Metagenome / Metatranscriptome Family F086926

Overview

Basic Information

• Family ID: F086926
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 110
• Average Sequence Length: 64 residues
• Representative Sequence: MKIEQIETTVLEMPYTKPLVTATNNFTVARGLLVKVITDGGLEGYGYSDLFPRTGETPETARHV
• Number of Associated Samples: 98
• Number of Associated Scaffolds: 110

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 95.45 %
• % of genes near scaffold ends (potentially truncated): 95.45 %
• % of genes from short scaffolds (< 2000 bps): 82.73 %
• Associated GOLD sequencing projects: 96
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (99.091 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (10.909 % of family members)
• Environment Ontology (ENVO): Unclassified (37.273 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Plant → Plant rhizosphere (38.182 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 0.00%
  β-sheet: 29.35%
  Coil/Unstructured: 70.65%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF02310	B12-binding	8.18
PF00856	SET	3.64
PF04055	Radical_SAM	2.73
PF00528	BPD_transp_1	2.73
PF12681	Glyoxalase_2	2.73
PF07883	Cupin_2	1.82
PF01797	Y1_Tnp	1.82
PF01863	YgjP-like	1.82
PF13531	SBP_bac_11	1.82
PF00903	Glyoxalase	1.82

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG1451	UTP pyrophosphatase, metal-dependent hydrolase family	General function prediction only [R]	1.82
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	1.82
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.91
COG1404	Serine protease, subtilisin family	Posttranslational modification, protein turnover, chaperones [O]	0.91
COG4279	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	0.91
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.91
COG4715	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	0.91
COG5431	Predicted nucleic acid-binding protein, contains SWIM-type Zn-finger domain	General function prediction only [R]	0.91

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.09 %
Unclassified	root	N/A	0.91 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.09 %
Unclassified	root	N/A	0.91 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.09 %
Unclassified	root	N/A	0.91 %

Level 4

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	43.64 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	16.36 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.82 %
Unclassified	root	N/A	0.91 %

Level 5

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	40.91 %
Unclassified	root	N/A	0.91 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	16.36 %

Level 6

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.91 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	40.91 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.91 %
Unclassified	root	N/A	0.91 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	16.36 %

Level 7

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.91 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.91 %
Unclassified	root	N/A	0.91 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	35.45 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	16.36 %

Level 8

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	34.55 %
Deltaproteobacteria bacterium RBG_16_58_17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_58_17	0.91 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.91 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.91 %
Unclassified	root	N/A	0.91 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	16.36 %

Level 9

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	34.55 %
Deltaproteobacteria bacterium RBG_16_58_17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_58_17	0.91 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.91 %
Lentzea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Lentzea	0.91 %
Unclassified	root	N/A	0.91 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	16.36 %

Level 10

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	34.55 %
Deltaproteobacteria bacterium RBG_16_58_17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_58_17	0.91 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.91 %
Lentzea albidocapillata	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Lentzea → Lentzea albidocapillata	0.91 %
Unclassified	root	N/A	0.91 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	16.36 %

Associated Scaffolds

Scaffold	Taxonomy	Length
2228664021|ICCgaii200_c0761549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1601
3300000787|JGI11643J11755_11452663	All Organisms → cellular organisms → Bacteria → Proteobacteria	749
3300000787|JGI11643J11755_11622312	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1367
3300000789|JGI1027J11758_13041984	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	514
3300002123|C687J26634_10147870	All Organisms → cellular organisms → Bacteria	819
3300004024|Ga0055436_10044164	All Organisms → cellular organisms → Bacteria	1189
3300004463|Ga0063356_100697836	All Organisms → cellular organisms → Bacteria	1395
3300004778|Ga0062383_10494588	All Organisms → cellular organisms → Bacteria	612
3300005295|Ga0065707_10049174	All Organisms → cellular organisms → Bacteria	855
3300005332|Ga0066388_101552882	All Organisms → cellular organisms → Bacteria	1161

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.64%
Host-Associated	Host-Associated	26.36%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	24.55%
Plants	Host-Associated → Plants	26.36%
Terrestrial	Environmental → Terrestrial	49.09%

Category

Habitat	Taxonomy	Distribution
Floodplain	Environmental → Terrestrial → Floodplain	1.82%
Freshwater	Environmental → Aquatic → Freshwater	7.27%
Marine	Environmental → Aquatic → Marine	1.82%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.00%
Sediment	Environmental → Aquatic → Sediment	14.55%
Soil	Environmental → Terrestrial → Soil	47.27%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.91%

Type

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.45%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.91%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.91%
Lake	Environmental → Aquatic → Freshwater → Lake	0.91%
Loam	Environmental → Terrestrial → Soil → Loam	6.36%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.73%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.36%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.18%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	14.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.91%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.64%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.73%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.91%

Subtype

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.64%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.27%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.73%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.91%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	14.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.45%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.73%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.82%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.91%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.91%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.91%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.91%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.91%

Habitat

Habitat	Taxonomy	Distribution
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.91%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.91%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.73%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.91%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.82%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.82%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.36%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.91%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.82%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.91%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.82%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	1.82%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.82%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.91%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.91%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.82%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	7.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.82%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.82%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	0.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.82%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.91%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.91%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.45%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.91%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental
3300002123	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_3	Environmental
3300004024	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2	Environmental
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_07615493	2228664021	Soil	MKIETIETTILEMPYTKPLITATNHFTVARGLLVKVVTDGGLPGYGYSDLFPRTGETAETARHVIDAVLEPKVNGR
JGI11643J11755_114526631	3300000787	Soil	MKIARIETRALEMPYTKPLVTATNNFTIARGLLVTVETDGGAQGYGYSDLFPRAGETP
JGI11643J11755_116223121	3300000787	Soil	MKIETIETTILEMPYTKPLITATNHFTVARGLLVKVVTDGGLPGYGYSDLFPRTGETAETARHVIDAVLEPKV
JGI1027J11758_130419841	3300000789	Soil	MKIEQIKTXVLEMPYKKPLVTATNNFTVARGLLVKVMTDHGVEGYGYSDLFPRTGETP
C687J26634_101478701	3300002123	Soil	MKIAQIETRPLEMPYTRPLVAATNNFTVARGLLVKAVMDAGVEGYGYSDLSRQLI*
Ga0055436_100441641	3300004024	Natural And Restored Wetlands	MKIAQIETRMFEMPCTKPLVTATNNFTVGRGLLVKAVTDDGVEGYGYSDLFSRTGETSETTR
Ga0063356_1006978362	3300004463	Arabidopsis Thaliana Rhizosphere	MKIEKIETRVLEMPYTKPLVTATNNFTVARGLLVTVGTDRGTEGYGYSDLFPRTGETPETAQHVIQSVLKS
Ga0062383_104945882	3300004778	Wetland Sediment	MKVESIDTKMLEMPYTKPLVTATNNFTVARGLLVTVVTNGGVEGYGYADLFPRSGET
Ga0065707_100491742	3300005295	Switchgrass Rhizosphere	MTIGKVTGVETSLLEMPYTKPLVTATNNFTVARGLLAKVITDGGIEGYGYSDLFPRTGETPQTAQHVIDTVLKP
Ga0066388_1015528822	3300005332	Tropical Forest Soil	VKIEYVETTVLEMPYNKPLVTATNNFTVARGLLVKVVTDAGVEGYGYSDLFPRTGETPETARHT
Ga0066388_1026469951	3300005332	Tropical Forest Soil	MKIEQIETTVLEMPYKKPLVTATNNFTVARGLLVKVVTDAGVEGYGYSDLFPRTGETP
Ga0070666_100396065	3300005335	Switchgrass Rhizosphere	MKIGKVTNIETTSLEMPYTKPLVTATNNFTVARGILVKVITEGGIEGYGYSDLFPR
Ga0070680_1018084892	3300005336	Corn Rhizosphere	MIFIEPKEPEMKIARIETRALEMPYTKPLVTATNNFTIARGLLVTVETDGGAQGYGYSDLFPRAGETPETAQ
Ga0070671_1000376041	3300005355	Switchgrass Rhizosphere	MKIGKVTNIETTSLEMPYTKPLVTATNNFTVARGILVKVITEGGIEGYGYSDLFPRT
Ga0070671_1003609551	3300005355	Switchgrass Rhizosphere	MKIGKVTNIETTVLEMPYTKPLVTATNNFTVARGILVKVITEGGIEGYGYSDLFPRT
Ga0070705_1000769644	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MKIGKVTNIETTSLEMPYTKPLVTATNNFTVARGILVKVITEGGIEGYGYSDLFPRTGETPQTAQHV
Ga0070705_1016514711	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MKVIQVETTVLEMPYTKPLVTATNNFTVARGVLAKVVTNTGVEGYGYADLFPRT
Ga0070706_1011470932	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VKIDQIETTKLEMPYTKPLVTATNNFTVARGLLVKVVSNGGTEGYGYADLFPRTGETPETAQHVIESVLKSQVIGK
Ga0070672_1000785054	3300005543	Miscanthus Rhizosphere	MKIGKVTNIETTSLEMPYTKPLVTATNNFTVARGILVKVITEGGIEGYGYSDLFPRTGETPQTAQ
Ga0068866_113158532	3300005718	Miscanthus Rhizosphere	MKIGKVTNIETTSLEMPYTKPLVTATNNFTVARGILVKVITEGGIEGYGYSDLFPRTGET
Ga0074479_103437851	3300005829	Sediment (Intertidal)	MKIETIATKKLEMPYTKPLVTATNNFTVARGLLVTVVTNGGVEGYGYADLIIQP
Ga0068860_1008321162	3300005843	Switchgrass Rhizosphere	MKISKVTGVETSLLEMPYTKPLVTATNNFTVARGLLVKVITDGGIEGYGYSDLFPRTGETPQTAQH
Ga0066652_1018280061	3300006046	Soil	MKIGKVAEVETTVLEMPYTKPLVTATNNFTVARGLLVKVITDGGIEGYGYSDLFPRTGETP*
Ga0066658_102954151	3300006794	Soil	VKINEIETTVLEMPYTKPLITATNNFTVARGVLVKAVTNGGEGYGYADLFPRTGETPETARHAIDILKPKVVGREL
Ga0075421_1002570271	3300006845	Populus Rhizosphere	MRIEQIETTVLEMPYTKPLVTATNNFTVARGLLVKVITDGGLEGYGYSDLFP
Ga0075431_1007754511	3300006847	Populus Rhizosphere	MRIERVETKKLEMPYTKPLVTATNNFTVARGLLVTVGTSGGVEGYGYSDLFPRAGETPETAQHVIES
Ga0075429_1005560871	3300006880	Populus Rhizosphere	MKIETVETTVLEMPYTKPLITATNHFTVARGLLVKVVTDRGAQGYGYSDLFPRTGETPETARHVIDAVLKPKITGRELED
Ga0105095_108376722	3300009053	Freshwater Sediment	MKIAQIETQALEMPYTKPLVTATNNFTVARGLLVKVITDGGMEGYGYSDLFPRTGETPQTAQHV
Ga0111539_101461911	3300009094	Populus Rhizosphere	MKIGKVTNIETTVLEMPYTKPLVTATNNFTVAHGILVKVSSGGGIEGYGYSDRCPRTGETPQTAQHVIDSVL
Ga0111539_102113631	3300009094	Populus Rhizosphere	MSKVTGVETSPIEMPYTKPLVTATNNFTVARGLLAKVITDGGIEGYGYSDLFPRTGETPQ
Ga0075418_103639821	3300009100	Populus Rhizosphere	MRIEQIETTVLEMPYTKPLVTATNNFTVARGLLVKVITDGGLEGYGYSDLFPRTGET
Ga0075418_123729541	3300009100	Populus Rhizosphere	VKIEQIETTVLEMPYTKPLVTATNNFTVARGLLVKVITDGGLEGYGYSDLFPRTGET
Ga0114129_101670111	3300009147	Populus Rhizosphere	MKIDTIETTVLEMPYEKPLVTATNNFTVARGLLVKVITDGGLEGYGYSDLFPRTGET
Ga0114129_106498562	3300009147	Populus Rhizosphere	VKIEQIETTVLEMPYTKPLVTATNNFTVARGLLVKVITDGGLEGYGYSDLFPRTG
Ga0114129_107821342	3300009147	Populus Rhizosphere	VKIDQIETTKLEMPYTKPLVTATNNFTVARGLLVKVVSNGGTEGYGYADLFPRTGETP
Ga0114129_133360681	3300009147	Populus Rhizosphere	VKIEQIETTVLEMSYTKPLVTATNNFTVARGLLVKVVTDGGLEGYGYSDLFPRTGETPETARHVIESVLRVKV
Ga0126305_108252961	3300010036	Serpentine Soil	MKIEKIDTKKLEMPYTKPLVTATNNFTVARGLLVTVVTNGGVEGYGYADLFPRAGETPET
Ga0126308_103641161	3300010040	Serpentine Soil	MKIEKIDTKKLEMPYTKPLVTATNNFTVARGLLVTVVTNGGVEGYGYADLFPR
Ga0126382_108354482	3300010047	Tropical Forest Soil	MHRLVLEERAVKIEQIETTVLEMPYKKPLVTATNNFTVARGLLVKVVTDAGVEGYGYSDLFPRTGETPQTARHTIEEIL
Ga0126372_100244311	3300010360	Tropical Forest Soil	MRIEQIETTVLEMPYTKPLVTATNYFTVAGGVLAKVVTDTGMEGYGYADLFPRTGETPETARHAIDILKPKVV
Ga0126377_133458622	3300010362	Tropical Forest Soil	VKIEQIETTVLEMPYIKPLVTATNNFTVARGILAKVVTDTAVEGYGYADLFPRTGETPETAR
Ga0126383_117691282	3300010398	Tropical Forest Soil	MKIVKIETIVLEMPYKKPLVTATNNFTVARGLLVKVMTDHGVEGYGYSDLFPRTGETPETARHV
Ga0134122_101010003	3300010400	Terrestrial Soil	MTISKVTGVETSLLEMPYTKPLVTATNNFTVARGLLAKVITDGGIEGYGYSDLFPRTGETPQTAQHVIDTVLKP
Ga0134123_103042191	3300010403	Terrestrial Soil	MKIGKVTNIETTILEMPYTKPLVTATNNFTVARGILVKVITEGGIEGYGYSDL
Ga0137315_10600502	3300011395	Soil	MKIERVETKKLEMPYAKPLVTATNNFTVARGLLVTVGTNGGVEGYGYSDLFPRAGETPETAQ
Ga0137446_10486451	3300011419	Soil	MTMKIERVETKKLEMPYTKPLVTATNNFTVARGLLVTVRTNGGVEGYGYSDLFPRA
Ga0137438_12099051	3300011431	Soil	MKIDKIDTKTLEMPYTKPLVTATNNFTVARGLLVTVVTNSGVEGYGYADLFPRAGETAETAQHVIE
Ga0137329_10410211	3300012133	Soil	MKIERVETKKLEMPYTKPLVTATNNFTVARGLLVTVVTQGGVEGYGYADLFPRAGETPETAAHVIETVLKAKA
Ga0137357_11330941	3300012168	Soil	VKINRIETTKLDMPYKKPLVTATNNFTIARGLLVKAVTDEGVEGYGYSDLFPRTGETPESAAHFIDEVLQ
Ga0137382_102794442	3300012200	Vadose Zone Soil	VETEESERMKIGKVGNIETTVLEMPYTKPLVTATNNFTVARGLLVKVITDGGIEGYGYSDLF
Ga0157336_10196191	3300012477	Arabidopsis Rhizosphere	MKIGKVTNIETTVLEMPYTKPLVTATNNFTVARGILVKVITEGGIEGYGYSDL
Ga0157334_10024412	3300012509	Soil	MTIGKVTGVETSLLEMPYTKPLVTATNNFTVARGLLAKVITDGGIEGYGYSDLFPRTGETPQTAQHVIDTVLKPKVVGR
Ga0157332_10333482	3300012511	Soil	MTIGKVTGVETSLLEMPYTKPLVTATNNFTVARGLLAKVITDGGIEGYGYSDLFPRTGETPQTAQHVIDTVLKPKVVG
Ga0157352_10007501	3300012519	Unplanted Soil	MTIGKVTGVETSLLEMPYTKPLVTATNNFTVARGLLAKVITDGGIEGYGYSDLFP
Ga0137358_100962951	3300012582	Vadose Zone Soil	MKIEQIETTVLEMPYTKPLVTATNNFTVARGLLVKVVTDGGSEGYGYSDLFPRTGETPETARHVIES
Ga0137397_100306491	3300012685	Vadose Zone Soil	MKIGKVAGVETTVLEMPYTKPLVTATNNFTVARGLLVKVITDGGVEGYGYSDLFPRT
Ga0137416_116593881	3300012927	Vadose Zone Soil	MKIGKVAGVETSLLEMPYTKPLVTATNNFTVARGLLAKVITDGGIEGYGYSDLFPR
Ga0137407_105619382	3300012930	Vadose Zone Soil	VKIDQIETTKLEMPYTKPLVTATNNFTVARGLLVKVVSNGGAEGYGYADLFPRTGETPGE
Ga0126375_118020492	3300012948	Tropical Forest Soil	VKIEYVETTVLEMPYNKPLVTATNNFTVARGLLVKVVTDAGVEGYGYSDLFPRTGETP
Ga0126369_111382871	3300012971	Tropical Forest Soil	MPYKKPLVTATNNFTVARGLLVKVVTDAGVEGYGYSDLFPRTGETPETARHT
Ga0075314_10010401	3300014265	Natural And Restored Wetlands	MKIGKIAKVETTILEMPYTKPLVTATNNFTVARGLLVKIITDGGIEGYGYSDLFPRSGETPQTAQH
Ga0075306_10772131	3300014297	Natural And Restored Wetlands	MKIERIDTKKLEMPYTKPLVTATNNFTVARGLLVMVVTHEGVEGYGYADLFPRSGETPETARHV
Ga0157380_117318842	3300014326	Switchgrass Rhizosphere	MKIGKVTNIETTSLEMPYTKPWVTATNNFTVARGILVKVITEGGIEGYGYSDLFPRTGETPQTAQHVVDAVLKA
Ga0180074_10464041	3300014877	Soil	MKIAHIETRTLEMPYTKPLITATNNFTVARGLLVRAVTDAGVEGYGYSDLFPRAGETPETARHVIDAVLKPK
Ga0180062_10277532	3300014879	Soil	MKIERVETKKLEMPYIKPLVTATNNFTVARGLLVTVATNGGVEGYGYSDLFPRAGETAETAQH
Ga0180086_10260231	3300014883	Soil	LPRNSIIAALGEIPVKIIRIETTKLDMPYKKPLVTATNNFTVARGLLVKAVTDEGVEGYGYSDLFPRTSETPESAAHFIDVVLKPKVVNRDL
Ga0137418_107096431	3300015241	Vadose Zone Soil	MKIGKVAGVETRLLEMPYTKPLVTATNNFTVARGLLVKVVTDGGIEGYGYSDLFPRTGETPQTAQHVIDTVLR
Ga0132256_1004925463	3300015372	Arabidopsis Rhizosphere	MKIEKIETRVLEMPYTKPLVTATNNFTVARGLLVTVGTDRGTEGYGYSDLFP
Ga0132256_1027939681	3300015372	Arabidopsis Rhizosphere	MTTGKVTGVETSLLAMPYTKPLVTATNNFTVARGLLVKVITDGGIEGYGYSDLFPRTGETPQTAQHVIDTVLKPKVV
Ga0132255_1021516342	3300015374	Arabidopsis Rhizosphere	MTISKVTGVETRLLEMPYTKPLVTATNNFTVARGLLAKVITDGGIEGYGYSDLFPRTGETPQTAQHVIDTVLKPKVVGR
Ga0182039_116990021	3300016422	Soil	MKIGKVVAVETTILEMPYTKPLVTATNNFTVARGILVKVITEGGIEGYGYSDLFPRTGETPQTAQHV
Ga0187822_100475011	3300017994	Freshwater Sediment	MKIGKVAKVETTILEMPYSKPLVTATNNFTVARGLLVKVITEGGIEGYGYSDLFPRTGETPQTAQHVIEAV
Ga0184610_12625821	3300017997	Groundwater Sediment	MKIERIETKKLEMPYTKPLVTATNNFTVARGLLVTVRTNGGVEGYGYSDLFPRAGETPETAEHVIESVLKSKVI
Ga0184638_12849391	3300018052	Groundwater Sediment	MKISSIDTRPLEMPYTKPLVTATNNFTVAHGLLVTVTTDAGIEGYGYSDLF
Ga0184635_101452851	3300018072	Groundwater Sediment	MKIEQIETTVLEMPYTKPLVTATNNFTVARGLLVKVITDGGLEGYGYSDLFPRTGETPETARHV
Ga0184625_105485972	3300018081	Groundwater Sediment	MKIEQIETTVLEMPYTKPLVTATNNFTVARGLLVKVITDGGLEGYGYSDLFPRTGETPETARHVIESVLRAK
Ga0184625_105723982	3300018081	Groundwater Sediment	MRIEQIETTVLEMPYTKLLVTATNNFTVARGLLVKVTTDGGLEGYGYSDLFPRTGETPETARHV
Ga0184625_105812892	3300018081	Groundwater Sediment	MKIDQIETTVLEMPYTKPLVTATNNFTVARGLLVKVITDGGIEGYGYSDLFPR
Ga0184629_101946022	3300018084	Groundwater Sediment	VKINRIETTKLDMPYRKPLVTATNNFTIARGLLVKAVTDEGVEGYGYSDLFPRTG
Ga0066669_123517562	3300018482	Grasslands Soil	VETEESERMKIGKVGNIETTVLEMPYTKRLVTATNNFTVARGLLVKVITDGGIEGYGYSDLFP
Ga0190264_113924371	3300019377	Soil	MKITQVETRALEMPYTKPLVTATNNFTVARGLLVTVVTDGGTQGYGYSDLFPRTGETPETAQHVIQSVLKAKVV
Ga0210379_104615641	3300021081	Groundwater Sediment	VKINRIETTKLDMPYKKPLVTATNNFTIARGLLVKAVTDEGVEGYGYSDLFPRTGETPESAAHFIDVVLKP
Ga0210339_10269411	3300021332	Estuarine	MKIERIETKKLEMPYTKPLVTATNNFTVARGLLVTVVTDHGAEGYGYSDLFP
Ga0193709_10994302	3300021411	Soil	MKISKVTGVETSLLEMPYTKPLVTATNNFTVARGLLVKVITDGGIQGYGYSDLFPRTGETPQTAQHVIDTVLK
Ga0212128_107475151	3300022563	Thermal Springs	MKIEQIETTKLEMPYKKALITATNNFTVARGLLVKAMTDEGVEGYGYSDLFPRTGETPESAAHFI
Ga0209521_100308242	3300025164	Soil	MKIAQIETRTLEMPYTKPLVTATNNFTVARGLLIKAVTDAGVEGYGYSDLFPRSGDAGSRAPRATCCCRG
Ga0209324_100886992	3300025174	Soil	MKIAQIETRTLEMPYTKPLVTATNNFTVARGLLIKAVTDAGVEGYGYSDLFPRSGDAGS
Ga0209519_105865072	3300025318	Soil	MKIGKIANVETQILEMPYSKPLVTATNHFTVARGLLVKVVTEGGIEGYGYSDLFPRTGETPQTAQHVIESVLKTKIV
Ga0207659_101089774	3300025926	Miscanthus Rhizosphere	MKIGKVTNIETTSLEMPYTKPLVTATNNFTVARGILVKVITEGGIEGYGYSDLFPRTGETPQTAQHVID
Ga0207702_108700642	3300026078	Corn Rhizosphere	MKIGKVTNIETTSLEMPYTKPLVTATNNFTVARGILVKVITEGGIEGYGYSDLF
Ga0207676_124706821	3300026095	Switchgrass Rhizosphere	MKIGKVTNIETTVLEMPYTKPLVTATNNFTVARGILVKVITEGGIEGYGYSDLFPRTGE
Ga0209761_12595041	3300026313	Grasslands Soil	VKIDQIETTKLEMPYTKPLVTATNNFTVARGLLVKVVSNGGTEGYGYADLFPRTGETPETAQHLI
Ga0256804_10270591	3300026372	Sediment	MKIEKIDTQKLEMPYTKPLVTATNNFTVARGLLVTVVTNRGVEGYGYADLFPRSGETAET
Ga0256814_10313182	3300026464	Sediment	MKIEKIDTQKLEMPYTKPLVTATNNFTVARGLLVTVVTHGGVEGYGYADLFPRSGETPET
Ga0256867_102777061	3300026535	Soil	MKIGKVATVETKILEMPYTKPLVTATNNFTVARGLLVKVITEGGIEGYGYSDLFPR
Ga0209819_101238452	3300027722	Freshwater Sediment	MKIHQIETKVHEMPYKKPLVTATNNFTVARGLLVKVITDDGVEGYGYSDLFPRTGETPET
Ga0209382_113500671	3300027909	Populus Rhizosphere	MIFIEPKEPEMKIARIETRALEMPYTKPLVTATNNFTIARGLLVTVETDGGAQGYGYSDLFPRAGE
Ga0302046_101127144	3300030620	Soil	MKIGKIAKLETTILEMPYTKPLVTASNNFTVARGLLVKVITDGGIEGYGYSDLFPRTGETPETAQHVIE
Ga0299913_111441191	3300031229	Soil	MKIGKVATVETKILEMPYTKPLVTATNNFTVARGLLVKVITEGGIEGYGYSDLFPRTGETPHTAQHVIESVLK
Ga0310886_106209102	3300031562	Soil	MKIETVETTILEMPYSKPLITATNHFTVARGLLVKVVTDGGVSGFGYSDLFPRTGETAETARHVIDVVLKPKVNGRELEN
Ga0307468_1025175401	3300031740	Hardwood Forest Soil	VRIEQIETTVLEMPYEKPLVTATNNFTVARGLLVKVITDRGVGGYGYSDLFPRTGETPETARHVIESVLRVKV
Ga0307406_106265631	3300031901	Rhizosphere	MKIETVETTILEMPYTKPLITATNHFTVARGLLVKVVTDGGAQGYGYSDLFPRTGETPETAR
Ga0310884_103844991	3300031944	Soil	MTISKVTGVETSLLEMPYTKPLVTATNNFTVARGLLAKVITDGGIEGYGYSDLFPRTGETPQT
Ga0326597_100033318	3300031965	Soil	MKIAQIETRTLEMPYTKPLITATNNFTVARGLLVKAVTDAGVTGYGYSDRSRQLI
Ga0307416_1010778811	3300032002	Rhizosphere	MRIETIETTVLEMPYTTPLITATNHFTVARGLLVKVVTDVGFEGYGYSDLFPRTGETPETARHV
Ga0310899_101326932	3300032017	Soil	MKINQIETTVLDMPYTKPLVTATNNFTVARGLLVKVVTDGAVEGYGYSDLFPRTGETPETARHVI
Ga0315281_102465391	3300032163	Sediment	MKIEKLETKKLAMPYTKPLVTATNNFTVARGLLVTVTTNGGVEGYGYSDLFPRTGETPET
Ga0364928_0078722_2_214	3300033813	Sediment	MKIAQIETRILEMPYTKPLITATNHFTVARGLLVKAVTDAGVEGYGYSDLFPRSGETQETARHLIEAVLKP
Ga0364930_0040290_1_162	3300033814	Sediment	MKIAQIETRLLEMPYTKPLITATNHFTVARGLLVKAVTDAGVEGYGYSDLFPRS
Ga0370498_096373_3_182	3300034155	Untreated Peat Soil	MKIEKITTRKLEMPYTKPLVTATNNFTVARGLLVTVETNGGVEGYGYSDLFPRAGETPET