Metagenome / Metatranscriptome Family F087264

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087264
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	71 residues
Representative Sequence	MRRPAVVIGLFLVCCAAACTLRRQVAPLSPYCRGGNPLAGVYHPSRLRVKSRCRVAVGTVSKVVFEPYDGDVHV
Number of Associated Samples	103
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	91.82 %
% of genes near scaffold ends (potentially truncated)	98.18 %
% of genes from short scaffolds (< 2000 bps)	90.00 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.273 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (23.636 % of family members)
Environment Ontology (ENVO)	Unclassified (37.273 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.455 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 22.55% β-sheet: 0.00% Coil/Unstructured: 77.45%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF12697	Abhydrolase_6	4.55
PF05201	GlutR_N	2.73
PF13302	Acetyltransf_3	1.82
PF09851	SHOCT	1.82
PF03793	PASTA	0.91
PF07366	SnoaL	0.91
PF14018	DUF4234	0.91
PF01391	Collagen	0.91
PF02274	ADI	0.91
PF07731	Cu-oxidase_2	0.91
PF13400	Tad	0.91
PF00005	ABC_tran	0.91
PF00589	Phage_integrase	0.91
PF00027	cNMP_binding	0.91
PF01522	Polysacc_deac_1	0.91
PF00353	HemolysinCabind	0.91
PF10944	DUF2630	0.91
PF00196	GerE	0.91
PF09579	Spore_YtfJ	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0373	Glutamyl-tRNA reductase	Coenzyme transport and metabolism [H]	2.73
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.91
COG1834	N-Dimethylarginine dimethylaminohydrolase	Amino acid transport and metabolism [E]	0.91
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.91
COG2235	Arginine deiminase	Amino acid transport and metabolism [E]	0.91
COG4874	Uncharacterized conserved protein	Function unknown [S]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.27 %
Unclassified	root	N/A	2.73 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.27 %
Unclassified	root	N/A	2.73 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.27 %
Unclassified	root	N/A	2.73 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	83.64 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.73 %
Unclassified	root	N/A	2.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	83.64 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.73 %
Unclassified	root	N/A	2.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	79.09 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.73 %
Unclassified	root	N/A	2.73 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.91 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	72.73 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.73 %
Unclassified	root	N/A	2.73 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.91 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	72.73 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	2.73 %
Unclassified	root	N/A	2.73 %
Rhodospirillales bacterium TMPK1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium TMPK1	0.91 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	72.73 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	2.73 %
Unclassified	root	N/A	2.73 %
Rhodospirillales bacterium TMPK1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium TMPK1	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459017\|G14TP7Y01DUVN8	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	626	Open in IMG/M
3300003659\|JGI25404J52841_10046001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	920	Open in IMG/M
3300005187\|Ga0066675_10865198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	683	Open in IMG/M
3300005294\|Ga0065705_10112438	All Organisms → cellular organisms → Bacteria	3962	Open in IMG/M
3300005339\|Ga0070660_101501125	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	573	Open in IMG/M
