Metagenome / Metatranscriptome Family F086977

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086977
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	95 residues
Representative Sequence	LARWLADGQRLFSVCLETLENSERLQTRNQTLESENEMLREEVARLRHKVDMLQTDRSEMVAAFNDLAGHVTQVVDHILQKSEDGENSK
Number of Associated Samples	102
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	22.43 %
% of genes near scaffold ends (potentially truncated)	77.27 %
% of genes from short scaffolds (< 2000 bps)	90.91 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (72.727 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (15.454 % of family members)
Environment Ontology (ENVO)	Unclassified (33.636 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (40.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 74.36% β-sheet: 0.00% Coil/Unstructured: 25.64%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF00170	bZIP_1	7.27
PF00072	Response_reg	5.45
PF08376	NIT	4.55
PF00158	Sigma54_activat	4.55
PF02954	HTH_8	2.73
PF01522	Polysacc_deac_1	0.91
PF02812	ELFV_dehydrog_N	0.91
PF00005	ABC_tran	0.91
PF01844	HNH	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0334	Glutamate dehydrogenase/leucine dehydrogenase	Amino acid transport and metabolism [E]	0.91
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
All Organisms	root	All Organisms	27.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
cellular organisms	root	All Organisms → cellular organisms	27.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	24.55 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.82 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.18 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.73 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	1.82 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.91 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.45 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.73 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.82 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	1.82 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %
Chlorophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta	0.91 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.73 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.73 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	1.82 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1.82 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.91 %
Mamiellophyceae	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae	0.91 %
Oceanospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales	0.91 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.91 %
Epsilonproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.73 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	1.82 %
Natrialbales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Natrialbales	1.82 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	1.82 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.91 %
Zooshikellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Zooshikellaceae	0.91 %
Mamiellales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales	0.91 %
Campylobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales	0.91 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.91 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.73 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.82 %
Natrialbaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Natrialbales → Natrialbaceae	1.82 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.91 %
Roseobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter	0.91 %
Mamiellaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae	0.91 %
Sulfitobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter	0.91 %
Helicobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Helicobacteraceae	0.91 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	0.91 %
Zooshikella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Zooshikellaceae → Zooshikella	0.91 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.73 %
Natronolimnohabitans	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Natrialbales → Natrialbaceae → Natronolimnohabitans	1.82 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → environmental samples	0.91 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.91 %
unclassified Hyphomicrobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium	0.91 %
Helicobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Helicobacteraceae → Helicobacter	0.91 %
Mesorhizobium loti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium loti	0.91 %
Micromonas	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas	0.91 %
Sulfitobacter mediterraneus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter → Sulfitobacter mediterraneus	0.91 %
unclassified Roseobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter	0.91 %
Zooshikella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Zooshikellaceae → Zooshikella	0.91 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.73 %
Natronolimnohabitans innermongolicus	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Natrialbales → Natrialbaceae → Natronolimnohabitans → Natronolimnohabitans innermongolicus	1.82 %
uncultured Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → environmental samples → uncultured Gemmatimonadaceae bacterium	0.91 %
Mesorhizobium sp. URHB0007	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. URHB0007	0.91 %
Micromonas commoda	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas commoda	0.91 %
Hyphomicrobium sp. MC1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. MC1	0.91 %
Roseobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	0.91 %
Helicobacter pylori	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Helicobacteraceae → Helicobacter → Helicobacter pylori	0.91 %
Mesorhizobium loti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium loti	0.91 %
Sulfitobacter mediterraneus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter → Sulfitobacter mediterraneus	0.91 %
Zooshikella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Zooshikellaceae → Zooshikella	0.91 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003321\|soilH1_10375929	Not Available	1053	Open in IMG/M
3300004009\|Ga0055437_10118359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter → Sulfitobacter mediterraneus	797	Open in IMG/M
3300004019\|Ga0055439_10257022	Not Available	571	Open in IMG/M
3300004145\|Ga0055489_10251387	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Helicobacteraceae → Helicobacter → Helicobacter pylori	560	Open in IMG/M
3300005183\|Ga0068993_10032917	Not Available	1414	Open in IMG/M
3300005288\|Ga0065714_10534193	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Natrialbales → Natrialbaceae → Natronolimnohabitans → Natronolimnohabitans innermongolicus	506	Open in IMG/M
3300005294\|Ga0065705_10949251	Not Available	561	Open in IMG/M
3300005347\|Ga0070668_102110109	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Natrialbales → Natrialbaceae → Natronolimnohabitans → Natronolimnohabitans innermongolicus	520	Open in IMG/M
3300005406\|Ga0070703_10245650	Not Available	724	Open in IMG/M
3300005444\|Ga0070694_101148083	Not Available	649	Open in IMG/M
3300005467\|Ga0070706_100103203	All Organisms → cellular organisms → Bacteria	2651	Open in IMG/M
3300005467\|Ga0070706_100359259	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300005468\|Ga0070707_100424801	All Organisms → cellular organisms → Bacteria	1289	Open in IMG/M
3300005468\|Ga0070707_102120780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium loti	530	Open in IMG/M
3300005471\|Ga0070698_102049106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. URHB0007	526	Open in IMG/M
3300005526\|Ga0073909_10664915	Not Available	520	Open in IMG/M
3300005549\|Ga0070704_100543182	Not Available	1014	Open in IMG/M
3300005842\|Ga0068858_101850993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. MC1	596	Open in IMG/M
3300005844\|Ga0068862_102578463	Not Available	520	Open in IMG/M
3300005880\|Ga0075298_1020938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	618	Open in IMG/M
3300006755\|Ga0079222_12648757	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas commoda	504	Open in IMG/M
3300006852\|Ga0075433_11755387	Not Available	534	Open in IMG/M
3300007255\|Ga0099791_10081662	All Organisms → cellular organisms → Bacteria	1474	Open in IMG/M
3300009038\|Ga0099829_10899115	Not Available	735	Open in IMG/M
3300009089\|Ga0099828_10898578	Not Available	791	Open in IMG/M
3300009089\|Ga0099828_11325328	Not Available	637	Open in IMG/M
3300009090\|Ga0099827_10284122	Not Available	1397	Open in IMG/M
3300009153\|Ga0105094_10689750	Not Available	598	Open in IMG/M
3300009162\|Ga0075423_10535581	Not Available	1232	Open in IMG/M
3300009176\|Ga0105242_11797910	Not Available	651	Open in IMG/M
3300009803\|Ga0105065_1041347	Not Available	627	Open in IMG/M
3300009816\|Ga0105076_1061512	Not Available	691	Open in IMG/M
3300010399\|Ga0134127_11845136	Not Available	681	Open in IMG/M
3300011269\|Ga0137392_10465748	Not Available	1049	Open in IMG/M
3300011269\|Ga0137392_11403371	Not Available	558	Open in IMG/M
3300011438\|Ga0137451_1244320	Not Available	566	Open in IMG/M
3300012209\|Ga0137379_10889335	Not Available	795	Open in IMG/M
3300012355\|Ga0137369_10248014	All Organisms → cellular organisms → Bacteria	1348	Open in IMG/M
3300012361\|Ga0137360_10717120	Not Available	859	Open in IMG/M
3300012923\|Ga0137359_10057915	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3374	Open in IMG/M
3300012923\|Ga0137359_10261554	All Organisms → cellular organisms → Bacteria	1543	Open in IMG/M
3300012931\|Ga0153915_10149655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Zooshikellaceae → Zooshikella	2529	Open in IMG/M
3300012961\|Ga0164302_11548007	Not Available	549	Open in IMG/M
3300013100\|Ga0157373_11304898	Not Available	550	Open in IMG/M
3300014873\|Ga0180066_1044525	Not Available	868	Open in IMG/M
3300014881\|Ga0180094_1084475	Not Available	716	Open in IMG/M
3300015372\|Ga0132256_100295680	All Organisms → cellular organisms → Bacteria	1702	Open in IMG/M
3300017927\|Ga0187824_10107257	Not Available	903	Open in IMG/M
3300017936\|Ga0187821_10092531	Not Available	1109	Open in IMG/M
3300017973\|Ga0187780_10913951	Not Available	637	Open in IMG/M
3300017997\|Ga0184610_1043924	Not Available	1301	Open in IMG/M
3300018028\|Ga0184608_10355749	Not Available	642	Open in IMG/M
3300018029\|Ga0187787_10356666	Not Available	565	Open in IMG/M
3300018056\|Ga0184623_10394073	Not Available	611	Open in IMG/M
3300018060\|Ga0187765_10162709	Not Available	1267	Open in IMG/M
3300018071\|Ga0184618_10315596	Not Available	666	Open in IMG/M
3300018075\|Ga0184632_10109289	Not Available	1214	Open in IMG/M
3300018075\|Ga0184632_10390643	Not Available	586	Open in IMG/M
3300018084\|Ga0184629_10343720	Not Available	786	Open in IMG/M
3300019487\|Ga0187893_10218627	All Organisms → cellular organisms → Bacteria	1440	Open in IMG/M
3300019789\|Ga0137408_1171769	Not Available	1024	Open in IMG/M
3300019886\|Ga0193727_1140354	Not Available	669	Open in IMG/M
3300020021\|Ga0193726_1057743	All Organisms → cellular organisms → Bacteria	1834	Open in IMG/M
3300020022\|Ga0193733_1056065	Not Available	1111	Open in IMG/M
3300020061\|Ga0193716_1078913	All Organisms → cellular organisms → Bacteria	1461	Open in IMG/M
3300020067\|Ga0180109_1031515	Not Available	570	Open in IMG/M
3300020150\|Ga0187768_1075446	Not Available	760	Open in IMG/M
3300021178\|Ga0210408_11497517	Not Available	505	Open in IMG/M
3300021432\|Ga0210384_10024128	All Organisms → cellular organisms → Bacteria	5778	Open in IMG/M
3300021432\|Ga0210384_10828902	Not Available	823	Open in IMG/M
3300021559\|Ga0210409_10528621	Not Available	1044	Open in IMG/M
3300022724\|Ga0242665_10213138	Not Available	642	Open in IMG/M
3300025551\|Ga0210131_1047592	Not Available	690	Open in IMG/M
3300025569\|Ga0210073_1130205	Not Available	547	Open in IMG/M
3300025580\|Ga0210138_1069048	Not Available	832	Open in IMG/M
3300025885\|Ga0207653_10097589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1036	Open in IMG/M
3300025922\|Ga0207646_10083515	All Organisms → cellular organisms → Bacteria	2857	Open in IMG/M
3300025934\|Ga0207686_10959209	Not Available	692	Open in IMG/M
3300025940\|Ga0207691_10830221	Not Available	776	Open in IMG/M
3300026075\|Ga0207708_10622487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	916	Open in IMG/M
3300026496\|Ga0257157_1060725	Not Available	642	Open in IMG/M
3300026555\|Ga0179593_1033979	All Organisms → cellular organisms → Bacteria	2305	Open in IMG/M
3300026557\|Ga0179587_10266940	Not Available	1098	Open in IMG/M
3300027561\|Ga0209887_1025601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1385	Open in IMG/M
3300027875\|Ga0209283_10780374	Not Available	589	Open in IMG/M
3300027882\|Ga0209590_10134156	Not Available	1519	Open in IMG/M
3300027907\|Ga0207428_11239897	Not Available	518	Open in IMG/M
3300027909\|Ga0209382_10561092	Not Available	1249	Open in IMG/M
3300027957\|Ga0209857_1034014	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300028072\|Ga0247675_1076395	Not Available	510	Open in IMG/M
3300028380\|Ga0268265_10285097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1480	Open in IMG/M
3300028784\|Ga0307282_10661932	Not Available	506	Open in IMG/M
3300028792\|Ga0307504_10160545	Not Available	770	Open in IMG/M
3300028803\|Ga0307281_10295511	Not Available	603	Open in IMG/M
3300028885\|Ga0307304_10531238	Not Available	541	Open in IMG/M
3300030006\|Ga0299907_11349074	Not Available	504	Open in IMG/M
3300031720\|Ga0307469_11100392	Not Available	747	Open in IMG/M
3300031740\|Ga0307468_101715102	Not Available	591	Open in IMG/M
3300031858\|Ga0310892_10820874	Not Available	646	Open in IMG/M
3300031949\|Ga0214473_11775859	Not Available	611	Open in IMG/M
3300032180\|Ga0307471_101003286	Not Available	1002	Open in IMG/M
3300032180\|Ga0307471_101015650	Not Available	996	Open in IMG/M
3300032770\|Ga0335085_10217919	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → environmental samples → uncultured Gemmatimonadaceae bacterium	2321	Open in IMG/M
3300033004\|Ga0335084_10628771	Not Available	1097	Open in IMG/M
3300033480\|Ga0316620_11232469	Not Available	734	Open in IMG/M
3300033513\|Ga0316628_102117165	Not Available	746	Open in IMG/M
3300034090\|Ga0326723_0233839	Not Available	817	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.27%
Host-Associated	Host-Associated	12.73%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.36%
Aquatic	Environmental → Aquatic	20.91%
Plants	Host-Associated → Plants	12.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.55%
Sediment	Environmental → Aquatic → Sediment	10.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.09%
Marine	Environmental → Aquatic → Marine	6.36%
Freshwater	Environmental → Aquatic → Freshwater	4.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.64%
Peat	Environmental → Terrestrial → Peat	0.91%
Cave	Environmental → Terrestrial → Cave	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.82%
Loam	Environmental → Terrestrial → Soil → Loam	10.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.18%
Wetlands	Environmental → Aquatic → Marine → Wetlands	6.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.36%
Sand	Environmental → Terrestrial → Soil → Sand	3.64%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.73%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.73%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.73%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.82%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.91%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.18%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	6.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.36%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	3.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.73%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.82%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.82%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.91%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.91%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.91%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.27%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	6.36%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.36%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.64%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.64%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.64%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	3.64%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.64%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.73%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.82%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.91%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.91%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.91%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.91%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.91%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.91%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.91%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.91%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.91%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.91%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300004009	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2	Environmental	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300004145	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2	Environmental	Open in IMG/M
3300005183	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005880	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_201	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009153	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009803	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_40_50	Environmental	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300014873	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10D	Environmental	Open in IMG/M
3300014881	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_1Da	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020061	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c1	Environmental	Open in IMG/M
3300020067	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT47_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020150	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025551	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025569	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025580	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1 (SPAdes)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027957	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20 (SPAdes)	Environmental	Open in IMG/M
3300028072	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK16	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
soilH1_103759292	3300003321	Sugarcane Root And Bulk Soil	GIADTMSDSAPAELMRWLSEGHRFFSLCQDQLARTEHLEAKARTLEAENEMLREEMARLRHRVDMLQTDRSEMVAAFNDLAGHVTQVVDHILQKSENGEETK*
Ga0055437_101183591	3300004009	Natural And Restored Wetlands	MRDHSASELARWLAEGQRLFRVCLETLQRSEQLQGRNQTLESENEMLREEVARLRRRVDLLQAERTEMVATFNDLAGHVTQVVDHILQKSEEDETSS*
Ga0055439_102570222	3300004019	Natural And Restored Wetlands	ANSAPELARWLADGQRFFSMCLDTIEQFERLQTRNHTLEGENAMLREEVARLRHRMDVLQADRAEMVAAFNDLAGHVTQVVDHILQKSEDGENGGAK*
Ga0055489_102513871	3300004145	Natural And Restored Wetlands	ELARWLADGRRLFTECLDILENSERLQTRNQTLVSENEMLREEVARLRHKLDVLETDRAEMVAAFNDLAGHVTQVVDHILQKSEDGENGQHGK*
Ga0068993_100329171	3300005183	Natural And Restored Wetlands	MRDHSASELARWLAEGQRLFRVCLETLQRSEQLQGRNQTLESENEMLREEIARLRRRVDLLQAERTEMVATFNDLAGHVTQVVDHILQKSEEDETSS*
Ga0065714_105341931	3300005288	Miscanthus Rhizosphere	ELMQWLSEGQRFFSLCQDQLARTDHLEAKARTLEAENEMLREEMARLRHRVDMLQTDRSEMVAAFNDLAGHVTQVVDHILQKSENGEETK*
Ga0065705_109492512	3300005294	Switchgrass Rhizosphere	ARWLAEGQRLFGVCLETLENFERVNSRIQTLETENEILREELARLRHRTDMLQAERSEMVAVFNDLAGHVTQVVDHILQKSEDDENSRH*
Ga0070668_1021101091	3300005347	Switchgrass Rhizosphere	AKKGIADTMSDSAPAELMQWLSEGQRFFSLCQDQLARTDHLEAKARTLEAENEMLREEMARLRHRVDMLQTDRSEMVAAFNDLAGHVTQVVDHILQKSENGEETK*
Ga0070703_102456502	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	WLADGQRFFSLCLEQLGRADHLEARARTLEAENEMLREEMARLRHKADMLQTDRSEMVAAFNDLAGHVTQVVDHILQKSEDGENSK*
Ga0070700_1018225421	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	SLQRGVGASEAGQAKGLNQTMTANSAPELARWLAEGQRLFGVCLETLENFERVNSRIQTLETENEILREELARLRHRTDMLQAERSEMVAVFNDLAGHVTQVVDHILQKSEDDENSRH*
Ga0070694_1011480832	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	RSGHAAKKRIDDTMTDSAPPELARWLADGQRFFSLCLEQLGRADHLEARARTLEAENEMLREEMARLRHKADMLQTDRSEMVAAFNDLAGHVTQVVDHILQKSEDDENSRH*
Ga0070706_1001032033	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	QRLFAVCLETLENSERLQARNQTLESENEMLREEVARLRQKVDVLQADRSEMVAAFNDLAGHVTQVVDHILQKSEDGENSKP*
Ga0070706_1003592592	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	ADHLEARARTLEAENEMLREEMARLRHKADMLQTDRAEMVAAFNDLAGHVTQVVDHILQKSEDGENSK*
Ga0070707_1004248013	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LGRADHLEARARTLEAENEMLREEMARLRHKADMLQTDRAEMVAAFNDLAGHVTQVVDHILQKSEDGENSK*
Ga0070707_1021207801	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	SPELARWLADGQRLFAVCLETLENSERLQARNQTLESENEMLREEMARLRQKVDVLQADRSEMVAAFNDLAGHVTQVVDHILQKSEDGENSKA*
Ga0070698_1020491061	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	LQRAVGASTHEGHAKGSTHAMTANASPELARWLADGQRLFAVCLETLENSERLQARNQTLESENEMLREEVARLRQKVDVLQADRSEMVAAFNDLAGHVTQVVDHILQKSEDGENSKP*
Ga0073909_106649151	3300005526	Surface Soil	HPDAGKAKGHTLPMTANSPELARWLADGQRLFSVCLETLENSERLQTRNQTLESENEMLREEVARLRHKVDMLQTDRSEMVAAFNDLAGHVTQVVDHILQKSEDGENSK*
Ga0070704_1005431821	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MTSNSPELARWLADGQRLFGVCMETLENSERLQARNQTLESENEMLREELARLRHKVDMLQTDRSEMVAAFNDLAGHVTQVVDHILQKSEDGENSK*
Ga0068858_1018509931	3300005842	Switchgrass Rhizosphere	PELARWLAEGQRLFGVCLETLENFERVNSRIQTLETENEILREELARLRHRTDMLQAERSEMVAVFNDLAGHVTQVVDHILQKSEDDENSRH*
Ga0068862_1025784631	3300005844	Switchgrass Rhizosphere	IGGATGDDEGYAKGPTTTMTANSSSDLARWLADGQRFFGVCLQTLENAEELRIRNQTLEGENDMLREEISRLRHKAEGLQADRSEMIAAFNDLAGHVTQVVDHILQKSEDGENGGGVK*
Ga0075298_10209381	3300005880	Rice Paddy Soil	SDAGGTTRTSHTMTANSASDLSQWLADGQRLFGVCLTMLENSERLEARARTLESENEMLREEVGRLRDKVDGLQTERSEMIATFNDLAGHVTQVVDQILQKSENGEEDGAK*
Ga0079222_126487571	3300006755	Agricultural Soil	AKKGIDDTMSDSAPPELVRWLADGQRFFGLCLEQLGRADHLEAKARTLEAENEMLREEMARLRHKVDMLQTDRSEMVAAFNDLAGHVTQVVDHILQKSEDGEEAK*
Ga0075433_117553872	3300006852	Populus Rhizosphere	AKKGIADTMSDSAAAELMRWLSDGQRFFSICLEQLGRTDHLEAKARTLEAENEMLRGEMARLRHRVDMLQTDRSEMVAAFNDLAGHVTQVVDHILQKSENGEETK*
Ga0099791_100816622	3300007255	Vadose Zone Soil	KKRIDDTMTDSAPPELARWLADGQRFFSLCLEQLGRADHLEARARTLEAENEMLREEMARLRHKADLLQTDRAEMVAAFNDLAGHVTQVVDHILQKSEDGENST*
Ga0099829_108991151	3300009038	Vadose Zone Soil	ADGQRFFSLCLEQLGRADHLEARARTLEAENEMLREEMARLRHKADMLQTDRSEMVAAFNDLAGHVTQVVDHILQKSEDGENSK*
Ga0099828_108985781	3300009089	Vadose Zone Soil	MTEHPSSDLARWLADGQRLFAVCLETLENSERLQARAATLEAENEMLREEVARLRHRADVLQTERAEMVAAFNDLA
Ga0099828_113253281	3300009089	Vadose Zone Soil	RKAVAKGAGGSPTNAGKGVTLTMATDSTSDLTRWLAEGQRFLGLCLETVENAHRLQARNQTLERENEMLREEVSRLRLRIDVLQADRNDMVAAFNDLAGHVTQVVDHILQKSEDGENGR*
Ga0099827_102841222	3300009090	Vadose Zone Soil	MTDKAAPELARWLAEGQRLFGLCLEALERTEHLEARIQTLESENEMLREEVPRLRHKVDVLQAERAEMVAAFNDLAGHVTQVVDGMLQKSEDGEMGK*
Ga0105094_106897501	3300009153	Freshwater Sediment	RLRRVGAGTDAAQPKGTVATMTPNSAPELARWLADGQRFFGMCLDTIGQLDRLQTRNHTLEGENAMLREEVARLRHRVDVLQTDRGEMVAAFNDLAGHVTQVVDHILQKAEEGESGSAR*
Ga0075423_105355811	3300009162	Populus Rhizosphere	LARTDHLEAKARTLEAENEMLREEMARLRHRVDMLQTDRSEMVAAFNDLAGHVTQVVDHILQKSENGEETK*
Ga0105242_117979101	3300009176	Miscanthus Rhizosphere	MSDSAPAELMQWLSEGQRFFSLCQDQLARTDHLEAKARTLEAENEMLREEMARLRHRVDMLQTDRSEMVAAFNDLAGHVTQVVDHILQKSENGEETK*
Ga0105065_10413472	3300009803	Groundwater Sand	VCLETLENFERVQSRNQTLESENEMLREEVARLRYKVDVLQADRSEMVAAFNDLAGHVTQVVDHILQKSEDGENTTK*
Ga0105076_10615121	3300009816	Groundwater Sand	DGQRLFGVCLETLESFERVQSRNQTLESENEMLREEVARLRHKVDVLQADRSEMVAAFNDLAGHVTQVVDHILQKSEDGESSPK*
Ga0134127_118451361	3300010399	Terrestrial Soil	NAPELARWLADGQRFFGMCLDTIEQLERLQARNHTLEGENAMLREEVARLRQRMDVLQADRTEMVAAFNDLAGHVTQVVDHILQKSEDGENGDR*
Ga0137392_104657481	3300011269	Vadose Zone Soil	LETLENSERLQTRNQTLESENEMLREEVARLRHKVDMLQTDRSEMVAAFNDLAGHVTQVVDHILQKSEDGENSK*
Ga0137392_114033711	3300011269	Vadose Zone Soil	LETLENSERLQTRNQTLESENEMLREEVARLRHKVDMLQTDRSEMVAAFNDLAGHVTQVVDHILQKSEDGENLK*
Ga0137451_12443201	3300011438	Soil	TGNVKGAPHTMTANSAPELARWLSDGQRLFGVCLETLENSTRLQSENDMLREEVARLRHRVDVLQADRAEMVAAFNDLAGHVTQVVDHFIQKSEDGEGAK*
Ga0137379_108893351	3300012209	Vadose Zone Soil	MTANSPELARWLADGQRLFSVCLETLETSERLQTRNQTLESENEMLREEVARLRHKVDMLQTDRSEMVAAFNDLAGHVTQVVDHILQKSEDGENSK*
Ga0137369_102480141	3300012355	Vadose Zone Soil	AAGDTTKGIDHIMTESAPPELVRWLTDGQRFFGMCLELVEKADTLQARSRSLEAENEMFREEVARLRHRADLLQSERSDMIAAFNDLAGHVTQVVDHILQKSENGEDAEKNLG*
Ga0137360_107171201	3300012361	Vadose Zone Soil	FSLCLEQLGRADHLEARARTLEAENEMLREEMARLRHKADVLQTDRSEMVAAFNDLAGHVTQVVDHILQKSEDGENSR*
Ga0137359_100579153	3300012923	Vadose Zone Soil	SGHAAKKRIDDTMTDSAPPELARWLADGQRFFSLCLEQLGRADHLEARARTLEAENEMLREEMARLRHKADLLQTDRAEMVAAFNDLAGHVTQVVDHILQKSEDGENST*
Ga0137359_102615542	3300012923	Vadose Zone Soil	SGHAAKKRIDDTMTDSAPPELARWLADGQRFFSLCLEQLGRADHLEARARTLEAENEMLREEMARLRHKADMLQTDRSEMVAAFNDLAGHVTQVVDHILQKSEDGENSK*
Ga0153915_101496552	3300012931	Freshwater Wetlands	MTANSASELSRWLADGQRLFGVCLSMVEGFERLEARARTLESENEILREEVGRLRDKVDGLQAERSEMIATFNDLAGHVTQVVDQILQKSENGEEEGAK*
Ga0164302_115480071	3300012961	Soil	TANSAPELARWLAEGQRLFGVCLETLENFERVNSRIQTLETENEILREELARLRHRTDMLQAERSEMVAVFNDLAGHVNQVVDNILQKSEDDENSRH*
Ga0157373_113048981	3300013100	Corn Rhizosphere	GVGASEAGQAKGLNQTMTANSAPELARWLAEGQRLFGVCLETLENFERVNSRIQTLETENEILREELARLRHRTDMLQAERSEMVAVFNDLAGHVTQVVDHILQKSEDDENSRH*
Ga0180066_10445251	3300014873	Soil	WLSDGQRLFGVCLETLENSTRLQSENDMLREEVARLRHRVDVLQADRAAMVAAFNDLAGHVTQVVDHIIQKSEDGEGTK*
Ga0180094_10844752	3300014881	Soil	MTANSAPELARWLVDGQRLFGVCLETLEQAGRLQARNETLESENAMLREEVARLRHRADVLQADRAEMVAAFNDLAGHVTQVVDHILQKSEDGENGKPE*
Ga0132256_1002956802	3300015372	Arabidopsis Rhizosphere	SDSAPAELMQWLSEGQRFFSLCQDQLARTDHLEAKARTLEAENEMLREEMARLRHRVDMLQTDRSEMVAAFNDLAGHVTQVVDHILQKSENGEETK*
Ga0187824_101072571	3300017927	Freshwater Sediment	TAPPELVRWLADGQRFFGLCLEQLGRADQLEAKARTLEAENEMLREEMARLRHKVDMLQTDRSEMVAAFNDLAGHVTQVVDHILQKSEDGENSK
Ga0187821_100925311	3300017936	Freshwater Sediment	PELVRWLADGQRFFSLCLEQLGRADHLEAKARTLEAENEMLREEMARLRHKVDMLQTDRSEMVAAFNDLAGHVTQVVDHILQKSEDGENSK
Ga0187780_109139511	3300017973	Tropical Peatland	CLELVEKANRLQAKTSTLEAENEMLREEVARLRHRMDLLQTERADMVAAFNDLAGHVTQVVDHILQKSENGESEKGQA
Ga0184610_10439241	3300017997	Groundwater Sediment	MTEDSAPELLRWLADGQRLFRLCVETLEGSDRLQTRNQTLENENEILREEVARLRHKIDRLETDRAEMIAGFNDLAGHVTQVVDHILQKSEDGETT
Ga0184608_103557491	3300018028	Groundwater Sediment	RWLTDGQRFFGICLELIEKADRLQARTRSLEAENEMFREEIARLRHRADLLQNERSDMIAAFNDLAGHVTQVVDHILQKSENGEDAEKDLG
Ga0187787_103566661	3300018029	Tropical Peatland	TECLEILEGSERLQARSQTLESENEMLREEVARLRQRVDVLEADRSDMVAAFNDLAGHVTQVVDHILQKSEEGENGK
Ga0184623_103940731	3300018056	Groundwater Sediment	MTEDSAPELLRWLADGQRLFRRCVETLEGSDRLQTRNQTLENENDILREEVARLRDKIDRLETDRAEMIAGFNDLAGHVTQVVDHILQKSEDGETT
Ga0187765_101627092	3300018060	Tropical Peatland	ELVEKTNRLHAKTSTLEAENEMLREEVARLRHKMDLLQTERADMVAAFNDLAGHVTQAVDPILQKSENGESEKGQI
Ga0184618_103155961	3300018071	Groundwater Sediment	PRVVGRVVHVDREKGTRPTMTANSAPELTRWLTEGQRLFGVCLEALEQFERLQARNQTLEAENEMLREEVARLRQRADVLQGDRSEMIAAFNDLAGHVTQVIDHILQKSEDGENSK
Ga0184632_101092891	3300018075	Groundwater Sediment	TERSAPELARWLADGQRLFRVCLETLEGSEQLQARNDTLESENLLLREEVARLRHKTDMLQTERMEMVAAFNDLAGHVTEVVDHILEKSADGEDGHDGQSEESTSM
Ga0184632_103906431	3300018075	Groundwater Sediment	MTEHSAPELARWLADGQRFFRLCLETLESVDRLRSGSQTLESENEILREEVVRLRHKADMLETARAEMIAAFNDLAGHVTQAVDHILQRSEDGETTK
Ga0184629_103437201	3300018084	Groundwater Sediment	GVTLTMATDSTSDLTRWLAEGQRFFGLCLETVENADRLQARNQTLERENDMLREEVTRLRQRIDVLQADRNDMVAAFNDLAGHVTQVVDHILQKSEDGENGR
Ga0187893_102186271	3300019487	Microbial Mat On Rocks	MTAHTAPEMARWLSEGQRLFGSCLETLESFDRLQSENEMLREEVARLRHRVDVLQGDRAEMVAAFNDLAGHVTQVVDHIIQKSEDGERPS
Ga0137408_11717691	3300019789	Vadose Zone Soil	DPGTHSSGSVARPPEVSTTGGDTTKGIDDIMTESAPPELVRWLTDGQRFFGMCLELIEKADRLQARTRSLEAENEMFREEIARLRHRADLLQNERSDMIAAFNDLAGHVTQVVDHILQKSENGEDAEKDLG
Ga0193727_11403541	3300019886	Soil	KGIDDIMTESAPPELVRWLTDGQRFFGMCLELIEKADRLQARTRSLEAENEMFREEIARLRHRADLLQNERSDMIAAFNDLAGHVTQVVDHILQKSENGEDAEKDLG
Ga0193726_10577432	3300020021	Soil	LENSERLQTRNQTLESENEMLREEVARLRHKVDILQTDRSEMVAAFNDLAGHVTQVVDHILQKSEDSENSK
Ga0193733_10560651	3300020022	Soil	SSGAELTRWLTEGQRLFGVCLEALEQFERLQARNQTLEAENEMLREEVARLRQRADVLQGDRSEMIAAFNDLAGHVTQVIDHILQKSEDGENSK
Ga0193716_10789131	3300020061	Soil	LFGVCLETLEQHERLKARNQTLEAENEMLREEVARLRQRADTLQGDRSEMIAAFNDLAGHVTQVIDHILQKSEDGENGETPK
Ga0180109_10315151	3300020067	Groundwater Sediment	MTANSAPELARWLVDGQRLFGVCLETLEQAGRLQARNETLESENAMLREEVARLRHRADVLQADRAEMVAAFNDLAGHVTQVVDHILQKSEDGENGKPE
Ga0187768_10754461	3300020150	Tropical Peatland	LADGQRFFSLCLELVEKTNRLHAKTSTLEAENEMLREEVARLRHKMDLLQTERADMVAAFNDLAGHVTQVVDHILQKSENGESEKGEA
Ga0210408_114975171	3300021178	Soil	RTDQLEAKARTLEAENEMLREEMARLRHRMDMLQTDRSEMVAAFNDLAGHVTQVVDHILQKSENGEETK
Ga0210384_100241285	3300021432	Soil	QRFFSLCLELIEKSNRLEAKTSTLEAENEMLREEVARLRHKTDLLQTERSDMVAAFNDLAGHVTQVVDHILQKSENGETENGDTPKEPRQD
Ga0210384_108289021	3300021432	Soil	DGQRFFSLCLEQLGRTDHLEAKARTLEAENEMLREEMARLRHRMDMLQTDRSEMVAAFNDLAGHVTQVVDHILQKSENGEETK
Ga0210409_105286211	3300021559	Soil	FFSLCLEQLGRTDHLEAKARTLEAENEMLREEMARLRHRMDMLQTDRSEMVAAFNDLAGHVTQVVDHILQKSENGEETK
Ga0242665_102131381	3300022724	Soil	SPITSRSRRPAKKGIADTMSDSAPAELMRWLSDGQRFFSLCLEQLGRTDQLEAKARTLEAENEMLREEMARLRHRMDMLQTDRSEMVAAFNDLAGHVTQVVDHILQKSENGEETK
Ga0210131_10475921	3300025551	Natural And Restored Wetlands	AVLAGTPRRQSLRRPRINRTMRDHSASELARWLAEGQRLFRVCLETLQRSEQLQGRNQTLESENEMLREEVARLRRRVDLLQAERTEMVATFNDLAGHVTQVVDHILQKSEEDETSS
Ga0210073_11302051	3300025569	Natural And Restored Wetlands	PGNRHISGAVLAGTPRRQSLRRPRINRTMRDHSASELARWLAEGQRLFRVCLETLQRSEQLQGRNQTLESENEMLREEVARLRRRVDLLQAERTEMVATFNDLAGHVTQVVDHILQKSEEDETSS
Ga0210138_10690482	3300025580	Natural And Restored Wetlands	MRDHSASELARWLAEGQRLFRVCLETLQRSEQLQGRNQTLESENEMLREEIARLRRRVDLLQAERTEMVATFNDLAGHVTQVVDHILQKSEEDETSS
Ga0207653_100975892	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	LCLEQLGRADHLEARARTLEAENEMLREEMARLRHKADMLQTDRSEMVAAFNDLAGHVTQVVDHILQKSEDGENSK
Ga0207646_100835152	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VSGTPRAGGVPTLENSDRLQARNHTVESENEMLREEVARLRHKVDLLQTDRAEMVAACNDLASHVTQVVDHILQKSENSENEK
Ga0207686_109592092	3300025934	Miscanthus Rhizosphere	MSDSAPAELMQWLSEGQRFFSLCQDQLARTDHLEAKARTLEAENEMLREEMARLRHRVDMLQTDRSEMVAAFNDLAGHVTQVVDHILQKSENGEETK
Ga0207691_108302211	3300025940	Miscanthus Rhizosphere	RFFSLCQDQLARTDHLEAKARTLEAENEMLREEMARLRHRVDMLQTDRSEMVAAFNDLAGHVTQVVDHILQKSENGEETK
Ga0207708_106224874	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MTANSAPELARWLAEGQRLFGVCLETLENFERVNSRIQTLETENEILREELARLRHRTDMLQAERSEMVAVFNDLAGHVTQVVDHILQKSEDDENSRH
Ga0257157_10607251	3300026496	Soil	MTANSPELARWLADGQRLFSVCLETLENSERLQTRNQTLESENEMLREEVARLRHKVDMLQTDRSEMVAAFNDLAGHVTQVVDHILQKSEDGENSR
Ga0257165_10321242	3300026507	Soil	EHLQIRNQTLASENDMLREELSRLRHKVDGLQADRSEMIAAFNDLAGHVTQVIDHILQKSEDGENSK
Ga0179593_10339791	3300026555	Vadose Zone Soil	MTANSPELARWLADGQRLFSVCLETLENSERLQTRNQTLESENEMLREEVARLRHKVDMLQTDRSEMVAAFNDLAGHVTQVVDHILQKSEDGENSK
Ga0179587_102669402	3300026557	Vadose Zone Soil	LARWLADGQRLFSVCLETLENSERLQTRNQTLESENEMLREEVARLRHKVDMLQTDRSEMVAAFNDLAGHVTQVVDHILQKSEDGENSK
Ga0209887_10256012	3300027561	Groundwater Sand	ERVQSRNQTLESENEMLREEVARLRHKVDVLQADRSEMVAAFNDLAGHVTQVVDHILQKSEDGESSPK
Ga0209283_107803741	3300027875	Vadose Zone Soil	NAGKGVTLTMATDSTSDLTRWLAEGQRFLGLCLETVENAHRLQARNQTLERENEMLREEVSRLRLRIDVLQADRNDMVAAFNDLAGHVTQVVDHILQKSEDGENGR
Ga0209590_101341562	3300027882	Vadose Zone Soil	RWLAEGQRLFGLCLEALERTERLEARIQTLESENEMLREEIPRLRHKVDVLQEERAEMVAAFNDLAGHVTQVVDGMLQKSEDGELGK
Ga0207428_112398972	3300027907	Populus Rhizosphere	WLSEGQRFFSLCQDQLARTDHLEAKARTLEAENEMLREEMARLRHRVDMLQTDRSEMVAAFNDLAGHVTQVVDHILQKSENGEETK
Ga0209382_105610921	3300027909	Populus Rhizosphere	AGETTKGIDDTMTDSAPPELVRWLTDGQRFFGMCLELIERTDRLQDRTRSLEVENEMLREEVTRLRHKVDLLQTERSDMVAAFNDLAGHVTQVVDHIIQKSEDGEGAK
Ga0209583_101080812	3300027910	Watersheds	DHLDAKARTLESENEMLREEMARLRHTVDMLQTDRSEMVAAFNDLAGHVTQVVDHILQKSEDGENSK
Ga0209857_10340142	3300027957	Groundwater Sand	GVCLETLESFERVQSRNQTLESENEMLREEVARLRHKVDVLQADRSEMVAAFNDLAGHVTQVVDHILQKSEDGESSPK
Ga0247675_10763951	3300028072	Soil	LPMTANSPELARWLADGQRLFSVCLETLQNSERLQTRNQTLESENEMLREEVARLRHKVDMLQTDRSEMVAAFNDLAGHVTQVVDHILQKSEDGENSK
Ga0268265_102850971	3300028380	Switchgrass Rhizosphere	MTANSSSDLARWLADGQRFFGVCLQTLENAEELRIRNQTLEGENDMLREEISRLRHKAEGLQADRSEMIAAFNDLAGHVTQVVDHILQKSEDGENGGGVK
Ga0307282_106619321	3300028784	Soil	VVHVDREKGTRPTMTANSAPELTRWLTEGQRLFGVCLEALEQFERLQARNQTLEAENEMLREEVARLRQRADVLQGDRSEMIAAFNDLAGHVTQVIDHILQKSEDGENSK
Ga0307504_101605451	3300028792	Soil	GRGPADGKAKGTPDAMTLNSPELARWLADGQRLFGVCLETLENSERLQARNQTLESENEMLREEVARLRHKADMLQTDRSEMVAAFNDLAGHVTQVVDHILQKSEDGENSK
Ga0307281_102955111	3300028803	Soil	LTMATDSTSDLTRWLAEGQRFFGLCLETVENADRLQARNQTLERENEMLREEVTRLRLRIDVLQADRNDMVAAFNDLAGHVTQVVDHILQKSEDGENGR
Ga0307304_105312381	3300028885	Soil	MTANSAPELTRWLTEGQRLFGVCLEALEQFERLQARNQTLEAENEMLREEVARLRQRADVLQGDRSEMIAAFNDLAGHVTQVIDHILQKSEDGENSK
Ga0299907_113490741	3300030006	Soil	MTTNSSSELARWLADGQRLFGVCLQTVENAEHLQTRNRTLESENDMLREELSRLRQKVDGLQADRSEMIAAFNDLAGHVTQVVDHILQKSENGENST
Ga0307469_111003921	3300031720	Hardwood Forest Soil	GHAKGSTHAMTANASPELARWLADGQRLFAVCLETLENSERLQARNQTLESENEMLREEVARLRQKVDVLQADRSEMVAAFNDLAGHVTQVVDHILQKSEDGEAAK
Ga0307468_1017151021	3300031740	Hardwood Forest Soil	GAGTEAAQPKGSAPIMSANSAPELARWLADGQRFFGMCLDTIEQLERLQARNHTLESENAMLREEVARLRQRMDVLQADRTEMVAAFNDLAGHVTQVVDRIIQKSEDGEGAK
Ga0310892_108208741	3300031858	Soil	SRSRRLAKKGIPDTMSDSAPAELMRWLSEGQRFFSLCQDQLARTDHLEAKARTLEAENEMLREEMARLRHRVDMLQTDRSEMVAAFNDLAGHVTQVVDHILQKSENGEETK
Ga0214473_117758591	3300031949	Soil	DAAQPKGTVATMTANSAPELARWLADGQRFFGMCLDTIEQLDRLQTRSHTLEGENAMLREEVARLRHRMDVLQADRAEMVAAFNDLAGHVTQVVDHILLKSEDGENGAK
Ga0307471_1010032861	3300032180	Hardwood Forest Soil	SPITSRSRRPAKKGIADTMSDSAPAELMRWLSDGQRFFSLCLEQLGRTDHLEAKARTLEAENEMLREEMARLRHRVDMLHTDRSEMVAAFNDLAGHVTQVVDHILQKSENGEETK
Ga0307471_1010156501	3300032180	Hardwood Forest Soil	WLADGQRLFGVCLETLENSERLQVRNQTLESENEMLREEVTRLRHKADMLQTDRSEMVAAFNDLAGHVTQVVDHILQKSEDGENSK
Ga0335085_102179192	3300032770	Soil	RRLFSECLDILENSERLQTRNQTLESENEMLREEVARLRQKVDVLETDRSEMVAAFNDLAGHVTQVVDHILQKSEDGENGK
Ga0335084_106287712	3300033004	Soil	RLFSECLDILENSERLQTRNQTLESENEMLREEVARLRQKVDVLETDRSEMVAAFNDLAGHVTQVVDHILQKSEDGENGHENEKQM
Ga0316620_112324691	3300033480	Soil	MTANSASELSRWLADGQRLFGVCLSMVEGFERLEARARTLESENEILREEVGRLRDKVDGLQAERSEMIATFNDLAGHVTQVVDQILQKSENGEEEGAK
Ga0316628_1021171652	3300033513	Soil	MTANSASELSRWLADGQRLFGVCLSMVEGFERLEARARTLESENEILREEVGRLRDKVDGLQAERSEMIATFNDLAGHVTQVVDQILQKSENGEEEG
Ga0326723_0233839_58_357	3300034090	Peat Soil	MTANSASELSQWLADGQRLFGVCLSMVEGFERLEARARTLESENEILREEVGRLRDKADGLQAERSEMIATFNDLAGHVTQVVDQILQKSENGEEEGAK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086977

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences