Metagenome Family F086895

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F086895
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	128 residues
Representative Sequence	MDRRRAPRRLVAAEEPLSRARLRTGGQLRVLDASAWGALAESTERLLPGRQLDVHVVSVQGRVLVRSRVARAFVSRLEAGAVHYRAALAFDHTIDVRADGYAMPMAALPPETAPGSPYPHRAPPGDIEFAEPRSA
Number of Associated Samples	87
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.39 %
% of genes near scaffold ends (potentially truncated)	27.27 %
% of genes from short scaffolds (< 2000 bps)	70.00 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (99.091 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (25.455 % of family members)
Environment Ontology (ENVO)	Unclassified (31.818 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (55.455 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 1.84% β-sheet: 33.74% Coil/Unstructured: 64.42%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF00158	Sigma54_activat	21.82
PF12019	GspH	21.82
PF12836	HHH_3	7.27
PF00005	ABC_tran	5.45
PF10531	SLBB	1.82
PF13807	GNVR	0.91
PF02706	Wzz	0.91
PF07517	SecA_DEAD	0.91
PF01370	Epimerase	0.91
PF02347	GDC-P	0.91
PF00413	Peptidase_M10	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0403	Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain	Amino acid transport and metabolism [E]	0.91
COG0653	Preprotein translocase subunit SecA (ATPase, RNA helicase)	Intracellular trafficking, secretion, and vesicular transport [U]	0.91
COG1003	Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain	Amino acid transport and metabolism [E]	0.91
COG3206	Exopolysaccharide export protein/domain GumC/Wzc1	Cell wall/membrane/envelope biogenesis [M]	0.91
COG3524	Capsule polysaccharide export protein KpsE/RkpR	Cell wall/membrane/envelope biogenesis [M]	0.91
COG3765	LPS O-antigen chain length determinant protein, WzzB/FepE family	Cell wall/membrane/envelope biogenesis [M]	0.91
COG3944	Capsular polysaccharide biosynthesis protein YveK	Cell wall/membrane/envelope biogenesis [M]	0.91
COG5549	Predicted Zn-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	77.27 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.55 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.91 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	75.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.55 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.91 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.91 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	73.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.55 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	1.82 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.91 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.91 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	73.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.55 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	1.82 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.91 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.91 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	73.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.55 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	1.82 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.91 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.91 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	73.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.55 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	1.82 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.91 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.91 %
Unclassified	root	N/A	0.91 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002886\|JGI25612J43240_1001534	All Organisms → cellular organisms → Bacteria	2784	Open in IMG/M
3300003319\|soilL2_10097023	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1115	Open in IMG/M
3300004157\|Ga0062590_103074842	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300004479\|Ga0062595_101777492	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300005171\|Ga0066677_10001918	All Organisms → cellular organisms → Bacteria	7643	Open in IMG/M
3300005175\|Ga0066673_10161708	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1254	Open in IMG/M
3300005178\|Ga0066688_10385259	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	909	Open in IMG/M
3300005180\|Ga0066685_10703305	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693	Open in IMG/M
3300005184\|Ga0066671_10106464	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1565	Open in IMG/M
3300005341\|Ga0070691_10093693	All Organisms → cellular organisms → Bacteria → Proteobacteria	1484	Open in IMG/M
3300005345\|Ga0070692_10879398	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300005356\|Ga0070674_100499360	All Organisms → cellular organisms → Bacteria → Proteobacteria	1013	Open in IMG/M
3300005406\|Ga0070703_10372159	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300005406\|Ga0070703_10601544	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300005436\|Ga0070713_100012996	All Organisms → cellular organisms → Bacteria	6130	Open in IMG/M
3300005438\|Ga0070701_10086163	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1711	Open in IMG/M
3300005440\|Ga0070705_100000216	All Organisms → cellular organisms → Bacteria	34255	Open in IMG/M
3300005440\|Ga0070705_100002854	All Organisms → cellular organisms → Bacteria	8604	Open in IMG/M
3300005440\|Ga0070705_100020976	All Organisms → cellular organisms → Bacteria → Proteobacteria	3468	Open in IMG/M
3300005444\|Ga0070694_100282388	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1266	Open in IMG/M
3300005444\|Ga0070694_100621332	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	872	Open in IMG/M
3300005445\|Ga0070708_100636253	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	1005	Open in IMG/M
3300005445\|Ga0070708_100854630	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	855	Open in IMG/M
3300005445\|Ga0070708_102123541	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300005451\|Ga0066681_10220413	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1141	Open in IMG/M
3300005454\|Ga0066687_10514822	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300005459\|Ga0068867_101974522	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300005468\|Ga0070707_100010095	All Organisms → cellular organisms → Bacteria → Proteobacteria	8787	Open in IMG/M
3300005468\|Ga0070707_101878226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300005471\|Ga0070698_100257093	All Organisms → cellular organisms → Bacteria	1679	Open in IMG/M
3300005518\|Ga0070699_100053577	All Organisms → cellular organisms → Bacteria	3491	Open in IMG/M
3300005518\|Ga0070699_100380608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1274	Open in IMG/M
3300005526\|Ga0073909_10077506	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1270	Open in IMG/M
3300005536\|Ga0070697_100733521	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	873	Open in IMG/M
3300005545\|Ga0070695_100144478	All Organisms → cellular organisms → Bacteria	1654	Open in IMG/M
3300005546\|Ga0070696_100009257	All Organisms → cellular organisms → Bacteria	6595	Open in IMG/M
3300005549\|Ga0070704_100355796	All Organisms → cellular organisms → Bacteria	1237	Open in IMG/M
3300005549\|Ga0070704_100563524	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	997	Open in IMG/M
3300005559\|Ga0066700_10007311	All Organisms → cellular organisms → Bacteria	5491	Open in IMG/M
3300005598\|Ga0066706_11482700	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300005718\|Ga0068866_10722042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300005719\|Ga0068861_101183986	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	738	Open in IMG/M
3300006031\|Ga0066651_10388592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300006796\|Ga0066665_10335955	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1227	Open in IMG/M
3300006852\|Ga0075433_10069269	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3098	Open in IMG/M
3300006854\|Ga0075425_100012072	All Organisms → cellular organisms → Bacteria	9248	Open in IMG/M
3300006854\|Ga0075425_100076555	All Organisms → cellular organisms → Bacteria → Proteobacteria	3777	Open in IMG/M
3300006871\|Ga0075434_100324342	All Organisms → cellular organisms → Bacteria	1560	Open in IMG/M
3300006871\|Ga0075434_100549605	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1174	Open in IMG/M
3300007076\|Ga0075435_100051317	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3322	Open in IMG/M
3300007076\|Ga0075435_100549372	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1000	Open in IMG/M
3300009090\|Ga0099827_10051777	All Organisms → cellular organisms → Bacteria → Acidobacteria	3090	Open in IMG/M
3300009137\|Ga0066709_100273612	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2277	Open in IMG/M
3300009147\|Ga0114129_10063024	All Organisms → cellular organisms → Bacteria	5179	Open in IMG/M
3300009148\|Ga0105243_10017419	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5431	Open in IMG/M
3300009148\|Ga0105243_11957350	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300009162\|Ga0075423_10181217	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2211	Open in IMG/M
3300009176\|Ga0105242_10135581	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2130	Open in IMG/M
3300009176\|Ga0105242_12735550	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300010038\|Ga0126315_11019441	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300010337\|Ga0134062_10503685	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300010400\|Ga0134122_12962536	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300011444\|Ga0137463_1047548	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1594	Open in IMG/M
3300012189\|Ga0137388_10864434	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	837	Open in IMG/M
3300012200\|Ga0137382_11071615	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300012203\|Ga0137399_10037997	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3393	Open in IMG/M
3300012207\|Ga0137381_10328153	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1333	Open in IMG/M
3300012208\|Ga0137376_10360293	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1263	Open in IMG/M
3300012211\|Ga0137377_11907750	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300012360\|Ga0137375_10043461	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	4967	Open in IMG/M
3300012685\|Ga0137397_10029853	All Organisms → cellular organisms → Bacteria	3875	Open in IMG/M
3300012944\|Ga0137410_10031644	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3699	Open in IMG/M
3300015371\|Ga0132258_11510776	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1696	Open in IMG/M
3300015371\|Ga0132258_11798044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1544	Open in IMG/M
3300018083\|Ga0184628_10082129	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1646	Open in IMG/M
3300018482\|Ga0066669_10573517	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	986	Open in IMG/M
3300021082\|Ga0210380_10180602	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	951	Open in IMG/M
3300025910\|Ga0207684_11102202	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300025922\|Ga0207646_10036368	All Organisms → cellular organisms → Bacteria	4445	Open in IMG/M
3300025922\|Ga0207646_10472862	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1130	Open in IMG/M
3300025934\|Ga0207686_10155714	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1596	Open in IMG/M
3300025935\|Ga0207709_11098500	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	653	Open in IMG/M
3300025937\|Ga0207669_10703320	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	831	Open in IMG/M
3300026285\|Ga0209438_1000281	All Organisms → cellular organisms → Bacteria	15010	Open in IMG/M
3300026300\|Ga0209027_1069428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1308	Open in IMG/M
3300026315\|Ga0209686_1018322	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2812	Open in IMG/M
3300026325\|Ga0209152_10084405	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1174	Open in IMG/M
3300027748\|Ga0209689_1099122	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1507	Open in IMG/M
3300027821\|Ga0209811_10020286	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2173	Open in IMG/M
3300027835\|Ga0209515_10026907	All Organisms → cellular organisms → Bacteria	5130	Open in IMG/M
3300027882\|Ga0209590_10133203	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1524	Open in IMG/M
3300028803\|Ga0307281_10068060	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1150	Open in IMG/M
3300028881\|Ga0307277_10043320	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1821	Open in IMG/M
3300031226\|Ga0307497_10025965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1863	Open in IMG/M
3300031720\|Ga0307469_10048733	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2643	Open in IMG/M
3300031740\|Ga0307468_100167699	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1438	Open in IMG/M
3300031740\|Ga0307468_100196133	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1359	Open in IMG/M
3300031820\|Ga0307473_10370758	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	928	Open in IMG/M
3300031820\|Ga0307473_10688626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	716	Open in IMG/M
3300032174\|Ga0307470_10901130	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	695	Open in IMG/M
3300032180\|Ga0307471_100118558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2458	Open in IMG/M
3300032180\|Ga0307471_100644241	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1221	Open in IMG/M
3300032180\|Ga0307471_100833514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1089	Open in IMG/M
3300032180\|Ga0307471_101106200	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	958	Open in IMG/M
3300032180\|Ga0307471_101802976	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	763	Open in IMG/M
3300032205\|Ga0307472_102386819	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300033433\|Ga0326726_10104733	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2537	Open in IMG/M
3300034090\|Ga0326723_0042960	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1903	Open in IMG/M
3300034150\|Ga0364933_102879	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.00%
Host-Associated	Host-Associated	20.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.36%
Plants	Host-Associated → Plants	20.00%
Aquatic	Environmental → Aquatic	3.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.55%
Freshwater	Environmental → Aquatic → Freshwater	1.82%
Sediment	Environmental → Aquatic → Sediment	1.82%
Peat	Environmental → Terrestrial → Peat	1.82%
Floodplain	Environmental → Terrestrial → Floodplain	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.45%
Loam	Environmental → Terrestrial → Soil → Loam	28.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.64%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.82%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.82%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.91%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.91%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.91%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	25.45%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.64%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.91%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.73%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.82%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.82%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.91%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.91%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	25.45%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	10.91%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.18%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.73%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.73%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.82%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.82%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.91%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.91%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.91%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.91%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.91%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.91%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.91%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.91%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002886	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027835	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25612J43240_10015342	3300002886	Grasslands Soil	MDRRRAPRRLVAADEPLSRARLRTGGQLRVLDASAWGALAESTERLLPGRHLDVHVVSVQGRVLVRSRVARAFVSRLDADAVXYRAALAFDRVIEVRADGYPMPVAVLPPDVAPGSPYPHRAPPGDIEFAEQRSA*
soilL2_100970231	3300003319	Sugarcane Root And Bulk Soil	MERRRAPRDRVPGDEPLAGARLRTGGQLRIVDASAWGALAETSERLLPGRQLDVHVISAQGRVLVRSRVARAYVSRLDADCIQYRAALAFDRALDVRADGYVLPAVFAGVEIGSGTRYPATAVVRDIEFQERLSA*
Ga0062590_1030748421	3300004157	Soil	CSDVERRRALRRPVAGHEPLATAKLRAGAQLRVVDASSWGALAETTDRLLPGRQLDVHIVTAEGRVLVRARVARSYVSRLEASAVHYRTALAFDRALDLRAEGYAIPVALCGVEIEQGNRYPAQPSPGDIEFAEPPSG*
Ga0062595_1017774922	3300004479	Soil	TAKLRAGAQLRVVDASSWGALAETTDRLLPGRQLDVHIVTAEGRVLVRARVARSYVSRLEASAVHYRTALAFDRALDLRAEGYAIPVAPRGVEIEQGNRYPAQPSPGDIEFAEPPSG*
Ga0066677_100019187	3300005171	Soil	MERRRALRRFVGAGEPLATARLRTGGQLRILDASSWGALAETTERLLPGRHLDVHIVSAQGRMLVRSRVARAFVARLEADAIHYHAALSFDRALDVRADGYVMPAVLAAVETDRGTRYPLREFAGDIEFTERLSA*
Ga0066673_101617083	3300005175	Soil	MEQRRALRRSVTAGEPLATARLRTGGHLRILDASSWGALAETTERMLPGRQLDVHVVSAQGRVLVRARVARAYVARLEADAVHYEAALAFDRALDVRADGYVMPAELAGVENDPGNRYPPHAVRG
Ga0066688_103852591	3300005178	Soil	VTHERRGAARRLVGDEEPLYRARLRTGSELRVVDASAWGVLAETTERLLPGRHLDVHIISTDGRVLVRSRVARAFVWRLAADVIQYRAALAFERAIGIRASGYAMPAPFLAAGIEPGSAYPDRVAAVDIEFAERLSA*
Ga0066685_107033052	3300005180	Soil	MERRRAHRRLVATDEALCRAKLRTGGELRVLDASSWGALAETTERLLPGRHLDVHIVSSQGRVLVRSRVARAFVSRVEASAIHYRAALAFESGVDVRVEGYPMPATVLAVHIEPGNAYPDRTGSGDIEFAERLSV*
Ga0066671_101064643	3300005184	Soil	MERRRALRRFVGAGEPLATARLRTGGQLRILDASSWGALAETTERLLPGRHLDVHIVSAQGRMLVRSRVARAFVARLEADAIHYHAALSFDRALDVRADGYVMPAVLAAVATDRGTRYPLREFAGDIEFTERLSA*
Ga0070691_100936932	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MDRRRAPRRVVGADEPLSRAKLRTGGQLLVVEASSWGVLTETTERLLPGRHLDVHVVSVQGRVLVRARVARGFVSRLAADAVHYRAALAFDHPIDVRADGYFMPMTPLPAEVAPGNGYPHPVFPGDIEFTERVSA*
Ga0070692_108793981	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MDRRRAPRRLVAAEEPLSRARLRTGGQLRVLDASAWGALAESTERLLPGRQLDVHVVSVQGRVLVRSRVARAFVSRLEAGAVHYRAALAFDHTIDVRADGYAMPMAALPPETAPGSSYPHRAPPGDIEFAEPRSA*
Ga0070674_1004993602	3300005356	Miscanthus Rhizosphere	MDRRRAARRVVGADEPLSRAKLRTGGQLLVVEASSWGVLTETTERLLPGRHLDVHVVSVQGRVLVRARVARGFVSRLEADAVHYRAALAFDRPIDVRADGYFMPMTPLPAEIAPGNGYPHPVFPGDIEFTERVSA*
Ga0070703_103721592	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	RRRAPRRLVAAEEPLSRARLRTGGQLRVLDASAWGALAESTERLLPGRQLDVHVVSVQGRVLVRSRVARAFVSRLEAGAVHYRAALAFDHTIDVRADGYAMPMAALPPETAPGSPYPHRAPPGDIEFAEPRSA*
Ga0070703_106015441	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	GAQLRVVDASSWGALAETTDRLLPGRQLDVHIVTAEGRVLVRARVARSYVSRLEASAVHYRTALAFDRALDLRAEGYAIPVALRGVEIEQGNRYPAQPSPGDIEFAEPPSG*
Ga0070713_1000129967	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSYARLRTGGELRVVDASSWGVLAETRERLLPGRHLDVHVVASNGRVLVRTRVIRAYVCGLQADAIDYRAALAFEQTVDILSMGYAMPAPVLEQTEAPGTSYPSRGQAGDIEFTEPLSA*
Ga0070701_100861634	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MDRRRAPRRVVGADEPLSRAKLRTGGQLLVVEASSWGVLTETTERLLPGRHLDVHVVSVQGRVLVRARVARGFVSRLEADAVHYRAALAFDRPIDVRADGYFMPMTPLPAEIAPGNGYPHPVFPGDIEFTERVSA*
Ga0070705_10000021616	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MDRRRAPRRLVAAEEPLSRARLRTGGQLRVLDASAWGALAESTERLLPGRQLDVHVVSVQGRVLVRSRVARAFVSRLEAGAVHYRAALAFDHTIDVRADGYAMPMAALPPETAPGSPYPHRAPPGDIEFAEPRSA*
Ga0070705_1000028545	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MERRRAPRRVVASDEPLSRAKLRTGGQLLVLDASPWGLLTASTERLLPGRHLDVHVVSVQGRVLVRSRVARAFVSRLEADEVEYRAALAFDRAIDVRADGYVMPAAAPPPEGGEGNRYPHRPPSGDIEFAERLSA*
Ga0070705_1000209764	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MERRKAPRRVVGGEEPLSRARLRTGGQLLVLDASAWGALTESTERLLPGRHLDVHVVSVQGRVLVRSRVARAFVWRLEADSVTYRAALAFERAIDVCADGYVMPVAALPAEIPPGSAYPHRALAGDIEFTERLSA*
Ga0070694_1002823882	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VERRRALRRAVAGHEPLATAKLRAGAQLRVVDASSWGALAETTDRLLPGRQLDVHIVTAEGRVLVRARVARSYVSRLEASAVHYRTALAFDRALDLRAEGYAIPVAPRGVEIEQGNRYPAQPSPGDIEFAEPPSG*
Ga0070694_1006213322	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MERRKAPRRVVGGEEPLSRARLRTGGPLLVLDASAWGALTESTERLLPGRHLDVHVVSVQGRVLVRSRVARAFVWRLEADSVTYRAALAFERAIEVCAAGYVMPAAALPAEIPPGSAYPHRPLAGDIE
Ga0070694_1009278572	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	GVLTETTERLLPGRHLDVHVVSVQGRVLVRARVARGFVSRLAADAVHYRAALAFDRPIDVRADGYFMPMTPLPAEIAPGNGYPHPAFPGDIEFTEHVSA*
Ga0070708_1006362532	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VERRRALRRAVAGHEPLATAKLRAGAQLRVVDASSWGALAETTDRLLPGRQLDVHIVTAEGRVLVRARVARSYVSRLEASRVHYRTALAFDRALDLRAEGYAIPVAPRGVEIEQGNRYPAQPSPGDIEFAEPPSG*
Ga0070708_1008546302	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	RRRAPRRLVAADEPLCQARLRTGAQLCVLDASSWGALAETTERLLPGRHLDVHVVSSQGRVLVRSRVARAFVARLEADAIHYRAALAFDRAIDVRAAGYALPAPFLAVEIDRGNPYPDRAVSTDIEFADGLSA*
Ga0070708_1021235412	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MERRRALRRPVAGDEPLSGARLRTGAQLRIVDASSWGALAETAERLLPGRHLDLHVVSAQGRVLVRARVARAYVSRLEAHAIHYRTALAFDRALDVRVEGYAIPAALPGVEIEQ
Ga0066681_102204131	3300005451	Soil	MERRRAHRRLVATDEALCRAKLRTGGELRVLDASSWGALAETTERLLPGRHLDVHIVSSQGRVLVRSRVARAFVSRVESSAVHYRAALAFESVVDVRVEGYPMPATVLGVHIEPGNAYPDRTGSGDIEFAERLFT*
Ga0066687_105148221	3300005454	Soil	WGALAETTERLLPGRHLDVHIVSAQGRMLVRSRVARAFVARLEADAIHYHAALSFDRALDVRADGYVMPAVLAAVATDRGTRYPLREFAGDIEFTERLSA*
Ga0068867_1019745222	3300005459	Miscanthus Rhizosphere	LRTGGQLLVVEASSWGVLTETTERLLPGRHLDVHVVSVQGRVLVRARVARGFVSRLEADAVHYRAALAFDRPIDVRADGYFMPMTPLPAEIAPGNGYPHPVFPGDIEFTERVSA*
Ga0070707_1000100956	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MERRKAPRRVVGGEEPLSRARLRTGGPLLVLDASAWGALTESTERLLPGRHLDVHVVSVQGRVLVRSRVARAFVWRLEADSVTYRAALAFERAIDVCADGYVMPVAALPAEISPGSAYPHRPLAGDIEFTERLSA*
Ga0070707_1018782262	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MDRRRSPRRVVAADEPLSRARLRTGGQLLVLDASTWGALAESTERLLPGRYLDVHVISVQGRVLVRSRVARAFVWRLQADAVHYRAALAFDRAVDVRADGYAVPMAALP
Ga0070698_1002570933	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MERRRAPRRLVAADEALCQARLRTGAQLCVLDASSWGALAETTERLLPGRHLDVHVVSSQGRVLVRSRVARAFVARLEADAIHYRAALAFERAIDVCAAGYALPAPFLAVEIERGNPYPDRAVSTDIEFAEPLSA*
Ga0070699_1000535772	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MERRKAPRRVVGGEEPLSRARLRTGGPLLVLDASAWGALTESTERLLPGRHLDVHVVSVQGRVLVRSRVARAFVWRLEADSVTYRAALAFERAIEVCAAGYVMPAAALPAEIPPGSAYPHRPLAGDIEFTERLSA*
Ga0070699_1003806082	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MERRRALRRPVAGDEPLSGARLRTGAQLRIVDASSWGALAETAERLLPGRHLDLHVVSAQGRVLVRARVARAYVSRLEAHAIHYRTALAFDRALDVRVEGYAIPAALPGVEIEQGNRYPTRALPGDIEFAEQPSA*
Ga0073909_100775062	3300005526	Surface Soil	MERRRAHRRLVAKDEALCRAKLRTGGELRVLDASGWGALAETTERLLPGRHLDVHIVSSQGRVLVRARVARACVSRLEANVIHYRAALAFECAVDVRVEGYPMPAPVLAVQIEPGNAYPDRAGSGDIEFVERRST*
Ga0070697_1007335211	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MERRKAPRRVVGGEEPLSRARLRTGGPLLVLDASAWGALTESTERLLPGRHLDVHVVSVQGRVLVRSRVARAFVWRLEADSVTYRAALAFERAIDVCADGYVMPVAALPAEISPGSAYPHRPPAGDIEFTERLSA*
Ga0070695_1001444782	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VERRRALRRAVAGHEPLATAKLRAGAQLRVVDASSWGALAETTDRLLPGRQLDVHIVTAEGRVLVRARVARSYVSRLEASAVHYRTALAFDRALDLRAEGYAIPVALRGVEIEQGNRYPAQPSPGDIEFAEPPSG*
Ga0070696_1000092572	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MERRKAPRRVVGGEEPLSRARLRTGGPLLVLDASAWGALTESTERLLPGRHLDVHVVSVQGRVLVRSRVARAFVWRLEADSVTYRAALAFERAIDVCADGYVMPVAALPAEIPPGSAYPHRPLAGDIEFTERLSA*
Ga0070704_1003557961	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MDRRRAPRRVVGADEPLSRAKLRTGGQLLVVEASSWGVLTETTERLLPGRHLDVHVVSVQGRVLVRARVARGFVSRLEADAVHYRAALAFDRPIDVRADGYFMPMTPLPAE
Ga0070704_1005635242	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VLDASAWGALAESTERLLPGRQLDVHVVSVQGRVLVRSRVARAFVSRLEAGAVHYRAALAFDHTIDVRADGYAMPMAALPPETAPGSSYPHRAPPGDIEFAEPRSA*
Ga0066700_100073117	3300005559	Soil	RFVGAGEPLATARLRTGGQLRILDASSWGALAETTERLLPGRHLDVHIVSAQGRMLVRSRVARAFVARLEADAIHYHAALSFDRALDVRADGYVMPAVLAAVETDRGTRYPLREFAGDIEFTERLSA*
Ga0066706_114827001	3300005598	Soil	GAARRLVGDDEPLYHARLRTGAELRVVDASTWGILAETTERLLPGRHLDVHIISTDGRVLVRSRVARAFVWQLEADRVQYRAAFAFERAIGIRAAGYAMPAPFLAAEIERGSTYPDHTVSADIEFSERLSA*
Ga0068866_107220421	3300005718	Miscanthus Rhizosphere	GGQLRVLDASAWGALAESTERLLPGRQLDVHVVSVQGRVLVRSRVARAFVSRLEAGAVHYRAALAFDHTIDVRADGYAMPMAALPPETAPGSSYPHRAPPGDIEFAEPRSA*
Ga0068861_1011839861	3300005719	Switchgrass Rhizosphere	MDRRRAPRRVVGADEPLSRAKLRTGGQLLVVEASSWGVLTETTERLLPGRHLDVHVVSVQGRVLVRARVARGFVSRREADAVHYRAALAFDRPIDVRADGYFMPMTPLPAEIAPGNGYPHPAFPGDIEFTERVSA*
Ga0066651_103885922	3300006031	Soil	MERRRAHRRLVATDEALCRAKLRTGGELRVLDASSWGALAETTERLLPGRHLDVHIVSSQGRVLVRSRVARAFVSRVESSAVHYRAALAFESVVDVRVEGYPMPATVLGVHIEPGNAYPD
Ga0066665_103359552	3300006796	Soil	VTHERRGAARRLVGDEEPLYRARLRTGSELRVVDASAWGVLAETTERLLPGRHLDVHIISTDGRVLVRSRVARAFVWRLAADVIQYRAALAFERAIGIRASGYAMPAPFLAAGIEPGSAYPDRVASVDIEFAERLSA*
Ga0075433_100692693	3300006852	Populus Rhizosphere	MERRRALRRVVASDEPLSHAKLRTGGQLLVLDASSWGLLTASTERLLPGRHLDVHVVSVQGRVLVRSRVARAFVSRLEADEVEYRAALAFDRAIDVRADGYVMPAAALPPEGGEGNRYPHRPPSGDIEFAERLSA*
Ga0075425_1000120726	3300006854	Populus Rhizosphere	MERRRAPRRVVASDEPLSRAKLRTGGQLLVLDASSWGLLTASTERLLPGRHLDVHVVSVQGRVLVRSRVARAFVSRLEADEVEYRAALAFDRAIDVRADGYVMPAAALPPEGGEGNRYPHRPPSGDIEFAERLSA*
Ga0075425_1000765553	3300006854	Populus Rhizosphere	MERRKAPRRVVGGEEPLSRARLRTGGQLLVLDASAWGALTESTERLLPGRHLDVHVVSVQGRVLVRSRVARAFVWRLEADSVTYRAALAFERAIDVCADGYVMPAAALPAEISPGSAYPHRPLAGDIEFTERLSA*
Ga0075434_1003243423	3300006871	Populus Rhizosphere	MERRKAPRRVVGGEEPLSRARLRTGGQLLVLDASAWGALTESTERLLPGRHLDVHVVSVQGRVLVRSRVARAFVWRLEADSVTYRAALAFERAIDVCADGYVMPVAALPAEIQPGSAYPHRALAGDIEFTERLSA*
Ga0075434_1005496052	3300006871	Populus Rhizosphere	MERRRAPRRVVASDEPLSRAKLRTGGQLLVLDASPWGLLTASTERLLPGRHLDVHVVSVQGRVLVRSRVARAFVSRLEADEVEYRAALAFDRAIDVRADGYVMPAAALPPEGGEGNRYPHRPPSGDIEFAERLSA*
Ga0075435_1000513172	3300007076	Populus Rhizosphere	MERRRALRRVVASDEPLSRAKLRTGGQLLVLDASSWGLLTASTERLLPGRHLDVHVVSVQGRVLVRSRVARAFVSRLEADEVEYRAALAFDRAIDVRADGYVMPAAALPPEGGEGNRYPHRPPSGDIEFAERLSA*
Ga0075435_1005493722	3300007076	Populus Rhizosphere	AQLRIVDASSWGALAETSERLLPGRHLDLHVVSAQGRVLVRARVARAYVSRLEAHAIHYRTALAFDRALDVRVEGYAIPAALPGVEIDQGNRYPTHALPGDIEFAEQPSA*
Ga0099827_100517772	3300009090	Vadose Zone Soil	VLDASSWGALAETTERLLPGRHLDVHVVSSQGRVLVRSRVARAFVARLEADAIHYRAALAFERAIDVRAAGYALPAAFLAVEIERGNPYPDRAASTDIEFAERLSA*
Ga0066709_1002736123	3300009137	Grasslands Soil	MERRRAHRRLVATDEALCRAKLRTGGELRVLDASSWGALAETTERLLPGRHLDVHIVSSQGRVLVRSRVARAFVSRVEASAIHYRAALAFESGVDVRVEGYPMPATVLAVHIEPGNAYPDRIGSGDIEFAERLFT*
Ga0114129_100630243	3300009147	Populus Rhizosphere	VASDEPLSRAKLRTGGQLLVLDASSWGLLTASTERLLPGRHLDVHVVSVQGRVLVRSRVARAFVSRLEADEVEYRAALAFDRAIDVRADGYVMPAAALPPEGGEGNRYPHRPPSGDIEFAERLSA*
Ga0105243_100174194	3300009148	Miscanthus Rhizosphere	VLDASAWGALAESTERLLPGRQLDVHVVSVQGRVLVRSRVARAFVSRLEAGAVHYRAALAFDHTIDVRADGYAMPMAALPPETAPGSPYPHRAPPGDIEFAEPRSA*
Ga0105243_119573502	3300009148	Miscanthus Rhizosphere	VGADEPLSRAKLRTGGQLLVVEASSWGVLTETTERLLPGRHLDVHVVSVQGRVLVRARVARGFVSRLAADAVHYRAALAFDHPIDVRADGYFMPMTPLPAEIAPGNGYPHPVFPGDIEFTERVSA*
Ga0075423_101812173	3300009162	Populus Rhizosphere	VGGEEPLSRARLRTGGQLLVLDASAWGALTESTERLLPGRHLDVHVVSVQGRVLVRSRVARAFVWRLEADSVTYRAALAFERAIDVCADGYVMPAAALPAEISPGSAYPHRPLAGDIEFTERLSA*
Ga0105242_101355811	3300009176	Miscanthus Rhizosphere	PLSRARLRTGGQLRVLDASAWGALAESTERLLPGRQLDVHVVSVQGRVLVRSRVARAFVSRLEAGAVHYRAALAFDHTIDVRADGYAMPMAALPPETAPGSSYPHRAPPGDIEFAEPRSA
Ga0105242_127355501	3300009176	Miscanthus Rhizosphere	VGADEPLSRAKLRTGGQLLVVEASSWGVLTETTERLLPGRHLDVHVVSVQGRVLVRARVARGFVSRLEADAVHYRAALAFDRPIDVRADGYFMPMTPLPAEIAPGNGYPHPVFPGDIEFTERVSA*
Ga0126315_110194411	3300010038	Serpentine Soil	VDKRRAVRRDVNTEEALSRARLRTGGELRIIDASSWGALAETTERLLPGRHLDVHVISTEGRLLVRSRVARSFVWLLTANAVQYRAALAFERAIDVRVEGYGLPALPLAPGSAPGSNCPPRAVSTEIEFDERPSA*
Ga0134062_105036852	3300010337	Grasslands Soil	LDASSWGALAETTERMLPGRQLDVHVVSAQGRVLVRARVARAYVARLEADAVHYEAALAFDRALDVRADGYVMPAELAGVENDPGNRYPPHAVRGDIEFAERLSA*
Ga0134122_129625361	3300010400	Terrestrial Soil	TAKLRAGAQLRVVDASSWGALAETTDRLLPGRQLDVHIVTAEGRVLVRARVARSYVSRLEASAVHYRTALAFDRALDLRAEGYAIPVALRGVEIEQGNRYPAQPSPGDIEFAEPPSG*
Ga0137463_10475483	3300011444	Soil	MERRRAHRRLVARDEALCRAKLRTGGELRVLDASSWGALAETTERLLPGRHLDVHVVSSQGRILVRARVARAWVSRLEANVIHYRAALAFECAVDVRVEGYPMPAPVLAVQ
Ga0137388_108644341	3300012189	Vadose Zone Soil	VLDASSWGALAETTERLLPGRHLDVHVVSSQGRVLVRSRVARAFVARLEADAIHYRAALAFERAIDVRAAGYGLPAPFLAVEIERGNPYPDRAASTDIEFADRLSA*
Ga0137382_110716152	3300012200	Vadose Zone Soil	MERRRAHRRLVATDEALCRAKLRTGGELRVLDASSWGALAETTERLLPGRHLDVHIVSSQGRVLVRSRVARAFVSRVESSAVHYRAALAFESVVDVRVEGYPMPATVLGVHIEPGNAYPDRAGSGDIEFAERLST*
Ga0137399_100379972	3300012203	Vadose Zone Soil	LRTGGQLLVLDASAWGALAESTERLLPGRHLDVHVVSVQGRVLVRSRVARAFVSRLDADAVHYRAALAFDRAIEVRADGYAMPVAALPAEIATGSPYPHRAPPGDIEFAEQRSA*
Ga0137381_103281533	3300012207	Vadose Zone Soil	MERRRAPRRLVAADEALCRAKLRTGGELRVLDASSWGALAETTERLLPGRHLDVHVVSSHGRVLVRSRVARAFVSRLEANAVHYRAALAFESVVDVRVEGYPMPATVLAVQIEPGNAYPDRAGSGEIEFAEPLSA*
Ga0137376_103602932	3300012208	Vadose Zone Soil	MERRRAHRRLVATDEALCRAKLRTGGELRVLDASSWGALAETTERLLPGRHLDVHIVSSQGRVLVRSRVARAFVSRVEASAIHYRAALAFESVVDVRVEGYPMPATVLGVHIEPGNAYPDRTGSGDIEFAERLFT*
Ga0137377_119077501	3300012211	Vadose Zone Soil	ILDASSWGALAETTERMLPGRQLDVHVVSAQGRVLVRARVARAYVARLEADAVHYQAALAFDRALDVRADGYVMPAELAGVENDPGNRYPPHAVRGDIEFAERLSA*
Ga0137375_100434614	3300012360	Vadose Zone Soil	MERRRAHRRLVAADEALCRAKLRTGGELRVLDASSWGALAETTERLLPGRHLDVHIVSSQGRVLVRSRVARAFVSRVEASAIHFRVALAFECAVDVRMEGYPMPATVLAVQIEPGNAYPARAGSGEIEFAEPLSA*
Ga0137397_100298534	3300012685	Vadose Zone Soil	LRTGGQLLVLDASAWGALAESTERLLPGRHLDVHVVSVQGRVLVRSRVARAFVSRLDADAVHYRAALAFDRAIEVRADGYVMPVAALPAEIATGSPYPHRAPPGDIEFAEQRSA*
Ga0137410_100316444	3300012944	Vadose Zone Soil	LRTGGQLLVLDASAWGALAESTERLLPGRHLDVHVVSVQGRVLVRSRVARAFVSRLDADAVHYRAALAFDRVIEVRADGYPMPVAVLPPDVAPGSPYPHRAPPGDIEFAEQRSA*
Ga0132258_115107762	3300015371	Arabidopsis Rhizosphere	VERRRAARRPVAAGEPLARAKLRTGGQLHLLDASSSGALVRTTERLLPGRHLDVHVISAHGRVLVRARVARAFVFGLAADCVEYHAALAFDQALDVRAEGYAVPAAIPGGENGEGTRYPSTGAAGDIEFTERPSA*
Ga0132258_117980442	3300015371	Arabidopsis Rhizosphere	VGVDEPLSRAKLRTGGQLLVVEASTWGALAETTERLLPGRHLDVHVVSVQGRVLVRARVARGFVSRLEADAVHYRAGLAFDRPIDVRADGDFMPLTPLPAEIASGNGYPHPAVPGDIEFTERVPA*
Ga0184628_100821292	3300018083	Groundwater Sediment	MERRRAHRRLVARDEALCRAKLRTGGELRVLDASSWGALAETTERLLPGRHLDVHIVSSQGRVLVRARVARACVSRLEANVIHYRAALAFECAVDVRVEGYPMPAPVLAVQIEPGNAYPDRVGSGDIEFTERLST
Ga0066669_105735172	3300018482	Grasslands Soil	GELRVLDASSWGALAETTERLLPGRHLDVHIVSSQGRVLVRSRVARAFVSRVESSAVHYRAALAFESVVDVRVEGYPMPASVLGVHIEPGNAYPDRTGSGDIEFAERLFT
Ga0210380_101806021	3300021082	Groundwater Sediment	TTERLLPGRHLDVHIVSSQGRVLVRARVARACVSRLEANVIHYRAALAFECAVDVRVEGYPMPAPVLAVQIEPGNAYPDRVGSGDIEFTERLST
Ga0207684_111022021	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MERRKAPRRVVGGEEPLSRARLRTGGQLLVLDASAWGALTESTERLLPGRHLDVHVVSVQGRVLVRSRVARAFVWRLEADSVTYRAALAFERAIDVCADGYVMPVAALPAEISPGSAYPH
Ga0207646_100363686	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MERRRALRRPVAGDEPLSGARLRTGAQLRIVDASSWGALAETAERLLPGRHLDLHVVSAQGRVLVRARVARAYVSRLEAHAIHYRTALAFDRALDVRVEGYAIPAALPGVEIEQGNRYPTRALPGDIEFAEQPSA
Ga0207646_104728621	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VERRRALRRAVAGHEPLATAKLRAGAQLRVVDASSWGALAETTDRLLPGRQLDVHIVTAEGRVLVRARVARSYVSRLEASAVHYRTALAFDRALDLRAEGYAIPVAPRGVEIEQGNRYPAQPSPGDIEFAEPPSG
Ga0207686_101557142	3300025934	Miscanthus Rhizosphere	MDRRRAPRRLVAAEEPLSRARLRTGGQLRVLDASAWGALAESTERLLPGRQLDVHVVSVQGRVLVRSRVARAFVSRLEAGAVHYRAALAFDHTIDVRADGYAMPMAALPPETAPGSSYPHRAPPGDIEFAEPRSA
Ga0207709_110985002	3300025935	Miscanthus Rhizosphere	MDRRRAPRRVVGADEPLSRAKLRTGGQLLVVEASSWGVLTETTERLLPGRHLDVHVVSVQGRVLVRARVARGFVSRLEADAVHYRAALAFDRPIDVRADGYFMPMTPLPAEIAPGNGYPHPVFPGDIEFTERVSA
Ga0207669_107033202	3300025937	Miscanthus Rhizosphere	MDRRRAARRVVGADEPLSRAKLRTGGQLLVVEASSWGVLTETTERLLPGRHLDVHVVSVQGRVLVRARVARGFVSRLEADAVHYRAALAFDRPIDVRADGYFMPMTPLPAEIAPGNGYPHPVFPGDIEFTERVSA
Ga0209438_10002817	3300026285	Grasslands Soil	MDRRRAPRRLVAADEPLSRARLRTGGQLRVLDASAWGALAESTERLLPGRHLDVHVVSVQGRVLVRSRVARAFVSRLDADAVHYRAALAFDRVIEVRADGYPMPVAVLPPDVAPGSPYPHRAPPGDIEFAEQRSA
Ga0209027_10694282	3300026300	Grasslands Soil	MDRRTVPRRLVGGEEPLSRARLRTGGQLLVLDASAWGALTESTERLLPGRHLDVHVVSVQGRVLVRSQVARAFVWRLEADRVTYRAALAFDRPIEVCADGYLMPVVALPAEIRPGSAYPHRAVAGDIEFTERLSA
Ga0209686_10183223	3300026315	Soil	MERRRALRRFVGAGEPLATARLRTGGQLRILDASSWGALAETTERLLPGRHLDVHIVSAQGRMLVRSRVARAFVARLEADAIHYHAALSFDRALDVRADGYVMPAVLAAVETDRGTRYPLREFAGDIEFTERLSA
Ga0209152_100844051	3300026325	Soil	VERRRSARRPVWAGEPLARAKLRTGGQLRLLDASCSGALVQTTERLLPGRHLDVHVISAHGRVLVRVRVARAFVFHLAADCVEYHAALAFDQALDVRAEGYVVPAAIPAGDNGEGTRYPNTGATGDIEFTERPSA
Ga0209689_10991221	3300027748	Soil	ALRRFVGAGEPLATARLRTGGQLRILDASSWGALAETTERLLPGRHLDVHIVSAQGRMLVRSRVARAFVARLEADAIHYHAALSFDRALDVRADGYVMPAVLAAVETDRGTRYPLREFAGDIEFTERLSA
Ga0209811_100202862	3300027821	Surface Soil	MERRRAHRRLVAKDEALCRAKLRTGGELRVLDASGWGALAETTERLLPGRHLDVHIVSSQGRVLVRARVARACVSRLEANVIHYRAALAFECAVDVRVEGYPMPAPVLAVQIEPGNAYPDRAGSGDIEFVERRST
Ga0209515_100269076	3300027835	Groundwater	MERRRAPRRLVAADEPLCQARLRTGARLCVLDASSWGALAETTERLLPGRHLDVHVVSSQGRVLVRSRVARAFVARLEADAIHYRAALAFERVIDVRVTGYAMPAPFLAVESERGNPYPDRAVSTDIEFAERLSA
Ga0209590_101332032	3300027882	Vadose Zone Soil	MERRRAPRRLVAADEPLCQARLRTGAQLCVLDASSWGALAETTERLLPGRHLDVHVVSSQGRVLVRSRVARAFVARLEADAIHYRAALAFERAIDVRAAGYALPAAFLAVEIERGNPYPDRAASTDIEFAERLSA
Ga0307281_100680601	3300028803	Soil	ERRRAHRRLVAKDEALCRAKLRTGGELRVLDASSWGALAETTERLLPGRHLDVHIVSSQGRVLVRARVARACVSRLEANVIHYRAALAFECAVDVRVEGYPMPAPVLAVQIEPGNAYPDRVGSGDIEFTERLST
Ga0307277_100433204	3300028881	Soil	MERRRAHRRLVAKGEALCRAKLRTGGELRVLDASSWGVLAETTERLLPGRHLDVHVVASQGRVLVRARVARAYVSRLDATVIHYRAALAFECAVDVRVEGYPMPAAVLAVQIEPGNAYPDRAGSGDIEFAERLST
Ga0307497_100259651	3300031226	Soil	MERRRAHRRLVAKDEALCRAKLRTGGELRVLDASSWGALAETTERLLPGRHLDVHVVSSQGRVLVRARVARASVSRLEASVIHYRAALAFEGAIDVRVEGYPMPAPVLAVQIEPGNAYPDRAGSGDIEFVERRST
Ga0307469_100487332	3300031720	Hardwood Forest Soil	MDRRRSPRRVVAADEPLSRARLRTGGQLLVLDASTWGALAESTERLLPGRYLDVHVISVQGRVLVRSRVARAFVWRLQADAVHYRAALAFDRAVDVRADGYAVPTAALPTPREQGTPYPHRPQPGDIEFAEPASG
Ga0307468_1001676992	3300031740	Hardwood Forest Soil	MDRRRAPRRVVSVDEPLSRAKLRTGGQLLVVEASTWGALTETTQRLLPGRHLDVHVMSVQGRVLVRARVARGFVSRLEADAVHYRAALAFDRPIDVRADGYFMPMTPSPAEIAQGNGYPHPAVPGDIEFTERVSA
Ga0307468_1001961332	3300031740	Hardwood Forest Soil	MDRRRSPRRVVAADEPLSRARLRTGGQLLVLDASTWGALAESTERLLPGRYLDVHVISVQGRVLVRSRVARAFVWRLQADAVHYRAALAFDRAVDVRADGYAVPMAALPTPREQGTPYPHRAQPGDIEFAEPASG
Ga0307473_103707582	3300031820	Hardwood Forest Soil	MERRRALRRLVAAGEPLATARLRTGGQLRLLDASSWGALAETTERLLPGRQLDVHVVSAQGRMLVRSRVARAFVARLEADAIHYHAALSFDRALDVRADGYAVPAALAGVERDTGTRYPLHVIASDIEFAERVPA
Ga0307473_106886261	3300031820	Hardwood Forest Soil	MDRRRSPRRVVAADEPLSRARLRTGGQLLVLDASTWGALAESTERLLPGRHLDVHVISVQGRVLVRSRVARAFVWRLQADAVHYRAALAFDRAVDVRADGYAVPMAALPAPREQGTPYPHRRQPGDIEFAEPASG
Ga0307470_109011302	3300032174	Hardwood Forest Soil	WGALTETTERLLPGRHLDVHVVSVQGRVLVRARVARGFVSRLEADAVHYRAALAFDRPIDVRADGYFMPMTPLPAEIASGNGYPHPAVPGDIEFTDRVSA
Ga0307471_1001185583	3300032180	Hardwood Forest Soil	MERRKAPRRVVGGEEPLSRARLRTGGQLLVLDASAWGALTESTERLLPGRHLDVHVVSVQGRVLVRSRVARAFVWRLETDSVTYRAALAFERAIDVCADGYVMPVAALPAEIQPGSAYPHRPLAGDIEFTERLSA
Ga0307471_1006442411	3300032180	Hardwood Forest Soil	LLVLDASTWGALTESTERLLPGRHLDVHVISVQGRVLVRSRVARAFVSRLEADAVYYRAALAFDRAIEVHADGYVVPVAPLPAEIARGTAYPHPAIPGDIVFSEGLSA
Ga0307471_1008335142	3300032180	Hardwood Forest Soil	MDRRRSPRRVVAADEPLSRARLRTGGQLLVLDASPWGALAESTERLLPGRHLDVHVISVQGRVLVRSRVARAFVWRLQADAVHYRAALAFDRAVDVRADGYAVPMAALPASCEQGTPYPHRRQPGDIEFAEPASG
Ga0307471_1011062001	3300032180	Hardwood Forest Soil	MERRRALRRLVAAGEPLATARLRTGGQLRLLDACSWGALAETTERLLPGRQLDVHVVSAQGRMLVRSRVARAFVARLEADAIHYHAALSFDRALDVRADGYVMPAVLAGGERDAGTRYPLHGVANDIEFAERVPA
Ga0307471_1018029762	3300032180	Hardwood Forest Soil	MDRRRAPRRVVSVDEPLSRAKLRTGGQLLVVEASTWGALTETTERLLPGRHLDVHVMSVQGRVLVRARVARGFVSRLEADAVHYRAALAFDRPIDVRADGYFMPMTPSPAEIAQGNGYPHPAVPGDIEFTERVSA
Ga0307472_1023868191	3300032205	Hardwood Forest Soil	MDRRRAPRRVVSVDEPLSRAKLRTGGQLLVVEASTWGAMTETTERLLPGRHLDVHVVSVQGRVLVRARVARGFVSRLEADAVHYRAALAFDRPIDVRADGYFMPMTPLPAEIASGNGYPHPAVPGDIEFTDRVSA
Ga0326726_101047333	3300033433	Peat Soil	MERRRAPRRLVAQDEALCRAKLRTGGELRVLDASSWGALAETTERLLPGRHLDVHIVSSQGRVLVRARVARTFVSSLDANAIHYRAALAFECAVDVRVEGYPMPATVLAVQIEPGNDYPDRAGSGDIEFAKR
Ga0326723_0042960_290_688	3300034090	Peat Soil	MERRRAHRRLVAQDEALCRAKLRTGGELRVLDASSWGALAETTERLLPGRHLDVHIVSSQGRVLVRARVARTFVSSLDANAIHYRAALAFECAVDVRVEGYPMPATVLAVQIEPGNDYPDRAGSGDIEFAKR
Ga0364933_102879_90_497	3300034150	Sediment	MERRRAHRRLVARDEALCRAKLRTGGELRVLDASSWGALAETTERLLPGRHLDVHVVSSQGRILVRARVARAWVSRLEANVIHYRAALAFECAVDVRVEGYPMPAPVLAVQIEPGNAYPDRVGSGDIEFTERLST

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F086895

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences