NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F087025

Metagenome Family F087025

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F087025
Family Type Metagenome
Number of Sequences 110
Average Sequence Length 63 residues
Representative Sequence MKTLNVHFINSGWGNDHGTRAADLVELTVDTLGKPVAKITNPFDYYTAELTAVFLNDEWVCDLD
Number of Associated Samples 91
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 87.27 %
% of genes near scaffold ends (potentially truncated) 20.00 %
% of genes from short scaffolds (< 2000 bps) 90.91 %
Associated GOLD sequencing projects 87
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (98.182 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(20.000 % of family members)
Environment Ontology (ENVO) Unclassified
(75.455 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(94.545 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 53.12%    Coil/Unstructured: 46.88%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 110 Family Scaffolds
PF01844HNH 19.09
PF03237Terminase_6N 0.91



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A98.18 %
All OrganismsrootAll Organisms1.82 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10100715Not Available1201Open in IMG/M
3300000101|DelMOSum2010_c10148959Not Available862Open in IMG/M
3300000101|DelMOSum2010_c10179886Not Available734Open in IMG/M
3300000101|DelMOSum2010_c10244730Not Available568Open in IMG/M
3300000101|DelMOSum2010_c10244999Not Available568Open in IMG/M
3300000115|DelMOSum2011_c10069682Not Available1275Open in IMG/M
3300000116|DelMOSpr2010_c10223938Not Available588Open in IMG/M
3300000117|DelMOWin2010_c10091001Not Available1151Open in IMG/M
3300001346|JGI20151J14362_10173133Not Available618Open in IMG/M
3300001589|JGI24005J15628_10102401Not Available959Open in IMG/M
3300001589|JGI24005J15628_10136783Not Available764Open in IMG/M
3300001589|JGI24005J15628_10174605Not Available627Open in IMG/M
3300001589|JGI24005J15628_10182150Not Available605Open in IMG/M
3300004460|Ga0066222_1205786Not Available876Open in IMG/M
3300004461|Ga0066223_1414258Not Available522Open in IMG/M
3300004829|Ga0068515_128221Not Available702Open in IMG/M
3300005941|Ga0070743_10068131Not Available1205Open in IMG/M
3300006737|Ga0098037_1234902Not Available591Open in IMG/M
3300006810|Ga0070754_10073762Not Available1737Open in IMG/M
3300006920|Ga0070748_1279966Not Available596Open in IMG/M
3300006924|Ga0098051_1070059Not Available954Open in IMG/M
3300007229|Ga0075468_10055539Not Available1334Open in IMG/M
3300007540|Ga0099847_1093064Not Available921Open in IMG/M
3300007548|Ga0102877_1127592Not Available722Open in IMG/M
3300007554|Ga0102820_1021424Not Available1592Open in IMG/M
3300007681|Ga0102824_1216020Not Available507Open in IMG/M
3300007716|Ga0102867_1208018Not Available539Open in IMG/M
3300007863|Ga0105744_1050737Not Available1024Open in IMG/M
3300007864|Ga0105749_1188200Not Available502Open in IMG/M
3300007972|Ga0105745_1090124Not Available892Open in IMG/M
3300008961|Ga0102887_1108660Not Available873Open in IMG/M
3300009024|Ga0102811_1290560Not Available612Open in IMG/M
3300009049|Ga0102911_1073066Not Available991Open in IMG/M
3300009050|Ga0102909_1141021Not Available580Open in IMG/M
3300009052|Ga0102886_1171292Not Available644Open in IMG/M
3300009071|Ga0115566_10162774Not Available1384Open in IMG/M
3300009077|Ga0115552_1410282Not Available534Open in IMG/M
3300009079|Ga0102814_10621865Not Available592Open in IMG/M
3300009086|Ga0102812_10330304Not Available829Open in IMG/M
3300009142|Ga0102885_1129074Not Available614Open in IMG/M
3300009193|Ga0115551_1158721Not Available1033Open in IMG/M
3300009193|Ga0115551_1195106Not Available912Open in IMG/M
3300009422|Ga0114998_10299076Not Available754Open in IMG/M
3300009423|Ga0115548_1112238Not Available880Open in IMG/M
3300009435|Ga0115546_1234587Not Available630Open in IMG/M
3300009440|Ga0115561_1268690Not Available634Open in IMG/M
3300009445|Ga0115553_1081180Not Available1412Open in IMG/M
3300009447|Ga0115560_1075382Not Available1429Open in IMG/M
3300009449|Ga0115558_1156893Not Available959Open in IMG/M
3300009476|Ga0115555_1111407Not Available1168Open in IMG/M
3300009507|Ga0115572_10127409Not Available1507Open in IMG/M
3300010149|Ga0098049_1263514Not Available523Open in IMG/M
3300010150|Ga0098056_1051096Not Available1430Open in IMG/M
3300010368|Ga0129324_10042534Not Available2108Open in IMG/M
3300011252|Ga0151674_1001732Not Available552Open in IMG/M
3300011254|Ga0151675_1031321Not Available731Open in IMG/M
3300012953|Ga0163179_11995462Not Available534Open in IMG/M
3300017706|Ga0181377_1043055Not Available888Open in IMG/M
3300017706|Ga0181377_1060702Not Available702Open in IMG/M
3300017710|Ga0181403_1068550Not Available738Open in IMG/M
3300017710|Ga0181403_1101783Not Available600Open in IMG/M
3300017710|Ga0181403_1121968Not Available544Open in IMG/M
3300017714|Ga0181412_1054038Not Available1012Open in IMG/M
3300017729|Ga0181396_1079381Not Available662Open in IMG/M
3300017733|Ga0181426_1016255Not Available1459Open in IMG/M
3300017745|Ga0181427_1101339Not Available703Open in IMG/M
3300017749|Ga0181392_1021073Not Available2083Open in IMG/M
3300017752|Ga0181400_1039789Not Available1486Open in IMG/M
3300017758|Ga0181409_1105185Not Available840Open in IMG/M
3300017759|Ga0181414_1100163Not Available762Open in IMG/M
3300017764|Ga0181385_1231253Not Available556Open in IMG/M
3300017765|Ga0181413_1253280Not Available518Open in IMG/M
3300017779|Ga0181395_1141200Not Available761Open in IMG/M
3300020165|Ga0206125_10212403Not Available750Open in IMG/M
3300020169|Ga0206127_1286273Not Available554Open in IMG/M
3300020185|Ga0206131_10085319Not Available1883Open in IMG/M
3300020185|Ga0206131_10406595Not Available566Open in IMG/M
3300020352|Ga0211505_1037082Not Available1220Open in IMG/M
3300020352|Ga0211505_1081571Not Available776Open in IMG/M
3300020388|Ga0211678_10382098Not Available562Open in IMG/M
3300020428|Ga0211521_10050505Not Available2152Open in IMG/M
3300020438|Ga0211576_10053830Not Available2294Open in IMG/M
3300020438|Ga0211576_10292218Not Available849Open in IMG/M
3300021185|Ga0206682_10040882Not Available2629Open in IMG/M
3300021375|Ga0213869_10036104Not Available2658Open in IMG/M
3300021375|Ga0213869_10109133Not Available1336Open in IMG/M
3300021389|Ga0213868_10340359Not Available847Open in IMG/M
3300021957|Ga0222717_10002680All Organisms → cellular organisms → Bacteria13620Open in IMG/M
(restricted) 3300023109|Ga0233432_10022102Not Available4596Open in IMG/M
(restricted) 3300023109|Ga0233432_10388529Not Available614Open in IMG/M
(restricted) 3300023109|Ga0233432_10490227Not Available516Open in IMG/M
3300024348|Ga0244776_10377325Not Available947Open in IMG/M
3300025084|Ga0208298_1107457Not Available502Open in IMG/M
3300025098|Ga0208434_1018182Not Available1795Open in IMG/M
3300025137|Ga0209336_10112926Not Available753Open in IMG/M
3300025138|Ga0209634_1010813All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Puniceicoccales → Puniceicoccaceae → unclassified Puniceicoccaceae → Puniceicoccaceae bacterium5501Open in IMG/M
3300025138|Ga0209634_1196107Not Available777Open in IMG/M
3300025138|Ga0209634_1217285Not Available717Open in IMG/M
3300025168|Ga0209337_1311233Not Available563Open in IMG/M
3300025570|Ga0208660_1050062Not Available1045Open in IMG/M
3300025676|Ga0209657_1136499Not Available706Open in IMG/M
3300025806|Ga0208545_1022141Not Available2143Open in IMG/M
3300025830|Ga0209832_1107880Not Available870Open in IMG/M
3300025897|Ga0209425_10208690Not Available1037Open in IMG/M
3300027788|Ga0209711_10194150Not Available940Open in IMG/M
3300027813|Ga0209090_10164326Not Available1164Open in IMG/M
3300029787|Ga0183757_1033399Not Available1050Open in IMG/M
3300031569|Ga0307489_10385783Not Available929Open in IMG/M
3300031621|Ga0302114_10079683Not Available1544Open in IMG/M
3300031627|Ga0302118_10089112Not Available1545Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine20.00%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater12.73%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine11.82%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine11.82%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine7.27%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine6.36%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous5.45%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater3.64%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater2.73%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater2.73%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water2.73%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine1.82%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine1.82%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine1.82%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.91%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine0.91%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient0.91%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.91%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater0.91%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine0.91%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water0.91%
Marine WaterEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine Water0.91%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000115Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011EnvironmentalOpen in IMG/M
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300001346Pelagic Microbial community sample from North Sea - COGITO 998_met_01EnvironmentalOpen in IMG/M
3300001589Marine viral communities from the Pacific Ocean - LP-40EnvironmentalOpen in IMG/M
3300004460Marine viral communities from Newfoundland, Canada BC-1EnvironmentalOpen in IMG/M
3300004461Marine viral communities from Newfoundland, Canada BC-2EnvironmentalOpen in IMG/M
3300004829Marine water microbial communities from the Pohang Bay, Korea with extracellular vesicles - Pohang-EVsEnvironmentalOpen in IMG/M
3300005941Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697EnvironmentalOpen in IMG/M
3300006737Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaGEnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300006924Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaGEnvironmentalOpen in IMG/M
3300007229Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007548Estuarine microbial communities from the Columbia River estuary - metaG 1548B-3EnvironmentalOpen in IMG/M
3300007554Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.709EnvironmentalOpen in IMG/M
3300007681Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.753EnvironmentalOpen in IMG/M
3300007716Estuarine microbial communities from the Columbia River estuary - metaG 1546B-3EnvironmentalOpen in IMG/M
3300007863Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1459B_0.2umEnvironmentalOpen in IMG/M
3300007864Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461B_3.0umEnvironmentalOpen in IMG/M
3300007972Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460ABC_3.0umEnvironmentalOpen in IMG/M
3300008961Estuarine microbial communities from the Columbia River estuary - metaG 1550B-02EnvironmentalOpen in IMG/M
3300009024Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.705EnvironmentalOpen in IMG/M
3300009049Estuarine microbial communities from the Columbia River estuary - metaG 1558A-02EnvironmentalOpen in IMG/M
3300009050Estuarine microbial communities from the Columbia River estuary - metaG 1557A-02EnvironmentalOpen in IMG/M
3300009052Estuarine microbial communities from the Columbia River estuary - metaG 1550A-02EnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009077Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328EnvironmentalOpen in IMG/M
3300009079Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741EnvironmentalOpen in IMG/M
3300009086Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713EnvironmentalOpen in IMG/M
3300009142Estuarine microbial communities from the Columbia River estuary - metaG 1550B-3EnvironmentalOpen in IMG/M
3300009193Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321EnvironmentalOpen in IMG/M
3300009422Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138EnvironmentalOpen in IMG/M
3300009423Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423EnvironmentalOpen in IMG/M
3300009435Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413EnvironmentalOpen in IMG/M
3300009440Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512EnvironmentalOpen in IMG/M
3300009445Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331EnvironmentalOpen in IMG/M
3300009447Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509EnvironmentalOpen in IMG/M
3300009449Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426EnvironmentalOpen in IMG/M
3300009476Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407EnvironmentalOpen in IMG/M
3300009507Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607EnvironmentalOpen in IMG/M
3300010149Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaGEnvironmentalOpen in IMG/M
3300010150Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaGEnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300011252Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_4, permeateEnvironmentalOpen in IMG/M
3300011254Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_1, 0.02EnvironmentalOpen in IMG/M
3300012953Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 MetagenomeEnvironmentalOpen in IMG/M
3300017706Marine viral communities from the Subarctic Pacific Ocean - Lowphox_13 viral metaGEnvironmentalOpen in IMG/M
3300017710Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28EnvironmentalOpen in IMG/M
3300017714Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15EnvironmentalOpen in IMG/M
3300017729Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 19 SPOT_SRF_2011-01-11EnvironmentalOpen in IMG/M
3300017733Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 49 SPOT_SRF_2013-12-23EnvironmentalOpen in IMG/M
3300017745Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 50 SPOT_SRF_2014-01-15EnvironmentalOpen in IMG/M
3300017749Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15EnvironmentalOpen in IMG/M
3300017752Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 23 SPOT_SRF_2011-06-22EnvironmentalOpen in IMG/M
3300017758Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30EnvironmentalOpen in IMG/M
3300017759Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28EnvironmentalOpen in IMG/M
3300017764Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11EnvironmentalOpen in IMG/M
3300017765Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28EnvironmentalOpen in IMG/M
3300017779Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 18 SPOT_SRF_2010-12-16EnvironmentalOpen in IMG/M
3300020165Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1EnvironmentalOpen in IMG/M
3300020169Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160419_1EnvironmentalOpen in IMG/M
3300020185Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1EnvironmentalOpen in IMG/M
3300020352Marine microbial communities from Tara Oceans - TARA_B100000497 (ERX556084-ERR599144)EnvironmentalOpen in IMG/M
3300020388Marine microbial communities from Tara Oceans - TARA_B100001063 (ERX555965-ERR599064)EnvironmentalOpen in IMG/M
3300020428Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)EnvironmentalOpen in IMG/M
3300020438Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)EnvironmentalOpen in IMG/M
3300021185Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015EnvironmentalOpen in IMG/M
3300021375Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132EnvironmentalOpen in IMG/M
3300021389Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300023109 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MGEnvironmentalOpen in IMG/M
33000243480.2um to 3um size fraction coassemblyEnvironmentalOpen in IMG/M
3300025084Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025098Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025137Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300025570Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025676Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_100m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025806Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025830Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407 (SPAdes)EnvironmentalOpen in IMG/M
3300025897Pelagic Microbial community sample from North Sea - COGITO 998_met_05 (SPAdes)EnvironmentalOpen in IMG/M
3300027788Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 (SPAdes)EnvironmentalOpen in IMG/M
3300027813Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 (SPAdes)EnvironmentalOpen in IMG/M
3300029787Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172EnvironmentalOpen in IMG/M
3300031569Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 1.2EnvironmentalOpen in IMG/M
3300031621Marine microbial communities from Western Arctic Ocean, Canada - AG5_SurfaceEnvironmentalOpen in IMG/M
3300031627Marine microbial communities from Western Arctic Ocean, Canada - AG5_33.1EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1010071513300000101MarineNSGWGNDHGTRAADLVELTVDTLGKPVAKITNPFDYYTAELTAVFLNDEWICDLD*
DelMOSum2010_1014895913300000101MarineMNIIDVHFINSGWGNDHGKRAADLVNLTIDPMGKPVATIKNPFDYYTAELTAVFLNDEWICDLD*
DelMOSum2010_1017988623300000101MarineMKTLNVHFINTGWGNDHGVREAELLEITVNEAGTPIAKIRNPFNYYTAELTARFLNTEWVCDLD*
DelMOSum2010_1024473023300000101MarineMKTLNVHFINSGWGNDHGVREVELLEITVNEAGTPIAKITNPFDYYTAELTARFLNTEWVCDLD*
DelMOSum2010_1024499933300000101MarineMTTLNVHFINSGWGNDHGTRAADLVELTVDTLGKPVAKITNPFDYYTAELTAVFLNDEW
DelMOSum2011_1006968233300000115MarineMKTLNVHFINSGWGNDHGVREAELLEITVNQAGTPIAKISNPFNYYTAELTARFLNTEWVCDLD*
DelMOSpr2010_1022393813300000116MarineMTTLNVHFINSGWGNDHGTRAADLVELTVDTLGKPVAKITNPFDYYTAELTAVFL
DelMOWin2010_1009100143300000117MarineMTTLNVHFINSGWGNDHGTRAADLVELTVDTLGKPVAKITNPFDYYTAELTAVF
JGI20151J14362_1017313313300001346Pelagic MarineMTTLNVHFINSGWGNDHGTRAADLVELTVDTLGKPVAKITNPFDYYTAELTAVFLNDEWI
JGI24005J15628_1010240113300001589MarineMKTLNVHFINSGWGNDHGVREAELLEITVNEAGTPIAKITNPFNYYTAELTARFLNTEWVCDLD*
JGI24005J15628_1013678323300001589MarineMKTLNVQFINSGWGNDHGVREVELLEITVNEAGTPIAKITNPFNYYTAELTARFLNTEWVCDLD*
JGI24005J15628_1017460523300001589MarineMKTLNVHFINTGWGNDHGTRAADLVELTVDTLGKPVAKISNPFNYYTAELTAVFLNDEWVCDLD*
JGI24005J15628_1018215013300001589MarineMNIIDVHFINSGWGNDHGTRAADLVELTIDPMGKPVATIKNPFDYYTAELTAVFLNDEWVCDLD*
Ga0066222_120578623300004460MarineMTTLNVHFINSGWGNDHGTRAADLVELTVDTMGKPVAKITNPFDYYTAELTAVFLNDEWICDLD*
Ga0066223_141425813300004461MarineMTTLNVHFINSGWGNDHGTRAADLVELTVDTLGTPVAKITNPFDYYTAELTARFLNTEWVCDLD*
Ga0068515_12822123300004829Marine WaterMKTLNVQFINSGWGNDHGVREVELLDITVNEAGTPIAKITNPFNYYTAELTARFLNTE
Ga0070743_1006813113300005941EstuarineMTTLNVHFINSGWGNDHGTRAADLVELTVDTLGKPVAKITNPFDYYTAELTAVFLNDEWICDLD*
Ga0098037_123490223300006737MarineMKTINVHFINSGWGNDHGLYEVDLVELTVDTLGKPVAKITNPFDNYTAGLTAVFLNDEWVCDLN*
Ga0070754_1007376253300006810AqueousMKTLNVHFINTGWGNDHGVREAELLEITVNEAGTPIAKIRNPFNYYTAELTARFLNTEWVCELD*
Ga0070748_127996613300006920AqueousLNVHFINSGWGNDHGTRAADLVELTVDTLGKPVAKITNPFDYYTAELTAVFLNDEWICDLD*
Ga0098051_107005923300006924MarineMKTINVHFINSGWGNDHGLYEVDLVELTVDTLGKPVAKITNPFDNYTAGLIAVFLNDEWVCDLD*
Ga0075468_1005553933300007229AqueousMKTLNVHFINSGWGNDHGTRAADLVELTIDPMGKPVAKITNPFDYYTAELTAVFLNDEWICDLD*
Ga0099847_109306413300007540AqueousGNDHGVREVELLEITVNEAGTPVAKITNPFDYYTAELTARFLNTEWVCDLD*
Ga0102877_112759213300007548EstuarineMATLNVHFINSGWGNDHGTRAADLVELTVDTMGKPVAKITNPFDYYTAELTAVFLNDEWICDLD*
Ga0102820_102142453300007554EstuarineMNIIDVHFINSGWGNDHGTRAADLVNLTIDPMGKPVATVKNPFDYYTAELTAVFLNDEWVCDLD*
Ga0102824_121602013300007681EstuarineMKTLNVHFINSGWGNDHGVYETDLVELTVDTLGKPVAKITNPFDYYTAELTAVFLNDEWICDLD*
Ga0102867_120801813300007716EstuarineMATLNVHFINSGWGNDHGVYETDLVELTVDTLGKPVAKITNPFDYYTAELTAVFLNDEWICDLD*
Ga0105744_105073723300007863Estuary WaterMKTLNVHFINSGWGNDHGVYETDLIELTVDTLGKPVAKITNPFDYYTAELTARFSNDEWVCDLD*
Ga0105749_118820013300007864Estuary WaterMKTLNVHFINSGWGNDHGTRAADLVNLTIDPMGKPVATIKNPFDYYTAELTARFLNDEWVCDLD*
Ga0105745_109012423300007972Estuary WaterMTTLNVHFINSGWGNDHGTRAADLVNLTIDPMGKPVATIKNPFDYYTAELTAVFLNDEWVCDLD*
Ga0102887_110866013300008961EstuarineMTTLNVHFINSGWGNDHGTRAADLVELTVDTLGKPVAKITNPFDYYTAELTARFSNDEWVCDLD*
Ga0102811_129056013300009024EstuarineHFINSGWGNDHGVREVELLEITVNEAGTPIAKITNPFNYYTAELTAVFLNDEWVCDLD*
Ga0102911_107306643300009049EstuarineMKTLNVHFINSGWGNDHGVYETDLIELTVDTLGKPVAKITNPFDYYTAELTAVFLNDEWICDLD*
Ga0102909_114102113300009050EstuarineMNIIDVHFINSGWGNDHGTRAADLVNLTIDPMGKPVATIKNPFNYYTAELTAVFLNDEWICDLD*
Ga0102886_117129223300009052EstuarineMKTLNVQFINSGWGNDHGVREVELLEITVNEAGTPIAKITNPFDYYTAELTARFLNTEWVCDLD*
Ga0115566_1016277423300009071Pelagic MarineMKTLNVQFINSGWGNDHGVREVELLDITVNAAGTPIAKIRNPFNYYTAELTARFLNTEWVCDLD*
Ga0115552_141028223300009077Pelagic MarineMKTLNVQFINSGWGNDHGVREVELLDITVNAAGTPVAKIRNPFNYYTAELTARFLNTEWVCDLD*
Ga0102814_1062186523300009079EstuarineGNDHGVYETDLIELTVDTLGKPVAKITNPFDYYTAELTAVFLNDEWVCDLD*
Ga0102812_1033030433300009086EstuarineMNIIDVHFINSGWGNDHGTRAADLVNLTIDPMGKPVATIKNPFDYYTAELTAVFLNDEWVCDLD*
Ga0102885_112907413300009142EstuarineHFINSGWGNDHGTRAADLVELTVDTLGKPVAKITNPFDYYTAELTAVFLNDEWICDLD*
Ga0115551_115872123300009193Pelagic MarineMTTLNVHFINSGWGNDHGTRVADLVELTVDTLGKPVAKITNPFDYYTAELTAVFLNDEWICDLD*
Ga0115551_119510623300009193Pelagic MarineMKTLNVQFINSGWGNDHGVREVELLDITVNAAGTPIAKITNPFNYYTAELTARFLNTEWVCDLD*
Ga0114998_1029907623300009422MarineMKTLNVHFINSGWGNDHGVREVELLDITVNDAGTPIAKITNPFNYYTAELTARFLNTEWVCDLD*
Ga0115548_111223823300009423Pelagic MarineMKTLNVHFINSGWGNDHGVREVELLDITVNAAGTPVAKIRNPFNYYTAELTARFLNTEWVCDLD*
Ga0115546_123458713300009435Pelagic MarineMKTLNVQFINSGWGNDHGVREVELLDITVNAAGTPVAKITNPFNYYTAELTARFLNTEWVCDLD*
Ga0115561_126869023300009440Pelagic MarineMIIETRSGKDHKMKTLNVHFINSGWGNDHGVREVELLDITVNQAGTPIAKITNPFNYYTAELTARFLNTEWVCDLD*
Ga0115553_108118033300009445Pelagic MarineMKTLNVHFINSGWGNDHGVREAELLEITVNAAGTPIAKISNPFNYYTAELTARFLNTEWVCDLD*
Ga0115560_107538223300009447Pelagic MarineMKTLNVQFINSGWGNDHGTRAADLVELTVDTLGKPVAKITNPFDYYTAELTARFLNTEWVCDLD*
Ga0115558_115689333300009449Pelagic MarineMTTLNVHFINSGWGNDHGTRAADLVELTVDTLGKPVAKITNPFNYYTAELTARFLNTEWVCDLD*
Ga0115555_111140713300009476Pelagic MarineMKTLNVHFINSGWGNDHGVREVELLEITVNEAGTPIAKITNPFNYYTAELTARFLNTEWVCDLD*
Ga0115572_1012740923300009507Pelagic MarineMKTLNVQFINSGWGNDHGVREVELLDITVNAAGTPIAKISNPFNYYTAELTARFLNTEWVCDLD*
Ga0098049_126351423300010149MarineMKTINVHFINSGWGNDHGLYEVDLVELTVDTLGKPVAKITNPFDNYTAGLTA
Ga0098056_105109623300010150MarineMKTINVHFINSGWGNDHGLYEVDLVELTVDTLGKPVAKITNPFDNYTAGLTAVFLNDEWVCDLD*
Ga0129324_1004253413300010368Freshwater To Marine Saline GradientMKTLNVHFINSGWGNDHGTRAADLVELTVDTLGKPVAKITNPFDYYTAELTAVFLNDEWVCDLD*
Ga0151674_100173213300011252MarineLERNLKMTTLNVHFINSGWGNDHGTRAADLVELTVDTLGKPVAKITNPFDYYTAELTAVFLNDEWICDLD*
Ga0151675_103132113300011254MarineMTTLNVHFINSGWGNDHGTRAADLVELTVDTLGKPVAKITNPFNYYTAELTAVFLNDEWICDLD*
Ga0163179_1199546213300012953SeawaterMKTLNVQFINSGWGNDHGVREVELLDITVNEAGTPIAKIRNPFNYYTAELTARFLNTEWVCDLD*
Ga0181377_104305533300017706MarineMKTLNVQFINSGWGNDHGVREVELLEITVNQAGTPIAKITNPFNYYTAELTARFLNTEWVCDLD
Ga0181377_106070223300017706MarineMTTLNVQFINSGWGNDHGVREVGLLEITANAACTPIAKIANPFNYYTAELTARFLNTEWVCDLD
Ga0181403_106855023300017710SeawaterMKTLNVHFINSGWGNDHGVYETDLVELTVDTLGKPVAKITNPFDYYTAELTARFSNDEWVCDLD
Ga0181403_110178313300017710SeawaterKMKTLNVHFINSGWGNDHGTRAADLVNLTIDPMGKPVATIKNPFNYYTAELTAVFLNDEWVCDLD
Ga0181403_112196813300017710SeawaterMNIIDVHFINSGWGNDHGTRAADLVELTVDTLGKPVAKITNPFDYYTAELTAVFLNDEWICDLD
Ga0181412_105403813300017714SeawaterMKTLNVHFINSGWGNDHGTRATDLVELTVDTLGKPVAKITNPFDYYTAELTARFSNDEWVCDLD
Ga0181396_107938113300017729SeawaterMKTLNVQFINSGWGNDHGVREVELLEITVNEAGTPIAKITNPFNYYTAGLTAVFLNDEWVCDLD
Ga0181426_101625543300017733SeawaterMKTLNVHFINSGWGNDDGVYETDLIELTVDTLGKPVAKITNPFDYYTAELTARFSNDEWVCDLD
Ga0181427_110133913300017745SeawaterMATLNVHFINSGWGNDHGVYETDLIELTVDTLGKPVAKITNPFDYYTAELTARFSNDEWVCDLD
Ga0181392_102107333300017749SeawaterMKTLNVHFINSGWGNDHGLYEVDLVELTVDTLGKPVAKITNPFDYYTAELTAVFLNDEWICDLD
Ga0181400_103978953300017752SeawaterMATLNVHFINSGWGNDHGVYETDLVELTVDTLGKPVATIKNPFNYYTAELTAVFLNDEWVCDLD
Ga0181409_110518533300017758SeawaterKTLNVHFINSGWGNDHGVYETDLIELTVDTLGKPVAKITNPFNYYTAGLTAVFLNDEWVCDLD
Ga0181414_110016313300017759SeawaterMTTLNVHFINSGWGNDHGTRAADLVELTVDTLGKPVAKITNPFDYYTAELTARFSNDEWVCDLD
Ga0181385_123125313300017764SeawaterMATLNVHFINSGWGNDHGTRAADLVNLTIDPMGKPVATIKNPFNYYTAELTAVFLNDEWVCDLD
Ga0181413_125328013300017765SeawaterMKTLNVHFINSGWGNDHGLYEVDLVELTVDTLGKPVAKITNPFNYYSAGLTAVFLNDEWVCDLD
Ga0181395_114120043300017779SeawaterMKTLNVHFINSGWGNDHGLYEVDLVELTVDTLGKPVAKITNPFNYYTAGLTAVFLNDEWV
Ga0206125_1021240313300020165SeawaterMKTLNVQFINSGWGNDHGVREVELLDITVNAAGTPIAKIRNPFNYYTAELTARFLNTEWVCDLD
Ga0206127_128627313300020169SeawaterMKTLNVQFINSGWGNDHGVREVELLDITVNAAGTPVAKITNPFNYYTAELTARFLNTEWVCDLD
Ga0206131_1008531933300020185SeawaterMTTLNVHFINSGWGNDHGTRAADLVELTVDTLGKPVAKITNPFDYYTAELTAVFLNDEWICDLD
Ga0206131_1040659523300020185SeawaterMNIIDVHFINSGWGNDHGTRAADLVNLTIDPMGKPVATIKNPFNYYTAELTAVFLNDEWVCDLD
Ga0211505_103708243300020352MarineMKTLNVLFINSGWGNNHGVREVELLDITVNQAGTPIAKITNPFNYYTTELTAKFLNTEWVCDLD
Ga0211505_108157113300020352MarineMNIIDVHFINSGWGNDHGTRAADLVELTIDPMGKPVATIKNPFNYYTAELTAVFLNDEWICDLD
Ga0211678_1038209813300020388MarineMKTLNVQFINSGWGNDHGVREVELLEITVNAAGTPIAKITNPFNYYTAELTARFLNTEWVCDLD
Ga0211521_1005050523300020428MarineMKTLNVQFINSGWGNDHGVREVELLDITVNQAGTPIAKIRNPFNYYTAELTARFLNTEWVCDLD
Ga0211576_1005383013300020438MarineMATLNVHFINSGWGNDHGVYETDLVELTVDTLGKPVAKITNPFDYYTAELTARFSNDEWVCDLD
Ga0211576_1029221833300020438MarineMKTLNVHFINSGWGNDHGLYEVDLVELTVDTLGKPVAKITNPFNYYTAGLTAVFLNDEWVCDLD
Ga0206682_1004088253300021185SeawaterMKTLNVQFINSGWGNDHGVREVELLEITVNEAGTPIAKITNPFNYYTAELTARFLNTEWVCDLD
Ga0213869_1003610413300021375SeawaterMKTLNVHFINTGWGNDHGVREAELLEITVNEAGTPIAKIRNPFNYYTAELTARFLNTEWVCDLD
Ga0213869_1010913333300021375SeawaterMKTLNVHFINSGWGNDHGVREAELLEITVNQAGTPIAKISNPFNYYTAELTARFLNTEWVCDLD
Ga0213868_1034035943300021389SeawaterMNIIDVHFINSGWGNDHGKRAADLVNLTIDPMGKPVATIKNPFDYYTAELTAVFLNDEWICDLD
Ga0222717_1000268013300021957Estuarine WaterMKTLNVHFINSGWGNDHGVYETDLIELTVDTLGKPVAKITNPFDYYTAELTARFSNDEWVCDLD
(restricted) Ga0233432_1002210293300023109SeawaterMNIIDVHFINSGWGNDHGTRAADLVNLTIDPMGKPVATIKNPFDYYTAELIAVFLNDEWVCDLD
(restricted) Ga0233432_1038852923300023109SeawaterMTTLNVHFINSGWGNDHGTRAADLVELTVDTMGKPVAKITNPFDYYTAELTAVFLNDEWICDLD
(restricted) Ga0233432_1049022713300023109SeawaterMNIIDVHFINSGWGNDHGTRAADLVNLTIDPMGKPVATIKNPFDYYTAELTAVFLNDEWVCDLD
Ga0244776_1037732513300024348EstuarineVHFINSGWGNDHGTRAADLVELTVDTLGKPVAKITNPFDYYTAELTAVFLNDEWICDLD
Ga0208298_110745723300025084MarineMKTINVHFINSGWGNDHGLYEVDLVELTVDTLGKPVAKITNPFDNYTAGLIAVFLNDEWVCDLD
Ga0208434_101818253300025098MarineMKTINVHFINSGWGNDHGLYEVDLVELTVDTLGKPVAKITNPFDNYTAGLTAVFLNDEWVCDLD
Ga0209336_1011292623300025137MarineMKTLNVHFINTGWGNDHGTRAADLVELTVDTLGKPVAKISNPFNYYTAELTAVFLNDEWVCDLD
Ga0209634_101081383300025138MarineMKTLNVHFINSGWGNDHGVREAELLEITVNEAGTPIAKITNPFNYYTAELTARFLNTEWVCDLD
Ga0209634_119610713300025138MarineMKTLNVHFINSGWGNDHGVRKAELLEITVNEAGTPIAKITNPFDYYTAELTARFLNTEWVCDLD
Ga0209634_121728513300025138MarineMKTLNVHFINSGWGNDHGVREVELLEITVNEAGTPIAKITNPFDYYTAELTARFLNTEWVCDLD
Ga0209337_131123313300025168MarineMKTLNVHFINTGWGNDHGTRAADLVELTVDTLGKPVAKITNPFDYYTAELTAVFLNDEWICDLD
Ga0208660_105006223300025570AqueousMKTLNVHFINSGWGNDHGTRAADLVELTIDPMGKPVAKITNPFDYYTAELTAVFLNDEWVCDLD
Ga0209657_113649933300025676MarineMNIIDVRFINSGWGNDHGTRAADLVELTVDTLGKPVAKITNPFDYYTAELTAVFLNDEWICDLD
Ga0208545_102214113300025806AqueousMKTLNVHFINSGWGNDHGTRAADLVELTIDPMGKPVAKITNPFDYYTAELTAVFLNDEWICDLD
Ga0209832_110788023300025830Pelagic MarineMKTLNVHFINSGWGNDHGVREVELLEITVNEAGTPIAKITNPFNYYTAELTARFLNTEWVCDLD
Ga0209425_1020869023300025897Pelagic MarineMKTLNVQFINSGWGNDHGVREVELLDITVNEAGTPVAKITNPFNYYTAELTARFLNTEWICDLD
Ga0209711_1019415013300027788MarineWGNDHGVREVELLEITVNEAGTPIAKITNPFDYYTAELTARFLNTEWVCDLD
Ga0209090_1016432613300027813MarineMKTLNVQFINSGWGNDHGVREVELLEITVNEAGTPIAKITNPFDYYTAELTARFLNTEWVCDLD
Ga0183757_103339913300029787MarineMKTLNVQFINSGWGNDHGVREVELLDITVNAAGTPVAKIRNPFNYYTAELTARFLNTEWV
Ga0307489_1038578313300031569Sackhole BrineMTTLNVHFINSGWGNDHGTRAADLVELTVDTLGKPVAKITNPFDYYTAELTAVFLNDEWICD
Ga0302114_1007968323300031621MarineMKTLNVHFINSGWGNDHGVREVELLDITVNDAGTPIAKITNPFNYYTAELTARFLNTEWVCDLD
Ga0302118_1008911213300031627MarineMKTLNVHFINSGWGNDHGTRAADLVELTVDTMGKPVAKITNPFDYYTAELTAVFLNDEWICDLD


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