3300005340\|Ga0070689_100781382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	839	Open in IMG/M
3300005344\|Ga0070661_101626469	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	546	Open in IMG/M
3300005434\|Ga0070709_11657114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	522	Open in IMG/M
3300005435\|Ga0070714_100219354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1747	Open in IMG/M
3300005440\|Ga0070705_100462394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	954	Open in IMG/M
3300005441\|Ga0070700_100256343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1257	Open in IMG/M
3300005441\|Ga0070700_101485028	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300005444\|Ga0070694_101549688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	561	Open in IMG/M
3300005459\|Ga0068867_100124117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1998	Open in IMG/M
3300005467\|Ga0070706_101035127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	757	Open in IMG/M
3300005536\|Ga0070697_100071505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2846	Open in IMG/M
3300005544\|Ga0070686_100464412	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300005546\|Ga0070696_100332284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1172	Open in IMG/M
3300005558\|Ga0066698_10530490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	800	Open in IMG/M
3300005713\|Ga0066905_100530060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	985	Open in IMG/M
3300005840\|Ga0068870_11170365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	556	Open in IMG/M
3300006358\|Ga0068871_100525942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1069	Open in IMG/M
3300006604\|Ga0074060_11997893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	787	Open in IMG/M
3300006791\|Ga0066653_10539485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	590	Open in IMG/M
3300006804\|Ga0079221_11434434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300006845\|Ga0075421_100236228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2246	Open in IMG/M
3300006903\|Ga0075426_10069060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2526	Open in IMG/M
3300009093\|Ga0105240_10061488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4680	Open in IMG/M
3300009137\|Ga0066709_103685464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556	Open in IMG/M
3300009147\|Ga0114129_11391721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	866	Open in IMG/M
3300009148\|Ga0105243_10593009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1066	Open in IMG/M
3300009174\|Ga0105241_10095408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2354	Open in IMG/M
3300009177\|Ga0105248_11562013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	747	Open in IMG/M
3300009553\|Ga0105249_10953924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	926	Open in IMG/M
3300010041\|Ga0126312_10244698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1259	Open in IMG/M
3300010044\|Ga0126310_10753468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	744	Open in IMG/M
3300010371\|Ga0134125_12750123	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	535	Open in IMG/M
3300010373\|Ga0134128_10203441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2229	Open in IMG/M
3300010375\|Ga0105239_11629477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	746	Open in IMG/M
3300010375\|Ga0105239_13308102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
3300010863\|Ga0124850_1142204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	561	Open in IMG/M
3300011107\|Ga0151490_1672830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	554	Open in IMG/M
3300012198\|Ga0137364_10965463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	645	Open in IMG/M
3300012199\|Ga0137383_10888674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	650	Open in IMG/M
3300012201\|Ga0137365_10708957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	735	Open in IMG/M
3300012208\|Ga0137376_10746961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	843	Open in IMG/M
3300012210\|Ga0137378_10834877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	834	Open in IMG/M
3300012892\|Ga0157294_10004319	All Organisms → cellular organisms → Bacteria	2140	Open in IMG/M
3300012893\|Ga0157284_10307164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	522	Open in IMG/M
3300012895\|Ga0157309_10030156	All Organisms → cellular organisms → Bacteria	1248	Open in IMG/M
3300012900\|Ga0157292_10025589	All Organisms → cellular organisms → Bacteria	1449	Open in IMG/M
3300012937\|Ga0162653_100001810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1883	Open in IMG/M
3300012957\|Ga0164303_10366434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	877	Open in IMG/M
3300012976\|Ga0134076_10641648	Not Available	500	Open in IMG/M
3300013306\|Ga0163162_10868240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1017	Open in IMG/M
3300013308\|Ga0157375_11480515	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300015356\|Ga0134073_10224204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	636	Open in IMG/M
3300015372\|Ga0132256_100074627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3225	Open in IMG/M
3300015373\|Ga0132257_101574257	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300017656\|Ga0134112_10467028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300017657\|Ga0134074_1119788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	911	Open in IMG/M
3300017944\|Ga0187786_10459825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567	Open in IMG/M
3300018054\|Ga0184621_10007331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3087	Open in IMG/M
3300018071\|Ga0184618_10043960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1597	Open in IMG/M
3300018073\|Ga0184624_10286806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	738	Open in IMG/M
3300018073\|Ga0184624_10424964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	586	Open in IMG/M
3300019356\|Ga0173481_10093904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1138	Open in IMG/M
3300019362\|Ga0173479_10134157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	967	Open in IMG/M
3300020015\|Ga0193734_1059978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	686	Open in IMG/M
3300020059\|Ga0193745_1070696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	761	Open in IMG/M
3300022756\|Ga0222622_10347165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1033	Open in IMG/M
3300024181\|Ga0247693_1042539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	646	Open in IMG/M
3300024245\|Ga0247677_1050619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	606	Open in IMG/M
3300025906\|Ga0207699_11441993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300025910\|Ga0207684_10359198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1253	Open in IMG/M
3300025917\|Ga0207660_10649350	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300025923\|Ga0207681_11751985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300025927\|Ga0207687_10195055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1579	Open in IMG/M
3300025931\|Ga0207644_10418190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1098	Open in IMG/M
3300025944\|Ga0207661_10164804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1925	Open in IMG/M
3300025944\|Ga0207661_11982571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300025949\|Ga0207667_11207237	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300025960\|Ga0207651_12161278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300025981\|Ga0207640_10666172	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300026088\|Ga0207641_12600732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M
3300026523\|Ga0209808_1202623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	658	Open in IMG/M
3300026547\|Ga0209156_10071267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1781	Open in IMG/M
3300027695\|Ga0209966_1064075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	798	Open in IMG/M
3300028717\|Ga0307298_10166591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	643	Open in IMG/M
3300028717\|Ga0307298_10178612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	622	Open in IMG/M
3300028718\|Ga0307307_10158261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	709	Open in IMG/M
3300028719\|Ga0307301_10124071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	825	Open in IMG/M
3300028755\|Ga0307316_10162139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium TMPK1	799	Open in IMG/M
3300028755\|Ga0307316_10188062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	742	Open in IMG/M
3300028755\|Ga0307316_10307443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	580	Open in IMG/M
3300028771\|Ga0307320_10076873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1252	Open in IMG/M
3300028778\|Ga0307288_10186804	Not Available	794	Open in IMG/M
3300028787\|Ga0307323_10000351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	14438	Open in IMG/M
3300028807\|Ga0307305_10158438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1044	Open in IMG/M
3300028811\|Ga0307292_10059949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1439	Open in IMG/M
3300028819\|Ga0307296_10068876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1879	Open in IMG/M
3300028828\|Ga0307312_10140961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1523	Open in IMG/M
3300028884\|Ga0307308_10424786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	637	Open in IMG/M
3300031226\|Ga0307497_10545905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	579	Open in IMG/M
3300031421\|Ga0308194_10043056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1123	Open in IMG/M
3300031940\|Ga0310901_10533906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300031943\|Ga0310885_10528655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	646	Open in IMG/M
3300031995\|Ga0307409_101606684	Not Available	678	Open in IMG/M
3300032180\|Ga0307471_103089161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	590	Open in IMG/M
3300032954\|Ga0335083_10341319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1300	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.73%
Host-Associated	Host-Associated	26.36%
Engineered	Engineered	0.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.18%
Plants	Host-Associated → Plants	26.36%
Aquatic	Environmental → Aquatic	4.55%
Solid Waste	Engineered → Solid Waste	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.27%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.18%
Sediment	Environmental → Aquatic → Sediment	4.55%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.91%
Roots	Host-Associated → Plants → Roots	0.91%
Grass	Engineered → Solid Waste → Grass	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.09%
Loam	Environmental → Terrestrial → Soil → Loam	16.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.82%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.27%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.55%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.82%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.91%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.91%
Composting	Engineered → Solid Waste → Grass → Composting	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.18%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.73%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.91%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.91%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.91%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	23.64%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.09%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.55%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.64%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.73%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.82%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.82%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.82%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.91%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.91%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.91%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.91%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.91%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.91%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012937	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024181	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34	Environmental	Open in IMG/M
3300024245	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4ZMR_01715660	2170459017	Switchgrass, Maize And Mischanthus Litter	MRRPAVVLGVFLLCCTAACTLRRQVAPPSPYCRGESPMAGVYHPSRLKVKSRCAVAVGTVGKVKFEAYDGDVHLDLRLDPGYERLL
JGI25404J52841_100460013	3300003659	Tabebuia Heterophylla Rhizosphere	MRRPAAVIGVFLVCCTAACTLRRQVAPASPYCRGGNPLAGVYHPSRLHVRSRCRVAVGTVRKVVFEVYDGDVHVD
Ga0066675_108651983	3300005187	Soil	MRRPAIVLGLFLALCPAACSLRRQVTPPSPYCRRGNPLVGVYHPQRLRVKSGCRVAVGIV
Ga0065705_101124387	3300005294	Switchgrass Rhizosphere	MRRPAAVIGLFLVCCTAACTLRRQVAPPSPYCRGGSPMAGVYHPSRLRVKSRCRIAVGTVSKVVFEDYDGDVHV
Ga0070660_1015011252	3300005339	Corn Rhizosphere	MRRAAVVLGVFLLCCAAACSLRRQVAPPSPYCRAGNPLAGIYHSQRLVVKSPCRAAIGTVHEV
Ga0070689_1007813821	3300005340	Switchgrass Rhizosphere	MRRPAVVIGLFLVCCAAACTLRRQVAPLSPYCRGGNPLAGVYHPSRLRVKSRCRVAVGTVSKVVFEPYDGDVHVDLRLDPGY
Ga0070661_1016264691	3300005344	Corn Rhizosphere	MRRAAVVLGVFLLCCAAACSLRRQVAPPSPYCRAGNPLAGIYHSQRLVVKSPCRAAIGTVREV
Ga0070709_116571142	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MRRPAVVIGIFLVCCTGACTLRRQSAQLSPHCRGGNPMAGVYHPSRLNVKSRCRVVNGT
Ga0070714_1002193545	3300005435	Agricultural Soil	MRRPAAVIGIFLVCCTGACTLRRQSAQLSPRCRGGNPMAGVYHPSRLNVKSRCRVVNGTVRKVVFEQYDGDVHVDLRPDPGFA
Ga0070705_1004623941	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MGRPAVVLGLFLLLCAAACSLRRHVTLASPYCRGGGPLAGVYRPQRLRVKSRCRVAIGTVRKVKFEEYDGD
Ga0070700_1002563434	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MRRAAVLIGLFLVCCAAACTLRRQVAPLSPYCRGGNPLAGVYHPSRLRVKSRCRVAVGTVSKVVFEPYDGDVHVDLRLDPGYEHLL
Ga0070700_1014850283	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MRRAAVVIGVFLTCCTAACTLRREATPASPYCRGGNALAGVYHPSRLRVKSRCRVVVGTVRKV
Ga0070694_1015496883	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MLRPAVVIGLFLVCCAAACTLRRQVAPLSPYCRGGNPLAGVYHPSRLRVKSRCRVAVGTVSKVVFEPYDGDVHVDLRL
Ga0068867_1001241175	3300005459	Miscanthus Rhizosphere	MLRPAVVIGLFLVCCAAACTLRRQVALLSPYCRGGNPLAGVYHPSRLRVKSRCRVAV
Ga0070706_1010351271	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MLRPAVVIGLFLVCCAAACTLRRQVAPLSPYCRGGNPLAGVYHPSRLRVKSRCRVAVGSVSKVVFEPYDGDVHVD
Ga0070697_1000715055	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRRPAVVLGLFLALCAAACSLRRHVTLPSPYCRSGGPLAGVYRPQRLIVKSRCRVALGTVHKVKFEEYDGDVHVDLRVDPGYEKLLADG
Ga0070686_1004644121	3300005544	Switchgrass Rhizosphere	MRRAAVVIGVFLACCTAACTLRREATPASPYCRGGNALAGVYHPSRLRVKSRCRVVVGTVRKVVFE
Ga0070696_1003322844	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MRRPAVVIGLFLVCCAAACTLRRQVAPLSPYCRGGNPLAGVYHPSRLRVKSRCRVAVGTVSKVVFEPYDGDVHV
Ga0066698_105304901	3300005558	Soil	MRRPAVVLGLFLLLCAAACSLRRHVTLPSPYCRGGGPLAGVYHPQRLIVKSRCKIAIGTVHKVKFEEYDGDV
Ga0066905_1005300603	3300005713	Tropical Forest Soil	VIGLFLLTCTAACTLRRQAEPLSPYCRGGSPLAGVYHPERLVVKSRCRIAVGTVR
Ga0068870_111703651	3300005840	Miscanthus Rhizosphere	MRRAAVVIGVFLACCTAACTLRREATPASPYCRGGNALAGVYHPSRLRVKSRCRVVVGTVRKVVFEPYD
Ga0068871_1005259424	3300006358	Miscanthus Rhizosphere	MRRPAVVIGLFLVCCAAACTLRRQVAPLSPYCRGGNPLAGVYHPSRLRVKSRCRVAVGTVSKV
Ga0074060_119978931	3300006604	Soil	MRRPAVVIGLFLVCCTVACTLRRQVSPPSPYCRDGNPLAGVYHPSRLRVKSRCRVAVGTVSKVVFEPYDGDVHVDLR
Ga0066653_105394852	3300006791	Soil	MGRPAALIAIALLLYVAACSLRRPGAPPSPYCRGGSPMAGVYHPQRLQVKGRCRVAIGTVTHVRFEAYDGDVHVDLRPDPGY
Ga0079221_114344343	3300006804	Agricultural Soil	MRRATVVIGVFLACCTGACTLRRHVAPASPYCRGGNPLAGVYHPSRLRVKSRCRVVVGTVRK
Ga0075421_1002362284	3300006845	Populus Rhizosphere	MRRAAVVIGIFLVSCTAACTLRRHAEPLSPYCRGGPPLAGVYHPQRLVVKSRCRVAVGTV
Ga0075426_100690606	3300006903	Populus Rhizosphere	MRRPAAVIGIFLVCCTGACTLRRQSAQLSPRCRGGNPMAGVYHPSRLNVKSRCRVVNGTVRKVVFEQYDGDVHVDLR
Ga0105240_100614881	3300009093	Corn Rhizosphere	MRRAAVLIGLFLVCCAAACTLRRQVAPLSPYCRGGNPLAGVYHPSRLRVKSRCRVAVGTVSKVVFEPYDGDVHVDLRLDPGYEHLLS
Ga0066709_1036854641	3300009137	Grasslands Soil	MRRFAAILGLFLLLCTAACSLRRQVSLPSPYCRGGGALAGVYRPQRLEVKSRCQVAVGTVRKVKFEDYDGDVHLDLRP
Ga0114129_113917213	3300009147	Populus Rhizosphere	MRRPAVVLGLFLALCAAACSLRRHVALPSPYCRGGGPLAGVYRPQRLRVKSGCRIAIGTVHKVKFEEYDGDVHIDLRPDPGYEKLLS
Ga0105243_105930094	3300009148	Miscanthus Rhizosphere	MRRPAVVIGLFLVCCAAACTLRRQVAPLSPYCRGGNPLAGVYHPSRLRVKSRCRVAVGTVSKVVFEPYDGDVHVDLRLD
Ga0105241_100954081	3300009174	Corn Rhizosphere	MRRAAVVIGVFLTCCTAACTLRREATPASPYCRGGNALAGVYHPSRLRVRSRCRVVVGTVRKVVFEPYDGD
Ga0105248_115620131	3300009177	Switchgrass Rhizosphere	MLRPAVVIGLFLVCCAAACTLRRQVAPLSPYCRGGNPLAGVYHPSRLRVKSRCRVAVGTVSKVVFEP
Ga0105249_109539241	3300009553	Switchgrass Rhizosphere	MRRAAVVIGIFLVSCTAACTLRRHAEPLAPYCRGGPPLAGVYHPQRLVVKSRCRVAVGTVRAVKFEDYDGDVHVDLRL
Ga0126312_102446983	3300010041	Serpentine Soil	VRRAAVVIGIFLLSCTAACTLRRHAEPLSPYCRGGSPLAGVYHPQRLVVKSRCRVAVGTVRAVKFEDYD
Ga0126310_107534681	3300010044	Serpentine Soil	VIGIFLLSCTAACTLRRHAEPLSPYCRGGSPLAGVYHPQRLVVKSRCRVAVGTVRAGKFADYEGDVHVDLRIAA
Ga0134125_127501232	3300010371	Terrestrial Soil	MRRTAVVLGVFLVCCTAACSLRRQVAPPSPYCRAGNPLAGVYHSQRLVVKSRCRAAIGTVRKV
Ga0134128_102034411	3300010373	Terrestrial Soil	MRRAAVVIGVFLACCTAACTLRREATPASPYCRGGNALAGVYHPSRLRVKSRCRVVVGTVRKVV
Ga0105239_116294771	3300010375	Corn Rhizosphere	MLRPAVVIGLFLVCCAAACTLRRQVAPLSPYCRGGNPLAGVYHPSRLRVKSRCRVAVGTVSKVVFEPYDGD
Ga0105239_133081022	3300010375	Corn Rhizosphere	MRRPAVVIGLFLVCCAAACTLRRQVAPLSPYCRGGNPLAGVYHPSRLRVKSRCRVAVGTVSKVVFEPYDGDVHVDLRL
Ga0124850_11422041	3300010863	Tropical Forest Soil	MRRAAVVIGIFLVCCTAACTLRRHAELLSPYCRGGPPLAGVYHPQRLVVKSRCRVAVGTVRAVKFEEYDGDVHVDLRLDPAYEGLLDDG
Ga0151490_16728303	3300011107	Soil	MRRPAVVLGVFLLCCAAACTLRRQVAPSSPYCRGGNPLAGVYHPQRLNVKNRCAVAVGTVGKVKFEPYDGDVHIDVQLDRGYERLL
Ga0137364_109654633	3300012198	Vadose Zone Soil	MRRPAIVLGLFLALCAAGCSLRRQVTLPSPYCRRGNPLVGVYHPQRLRVKSGCRVAVGIVDKVKFEAFDGDVHV
Ga0137383_108886743	3300012199	Vadose Zone Soil	MRRPAVVLGLFLVLCAAACSLRRQVSLPSPYCRRGGALAGVYRPQRLRVKSACRIAVGTVRKVKFEEYDGDV
Ga0137365_107089571	3300012201	Vadose Zone Soil	MQRPAAVLGVLLLLYVAACSLRRPAAPPSPYCRGGSPMAGVYHPQRLQVKSRCRVAIGTVTHVKFEAYDGDVHVDLRPDP
Ga0137376_107469614	3300012208	Vadose Zone Soil	MRRPAIVLGLFLALCAAGCSLRRQVTLPSPYCRRGNPLVGVYHPQRLRVKSGCRVAVGIVDKVKFEAFDGDVHVDLRPDPGYEHLLARPSD
Ga0137378_108348771	3300012210	Vadose Zone Soil	MRRPAVVLGLFLLLCAAACSLRRHVTLSSPYCRGGGPLAGVYHPQRLIVKSRCRVAIGTVHKVKFE*
Ga0157294_100043193	3300012892	Soil	MRRAAVVIGIFLVSCTGACTLRRHAEPLSPYCRGGPPLAGVYHPQRLVVKNRCRVAVGTVRAVKFEDYDG
Ga0157284_103071641	3300012893	Soil	MRRAAVVIGIFLVSCTGACTLRRHAEPLSPYCRGGPPLAGVYHPQRLVVKNRCRVAVGT
Ga0157309_100301563	3300012895	Soil	MRRAAVVIGIFLVSCTGACTLRRHAEPLSPYCRGGPPLAGVYHPQRLVVKNRCRVAVGTVRAV
Ga0157292_100255893	3300012900	Soil	MRRAAVVIGIFLVSCTGACTLRRHAEPLSPYCRGGPPLAGVYHPQRLVVKNRCRVA
Ga0162653_1000018104	3300012937	Soil	MRRPAVVLGVFLACCAAACSLQRHVAPPSPYCRGGNPLAGVYHPQRLNVKSRCAGAVRVSPGEGVHPA
Ga0164303_103664341	3300012957	Soil	MRRSAAVIGLFLVCCAAACTLRRQVAPASPYCRGGNPLAGVYHPSRLRVKSRCRVAV
Ga0134076_106416482	3300012976	Grasslands Soil	VRRPAVLLVLFLALCAAACSLRRQVSLPSPHCRGGGPLAGVYRPQRLRVKSGCTVAVGTVRKVKFEEYDGDVH
Ga0163162_108682401	3300013306	Switchgrass Rhizosphere	MLRPAVVIGLFLVCCAAACTLRRQVAPLSPYCRGGNPLAGVYHPSRLRVKSRCRVAVGTVSKVVFEPYDGDVHVDLRLDPGYEQ
Ga0157375_114805151	3300013308	Miscanthus Rhizosphere	MRRAAVVIGVFLACCTAACTLRREATPASPYCRGGNALAGVYHPSRLRVKSRCRV
Ga0134073_102242043	3300015356	Grasslands Soil	VRRPAVLLALFLACCTAACSLRRQVTLPSPYCRGGNPLAGVYDPQRLRVKSRCRVAIGTVDKV
Ga0132256_1000746275	3300015372	Arabidopsis Rhizosphere	MRRPAAVIGVFLVCCTAACTLRRQVAPASPYCRGGNPLAGVYHPSRLLVKRRCRVVVG
Ga0132257_1015742571	3300015373	Arabidopsis Rhizosphere	MRRPAAVIGVFLVCCTAACTLRRQVTPTSPYCRGGNPLAGVYHPSRLRVKRRCR
Ga0134112_104670281	3300017656	Grasslands Soil	MRRAVVVIGLFLVCCTAACTLQRHVAPASPYCRGGNPLAGVYHPSRLRVKSRCRVAVGTVSKVVFEPYDGDVHIDLRPDDR
Ga0134074_11197881	3300017657	Grasslands Soil	MRRPAAVIGVFLLFCTAACSLRRQSAPASPYCRGGGPLAGVYHPQRLNVKSRCRVAVGTVRQVKFEEYDGDVHIGLRLDPGQEKLLSD
Ga0187786_104598254	3300017944	Tropical Peatland	MRRPAIVLLLFLACCTAACSLRRQVTLPSPYCRRGNPLAGVYHPQRLNVKSGCRVAVGIVDKVKFEAFDGDVHVDLR
Ga0184621_100073311	3300018054	Groundwater Sediment	MRRPAAVLGLFLACCAAACSLQRHVAPPSPYCRGGNPLAGVYHPQRLNVKSRCTVAVGTVTKVKAEAYDGDLHLDLRLDPGYENLLDD
Ga0184618_100439604	3300018071	Groundwater Sediment	MRRPAAVLGLFLACCAAACSLQRHVAPPSPYCRGGNPLAGVYHPQRLNVKSRCAIAVGTVGKVKFEAYDGDLHVDLRLDPGYERLLD
Ga0184624_102868061	3300018073	Groundwater Sediment	MVIFLLCCTAACTLRRQVALPSPYCRGGPPLAGVYHAPRLVVKSRCRVAVGTVREVKFEEYDGDVHVDLR
Ga0184624_104249642	3300018073	Groundwater Sediment	MRRAAVVIGIFLVSCTAACTLRRHAEPVSPYCHGGPPLAGVYHPQRLVVKSRCRVAVGTV
Ga0173481_100939043	3300019356	Soil	MRRAAVVIGIFLVSCTGACTLRRHAEPLSPYCRGGPPLAGVYHPQRLVVKNRCRVAVGTVEKVKPELYDGDIH
Ga0173479_101341571	3300019362	Soil	MRRAAVVIGIFLVSCTGACTLRRHAEPLSPYCRGGPPLAGVYHPQRLVVKNRCRVAVGTV
Ga0193734_10599781	3300020015	Soil	MRRPAAVIGVFLVCCTAACTLRRQVAPTSPYCRGGNPMAGVYHPSRLRVKSRCRVVVGTV
Ga0193745_10706961	3300020059	Soil	MRRPAAVLGLFLACSAAACSLQRHVAPPSPYCRGGNPLAGVYHPQRLNVKSRCAIAVGTVGKVKFEAYDGDLHVDLRLDPGYEKLL
Ga0222622_103471652	3300022756	Groundwater Sediment	MRRAAVVLGVFLVCCAAACSLRRQVAPPSPYCRAGNPLAGVYHSQRLVVKSRCRAAIGTVRKVKFEEYDGDVHIDLRVDPPYEKLLSD
Ga0247693_10425392	3300024181	Soil	MRRPACVIGVFLVCCNAACTLRRESAPPSPHCRPGNALAGVYHPSRLNVKSRCRVVNGTVRKVVFE
Ga0247677_10506194	3300024245	Soil	MRRAAVVLALFLTCCTAACSLRRQVTLPSPYCRGGNPLAGVYHPQRLRVKSRCRVAIGTVDAVKFEA
Ga0207699_114419931	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MRRPAAVIGIFLVCCTGACTLRRQSAQLSPRCRGGNPMAGVYHPSRLNVKSRCRVVNGTVRKVVFEQYDGDV
Ga0207684_103591981	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRRPAVVLGLFLALCAAACSLRRHVTLPSPYCRSGGPLAGVYRPQRLIVKSRCRVALGTVHKVKFEEYDGDVHVDLRPDPGYEKLLAD
Ga0207660_106493503	3300025917	Corn Rhizosphere	MRRAAVVIGVFLTCCTAACTLRREATPASPYCRGGNALAGVYHPSRLRVKSRCRVVVGTVRK
Ga0207681_117519851	3300025923	Switchgrass Rhizosphere	MRRAAVVIGIFLVSCTAACTLRRHAEPLSPYCRGGPPLAGVYHPQRLVVKSRCRVAVGTVRAV
Ga0207687_101950551	3300025927	Miscanthus Rhizosphere	MRRRAVVIGLFLVCCAAACTLRRQVAPLSPYCRGGNPLAGVYHPSRLRVKSRCRVAVGTVSKVVFEPYDGDVHVDLRLDPGYEHL
Ga0207644_104181901	3300025931	Switchgrass Rhizosphere	MRRAAAVTGVFLVCCTAACTLRRQAAPLSPHCRGGNPLAGVYHPSRLNVKSRCRV
Ga0207661_101648043	3300025944	Corn Rhizosphere	MRRAAVVIGVFLTCCTGACTLRREVAPASPYCRGGSALAGVYHPSRLRVKSRCRVVVGTVRKVVFEQYD
Ga0207661_119825712	3300025944	Corn Rhizosphere	MRRPAAVIGVFLVCCAAACTLRRQVAPPSPYCRGGNPLAGVYHPSRLRVNSRCRVAVGTVSKVAFEPYDGDVHVDLRLD
Ga0207667_112072371	3300025949	Corn Rhizosphere	MRRAAVVIGVFLACCTAACTLRREATPASPYCRGGNALAGVYHPSRLRVKSRCRVVVGTVRK
Ga0207651_121612781	3300025960	Switchgrass Rhizosphere	MRRAAVVIGVFLACCAGACTLRRQVAPASPYCRGGSPLAGVYHPSRLRVKSRCRVVV
Ga0207640_106661723	3300025981	Corn Rhizosphere	MRRAAVVIGVFLACCTAACTLRREATPASPYCRGGNALAGVYHPSRLRVKSRCRVVVGTVRKV
Ga0207641_126007321	3300026088	Switchgrass Rhizosphere	MRRPAVVIGIFLVCCTGACTLRRQSAQLSPHCRGGNPMAGVYHPSRLNVKSRCRVVNGTVRKVVFEQYD
Ga0209808_12026233	3300026523	Soil	MRRPAVVLGLFLLLCAAACSLRRHVTLPSPYCRGGGPLAGVYHPQRLIVKSRCKIAIGTVHKVKFEEYDGD
Ga0209156_100712675	3300026547	Soil	VRRPAVLLALFLACCTAACSLRRQVTLPSPYCRGGNPLAGVYHPQRLRVKSRCRVAIGTVDKVKFEVFDGD
Ga0209966_10640752	3300027695	Arabidopsis Thaliana Rhizosphere	MRRAAVVIGIFLVSCTGACTLRRHAEPLSPYCRGGPPLAGVYHPQRLVVKNRCRVAVGTVRAVKFEDYDGDVHVDLRLDQAYDGLLDDGNGR
Ga0307298_101665913	3300028717	Soil	MRRPAAVLGLFLACCAAACSLQRHVAPPSPYCRGGNPLAGVYHPQRLNVKSRCAIA
Ga0307298_101786123	3300028717	Soil	MRRPAVVIGLFLVCCTAACTLRRQAAPPPSPYCRGGGPLAGIYHPQRLTVKDRCRIAVGTVGKVVFEAYDGDVHIDLRLDPGY
Ga0307307_101582613	3300028718	Soil	MRRPAAVLGLFLACCAAACSLQRHVAPPSPYCRGGNPLAGVYHPQRLNVKSRCAIAVGTVGKVKFEAYDGDLHVDLRLDPG
Ga0307301_101240711	3300028719	Soil	MRRPAAVLGLFLACCAAACSLQRHVAPPSPYCRGGNPLAGVYHPQRLNVKSRCAIAVGTVGKVKFEAYDGDLHV
Ga0307316_101621392	3300028755	Soil	MRRAAVVLGVFLVCCAAACSLRRQVAPPSPYCRAGNPLAGVYHSQRLVVKSRCRAAIGTVRKVKFEEYD
Ga0307316_101880621	3300028755	Soil	MRRPAVVIGVFLLCCAAACTLRRQVTPPSPYCRGGNPLAGVYHPQRLNVKSRCAMAVGTVGKVKF
Ga0307316_103074431	3300028755	Soil	MRRPAAVLGLFLACCAAACSLQRHVAPPSPYCRGGNPLAGVYHPQRLNVKSRCALAIGTVGKV
Ga0307320_100768731	3300028771	Soil	MRRTAVVLGVFLLCCTAACTLRRQVTPPSPYCRGGNPLAGVYHPQRLRVRNRCRVV
Ga0307288_101868042	3300028778	Soil	MRRPAAVIGLFLVCCTAACTLRRQVAPASPYCRGGNPLAGVYHASRLRVKSRCRVVVGTVSKVVFEPYDGDVH
Ga0307323_100003511	3300028787	Soil	MRRPAVVIGVFLLCCAAACTLRRQVAPSSPYCRGGNPLAGVYHPQRLNVKSRCAVAVGTVGKVKFEAYDGDVHLDLRLDP
Ga0307305_101584381	3300028807	Soil	MRRTAVVLGVFLLCCTAACTLRRQVTPPSPYCRGGNPLAGVYHPQRLRVRSRCRVVVGTVSKVVFEEYDGDVHVDLRVDPGYEGLLA
Ga0307292_100599491	3300028811	Soil	MRRPAAVLGLFLACCAAACSLQRHVAPPSPYCRGGNPLAGVYHPQRLNVKSRCAIAVGTVGKVKFEAYDGDLHVDLRLDPGY
Ga0307296_100688761	3300028819	Soil	MRRPAVVLGLFLLLCAAACSLRRHVTLPSPYCRGGGPLAGVYHPQRLIVKSRCRVALGTVRKVKF
Ga0307312_101409613	3300028828	Soil	MRRPAVVIGLFLVCCTAACTLRRQAAPPPSPYCRGGGPLGGVYHPQRLIVKDRCRIAVGTVGKVVFEAYDGDVHIDLRLDPGYESLLSDG
Ga0307308_104247861	3300028884	Soil	MRRPAVVLGLFLLLCAAACSLRRHVSLPSPYCRGGGPLAGVYRPQRLIVKSRCRVALGTV
Ga0307497_105459052	3300031226	Soil	MRRAAAVIGLFLVCCTAACTLRRQVAPASPYCRGGNPLAGVYHPSRLRVKSRCRVALGTVSK
Ga0308194_100430562	3300031421	Soil	MRRPAVVLGLFLLLCAAACSLRRHVTLPSPYCRGGGPLAGVYHPQRLIVKSRCRIALGTVRKVKFEEYDGDVHIDLRPD
Ga0310901_105339061	3300031940	Soil	MRRPAAVIGIFLVCCTGACTLRRQSAQLSPHCRGGNPMAGVYHPSRLNVKSRCRVVNGTVRKVVFEQYDGDVHVELRPDP
Ga0310885_105286552	3300031943	Soil	MRRAAVVIGIFLVSCTAACTLRRHAEPLSPYCRGGPPLAGVYHPQRLVVKSRCRVAVGTVRAVKFEDYDGDVHVDLRLDQ
Ga0307409_1016066843	3300031995	Rhizosphere	VLRALVVVGLFLACCAAACSLRREAVSASPYCRGGSPLAGVYHSSRLRVKSHCRVAVGTV
Ga0307471_1030891612	3300032180	Hardwood Forest Soil	MRRPAIVLGLFLALCAAACSVRRQVVLPSPYCRGGNPLAGVYHPQRLRVKSRCRVAIGIVDKVKFEAFDGDVHVDLRPDPPYE
Ga0335083_103413191	3300032954	Soil	MRRPAIVLFLFLACCTAACSLRRQVTLPSPYCRRGNPLAGVYHPQRLHVKSGCRVAVGIVDKVKFEAFDG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087264

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences