Metagenome / Metatranscriptome Family F087154

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087154
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	43 residues
Representative Sequence	PSGVGRRSGLPVSVSLIGAPGADWDLLAAGAALQDELGTVAP
Number of Associated Samples	103
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.91 %
% of genes near scaffold ends (potentially truncated)	98.18 %
% of genes from short scaffolds (< 2000 bps)	91.82 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (51.818 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (10.909 % of family members)
Environment Ontology (ENVO)	Unclassified (45.455 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.455 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60. 1Bog_all_C_01536750 2ICChiseqgaiiDRAFT_05693871 3JGI11643J12802_102513091 4JGI10214J12806_100842811 5JGI10216J12902_1015166502 6Ga0062595_1024595022 7Ga0066809_100703332 8Ga0070666_105498061 9Ga0070660_1004482831 10Ga0070673_1013153161 11Ga0070714_1006843641 12Ga0070663_1002738483 13Ga0070662_1017749411 14Ga0070702_1011822241 15Ga0068852_1023445611 16Ga0068864_1012266991 17Ga0066905_1001688093 18Ga0075289_10764961 19Ga0075281_10862922 20Ga0075273_100650891 21Ga0081455_104109741 22Ga0066652_1005179653 23Ga0075026_1010298013 24Ga0074048_100714231 25Ga0074063_133582511 26Ga0099827_112962672 27Ga0111539_102181964 28Ga0105245_113577462 29Ga0105245_114710472 30Ga0105245_130956711 31Ga0075418_110014791 32Ga0075418_124933171 33Ga0114129_113214942 34Ga0114129_119082872 35Ga0105243_118234222 36Ga0105248_111768111 37Ga0105237_109197531 38Ga0105249_105136981 39Ga0105239_127949621 40Ga0126381_1012828642 41Ga0120167_10540571 42Ga0137375_100420611 43Ga0157308_101341521 44Ga0164241_100276456 45Ga0164300_110343241 46Ga0126369_105169753 47Ga0164308_119690151 48Ga0164307_105861101 49Ga0157373_103905092 50Ga0157372_130521682 51Ga0163163_109896131 52Ga0182008_100453623 53Ga0173483_108121071 54Ga0132255_1055829782 55Ga0182033_116349571 56Ga0187775_104138312 57Ga0190268_107092252 58Ga0173479_108054762 59Ga0206354_108801032 60Ga0210381_103207862 61Ga0247790_101550532 62Ga0247756_11326011 63Ga0247754_10466441 64Ga0209751_101546524 65Ga0207688_104355192 66Ga0207671_107364111 67Ga0207657_109487092 68Ga0207652_105059701 69Ga0207687_115490061 70Ga0207690_106215051 71Ga0207669_105086252 72Ga0207691_105360401 73Ga0207691_110724611 74Ga0207661_109340802 75Ga0207679_120866051 76Ga0207712_118986641 77Ga0208527_10150881 78Ga0207678_102943093 79Ga0207678_111006602 80Ga0207676_109703472 81Ga0207676_124298681 82Ga0207981_10447021 83Ga0209382_107678612 84Ga0233417_101053853 85Ga0268266_121754392 86Ga0247822_106127971 87Ga0307299_100796041 88Ga0307503_104666321 89Ga0247824_106258111 90Ga0307289_100317121 91Ga0268386_100879331 92Ga0265327_105021831 93Ga0318516_100163236 94Ga0318560_102366991 95Ga0318552_103165292 96Ga0318512_103545832 97Ga0310907_107133731 98Ga0310892_103779321 99Ga0306925_114351042 100Ga0308174_105790781 101Ga0310885_107743132 102Ga0308176_112638993 103Ga0318553_106605161 104Ga0335085_120434382 105Ga0335082_1000841912 106Ga0335070_108583011 107Ga0335084_117840202 108Ga0335077_122066362 109Ga0326726_112695121 110Ga0314865_149692_498_620
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60. 1Bog_all_C_01536750 2ICChiseqgaiiDRAFT_05693871 3JGI11643J12802_102513091 4JGI10216J12902_1015166502 5Ga0066809_100703332 6Ga0070660_1004482831 7Ga0070714_1006843641 8Ga0070662_1017749411 9Ga0068864_1012266991 10Ga0075281_10862922 11Ga0075026_1010298013 12Ga0074063_133582511 13Ga0075418_110014791 14Ga0105243_118234222 15Ga0105248_111768111 16Ga0126381_1012828642 17Ga0120167_10540571 18Ga0126369_105169753 19Ga0157372_130521682 20Ga0182008_100453623 21Ga0187775_104138312 22Ga0190268_107092252 23Ga0173479_108054762 24Ga0206354_108801032 25Ga0207691_105360401 26Ga0207712_118986641 27Ga0207678_102943093 28Ga0207678_111006602 29Ga0307503_104666321 30Ga0318512_103545832 31Ga0308174_105790781 32Ga0318553_106605161 33Ga0335070_108583011 34Ga0335077_122066362 35Ga0314865_149692_498_620
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42 1Ga0099827_112962672 2Bog_all_C_01536750 3ICChiseqgaiiDRAFT_05693871 4JGI10214J12806_100842811 5JGI10216J12902_1015166502 6Ga0062595_1024595022 7Ga0070666_105498061 8Ga0070660_1004482831 9Ga0070673_1013153161 10Ga0070714_1006843641 11Ga0070702_1011822241 12Ga0066905_1001688093 13Ga0075273_100650891 14Ga0075026_1010298013 15Ga0074048_100714231 16Ga0074063_133582511 17Ga0111539_102181964 18Ga0105245_113577462 19Ga0105245_130956711 20Ga0075418_110014791 21Ga0114129_113214942 22Ga0105243_118234222 23Ga0126381_1012828642 24Ga0120167_10540571 25Ga0164300_110343241 26Ga0126369_105169753 27Ga0157373_103905092 28Ga0182008_100453623 29Ga0187775_104138312 30Ga0190268_107092252 31Ga0173479_108054762 32Ga0206354_108801032 33Ga0207688_104355192 34Ga0207691_105360401 35Ga0207712_118986641 36Ga0207678_102943093 37Ga0207678_111006602 38Ga0207676_109703472 39Ga0207981_10447021 40Ga0268266_121754392 41Ga0307503_104666321 42Ga0307289_100317121 43Ga0318516_100163236 44Ga0318560_102366991 45Ga0318552_103165292 46Ga0308174_105790781 47Ga0318553_106605161 48Ga0335085_120434382 49Ga0335082_1000841912 50Ga0335070_108583011 51Ga0335084_117840202 52Ga0335077_122066362 53Ga0314865_149692_498_620
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.86% β-sheet: 2.86% Coil/Unstructured: 74.29%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF04909	Amidohydro_2	69.09
PF01614	IclR	5.45
PF09339	HTH_IclR	4.55
PF01144	CoA_trans	1.82
PF00378	ECH_1	1.82
PF05977	MFS_3	1.82
PF02771	Acyl-CoA_dh_N	0.91
PF08448	PAS_4	0.91
PF07690	MFS_1	0.91
PF13458	Peripla_BP_6	0.91

Showing 1 to 10 of 14 entries

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COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	5.45
COG1788	Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit	Lipid transport and metabolism [I]	1.82
COG2057	Acyl-CoA:acetate/3-ketoacid CoA transferase, beta subunit	Lipid transport and metabolism [I]	1.82
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	1.82
COG4670	Acyl CoA:acetate/3-ketoacid CoA transferase	Lipid transport and metabolism [I]	1.82
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.91
COG3342	Uncharacterized conserved protein, Ntn-hydrolase superfamily	General function prediction only [R]	0.91

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	48.18 %
Unclassified	root	N/A	51.82 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	48.18 %
Unclassified	root	N/A	51.82 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.18 %
Unclassified	root	N/A	51.82 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	3.64 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	21.82 %
Unclassified	root	N/A	51.82 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	21.82 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	3.64 %
Unclassified	root	N/A	51.82 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11.82 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3.64 %
Unclassified	root	N/A	51.82 %

Name	Rank	Taxonomy	Distribution
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.82 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.91 %
Unclassified	root	N/A	51.82 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	3.64 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3.64 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.91 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.91 %
Unclassified	root	N/A	51.82 %

Name	Rank	Taxonomy	Distribution
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	0.91 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3.64 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.91 %
Unclassified	root	N/A	51.82 %

Name	Rank	Taxonomy	Distribution
Arthrobacter deserti	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter deserti	0.91 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3.64 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.91 %
Unclassified	root	N/A	51.82 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
(restricted) 3300028043\|Ga0233417_10105385	Not Available	1189	Open in IMG/M
2140918008\|ConsensusfromContig264297	Not Available	643	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0569387	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	509	Open in IMG/M
3300000890\|JGI11643J12802_10251309	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300000891\|JGI10214J12806_10084281	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300000956\|JGI10216J12902_101516650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	735	Open in IMG/M
3300004479\|Ga0062595_102459502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	518	Open in IMG/M
3300005168\|Ga0066809_10070333	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300005335\|Ga0070666_10549806	Not Available	840	Open in IMG/M
3300005339\|Ga0070660_100448283	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M

Showing 1 to 10 of 110 entries

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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	60.91%
Host-Associated	Host-Associated	39.09%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	2.73%
Plants	Host-Associated → Plants	39.09%
Terrestrial	Environmental → Terrestrial	58.18%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	1.82%
Peat	Environmental → Terrestrial → Peat	0.91%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.91%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere	31.82%
Roots	Host-Associated → Plants → Roots	0.91%
Sediment	Environmental → Aquatic → Sediment	0.91%
Soil	Environmental → Terrestrial → Soil	56.36%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.45%
Lake	Environmental → Aquatic → Freshwater → Lake	0.91%
Loam	Environmental → Terrestrial → Soil → Loam	5.45%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.91%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.91%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.64%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.18%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.91%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.91%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.00%

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.36%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.64%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.55%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.82%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.91%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.91%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.64%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.45%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.91%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.91%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	7.27%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.73%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.91%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.73%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.91%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.91%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.91%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.91%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.91%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	3.64%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.55%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.91%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.91%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.91%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.82%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.91%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M

Showing 1 to 10 of 103 entries

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Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Bog_all_C_01536750	2140918008	Soil	RSGLPTSVSLIGPPNADWNLIAAGVALQSRLGPVAL
ICChiseqgaiiDRAFT_05693871	3300000033	Soil	SGTGSRSGLPVSXSLIGAPGTEWDLLAWGAALHDRLGTVSP*
JGI11643J12802_102513091	3300000890	Soil	FPGVSLPSGVGSRSGLPTSVSLVGAPGAEWDLLAWGSALQEELGTVSP*
JGI10214J12806_100842811	3300000891	Soil	LPSGVGSRSGLPTSVSLVGAPGAEWDLLAWGSALQEELGTVSP*
JGI10216J12902_1015166502	3300000956	Soil	ALPAGIGRRSGLPVSVSLIGPPGADWDLLAAGTALQTELEPPTP*
Ga0062595_1024595022	3300004479	Soil	FPVVSLPSGVGKRSGLPTSVSLIGAPGADWDVLAWGTALQGELGTVSP*
Ga0066809_100703332	3300005168	Soil	SGVGSRSGLPTSVSLIGPPGAEWDLLAAGAALQDELGEVTPP*
Ga0070666_105498061	3300005335	Switchgrass Rhizosphere	PSGVGARSGLPVSVSLIGAHCTEWELLDWGAALQDRLGTVSPP*
Ga0070660_1004482831	3300005339	Corn Rhizosphere	PVVAFPSGVGSRSALPTGVSLIGAPGADWDLLAAGAALEAELRPMSYFGR*
Ga0070673_1013153161	3300005364	Switchgrass Rhizosphere	PSGLGRRSGLPTSVSLIGRPGADWDLLAAGAALQAELGTVSP*
Ga0070714_1006843641	3300005435	Agricultural Soil	GFPVVALPSGLGRASGLPTSVSLVGPAGADAALLGAGVALQRELGAPQPPP*
Ga0070663_1002738483	3300005455	Corn Rhizosphere	TGFPVVALPSGVGRRSGLPTSVSLIGAPGTEWDLLAWGAALQDRLGTVSP*
Ga0070662_1017749411	3300005457	Corn Rhizosphere	LPSGVGRHSGLPVSVSLIGAPGSDWDLLAWGAALQNELGTVAP*
Ga0070702_1011822241	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	GFPVVTLPSGVGRRSGLPVSVSLIGGPGSDWELLAWGVALQDELGTVAPA*
Ga0068852_1023445611	3300005616	Corn Rhizosphere	SALPTGVSLIGAPGADWDLLAAGAALEAELRPMSYFGR*
Ga0068864_1012266991	3300005618	Switchgrass Rhizosphere	HSGLPVSVSLIGPPGADWDLLEWGARLQDELGTVTPP*
Ga0066905_1001688093	3300005713	Tropical Forest Soil	FPVVALPSGVGSRSGLPVSVSLIGAPGSEWDLLGWGVALQEKLGTVSP*
Ga0075289_10764961	3300005888	Rice Paddy Soil	FPVVSLPSGVGRRSGLPVGVSLVGAPGADWDLLAWGAALQDELGTVAP*
Ga0075281_10862922	3300005897	Rice Paddy Soil	SGLPTSVSLIGRRGADWDLLAAGAALQAELGTVSP*
Ga0075273_100650891	3300005902	Rice Paddy Soil	GVGRRSGLPVSVSLVGAPGADWDLLAAGTALQAELGTVSP*
Ga0081455_104109741	3300005937	Tabebuia Heterophylla Rhizosphere	RSGLPVSVSLIGRPGSDWDLLAWGTALQDELGTVAPP*
Ga0066652_1005179653	3300006046	Soil	GLGRRSGLPTSVSLIGRPGSDWDLLAAGAALQAELGAVSP*
Ga0075026_1010298013	3300006057	Watersheds	PSGIGRRSGLPVGVSLIGPAGSDWDLLAAGAILQSTI*
Ga0074048_100714231	3300006581	Soil	GVGRRSGLPVSVSLIARPGADWDLLAWGAALQAKLGTVTP*
Ga0074063_133582511	3300006953	Soil	ALPSGTGSRSVLPTSVSLIGPPHAEWDLLAAGAALQAGLGTRAT*
Ga0099827_112962672	3300009090	Vadose Zone Soil	PSGVGRRSGLPVSVSLIGAPGADWDLLAAGAALQDELGTVAP*
Ga0111539_102181964	3300009094	Populus Rhizosphere	FPVVSLPSGVGSHSGLPVSVSLIGAPGADWDLLSWGAALQDELGTVSP*
Ga0105245_113577462	3300009098	Miscanthus Rhizosphere	VSLPSGVGTRSGLPTGVSVVGAPGAEWDLLAWGAALQNELGTVAP*
Ga0105245_114710472	3300009098	Miscanthus Rhizosphere	VVSLPSGVGTRSGLPTGVSVVGAPGAEWDLLAWGAALQAELGTVSP*
Ga0105245_130956711	3300009098	Miscanthus Rhizosphere	GLPTGVSLVGAPGADWDVLAWGAALQAELGTVAP*
Ga0075418_110014791	3300009100	Populus Rhizosphere	WTGFPVVCLPSGVGSRSGLPVSVSLIGRPHADWDLLAWGAALQDELGTVGPR*
Ga0075418_124933171	3300009100	Populus Rhizosphere	LPSGVGSRSGLPVSVSLIGRPHADWDLLAWGAALQDELGTVEP*
Ga0114129_113214942	3300009147	Populus Rhizosphere	RSGLPTSVSLIGRPGAEWDLLSWGKALQDKLGTVSP*
Ga0114129_119082872	3300009147	Populus Rhizosphere	SGVGQRSGLPVSASLIGAPGADWDLLAWGAALQDELGTVAP*
Ga0105243_118234222	3300009148	Miscanthus Rhizosphere	VSLPSGVGGRSGLPVGVSLIGRPGSEWDLLAWAAALQGELGVVSPP*
Ga0105248_111768111	3300009177	Switchgrass Rhizosphere	GLPVSVSLIGAHRTEWELLDWGAALQDRLGTVSPP*
Ga0105237_109197531	3300009545	Corn Rhizosphere	LPSGVGTRSGLPTSVSLIGAPGADWDVLAWGAALQAELGTVAP*
Ga0105249_105136981	3300009553	Switchgrass Rhizosphere	LPSGVGTRSGLPTGVSVVGAPGAEWDLLAWGAALQAELGTVSP*
Ga0105239_127949621	3300010375	Corn Rhizosphere	FPSGVGSRSALPTGVSLIGAPGADWDLLAAGAALEAELRPVSYFGR*
Ga0126381_1012828642	3300010376	Tropical Forest Soil	VGSRSGLPVSVSLIGAPGADWDLLAWGTALQAELGVPAP*
Ga0120167_10540571	3300012001	Permafrost	VVALPSGVGSRSGLPTSVSLIGPPHADWNLLAAGAELQTVLGIPAP*
Ga0137375_100420611	3300012360	Vadose Zone Soil	LPSGVGRRSGLPVSVSLIGAPGADWDLLAAGAALQDELGTVTP*
Ga0157308_101341521	3300012910	Soil	RSGLPTGVSLVGAPGAEWDLLAWGSALQAELGTVSP*
Ga0164241_100276456	3300012943	Soil	GFPVVALPSGVGTRSGLPTSVSLIGAPGADWDVLAWGMALQAELGTVAP*
Ga0164300_110343241	3300012951	Soil	GVGSRSGLPVSVSLVGAPGVEWDLLGWGAALQDELGTVSPQ*
Ga0126369_105169753	3300012971	Tropical Forest Soil	LPAGVGGRSGLPVSVSLVGRPGSDWDLLAAGAVLQSQLG*
Ga0164308_119690151	3300012985	Soil	PSGVGARSGLPVSVSLIGAPGADWDLLAMGAALQDELGRVTPP*
Ga0164307_105861101	3300012987	Soil	SGLPVSVSLIGAHCTDWELLDWGAALQDRLGTVSPP*
Ga0157373_103905092	3300013100	Corn Rhizosphere	WDWTGFPVVALPSGVGRRSGLPTSVSLIGAPGTEWDLLAWGAALQDRLGTVSP*
Ga0157372_130521682	3300013307	Corn Rhizosphere	FPVVSLPSGVGGRSGMPVGVSIVGGPGTEGRLLEMGIALQDELGVPEPPVR*
Ga0163163_109896131	3300014325	Switchgrass Rhizosphere	GVGRRSGLPTSVSLIGAPGTEWDLLAWGAALQDRLGTVSP*
Ga0182008_100453623	3300014497	Rhizosphere	LTYYWNWTGFPVVASPAGPGPRSGLPTSASLIGRPGADWDLLAWGGAAYGR*
Ga0173483_108121071	3300015077	Soil	RSGLPVSVSLIGAHCTEWELLDWGAALQDRLGTVSPP*
Ga0132255_1055829782	3300015374	Arabidopsis Rhizosphere	RSGLPVSVSLIGAPGSEWDLLDWGAALQDRLGTVSP*
Ga0182033_116349571	3300016319	Soil	RSGLPVSVSLIGAPGADWDLLAWGAALQEALGTVSP
Ga0187775_104138312	3300017939	Tropical Peatland	SGVGAETGLPVSVSLVGAPGSDWELLALGAALQDELGVPSPPLAS
Ga0190268_107092252	3300018466	Soil	VVALPSGVGGRSGLPVGVSLIARNHSETELLEMGIALQDELGVPEPPGF
Ga0173479_108054762	3300019362	Soil	PVVSLPSGLGSASRLPVSVSLIGPPGSEWDLLEWGSTLQAELGMIAP
Ga0206354_108801032	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	LGTRSGLPTSVSLIGPPGTEWDLLAAGTVLERELGPVSQ
Ga0210381_103207862	3300021078	Groundwater Sediment	PVVALPSGVGRLSGLPVSVSLIGAPGADWDLLAAGAALQDELGTVAP
Ga0247790_101550532	3300022915	Soil	LPSGVGRHSGLPVSVSLIGAPGSDWDLLAWGAALQNELGTVAP
Ga0247756_11326011	3300023078	Plant Litter	LPSGVGKRSGLPTSVSLIGAPGADWDVLAWGTALQADLGTVTP
Ga0247754_10466441	3300023102	Soil	GFPVVALPSGVGARSGLPTSVSLIGAPGADWDVLAWGTALQAELGTVSP
Ga0209751_101546524	3300025327	Soil	WDWTGFPVVALPSGVGRRSGLPVSVSLIGAPGADWDLLAAGAALQAELGTVAP
Ga0207688_104355192	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	ALPAGLGRRSGLPVGVSLVGRPGADWDLLAWGAALQDRLGTVSP
Ga0207671_107364111	3300025914	Corn Rhizosphere	LPSGVGTRSGLPTSVSLIGAPGADWDVLAWGAALQAELGTVAP
Ga0207657_109487092	3300025919	Corn Rhizosphere	RSGLPTSVSLIGPPGTEWDLLAAGTVLERELGPVSQ
Ga0207652_105059701	3300025921	Corn Rhizosphere	FPVVAFPSGVGSRSALPTGVSLIGAPGAEWDLLAAGAALEAELRPVSYLDR
Ga0207687_115490061	3300025927	Miscanthus Rhizosphere	VAFPSGVGSRSALPTGVSLIGAPGADWDVLAAGAALEAELRPMSYFGR
Ga0207690_106215051	3300025932	Corn Rhizosphere	VALPSGVGTRSGLPTSVSLIGAPGADWDVLAWGAALQAELGTVAP
Ga0207669_105086252	3300025937	Miscanthus Rhizosphere	RSGLPVSVSLIGAHCTEWELLDWGAALQDRLGTVSPP
Ga0207691_105360401	3300025940	Miscanthus Rhizosphere	GQRSGLPVGVSLIGAPGSDWDLLAAGAALQDELGTVEP
Ga0207691_110724611	3300025940	Miscanthus Rhizosphere	SGLPTGVSLIGAPGADWDVLAWGAALQAELGTVSP
Ga0207661_109340802	3300025944	Corn Rhizosphere	FPVVSLPSGVGTRSGLPTGVSVVGAPGAEWDLLAWGAALQAELGTVSP
Ga0207679_120866051	3300025945	Corn Rhizosphere	SLPSGVGTRSGLPTGVSLVGAPGAEWDLLAWGAALQAELGTVAP
Ga0207712_118986641	3300025961	Switchgrass Rhizosphere	SACRLPVSVSVIGAPGSEWDLLAWGAALQADLGTVSP
Ga0208527_10150881	3300025990	Rice Paddy Soil	SGLPVSVSLVGAPGADWDLLAAGTALQAELGTVSP
Ga0207678_102943093	3300026067	Corn Rhizosphere	IGSRSGLPTGVSLIGAPGADWDLLAAGATLEARLGPVPYAGR
Ga0207678_111006602	3300026067	Corn Rhizosphere	MHPDNTNGIPLIGAPGADWDVLAWGAALQAELGTVSP
Ga0207676_109703472	3300026095	Switchgrass Rhizosphere	SGVGRHSGLPVSVSLIGPPGADWDLLEWGARLQDELGTVTPP
Ga0207676_124298681	3300026095	Switchgrass Rhizosphere	RSGLPVSVSLIGAPGSEWDLLDWGAALQDRLGTVSP
Ga0207981_10447021	3300027560	Soil	PSGVGSRSGLPTSVSLIGPPGAEWDLLAAGAALQDELGEVTPP
Ga0209382_107678612	3300027909	Populus Rhizosphere	FPVVALPSGVGQRSGLPVSVSLIGAPGADWDLLAWGAQLQDELGTVAP
(restricted) Ga0233417_101053853	3300028043	Sediment	VLPSGVGSRSGLPVSVSLIGAPGADWDLLAWGAALQDRLGTVSP
Ga0268266_121754392	3300028379	Switchgrass Rhizosphere	WDWTGFPVVSLPSGVGGRSGMPVGVSIVGGPGTEGRLLEMGIALQDELGVPEPPVR
Ga0247822_106127971	3300028592	Soil	GFPVVSLPSGVGKRSGLPTSVSLIGAPGADWDVLAWGTALQGELGTVSP
Ga0307299_100796041	3300028793	Soil	SGLPVSVSLVGAQGADWDLLDWGAKLQDELGTVSPP
Ga0307503_104666321	3300028802	Soil	PVVALPSGIGSRSGLPASVSLIGPPNAEWDLLAAGSALQERLGTANLAAI
Ga0247824_106258111	3300028809	Soil	FPVVSLPSGVGTRSGLPTGVSLVGAPGAEWDLLAWGAGLQAELGTVSP
Ga0307289_100317121	3300028875	Soil	TGFPVVSLPSGVGRHSRLPVSVSLVGAPGADWDLLGWGAKLQDELGTVSPP
Ga0268386_100879331	3300030619	Soil	CLPSGVGSRSGLPVSVSLIGRPHADWDLLAWGAALQDELGTVEP
Ga0265327_105021831	3300031251	Rhizosphere	SGVGSRSGLPVSVSLVGAPGAEWDLLGWGGALQAELGTVSP
Ga0318516_100163236	3300031543	Soil	DWTGFPVVALPSGVGARSGLPVSVSLIGAPGADWDLLAWGAALQEALGTVSP
Ga0318560_102366991	3300031682	Soil	PSGVGSRSGLPVSVSMIGAPGTDWDLLAWGTALQDELGAPAP
Ga0318552_103165292	3300031782	Soil	PVVALPSGVGSRSGLPVSVSLVAAPGAEWDLLAWGASLQDELGVPST
Ga0318512_103545832	3300031846	Soil	PSGVGSRSGLPVSVSLVAAPGAEWDLLAWGASLQDELGVPST
Ga0310907_107133731	3300031847	Soil	LPSGVGARSGLPTSVSLIGAPGADWDVLAWGAALQAELGTVSP
Ga0310892_103779321	3300031858	Soil	PSGVGRRSGLPTSVSLIGAPGADWDVLAWGTALQVELGTVTP
Ga0306925_114351042	3300031890	Soil	GVGARSGLPVSVSLIGAPGADWDLLAWGAALQEALGTVSP
Ga0308174_105790781	3300031939	Soil	SRSGLPTSVSLIGPAGRDFDLLGAGVALESELGSVAA
Ga0310885_107743132	3300031943	Soil	PVVALPSGVGRRSGLPTSVSLIGAPGADWDVLAWGTALQVELGTVTP
Ga0308176_112638993	3300031996	Soil	FPSGVGSRSALPTGVSLIGAPGADWDLLAAGAALEAELRPMSYFGR
Ga0318553_106605161	3300032068	Soil	PSGVGSRSGLPVSVSLIGARGADWDLLAWGRSLEAALGSVTP
Ga0335085_120434382	3300032770	Soil	VALPSGVGSRSGLPASVSLIGPAGADWNLLAAGAALQAELGTVSP
Ga0335082_1000841912	3300032782	Soil	SGLPTSVSLIGARGADWDLLAWGSALEAELGEVTPP
Ga0335070_108583011	3300032829	Soil	AVALPSGTGPRSGLPASVSLIGPPGADWDLLAAGAALQDALG
Ga0335084_117840202	3300033004	Soil	GVGSRSGLPVSVSLIGAPGSDWELLAWGAALQANLDTVAP
Ga0335077_122066362	3300033158	Soil	VALPAGVGSRSGLPVSVSLIGAPGSDFDLLAWGSALERELGSVSPS
Ga0326726_112695121	3300033433	Peat Soil	GVGRRSGLPVSVSLIGAPGADWDLLAAGAALQDELGTVTP
Ga0314865_149692_498_620	3300033806	Peatland	RSGLPVGVSLVGPPGRDFDALAAGVELQGELGPIAAALPR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters