMTHEDIA* |
Ga0098047_100879871 | 3300010155 | Marine | RIALEHFPLCHVGEDTEGEVVIFTGMMVDKNQELREMTHEDID* |
Ga0098047_102253543 | 3300010155 | Marine | MTLDDVFRIALEHFPLCHVGEDTEGEVVIFTGMMVDKNQELREMTHED |
Ga0133547_119401912 | 3300010883 | Marine | MKLDDVFRIALKHFPMCHVIEDMEGEVVIFTGLVSD |
Ga0114934_105334451 | 3300011013 | Deep Subsurface | MTLNEVFQIAQEHFPLCHVGEDSEGEVIIFTGMVRNENSMSELREMTDED |
Ga0211502_10631451 | 3300020332 | Marine | HFPLCHVGEDIEGEVVIFTGMMVDDNQELREMTNEDIA |
Ga0211623_102171023 | 3300020399 | Marine | MMKHEDVFRIAVEHFPMCHVGEDSEGEVIIFTGLISDENQELREMTDEDIA |
Ga0211578_101822273 | 3300020444 | Marine | MRHEDVFRIAVEHFPLCHVGEDSEGEVIIFTGLISDENQELREMTHEDIA |
Ga0211691_100062002 | 3300020447 | Marine | MKHEDVFRIAVEHFPMCHVGEDSEGEVIIFTGLISDENQELREMTDEDIA |
Ga0211691_101483022 | 3300020447 | Marine | MRHEDVFRIAVEHFPLCHVGEDSEGEVIIFTGLISDENQELREMTREDIA |
Ga0211643_105203711 | 3300020457 | Marine | MKTLDDVFRIALEYFPLCHVGEDIEGQVVIFTGMMIDDNQELREMTNEDIA |
Ga0211503_100162068 | 3300020478 | Marine | MTLDDVFRIALKHFPLCHVGEDTEGEVVIFTGMMVDDNQELREMTNEDIA |
Ga0206685_101592912 | 3300021442 | Seawater | MKIDDVFRIAVEHFPLCHVIQDQEGEVVIFTGMIVDDNETLREMTREDIA |
Ga0226832_100153044 | 3300021791 | Hydrothermal Vent Fluids | MTLDDVFRIALKHFPLCHVGEDAEGEVVIFTGMMVDDNQELREMTNEDIA |
Ga0226832_100374554 | 3300021791 | Hydrothermal Vent Fluids | MRLDDVFRIALKHFPLCHVGEDVEGEVVIFTGMMVDKNQELREMTDEDIA |
Ga0226832_100471525 | 3300021791 | Hydrothermal Vent Fluids | MRLDDVFRIALKHFPLCHVGEDVEGEVVIFTGMMV |
Ga0209992_100627476 | 3300024344 | Deep Subsurface | MTLNEVFQIAQEHFPLCHVGEDSEGEVIIFTGMMVDDNQELREMTHED |
Ga0209992_102530693 | 3300024344 | Deep Subsurface | SPDRRSLTLMTLDDVFRIALKHFPLCHVGEDSEGEVVIFTGMMVDKNQELREMTHEDIA |
Ga0209992_104164732 | 3300024344 | Deep Subsurface | MTLDDVFRIALEHFPLCHVGEDSEGEVIIFTGMVRNENTMSELREMTDEDIA |
Ga0207901_10172432 | 3300025045 | Marine | MRHEDVFRIAVEHFPLCHVGEDAEGEVVIFTGLVSDENQELREMTHEDIK |
Ga0208011_10052978 | 3300025096 | Marine | MTLDDVFRIALEHFPLCHVGEDTEGEVVIFTGMMVDKNQELREMTHEDID |
Ga0208790_10696792 | 3300025118 | Marine | MTLDDVFRIALEHFPLCHVGEDTEGEVVIFTGMMVDKNQELREMTHEDLD |
Ga0208919_11200453 | 3300025128 | Marine | LKHFPLCHVGEDVEGEVVIFTGMMVDKNQELREMTDEDIA |
Ga0208182_10022681 | 3300025251 | Deep Ocean | MTLDDVFRIALKHFPLCHVGEDTEGEVVIFTGMMVDENQELREM |
Ga0208182_100242210 | 3300025251 | Deep Ocean | MKLDDVFRIALKHFPLCHVGEDTEGEVVIFTGMMVDENQELREMTDEDID |
Ga0208182_10127179 | 3300025251 | Deep Ocean | MKHEDVFKIAIEHFPLCHVGEDSEGEVIIFTGLISDENQELREMTREDIA |
Ga0208182_10135915 | 3300025251 | Deep Ocean | MKHEDVFRIAVEHFPLCHVGEDSEGEVIIFTGLISDENQELREMTHEDIT |
Ga0208182_10186435 | 3300025251 | Deep Ocean | HFPLCHVGEDTEGEVVIFTGMMVDENQELREMTNEDIT |
Ga0208179_100280113 | 3300025267 | Deep Ocean | MKLDDVFRIALKHFPLCHVGEDTEGEVVIFTGMMVDENQELREMTNEDIT |
Ga0208179_10028461 | 3300025267 | Deep Ocean | MTLDDVFRIALKHFPLCHVGEDTEGEVVIFTGMMVDE |
Ga0207894_10228562 | 3300025268 | Deep Ocean | MKIDDVFRIALEHFPLCHVGEDTEGEVVIFTGMMVDKNQELREMTHEDID |
Ga0208813_10066669 | 3300025270 | Deep Ocean | MTLDDVFRIALKHFPLCHVGEDTEGEVVIFTGMMVDENQELREMTNEDIT |
Ga0208449_10042611 | 3300025280 | Deep Ocean | HFPLCHVGEDTEGEVVIFTGMMVDENQELREMTHEDIA |
Ga0208030_10119488 | 3300025282 | Deep Ocean | FPLCHVGEDTEGEVVIFTGMMVDENQELREMTHEDIA |
Ga0208030_10855872 | 3300025282 | Deep Ocean | MRHEDVFRIAVEHFPLCHVGEDSEGEVIIFTGLISDENQELREMTHEDIT |
Ga0208315_100906111 | 3300025286 | Deep Ocean | MTLDDVFRIALKHFPLCHVGEDVEGEVVIFTGMMVDKNQELREMTDEDIA |
Ga0207903_10080884 | 3300025287 | Deep Ocean | MKHEDVFRIAVEHFPLCHVGEDAGGEVIIFTGLVSDDNQELREMTHEDIA |
Ga0207903_10653762 | 3300025287 | Deep Ocean | MKLDDAFRIALEHFPMCHVGEDSEGEVIIFTGMMVGENQELREMTIEDIT |
Ga0208934_10971962 | 3300025293 | Deep Ocean | MKLDDVFRIAVEHFPLCHVGEDSEGEVIIFTGLISDENQELREMTHEDIT |
Ga0208316_10292432 | 3300025296 | Deep Ocean | MTLDDVFRIALKHFPLCHVGEDTEGEVVIFTGMMVDENQELREMTDEDID |
Ga0208684_10026581 | 3300025305 | Deep Ocean | FRIALKHFPLCHVGEDTEGEVVIFTGMMVDENQELREMTHEDIA |
Ga0208684_10265691 | 3300025305 | Deep Ocean | LKHFPLCHVGEDTEGEVVIFTGMMVDENQELREMTNEDIT |
Ga0209757_100487254 | 3300025873 | Marine | MKIDDVFRIAVGHFPLCHVIQDQEGEVVIFTGMIVDDNETLREITVEDLD |
Ga0209757_102648492 | 3300025873 | Marine | MKHEDVFRIAVEHFPLCHVGEDAEGEVVIFTGLVSDENQEL |
Ga0207966_10834933 | 3300026119 | Marine | MKLDDAFRIALEHFPMCHVGEDSEGEVIIFTGMMVGDNQELREMTIEDIT |
Ga0209034_100931212 | 3300027755 | Marine | MTLNEVFQIAQEHFPLCHVGEDVEGEVVIFTGMMVDKNQELREMTDEDIA |
Ga0209089_101574603 | 3300027838 | Marine | MKHEDVFRIAVEHFPLCHVGEDAGGEVIIFTGLVSDENQELREMTHEDIE |
Ga0209403_101139466 | 3300027839 | Marine | MKHEDVFRIAVEHFPLCHVGEDAGGEVVIFTGLVSDENQELREMTHEDIE |
Ga0209402_101682431 | 3300027847 | Marine | MKLDDVFRIALKHFPMCHVIEDMEGEVVIFTGLVSDKNQELREMTHEDIA |
Ga0256382_10150004 | 3300028022 | Seawater | MTLDDVFRIALEHFPLCHVGEDTEGEVVIFTGMMVDKNQELREMTHEDIA |
Ga0256382_11679232 | 3300028022 | Seawater | MKLDDVFRIALKHFPLCHVGEDTEGEVVIFTGMMVDENQELREMTNEDIA |
Ga0302132_100002738 | 3300031605 | Marine | MKLDDVFRIALKHFPMCHVIEDMEGEVVIFTGLVSDKNQELRDMTHEDIK |
Ga0302123_100793974 | 3300031623 | Marine | MRHEDVFRIAVEHFPLCHVGEDAGGEVIIFTGLVSDENQELREMTHEDIE |
Ga0310121_102483483 | 3300031801 | Marine | MKLDDVFRIALKHFPMCHVIEDMEGEVVIFTGLVSDKNQELRDMTHEDIA |
Ga0310123_108709091 | 3300031802 | Marine | MKLDDAFRIALEHFPMCHVGEDSEGEVIIFTGMMVGDNQ |
Ga0310124_101690381 | 3300031804 | Marine | RIALKHFPMCHVIEDMEGEVVIFTGLVSDKNQELRDMTHEDIA |
Ga0315318_101327942 | 3300031886 | Seawater | MKIDDVFRIAVEHFPLCHVIQDQEGEVVIFTGMIVDDNETLREMTHEDIT |
Ga0310344_1000139030 | 3300032006 | Seawater | MRLDDVFRIALKHFPLCHVGEDVEGEVVIFTGMMVDK |
Ga0310344_1000332716 | 3300032006 | Seawater | MTLDDVFRIALEHFPLCHVGEDIEGEVVIFTGMMVDENQKLREMTNEDIA |
Ga0310344_100429632 | 3300032006 | Seawater | MTLNEVFQIAQEHFPLCHVGEDSEGEIIIFTGMVRNENSMSELREMTDEDIA |
Ga0310344_110580952 | 3300032006 | Seawater | MTLDDVFRIALKHFPLCHVGEDIEGEVVIFTGMMVDDNQELREMTDEDIA |
Ga0310345_100136311 | 3300032278 | Seawater | RHEDVFRIAVEHFPLCHVGEDSEGEVIIFTGLISDENQELREMTHEDIA |
Ga0310345_102597355 | 3300032278 | Seawater | MRHEDVFRIAVEHFPLCHVGEDSEGEVIIFTGLISDENQEL |
Ga0310345_109534612 | 3300032278 | Seawater | MMKHEDVFRIAVEHFPMCHVGEDSEGEVIIFTGLISDENQELREMTHEDIA |
Ga0310345_112826092 | 3300032278 | Seawater | MRHEDVFRIAVEHFPLCHVGEDSEGEVIIFTGLISDENQELREMTNEDIT |
Ga0310342_1027108412 | 3300032820 | Seawater | MRLDDVFRIALKHFPLCHVGEDAEGEVVIFTGMMVDDNQELREMTNEDIA |
Ga0326741_015325_306_458 | 3300034654 | Filtered Seawater | MTLYEVFRIAQEHFPLCHVGEDCEGEVVIFTGMVLDENKKLREMTHEDIA |
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