NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F087272

Metagenome / Metatranscriptome Family F087272

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F087272
Family Type Metagenome / Metatranscriptome
Number of Sequences 110
Average Sequence Length 60 residues
Representative Sequence DGKSKKPVIAKGTAKSISTATLIIDQGGKFSQANVSTALKKVCEQLIDKLKLK
Number of Associated Samples 101
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 1.96 %
% of genes near scaffold ends (potentially truncated) 43.64 %
% of genes from short scaffolds (< 2000 bps) 40.00 %
Associated GOLD sequencing projects 98
AlphaFold2 3D model prediction Yes
3D model pTM-score0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (84.545 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater
(13.636 % of family members)
Environment Ontology (ENVO) Unclassified
(41.818 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(79.091 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 22.22%    β-sheet: 0.00%    Coil/Unstructured: 77.78%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 110 Family Scaffolds
PF07691PA14 1.82
PF01510Amidase_2 1.82
PF01223Endonuclease_NS 0.91
PF00534Glycos_transf_1 0.91
PF02867Ribonuc_red_lgC 0.91
PF00059Lectin_C 0.91

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 110 Family Scaffolds
COG0209Ribonucleotide reductase alpha subunitNucleotide transport and metabolism [F] 0.91
COG1864DNA/RNA endonuclease G, NUC1Nucleotide transport and metabolism [F] 0.91


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A84.55 %
All OrganismsrootAll Organisms15.45 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003346|JGI26081J50195_1014538All Organisms → Viruses → Predicted Viral1917Open in IMG/M
3300004097|Ga0055584_100780067All Organisms → Viruses → Predicted Viral1000Open in IMG/M
3300006357|Ga0075502_1686793All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium623Open in IMG/M
3300007538|Ga0099851_1117997Not Available1004Open in IMG/M
3300007539|Ga0099849_1292003Not Available590Open in IMG/M
3300007539|Ga0099849_1292546Not Available589Open in IMG/M
3300007862|Ga0105737_1009963All Organisms → Viruses → Predicted Viral2114Open in IMG/M
3300008107|Ga0114340_1014433All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon4250Open in IMG/M
3300008108|Ga0114341_10050751All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon3193Open in IMG/M
3300008448|Ga0114876_1173597Not Available759Open in IMG/M
3300009085|Ga0105103_10610371All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon621Open in IMG/M
3300010296|Ga0129348_1327782Not Available509Open in IMG/M
3300012666|Ga0157498_1047525All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium658Open in IMG/M
3300013195|Ga0116815_1025673Not Available769Open in IMG/M
3300017727|Ga0181401_1116206Not Available670Open in IMG/M
3300017750|Ga0181405_1061045Not Available982Open in IMG/M
3300017757|Ga0181420_1189767Not Available600Open in IMG/M
3300017771|Ga0181425_1190969Not Available645Open in IMG/M
3300017781|Ga0181423_1044732Not Available1776Open in IMG/M
3300017785|Ga0181355_1323776Not Available573Open in IMG/M
3300019784|Ga0181359_1165171Not Available746Open in IMG/M
3300020172|Ga0211729_10799009All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon853Open in IMG/M
3300020205|Ga0211731_11250168Not Available1229Open in IMG/M
3300020377|Ga0211647_10119612Not Available891Open in IMG/M
3300020393|Ga0211618_10234618Not Available621Open in IMG/M
3300020408|Ga0211651_10199008Not Available781Open in IMG/M
3300020437|Ga0211539_10123590Not Available1048Open in IMG/M
3300021368|Ga0213860_10009927All Organisms → Viruses → Predicted Viral3899Open in IMG/M
3300021957|Ga0222717_10000640Not Available29964Open in IMG/M
3300021960|Ga0222715_10300976All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium911Open in IMG/M
3300021962|Ga0222713_10396232All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium851Open in IMG/M
3300022053|Ga0212030_1028002Not Available777Open in IMG/M
3300022058|Ga0224905_102119Not Available544Open in IMG/M
3300022063|Ga0212029_1008004Not Available1245Open in IMG/M
3300023172|Ga0255766_10222140Not Available1013Open in IMG/M
3300024229|Ga0233402_1035997Not Available1062Open in IMG/M
3300024244|Ga0228678_1105764Not Available545Open in IMG/M
3300024266|Ga0228661_1113470Not Available509Open in IMG/M
3300025636|Ga0209136_1171720All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium551Open in IMG/M
3300025674|Ga0208162_1166235Not Available590Open in IMG/M
3300025767|Ga0209137_1086447Not Available1305Open in IMG/M
3300025821|Ga0209600_1102801Not Available852Open in IMG/M
3300026097|Ga0209953_1044924Not Available634Open in IMG/M
3300027506|Ga0208973_1055015Not Available1015Open in IMG/M
3300028280|Ga0228646_1140150Not Available584Open in IMG/M
3300028391|Ga0233394_1027921All Organisms → Viruses → Predicted Viral1474Open in IMG/M
3300028396|Ga0228643_1083094Not Available761Open in IMG/M
3300031758|Ga0315907_10980058All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon612Open in IMG/M
3300031787|Ga0315900_10049763All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon4431Open in IMG/M
3300031963|Ga0315901_10066638All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon3442Open in IMG/M
3300034101|Ga0335027_0896230Not Available504Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater13.64%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous9.09%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine9.09%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine8.18%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh8.18%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater7.27%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine5.45%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water5.45%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton4.55%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake2.73%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater2.73%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater2.73%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine2.73%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.82%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient1.82%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water1.82%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine1.82%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine1.82%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water1.82%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater0.91%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.91%
Freshwater, Surface IceEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Surface Ice0.91%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater0.91%
Marine PlanktonEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Plankton0.91%
MarineEnvironmental → Aquatic → Marine → Inlet → Unclassified → Marine0.91%
Marine Surface WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water0.91%
Macroalgal SurfaceHost-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface0.91%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000949Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY94Host-AssociatedOpen in IMG/M
3300001778Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM18, ROCA_DNA027_0.2um_3gEnvironmentalOpen in IMG/M
3300002483Marine viral communities from the Pacific Ocean - ETNP_6_30EnvironmentalOpen in IMG/M
3300003216Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_59LU_5_DNAEnvironmentalOpen in IMG/M
3300003346Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_74LU_5_DNAEnvironmentalOpen in IMG/M
3300003427Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_116LU_22_DNAEnvironmentalOpen in IMG/M
3300004097Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaGEnvironmentalOpen in IMG/M
3300004279Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10mEnvironmentalOpen in IMG/M
3300006357Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006400Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006404Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006621Marine coastal surface water microbial communities in Port Hacking, Sydney, Australia ? TJ07 time pointEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006921Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaGEnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007708Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02EnvironmentalOpen in IMG/M
3300007862Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373A_0.2umEnvironmentalOpen in IMG/M
3300007992Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2umEnvironmentalOpen in IMG/M
3300008107Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NAEnvironmentalOpen in IMG/M
3300008108Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NAEnvironmentalOpen in IMG/M
3300008113Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NAEnvironmentalOpen in IMG/M
3300008266Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300008267Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTREnvironmentalOpen in IMG/M
3300008448Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigsEnvironmentalOpen in IMG/M
3300009001Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MGEnvironmentalOpen in IMG/M
3300009082Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015EnvironmentalOpen in IMG/M
3300009085Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009086Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713EnvironmentalOpen in IMG/M
3300009438Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506EnvironmentalOpen in IMG/M
3300010296Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNAEnvironmentalOpen in IMG/M
3300010318Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNAEnvironmentalOpen in IMG/M
3300012666Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Surface Ice version 2EnvironmentalOpen in IMG/M
3300013195Marine hypoxic microbial communities from the Gulf of Mexico, USA - 10m_Station7_GOM_MetagenomeEnvironmentalOpen in IMG/M
3300016727Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011510BT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017727Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20EnvironmentalOpen in IMG/M
3300017750Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29EnvironmentalOpen in IMG/M
3300017757Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22EnvironmentalOpen in IMG/M
3300017765Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28EnvironmentalOpen in IMG/M
3300017771Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 48 SPOT_SRF_2013-11-13EnvironmentalOpen in IMG/M
3300017774Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017781Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14EnvironmentalOpen in IMG/M
3300017785Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300017786Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18EnvironmentalOpen in IMG/M
3300018415Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018424Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018428Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019283Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101404CT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019765Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW13Sep16_MGEnvironmentalOpen in IMG/M
3300019784Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300020160Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1EnvironmentalOpen in IMG/M
3300020172Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1EnvironmentalOpen in IMG/M
3300020205Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1EnvironmentalOpen in IMG/M
3300020301Marine microbial communities from Tara Oceans - TARA_B100000925 (ERX556086-ERR598997)EnvironmentalOpen in IMG/M
3300020377Marine microbial communities from Tara Oceans - TARA_B100000927 (ERX556007-ERR599065)EnvironmentalOpen in IMG/M
3300020386Marine microbial communities from Tara Oceans - TARA_B100000609 (ERX555990-ERR599038)EnvironmentalOpen in IMG/M
3300020393Marine microbial communities from Tara Oceans - TARA_B100000161 (ERX556105-ERR599054)EnvironmentalOpen in IMG/M
3300020402Marine microbial communities from Tara Oceans - TARA_B000000609 (ERX555971-ERR599057)EnvironmentalOpen in IMG/M
3300020403Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145)EnvironmentalOpen in IMG/M
3300020408Marine microbial communities from Tara Oceans - TARA_B100000925 (ERX555963-ERR599118)EnvironmentalOpen in IMG/M
3300020437Marine microbial communities from Tara Oceans - TARA_B100000282 (ERX555906-ERR599074)EnvironmentalOpen in IMG/M
3300020471Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX556063-ERR599002)EnvironmentalOpen in IMG/M
3300021335Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO540EnvironmentalOpen in IMG/M
3300021356Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245EnvironmentalOpen in IMG/M
3300021368Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550EnvironmentalOpen in IMG/M
3300021373Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282EnvironmentalOpen in IMG/M
3300021425Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300022053Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022058Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 49 SPOT_SRF_2013-12-23 (v2)EnvironmentalOpen in IMG/M
3300022063Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300023170Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaGEnvironmentalOpen in IMG/M
3300023172Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaGEnvironmentalOpen in IMG/M
3300023709Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501CT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024229Seawater microbial communities from Monterey Bay, California, United States - 54DEnvironmentalOpen in IMG/M
3300024244Seawater microbial communities from Monterey Bay, California, United States - 125D_rEnvironmentalOpen in IMG/M
3300024266Seawater microbial communities from Monterey Bay, California, United States - 75DEnvironmentalOpen in IMG/M
3300025132Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)EnvironmentalOpen in IMG/M
3300025636Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_90LU_22_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025674Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025695Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_116LU_22_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025696Pelagic Microbial community sample from North Sea - COGITO 998_met_02 (SPAdes)EnvironmentalOpen in IMG/M
3300025767Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_105LU_22_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025821Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421 (SPAdes)EnvironmentalOpen in IMG/M
3300026097Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_restored_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300026505Seawater microbial communities from Monterey Bay, California, United States - 59DEnvironmentalOpen in IMG/M
3300027192Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.715 (SPAdes)EnvironmentalOpen in IMG/M
3300027506Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_66_BLW_10 (SPAdes)EnvironmentalOpen in IMG/M
3300028008Seawater microbial communities from Monterey Bay, California, United States - 1D_rEnvironmentalOpen in IMG/M
3300028196Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_10mEnvironmentalOpen in IMG/M
3300028280Seawater microbial communities from Monterey Bay, California, United States - 58DEnvironmentalOpen in IMG/M
3300028391Seawater microbial communities from Monterey Bay, California, United States - 24DEnvironmentalOpen in IMG/M
3300028396Seawater microbial communities from Monterey Bay, California, United States - 55DEnvironmentalOpen in IMG/M
3300031758Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123EnvironmentalOpen in IMG/M
3300031787Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114EnvironmentalOpen in IMG/M
3300031963Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116EnvironmentalOpen in IMG/M
3300034101Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
BBAY94_10001012123300000949Macroalgal SurfaceTIYKNGKKKKSVNAKGTAKSISKSTLVVDQGGTFSQANVSTALKKLCEQLVNKLKL*
ACM18_111856113300001778Marine PlanktonVTAKGTAKSISTATLIIDDGGKFSQAGVSTALKKVCEELIDKLKLLNPQLH*
JGI25132J35274_107947513300002483MarineGELFVNGKKKKSTVAKGTSKEISTATLIIDDGGGFSQAGVSTALKKVCDQIIKKLKL*
JGI25132J35274_110388213300002483MarinePKKAVAKGTAKSISTATLIIDQGGKFSQANVSSAIKKLCEDLIKKLKL*
JGI26079J46598_102008113300003216MarineLTIKGKKKKAVVAKGTAKSISTATLIIDSGGKFSQSDVSTALKKVCEQLIDKLKL*
JGI26081J50195_101453813300003346MarineGKKIDATEIIAKAYLTIKGKKKKAVVAKGTAKSISTATLIIDQGGRFSQSDVSTALKKVCEQLIDKLKL*
JGI26084J50262_101681733300003427MarineYRNGKKKKIVTAQGTAKSISTATLIIDQGGQFSQANVSTAMKKLCEDLIDKLKL*
Ga0055584_10078006723300004097Pelagic MarineTEIVAQAQLIVNGKPKKKVTARGTATSVSTATLIIDEGGKFSQADVSTAMKKVCEQLIKKLKLK*
Ga0066605_1020559213300004279MarineIIARGVYTREGKKPKRAVAKGTAKSISTATLIIDQGGKFSQANVSTAIKKLCEDLIRKLKL*
Ga0075502_168679313300006357AqueousVYTKNTDIYTIIARATLYKNGKKKKIVNAKGQAKSISTATLIIDEGGKFSQANVSTAIKKLCEDLIDKLKL*
Ga0075503_163149623300006400AqueousIARGTYFDGKKKRKAVAKGTAKSISTATLVIDQSGKFSQANVSTAIKKLCEDLIRKLKL*
Ga0075515_1071994813300006404AqueousGVYSVDGKKKKKAVAKGTAKSISTATLIIDQGGKFSQANVSTAIKKLCEDLIRKLKL*
Ga0101441_12779513300006621Marine Surface WaterGEIVKEVNAKGTSKSISTSTLIIDNGGKFSQAGVSSALKKLCEQLIDKLKL*
Ga0098048_122024713300006752MarineQIIAGARLIVDGKVVKEVIAKGTSKSISTSTLIIDDGGKFSQAGVSSALKKVCEQLINKLKL*
Ga0070749_1022243013300006802AqueousNKKVREVTARGTAKAITTSTLIISNDGKFSQANVSTAIKKLCAQLIDELKI*
Ga0098060_107726933300006921MarineQAQLIVNGKPKKKVTARGTATSVSTATLIIDEGGEFSQADVSTAMKKVCEQLIKKLKLK*
Ga0099851_111799713300007538AqueousLAVYSKNTEATEIIARAYLTIKGKKKKPVVAKGQAKSISTATLIIDQGGQFSQTDVSTALKKVCEELIDKLKL*
Ga0099849_129200313300007539AqueousDETEIVAQAQLIVNGKPKKKVTARGTATSVSTATLIIDEGGKFSQADVSTAMKKVCEQLIKKLKLK*
Ga0099849_129254623300007539AqueousIYTIIARATLHKNGKKKKQVTAKGQAKSISSATLVVDKGGKFSQTNVSTAIKKLCEQLITKLKL*
Ga0102859_110561013300007708EstuarineKGKEVKKVVAKGQATSISASTLIIDKGGKFSQTNVSTALKKVCEQLIEKLKL*
Ga0105737_100996333300007862Estuary WaterGKKKKSVTSKGTAKEISTSTLVIDEGGKFSQANVSTAIKKLCEQLITKLKI*
Ga0105748_1040360013300007992Estuary WaterGARLILDGKVVKEVIAKGTSKSISTSTLIIDDGGKFSQASVSSALKKVCEQLINKLKL*
Ga0114340_101443313300008107Freshwater, PlanktonQLGGFSKNLSITVVVAKAYLIENGKVIKTAEAKGEAKDISTATLIIDQGGNFSQAGVSTALKKVCEQLIDKLLL*
Ga0114341_1005075143300008108Freshwater, PlanktonMQLGGFSKNLSITVIVAKAYLIENGKVIKTVEAKGEAKDISTATLIIDQGGKFSQAGVSTALKKVCEQLIDKLLL*
Ga0114346_130716913300008113Freshwater, PlanktonNGKIIKTTEAKGQAKDISTATLIIDQGGQFSQAGVSTALKKVCEQLIDNLLL*
Ga0114363_104078033300008266Freshwater, PlanktonAKAYLIENGKVIKTAEAKGEAKDISTATLIIDQGGKFSQAGVSTALKKVCEQLIDKLLL*
Ga0114364_101284413300008267Freshwater, PlanktonGKVIKTAEAKGEAKDISTATLIIDQGGNFSQAGVSTALKKVCEQLIDKLLL*
Ga0114876_117359723300008448Freshwater LakeSKNLSITVVVAKAYLIENGKVIKTAEAKGEAKDISTATLIIDQGGNFSQAGVSTALKKVCEQLIDKLLL*
Ga0102963_115768233300009001Pond WaterMIAAQATLYKEGKKKKSVTAKGTAKSISTATLIIDEGGKFSQANVSTAIKKLCEDLIEKL
Ga0105099_1094577513300009082Freshwater SedimentNGKVIKEVEAKGQAKDISTATLIIDKGGKFSQAGVSTSLKKVCEQLIDNLLL*
Ga0105103_1061037123300009085Freshwater SedimentIYSKNEEITEIIMQGKLFSQGKEIKKAVAKGQATSISASTLIIDKGGKFSQTNVSTALKKVCEQLIEKLKL*
Ga0102812_1017955913300009086EstuarineIREVTARGTAKAITTSTLIISNDGKFSQANVSTAIKKLCVQLIDELKI*
Ga0115559_117420213300009438Pelagic MarineTIKGKKKKPVVAKGQAKSISTATLIIDQGGKFSQSDVSTALKKVCEQLIDKLKL*
Ga0129348_132778223300010296Freshwater To Marine Saline GradientTDIYTIIARATLHKNGKKKKQVTAKGQAKSISSATLVVDKGGKFSQTNVSTAIKKLCEQLITKLKL*
Ga0136656_109102323300010318Freshwater To Marine Saline GradientGKSKKKVTAKGTAKSISTATLIIDQGGKFSQTDVSTALKKVCEDLIDKLKL*
Ga0157498_104752523300012666Freshwater, Surface IceVLKNNVQLGGFSKNMSITTVIAKAYLIENGKIIKTTEAKGQSKDIATATLIIDQGGQFSQTGVSIALKKVCEELINNLFL*
Ga0116815_102567313300013195MarineIIARATLLKNGKKKKQVVAKGTAKSISTATLVIDEGGKFSQANVSTAIKKLCEQLVQKLKL*
Ga0182051_122979113300016727Salt MarshKKPVVAKGVAKSISTATLIIDQGGKFSQTDVSTALKKVCVELIEKLKL
Ga0181401_111620613300017727SeawaterTIIARATLYKNGKKKKQVTAKGQAKSISSATLVVDEGGKFSQANVSTAIKKLCEQLFTKLKI
Ga0181405_106104513300017750SeawaterTEIVAQAQLIVNGKPKKKVTARGTATSVSTATLIIDEGGEFSQADVSTAMKKVCEQLIKKLKLK
Ga0181420_118976723300017757SeawaterDIYQISARATLYKGKKKKKSVTATGEAREVSTATLLIDEGGKFSQANVSTALKKVVEQLIKKFRFIPSNNLYPY
Ga0181413_119873523300017765SeawaterKKGKKKKQVTAKGQAKSVSTATLVVDKGGKFSQANVSTAIKKLCEQLVTKLKI
Ga0181425_119096913300017771SeawaterTEIVAQAQLIVNGKPKKKVTARGTATSVSTATLIIDEGGKFSQADVSTAMKKVCEQLIKKLKLK
Ga0181358_125529613300017774Freshwater LakeIKTTEAKGQSKDIATATLIIDQGGQFSQTGVSIALKKVCEELINNLFL
Ga0181423_104473223300017781SeawaterDIYQISARATLYKGKKKKKSVTATGEAREVSTATLLIDEGGKFSQANVSTALKKVVEQLIKKLKL
Ga0181355_132377613300017785Freshwater LakeIAKAYLIENGKVIKTTEAKGQSKDIATATLIIDQGGQFSQTGVSIALKKVCEELINNLFL
Ga0181424_1023792413300017786SeawaterIVDGKVVKEVIAKGTSKSISTATLIIDDGGKFSQAGVSSALKKVCEQLIDKLKL
Ga0181559_1077436523300018415Salt MarshKKKPVVAKGVAKSISTATLIIDQGGKFSQTDVSTALKKVCVELIEKLKL
Ga0181591_1005129813300018424Salt MarshLIIDGKSKKKVTAKGTAKSISTATLIIDQGGKFSQANVSTALKKVCVDLVKKLKL
Ga0181568_1070517613300018428Salt MarshKDGKKKKSVSARVTAKSVSTATLVIDEGGNFSQANVSTALKKLVEDLVKKLKL
Ga0181568_1092336713300018428Salt MarshDGKSKKPVIAKGTAKSISTATLIIDQGGKFSQANVSTALKKVCEQLIDKLKLK
Ga0182058_123820323300019283Salt MarshAAQAYIIKDGKKKKPVKATGEAKSISTATLIIDEGGKFSQANVSTAIKKLCEDLIDKLKL
Ga0194024_107945623300019765FreshwaterVVDGKSKKPVIAKGTAKSISTATLIIDQGGKFSQANVSTALKKVCEQLIDKLKLK
Ga0181359_116517123300019784Freshwater LakeTVYGNTVEVTEIIAQGKLLLDGKELKTVVVKGQAKSISTATLIIDSGGKFSQTNVSSALKKLCEQLIEKLKL
Ga0211733_1120435213300020160FreshwaterGKLLVDGKEAKTAVSKGQAKEVSTATLIIDKGGKFSQTNVSSALKKVCEQIIDKLKP
Ga0211729_1079900913300020172FreshwaterEVTEIVASAKLTLDGKEIKTVVVKGQAKSISTATLIIDEGGKFSQTNVSSALKKVCEQIIEKLKL
Ga0211731_1125016823300020205FreshwaterGNTVEVTEIIAQGKLLLDGKELKTVIVKGQAKSISTATLIIDSGGQFSQTNVSSALKKLCEQLIEKLKL
Ga0211650_105474023300020301MarineMKKEGVKNGKRKKQVTAKGTAKEISTATLLIDEGGKFSQTNVSTALKKVCIKLIDKLKI
Ga0211647_1011961213300020377MarineDEYQIIARATLIKNGKKKKQVTAKGTAKEVSTATLLIDEGGKFSQANVSTALKKVCIKLIDKLKI
Ga0211582_1037668323300020386MarineTLYKNGKKKKIVNAKGTAKSISTATLVIDEGGDFSQANVSTAIKKLCEQLITKLKI
Ga0211618_1023461823300020393MarineMAAYKDTDEYQIIARATLIKNGKKKKQVTAKGTAKEVSTATLLIDEGGKFSQANVSTALKKVCIKLIDKLKIXIK
Ga0211499_1018977123300020402MarineKKEYGRKKKQVTAKGQAKSISTATLLVDEGGKFSQANVSTAIKKLCEQLITKLKI
Ga0211532_1018046233300020403MarineYQLVARGTYSKEGKKPKTAVAKGTAKSISTATLIIDQGGNFSQANVSTAIKKLVEDLIRKLKL
Ga0211651_1019900813300020408MarineGKKKKIVNAKGQAKSISTSTLVVDEGGKFSQANVSTAMKKLCEQLISKLKL
Ga0211539_1012359023300020437MarineIYSKNTDEYQIIARATLIKNGKKKKQVTAKGTAKEVSTATLLIDEGGKFSQANVSTALKKVCIKLIDKLKI
Ga0211614_1053771713300020471MarineIKDGKKKKLATAKGQAKSISTATLVIDEGGKFSQANVSTAIKKLCEQLVTKLKI
Ga0213867_106864413300021335SeawaterARGELFVNGKKKKSTVAKGTSKEISTATLIIDDGGGFSQAGVSTALKKVCDQIINKLKL
Ga0213858_1033199513300021356SeawaterGELFVNGKKKKSTVAKGTSKEISTATLIIDDGGGFSQAGVSTALKKVCDQIINKLKL
Ga0213860_1000992773300021368SeawaterTEDETEIVAQAQLIVNGKPKKKVTARGTATSVSTATLIIDEGGKFSQADVSTAMKKVCEQLIKKLKLK
Ga0213865_1000753813300021373SeawaterVNGRGKKKVTAKGTAKSISTATLIIDKGGEFSQANVSTALKKVCVELIDKLKL
Ga0213866_1039262713300021425SeawaterVNGKGKKKVTAKGTAKSISTATLIIDKGGEFSQANVSTALKKVCVELINKLKL
Ga0222717_10000640403300021957Estuarine WaterEDETEIVAQAQLIVNGKPKKKVTARGTATSVSTATLIIDEGGEFSQADVSTAMKKVCEQLIKKLKLK
Ga0222717_1019777613300021957Estuarine WaterVNGKPKKKVTARGTAKSISTATLIIDEGGKFSQTDVSTAMKKVCEQLIKKLKLK
Ga0222716_1054614513300021959Estuarine WaterKKTVTAKGTAKSISTATLIIDEGGKFSQANVSTAIKKLCEQLIEKLKL
Ga0222715_1030097623300021960Estuarine WaterIYGKNTDTYMLAAQAYIIKDGKKKKPVKATGEAKSISTATLIIDEGGKFSQANVSTAIKKLCEDLIDKLKL
Ga0222713_1039623223300021962Estuarine WaterGVYGKNTDTYMLAAQAYIIKDGKKKKPVKATGEAKSISTATLIIDEGGKFSQANVSTAIKKLCEDLIDKLKL
Ga0222713_1069342423300021962Estuarine WaterKEIKKAVVKGQAKSVSASTLIIDKGGKFSQTNVSSALKKVCEQLIEKLKL
Ga0212030_102800213300022053AqueousNTESTEIIARAYLTIKGKKKKPVVAKGQAKSISTATLIIDKGGKFSQSDVSTALKKVCEQLIDKLKL
Ga0224905_10211913300022058SeawaterVYTIIARATLLKKGKKKKQVTAKGQAKSVSTATLVVDKGGKFSQANVSTAIKKLCEQLVTKLKI
Ga0212029_100800423300022063AqueousQLAIYGKNTESTEIIARAYLTIKGKKKKPVVAKGQAKSISTATLIIDKGGKFSQSDVSTALKKVCEQLIDKLKL
Ga0255761_1022779913300023170Salt MarshIIAQAKLVVDGKSKKPVIAKGTAKSISTATLIIDQGGKFSQANVSTALKKVCVDLVKKLKLXKKL
Ga0255766_1022214033300023172Salt MarshNTDEYQISARATLFKNGKKKKSVTAKGTADQVSTSTFLLDAGGKFSQASVSTAIKKVVEELIDKLKIXKIS
Ga0232122_110527413300023709Salt MarshIAKAYLIVDGKKKKPVVAKGVAKSISTATLIIDQGGKFSQTDVSTALKKVCVKLIEKLKL
Ga0233402_103599733300024229SeawaterDETEIVAQAQLIVNGKPKKKVTARGTATSVSTATLIIDEGGEFSQADVSTAMKKVCEQLIKKLKLK
Ga0228678_103354113300024244SeawaterIVNGKPKKKVTARGTATSVSTATLIIDEGGEFSQADVSTAMKKVCEQLIKKLKLK
Ga0228678_110576423300024244SeawaterLAVYSKNTDIYTIIARATLLNNGKKKKQVTAKGQAKSISTATLVLDEGGKFSQANVSSSIKKLTEQLVSKLKLXTK
Ga0228661_111347023300024266SeawaterIVAQAQLIVNGKPKKKVTARGTATSVSTATLIIDEGGEFSQADVSTAMKKVCEQLIKKLKLK
Ga0209232_114264323300025132MarineGKKKKQVTAKGQAKSVSTATLVVDKGGKFSQANVSTAIKKLCEQLVTKLKI
Ga0209136_103248523300025636MarineAKAYLTIKGKKKKAVVAKGTAKSISTATLIIDSGGKFSQTDVSTALKKVCIELIEKLKL
Ga0209136_103313123300025636MarineIKGKKKKAVVAKGTAKSISTATLIIDSGGKFSQSDVSTALKKVCEQLIDKLKL
Ga0209136_117172013300025636MarineDIYMIAAQATLYKEGKKKKSVTAKGTAKSISTATLIIDEGGKFSQANVSTAIKKLCEQLIEKLKL
Ga0208162_116623523300025674AqueousIYTIIARATLHKNGKKKKQVTAKGQAKSISSATLVVDKGGKFSQTNVSTAIKKLCEQLITKLKL
Ga0209653_107435123300025695MarineYLIVDGKKKKPVVAKGVAKSISTATLIIDQSGKFSQTDVSTALKKVCVELIEKLKL
Ga0209532_117843223300025696Pelagic MarineKKKSVTAKGTAKSISTSTLVIDGGGKFSQTNVSTAIKKLCERLINKLKIK
Ga0209137_108644713300025767MarineTEIIAKAYLTIKGKKKKAVVAKGTAKSISTATLIIDSGGKFSQSDVSTALKKVCEQLIDKLKL
Ga0209600_110280113300025821Pelagic MarineTEIIARAYLTIKGKKKKPVVAKGQAKSISTATLIIDQGGKFSQSDVSTALKKVCEQLIDKLKL
Ga0209953_104492423300026097Pond WaterDATEIIAEAKLIQNGKVLKKVVAKGVATDISTATLIIDKGGKFSQAGVSTALKKVSIDLIKKLKL
Ga0228647_106021013300026505SeawaterIARGVYSIDGKKKKKAVAKGTAKSISTATLIIDKGGKFSQANVSTAIKKLCEDLIRKLKL
Ga0208673_100651613300027192EstuarineRKIREVTARGTAKSITTSTLIISNDGKFSQANVSTAIKKLCVQLIDELKI
Ga0208973_105501523300027506MarineVFNRTEDETEIVAQAQLIVNGKPKKKVTARGTATSVSTATLIIDEGGKFSQADVSTAMKKVCEQLIKKLKLK
Ga0228674_103747423300028008SeawaterAQLIVNGKPKKKVTARGTATSVSTATLIIDEGGKFSQADVSTAMKKVCEQLIKKLKLK
Ga0257114_109148713300028196MarineRATLYKNGKKQKQVTAKGQAKSISSATLVVDEGGKFSQANVSTSIKKLCEQLITKLKL
Ga0228646_105389513300028280SeawaterKPKKKVTARGTATSVSTATLIIDEGGEFSQADVSTAMKKVCEQLIKKLKLK
Ga0228646_114015033300028280SeawaterIVAQAQLIVNGKPKKKVTARGTATSVSTATLIIDEGGKFSQADVSTAMKKVCEQLIKKLKLK
Ga0233394_102792113300028391SeawaterEDETEIVAQAQLIVNGKPKKKVTARGTATSVSTATLIIDEGGKFSQADVSTAMKKVCEQLIKKLKLK
Ga0228643_108309423300028396SeawaterETEIFAQAQLIVNGKPKKKVTARGTATSVSTATLIIDEGGEFSQADVSTAMKKVCEQLIKKLKLK
Ga0315907_1098005813300031758FreshwaterLGGFSKNLSITVVVAKAYLIENGKVIKTAEAKGEAKDISTATLIIDQGGNFSQAGVSTALKKVCEQLIDKLLL
Ga0315900_1004976313300031787FreshwaterKNNMQLGGFSKNLSITVVVAKAYLIENGKVIKTAEAKGEAKDISTATLIIDQGGNFSQAGVSTALKKVCEQLIDKLLL
Ga0315901_1006663813300031963FreshwaterLSITVIVAKAYLIENGKVIKTVEAKGEAKDISTATLIIDQGGKFSQAGVSTALKKVCEQLIDKLLL
Ga0335027_0896230_3_2123300034101FreshwaterGKNLSITVVIAKAYLIENGKIIKTTEAKGQAKDISTATLIIDQGGQFSQTGVSTSLKKVCEQLIDNLLL


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