Basic Information | |
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Family ID | F087125 |
Family Type | Metagenome |
Number of Sequences | 110 |
Average Sequence Length | 50 residues |
Representative Sequence | MSENAAADYKMFDLRGIDWPEVSSSRTPSGIRVNADNSMACSAYTACI |
Number of Associated Samples | 84 |
Number of Associated Scaffolds | 110 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 100.00 % |
% of genes near scaffold ends (potentially truncated) | 99.09 % |
% of genes from short scaffolds (< 2000 bps) | 80.91 % |
Associated GOLD sequencing projects | 78 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.25 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (61.818 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (21.818 % of family members) |
Environment Ontology (ENVO) | Unclassified (50.909 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) (36.364 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72. |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 10.53% β-sheet: 2.63% Coil/Unstructured: 86.84% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.25 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Freshwater Freshwater Freshwater Lake Freshwater Lentic Freshwater Freshwater, Plankton Freshwater Lake Freshwater Lake Lake Freshwater, Surface Ice Aquatic Freshwater Aqueous Freshwater To Marine Saline Gradient Marine Estuarine Water Saline Water And Sediment Hypersaline Lake Sediment Sediment Marine Methane Seep Sediment Soil Fracking Water |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
B570J14230_100728882 | 3300001282 | Freshwater | MTENALADYRLYDLRGIDWPEVSSSRTPSGVRVNADNSMACSAYTACIRVISDAV |
GOScombined01_1026085582 | 3300002040 | Marine | MSTTDLSDYRMFDLRGIDWSIGGNRTPSGIRVTADNSMACSAYTACIRVISDAVSS |
GOScombined01_1047844402 | 3300002040 | Marine | MSTTDLSDYRIVDLRGIDWSIGGNRTPSGIRVTADNSMACSAYTACIRVISDAVSSLPLH |
B570J29598_1017732 | 3300002356 | Freshwater | MTENALADYRLYDLRGIDWPEVSSSRTPSGVRVNADNSMACSAYTACIRVISDAVSALPLHVFERLA |
B570J29617_10006901 | 3300002375 | Freshwater | MSENAAADFKMFDLRGIDWPEVSSSRTPSGIRVNADNSMACSAY |
B570J29623_10169702 | 3300002398 | Freshwater | MNENAVADYKMFDLRGIEWTESSSSRTPSGIRVNADNSMACSAYTACIRVISDAVSALPLHVY |
B570J29032_1090790401 | 3300002408 | Freshwater | MNENAVADYKMFDLRGIDWPEVSSSRTPSGVRVNAD |
B570J40625_1002638661 | 3300002835 | Freshwater | MTTENAVADYKMFDLRGIEWNDSTSNRTPAGIRVNADNSMACSAYTAC |
B570J40625_1003549212 | 3300002835 | Freshwater | MSETATNDYRMHELRGIDWGEMGGGRTSSGIRVNADTSMACSAYTACIRVIS |
B570J40625_1005125231 | 3300002835 | Freshwater | MNENAVADYKMFDLRGIEWTESSSSRTPSGIRVNADNSMACSAYTACIR |
B570J40625_1014600951 | 3300002835 | Freshwater | MSENAAADFKMLDLRGIEWHDMGGTRTASGIRVTADTSMACSAYTACIRVISDAVSSL |
Ga0074648_12218232 | 3300005512 | Saline Water And Sediment | MSTTDLSDYRMYDLRAIDWSVGGNRTPSGIRVTADNSMA |
Ga0068877_103797331 | 3300005525 | Freshwater Lake | MSEVLADHRMLELRGIDWPDVSSSRTPSGIRVTADNSMACSAYTA |
Ga0068876_100356074 | 3300005527 | Freshwater Lake | MSENALADFRMVDLRGIDWTEVSSNRTPSGVRVTADNSMACSAYTACI |
Ga0068872_100370774 | 3300005528 | Freshwater Lake | MSENALADFRMVDLRGIDWTEVSSNRTPSGVRVTADNSMACSAYTACIRVISDAVSSLPLHVY |
Ga0079957_11219021 | 3300005805 | Lake | MSEATEIAVPDFKMFDLRGIDWPDASTNRTPSGIRVNADNSMACSAYTACIR |
Ga0079957_12334262 | 3300005805 | Lake | MSTENAVADFKMFDLRGIEWTESSSSRTPSGIRVNADNSMACSAYTACIRVISDAVS |
Ga0075462_100977121 | 3300006027 | Aqueous | MSDELADYRMYDLRSVDWTGSNRTPSGVRVTADNSMACSAY |
Ga0075470_100308451 | 3300006030 | Aqueous | MSEHAASDYRMVDLRGIDWADMGGGRTASGVRVTAD |
Ga0075461_101062061 | 3300006637 | Aqueous | MSDELTDYRMYDLRSVDWAGSSRTPSGVRVTAENSMACSAYTACIRVISDAVSALPLHL |
Ga0070749_102170611 | 3300006802 | Aqueous | MSSLTDYRMHDVRSWDYDGFSHGRTPSGIRVNADNSMACSAYTACIRV |
Ga0070754_104723401 | 3300006810 | Aqueous | MSSLTDYRMHDVRSWDYDGFSHGRTPSGIRVNADNSMACSAYTACIRVISDAVSSLP |
Ga0070745_12818122 | 3300007344 | Aqueous | MSSLTDYRMHDVRSWDYDGFSHGRTPSGIRVNADNSMACSAYTACIRVISDAVS |
Ga0099849_11209721 | 3300007539 | Aqueous | MSSLTDYRMHDVRSWDYDGFSHGRTPSGIRVNADNSMACSAYTACIRVI |
Ga0070751_10865551 | 3300007640 | Aqueous | MSDELADYRMYDLRSVDWTGSNRTPSGVRVTADNSMACSAYTACIRVISDAVSALPLHLY |
Ga0099850_12911381 | 3300007960 | Aqueous | MSENGIADFKMYDLRGIEWTEVSSTRTPSGIRVNADNSMACSAYTAC |
Ga0075480_101534242 | 3300008012 | Aqueous | MSDELADYRMWDLRSVDWTGSNRTPSGVRVTADNSMACSAYTACIRV |
Ga0114346_10698982 | 3300008113 | Freshwater, Plankton | MSENAAADFKMIDLRGIDWPEVSPSRTPSGIRVNADNSMACSAYTAC |
Ga0114350_11903172 | 3300008116 | Freshwater, Plankton | MSENAAADFKMLDLRGIDWTESSGTRTPAGIRVTADNSMACSAYTACIRVISDA |
Ga0114363_10182091 | 3300008266 | Freshwater, Plankton | MSENAAADFKMIDLRGIDWPEVSPSRTPSGIRVNADNSMACSAYTACIRVISD |
Ga0114363_10357413 | 3300008266 | Freshwater, Plankton | MSETAAADFKMIDLRGIDWPEVSPSRTPSGIRVNADNSMACSAYTACIRVISD |
Ga0114363_10449271 | 3300008266 | Freshwater, Plankton | MSENALADYRMVDLRGIDWTEVSSNRTPSGVRVTADNSMACSAYTACIRVISDAVSSLPL |
Ga0114876_10536271 | 3300008448 | Freshwater Lake | MSENAAADFKMIDLRGIDWPEVSPSRTPSGIRVNADNSMAC |
Ga0114880_10204521 | 3300008450 | Freshwater Lake | MSENAAADFKMIDLRGIDWPEVSPSRTPSGIRVNADN |
Ga0118687_101664961 | 3300009124 | Sediment | MSATDLNDYRMYDLRAIDWSVGGNRTPSGIRVTADNSMACSAYTACIRVISDAVSALPLHIYE |
Ga0114980_100830511 | 3300009152 | Freshwater Lake | MSENAVHDWKMIDLRGVDWTESSNRTPSGIRVTADNSMACSAYTACIRVISDA |
Ga0114968_102504152 | 3300009155 | Freshwater Lake | MSENAVHDWKMIDLRGVDWTEGSNRTPSGIRVTADNSMACS |
Ga0114979_105428212 | 3300009180 | Freshwater Lake | MSEQATQEWKMIDLRGTDWTEGSSRTPSGVRVTPESSLMCSAFL |
Ga0129345_10644961 | 3300010297 | Freshwater To Marine Saline Gradient | MSDELADYRMWDLRSVDWTGSNRTPSGVRVTADNSMACSAYTACIRVIS |
Ga0129342_11832401 | 3300010299 | Freshwater To Marine Saline Gradient | MSTTDLSDYRMYDLRAIDWSIGGNRTPSGIRVTADNSMACSAYTACIRVISDAVS |
Ga0129351_10738632 | 3300010300 | Freshwater To Marine Saline Gradient | MSDELADYRMWDLRSVDWTGSNRTPSGVRVTADNSM |
Ga0136549_100495983 | 3300010389 | Marine Methane Seep Sediment | MSTTDLNDYRMYDLRGIDWSMSSNRTPSGIRVTADNSMACSAYTACIRVISDAVSALPLH |
Ga0157498_10246651 | 3300012666 | Freshwater, Surface Ice | MNENAVADYKMFDLRGIDWPEVSPSRTPSGVRVNADNSMACSAYTACIRVISDAVSA |
Ga0157498_10647081 | 3300012666 | Freshwater, Surface Ice | MSENAAADYKMFDLRGIDWPEVSSSRTPSGIRVNADNSMACSAY |
Ga0180437_104063341 | 3300017963 | Hypersaline Lake Sediment | MSTADLSDYRMYDLRGIDWSIGGNRTPSGIRVTADNSMACSAYTACIRVISDAVSALPLHIYER |
Ga0180438_102492012 | 3300017971 | Hypersaline Lake Sediment | MSSLTDYRMHDVRSWDYDGFSHGRTPSGIRVNADNSMACSAYTACIRVIS |
Ga0180432_102455581 | 3300017989 | Hypersaline Lake Sediment | MSSLTDYRMHDVRSWDYDGFSHGRTPSGIRVNADNSMACSAYTACIRVISDAVSSLPLHL |
Ga0180433_101726952 | 3300018080 | Hypersaline Lake Sediment | VSTDVSDYRMYDLRSVDWAGSSRTPSGIRVTADSSMACSAYTACIRVISDAVSSLPL |
Ga0208594_10088063 | 3300020509 | Freshwater | MSENAAANFKMFDLRGIDWPEVSPSRTPSGIRVNADNSMACSAYTACIRVISD |
Ga0208594_10335812 | 3300020509 | Freshwater | MNENAVADYKMFDLRGIDWPEVSSSRTPSGVRVNADNSMACSAYTA |
Ga0208482_10307271 | 3300020521 | Freshwater | MSENAAADFKMFDLRGIDWPEVSSSRTPSGIRVNA |
Ga0208364_10074072 | 3300020533 | Freshwater | MNENAVADYKMFDLRGIDWPEVSSSRTPSGVRVNADNSMACSAYTACIRVISDAVSALPLHVFERLAN |
Ga0208486_10039441 | 3300020556 | Freshwater | MNENAVADYKMFDLRGIDWPEVSSSRTPSGVRVNADNSMACSAYTACIRVISDAVSALPLHVFERLANGG |
Ga0208719_10665151 | 3300020564 | Freshwater | MNKNAVADYKMFDLRGIDWPEVSSSRTPSGVRVNADNSMACSAYTACIRVISDAVSALPLHVFERL |
Ga0208465_10023946 | 3300020570 | Freshwater | MTIENAVADYKMFDLRGIDWPEVSSSRTPSGVRVNA |
Ga0208465_10044021 | 3300020570 | Freshwater | MSEHAAADFKMFDLRGIDWPEVSSSRTPSGIRVNAD |
Ga0208465_10158902 | 3300020570 | Freshwater | MTTENAVADYKMFDLRGIEWNDSTSNRTPAGIRVNADNSMACSAYTACIRVISDAVS |
Ga0208465_10423201 | 3300020570 | Freshwater | MTIENAVADYKMFDLRGIDWPEVSPSRTPSGVRVNADNSMACS |
Ga0222713_102683092 | 3300021962 | Estuarine Water | MTENALADYRMYDLRGIDWPEVSPSRTPSGIRVNADNSMACSAYTACIR |
Ga0212028_10676942 | 3300022071 | Aqueous | MSSLTDYRMHDVRSWDYDGFSHGRTPSGIRVNADNSMACSAYTACIRVISD |
Ga0214923_101611601 | 3300023179 | Freshwater | MSETATDFRMHELRGIDWSEMGGSRTASGIRVNADTSMACSAYTACIRVISDS |
Ga0208795_10584831 | 3300025655 | Aqueous | MSDELADYRMYDLRSVDWTGSNRTPSGVRVTADNSMACSAYTACIRVISDAVSA |
Ga0208150_10849342 | 3300025751 | Aqueous | MSSLTDYRMHDVRSWDYDGFSHGRTPSGIRVNADNSMACSAYTACIRVISDAV |
Ga0208542_10485431 | 3300025818 | Aqueous | MSDELADYRMWDLRSVDWTGSNRTPSGVRVTADNSMACSAYTACIRVISDAVSALPLHLYERL |
Ga0208645_12473152 | 3300025853 | Aqueous | MSDELADYRMWDLRSVDWTGSNRTPSGVRVTADNSMACSAYTACIRVISDA |
Ga0208783_102803091 | 3300025872 | Aqueous | MSDLLADHRMLELRGIEWNDVGSSRTPSGIRVTADNSMACSAYTACIRVISDAVSSLPLH |
Ga0208644_11135722 | 3300025889 | Aqueous | MSTTDLSDYRMYDLRAIDWSVGGNRTPSGIRVTADNSMACSAYTACIRVISDAVSALPLHIYERLP |
Ga0208644_12811171 | 3300025889 | Aqueous | MSDELADYRMWDLRSVDWTGSNRTPSGVRVTADNS |
Ga0208974_11335981 | 3300027608 | Freshwater Lentic | MSENAAADFKMIDLRGIDWPEVSPSRTPSGIRVNADNSMACSAYTACIRVISDAVSA |
Ga0209990_103628621 | 3300027816 | Freshwater Lake | MSEVLADHRMLELRGIDWPDVSSSRTPSGIRVTADNSMACSAYTACIR |
Ga0209400_11279451 | 3300027963 | Freshwater Lake | MSENAVHDWKMIDLRGVDWTEGSNRTPSGIRVTADNSMACSA |
Ga0119945_10035523 | 3300029933 | Aquatic | MSDILADHRMLELRAVEWNDAGGSRTPSGIRVTADNSMACSAYTACIRVISDAV |
Ga0307380_103063292 | 3300031539 | Soil | MSDLADYRMYDLRSVDWTASSNRTPSGVRVTADNSMACS |
Ga0315907_102098512 | 3300031758 | Freshwater | MNTENAVADYKMFDLRGVEWTESASNRTPAGVRVNADNS |
Ga0315907_103212151 | 3300031758 | Freshwater | MSENALADYRMVDLRGIDWTEVSSNRTPSGVRVTADNSMACSA |
Ga0315900_100868681 | 3300031787 | Freshwater | MSENALADFRMVDLRGIDWTEVSSNRTPSGVRVTADNSMACSAYTACIRVI |
Ga0315900_102237521 | 3300031787 | Freshwater | MSENALADYRMVDLRGIDWTEVSSNRTPSGVRVTADNSMACSAYTACIRVI |
Ga0315909_101207543 | 3300031857 | Freshwater | MSEVLADHRMLELRGIDWPDVSSSRTPSGIRVTADNSMACSAYTACIRVI |
Ga0315909_101283141 | 3300031857 | Freshwater | MSENAAADFKMIDLRGIDWPEVSPSRTPSGIRVNAD |
Ga0315909_101896012 | 3300031857 | Freshwater | MNENAVADYKMFDLRGIDWPEVSPSRTPSGVRVNADNSMAC |
Ga0315906_106059191 | 3300032050 | Freshwater | MSENALADYRMVDLRGIDWTEVSSNRTPSGVRVTADNSMACSAY |
Ga0315905_100864691 | 3300032092 | Freshwater | MSEVLADHRMLELRGIDWPDVSSSRTPSGIRVTADNSMACSAYTACIRVISDAVSS |
Ga0334994_0111024_3_134 | 3300033993 | Freshwater | MSETATNDYRMHELRGIDWGEMGGGRTSSGIRVNADTSMACSAY |
Ga0334979_0168684_1_126 | 3300033996 | Freshwater | MSENAAADFKMIDLRGIEWHGDGGSRTPSGIRVTADNSMACS |
Ga0334986_0208625_963_1085 | 3300034012 | Freshwater | MSETEQAVADFRMIDLRGIDWPEVSPSRTPSGIRVNADNSM |
Ga0334998_0199060_3_134 | 3300034019 | Freshwater | MTIENAVADYKMFDLRGIDWPEVSSSRTPSGVRVNADNSMACSA |
Ga0335002_0615867_2_139 | 3300034020 | Freshwater | MSENAAADFKMFDLRGIDWPEVSPSRTPSGIRVNADNSMACSAYTA |
Ga0335000_0109051_1684_1881 | 3300034063 | Freshwater | MSEHAAADFKMFDLRGIDWPEVSSSRTPSGIRVNADNSMACSAYTACIRVISDAVSALPLHVYERM |
Ga0335028_0381887_620_808 | 3300034071 | Freshwater | MTTENAVADYKMFDLRGIEWNDSTSNRTPAGVRVNADNSMACSAYTACIRVISDAVSALPLHV |
Ga0310130_0041080_1210_1398 | 3300034073 | Fracking Water | MSTLTDYRMHELRHWDYDGHTSNLTPSGIRVNADNSMACSAYTACIRVISDAVSSLPLHLFER |
Ga0335025_0171672_1051_1245 | 3300034096 | Freshwater | MSENAAADFKMFDLRGIDWPEVSSSRTPSGIRVNADNSMACSAYTACIRVISDAVSALPLHIYER |
Ga0335031_0035653_3484_3615 | 3300034104 | Freshwater | MNKNAVADYKMFDLRGIDWPEVSSSRTPSGVRVNADNSMACSAY |
Ga0335031_0087994_3_134 | 3300034104 | Freshwater | MNENAVADYKMFDLRGIDWPEVSSSRTPSGVRVNADNSMACSAY |
Ga0335031_0424275_3_167 | 3300034104 | Freshwater | MNENATDYRMLELRGIEWNEANSNRTPSGIRVNADNSMACSAYTACIRVISDAVS |
Ga0335031_0544205_536_694 | 3300034104 | Freshwater | MSENAAADFKMLDLRGIEWHDMGGTRTASGIRVTADTSMACSAYTACIRVISD |
Ga0335051_0128063_1119_1304 | 3300034109 | Freshwater | MNENAVADYKMFDLRGIEWTESSSSRTPSGIRVNADNSMACSAYTACIRVISDAVSALPLHV |
Ga0335051_0267385_1_168 | 3300034109 | Freshwater | MSEHAAADFKMFDLRGIDWSEVSSNRTPSGIRVTADNSMACSAYTACIRVISDAVS |
Ga0335066_0028395_3_173 | 3300034112 | Freshwater | MNENAVADYKMFDLRGIDWPEVSSSRTPSGVRVNADNSMACSAYTACIRVISDAVSA |
Ga0335066_0057291_3_107 | 3300034112 | Freshwater | MTIENAVADYKMFDLRGIDWPEVSSSRTPSGVRVN |
Ga0335066_0083424_2_151 | 3300034112 | Freshwater | MSETEQAVADFRMIDLRGIDWPEVSPSRTPSGIRVNADNSMACSAYTACI |
Ga0335066_0632676_3_188 | 3300034112 | Freshwater | MSENAADFRMFDLRGIDWPEVSSSRTPSGIRVNADNSMACSAYTACIRVISDAVSALPLHVY |
Ga0335068_0148623_3_137 | 3300034116 | Freshwater | MSENAAADYKMFDLRGIDWPEVSPSRTPSGIRVNADNSMACSAYT |
Ga0335053_0346983_772_915 | 3300034118 | Freshwater | MSENAAADYKMFDLRGIDWPEVSSSRTPSGIRVNADNSMACSAYTACI |
Ga0335060_0165308_3_140 | 3300034122 | Freshwater | MSENAADFRMFDLRGIDWPEVSPSRTPSGIRVNADNSMACSAYTAC |
Ga0335060_0532670_437_598 | 3300034122 | Freshwater | MSETATNDYRMHELRGIDWSEMGGGRTSSGIRVNADTSMACSAYTACIRVISDS |
Ga0335052_0026885_3434_3589 | 3300034279 | Freshwater | MSENAADFRMFDLRGIDWPEVSPSRTPSGIRVNADNSMACSAYTACIRVISD |
Ga0348335_106725_1_132 | 3300034374 | Aqueous | MSDELADYRMWDLRSVDWTGSNRTPSGVRVTADNSMACSAYTAC |
Ga0348336_088748_2_151 | 3300034375 | Aqueous | MSDELADYRMWDLRSVDWTGSNRTPSGVRVTADNSMACSAYTACIRVISD |
Ga0348336_131490_3_128 | 3300034375 | Aqueous | MSDELADYRMWDLRSVDWTGSNRTPSGVRVTADNSMACSAYT |
Ga0348337_052147_1_141 | 3300034418 | Aqueous | MSSLTDYRMHDVRSWDYDGFSHGRTPSGIRVNADNSMACSAYTACIR |
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