Metagenome Family F086764

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086764
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	137 residues
Representative Sequence	MRRFAALLAVVLVAACSNEIDTSTRPDNVVGSYQLRSYGGQKLPTVVSTDQNGTAELLSGEMVIAADKSWTESRVYRYTLGGAVQQIAFGSNGSWTLTRDGAFMEFNDKVLGYQFSGTAAGGSLTLNLSDGATAIYSH
Number of Associated Samples	90
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	7.27 %
% of genes near scaffold ends (potentially truncated)	48.18 %
% of genes from short scaffolds (< 2000 bps)	89.09 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere (10.909 % of family members)
Environment Ontology (ENVO)	Unclassified (50.909 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (52.727 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 7.83% β-sheet: 46.99% Coil/Unstructured: 45.18%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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SCOP family	SCOP domain	Representative PDB	TM-score
b.61.4.1: Quinohemoprotein amine dehydrogenase A chain, domain 3	d1pbya5	1pby	0.66768
b.61.4.1: Quinohemoprotein amine dehydrogenase A chain, domain 3	d1jmxa5	1jmx	0.65522
f.4.4.2: Outer membrane adhesin/invasin OpcA	d1k24a_	1k24	0.65261
b.61.6.0: automated matches	d5ixga_	5ixg	0.65209
b.61.7.1: Extracellular hemoglobin linker subunit, receptor domain	d2gtln1	2gtl	0.64926

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF00494	SQS_PSY	30.91
PF05697	Trigger_N	5.45
PF13400	Tad	3.64
PF00893	Multi_Drug_Res	2.73
PF04240	Caroten_synth	1.82
PF13180	PDZ_2	1.82
PF05050	Methyltransf_21	1.82
PF13365	Trypsin_2	1.82
PF01593	Amino_oxidase	0.91
PF01381	HTH_3	0.91
PF05698	Trigger_C	0.91
PF13648	Lipocalin_4	0.91
PF01694	Rhomboid	0.91
PF13450	NAD_binding_8	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG1562	Phytoene/squalene synthetase	Lipid transport and metabolism [I]	30.91
COG0544	FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)	Posttranslational modification, protein turnover, chaperones [O]	6.36
COG2076	Multidrug transporter EmrE and related cation transporters	Defense mechanisms [V]	2.73
COG2324	Uncharacterized membrane protein	Function unknown [S]	1.82
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	0.91

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	95.45 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	95.45 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	84.55 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	6.36 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	84.55 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	6.36 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	84.55 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	6.36 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	84.55 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	2.73 %
unclassified Gemmatimonadaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae	1.82 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	1.82 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	84.55 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1.82 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1.82 %
unclassified Gemmatimonas	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas	1.82 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	84.55 %
Gemmatimonas sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	1.82 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1.82 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1.82 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_100701670	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	818	Open in IMG/M
3300004114\|Ga0062593_100025425	All Organisms → cellular organisms → Bacteria	3248	Open in IMG/M
3300004114\|Ga0062593_101557888	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	715	Open in IMG/M
3300004156\|Ga0062589_102433392	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	541	Open in IMG/M
3300004463\|Ga0063356_102594500	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	778	Open in IMG/M
3300004463\|Ga0063356_102618180	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	775	Open in IMG/M
3300004643\|Ga0062591_101506338	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	673	Open in IMG/M
3300005093\|Ga0062594_100410577	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1099	Open in IMG/M
3300005327\|Ga0070658_11732977	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	541	Open in IMG/M
3300005328\|Ga0070676_10581105	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	805	Open in IMG/M
3300005328\|Ga0070676_10957029	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	640	Open in IMG/M
3300005329\|Ga0070683_100633467	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1024	Open in IMG/M
3300005330\|Ga0070690_100550804	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	870	Open in IMG/M
3300005333\|Ga0070677_10006209	All Organisms → cellular organisms → Bacteria	3966	Open in IMG/M
3300005339\|Ga0070660_100758051	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300005344\|Ga0070661_100275017	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1305	Open in IMG/M
3300005345\|Ga0070692_10201435	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1166	Open in IMG/M
3300005353\|Ga0070669_101671556	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	555	Open in IMG/M
3300005354\|Ga0070675_102269765	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	500	Open in IMG/M
3300005355\|Ga0070671_100036439	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	4080	Open in IMG/M
3300005356\|Ga0070674_100278930	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1324	Open in IMG/M
3300005364\|Ga0070673_100242200	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1569	Open in IMG/M
3300005367\|Ga0070667_100236023	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1632	Open in IMG/M
3300005441\|Ga0070700_101689142	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	543	Open in IMG/M
3300005456\|Ga0070678_100390632	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1206	Open in IMG/M
3300005456\|Ga0070678_100858682	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	827	Open in IMG/M
3300005457\|Ga0070662_100491098	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1023	Open in IMG/M
3300005535\|Ga0070684_100245095	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1638	Open in IMG/M
3300005543\|Ga0070672_101169870	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	685	Open in IMG/M
3300005577\|Ga0068857_100300090	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1481	Open in IMG/M
3300005718\|Ga0068866_10667033	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	710	Open in IMG/M
3300005843\|Ga0068860_100980470	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	863	Open in IMG/M
3300006046\|Ga0066652_100002501	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	10115	Open in IMG/M
3300006844\|Ga0075428_101419268	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	728	Open in IMG/M
3300006876\|Ga0079217_10013335	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2716	Open in IMG/M
3300006876\|Ga0079217_10168719	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1082	Open in IMG/M
3300006880\|Ga0075429_101150703	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	677	Open in IMG/M
3300006918\|Ga0079216_10016102	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2695	Open in IMG/M
3300006918\|Ga0079216_10573798	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	768	Open in IMG/M
3300009094\|Ga0111539_10690627	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1188	Open in IMG/M
3300009100\|Ga0075418_10841350	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	991	Open in IMG/M
3300009553\|Ga0105249_10269493	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1696	Open in IMG/M
3300009789\|Ga0126307_10134937	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1972	Open in IMG/M
3300009840\|Ga0126313_10061607	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	2677	Open in IMG/M
3300009840\|Ga0126313_10153058	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1743	Open in IMG/M
3300010037\|Ga0126304_10122748	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1661	Open in IMG/M
3300010037\|Ga0126304_10143274	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1541	Open in IMG/M
3300010039\|Ga0126309_10105525	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1457	Open in IMG/M
3300010044\|Ga0126310_10849961	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	706	Open in IMG/M
3300010045\|Ga0126311_10630548	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	851	Open in IMG/M
3300010166\|Ga0126306_10001713	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	11880	Open in IMG/M
3300010166\|Ga0126306_10509846	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	952	Open in IMG/M
3300010166\|Ga0126306_10644051	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	847	Open in IMG/M
3300011119\|Ga0105246_11100138	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	726	Open in IMG/M
3300012909\|Ga0157290_10129298	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	784	Open in IMG/M
3300012911\|Ga0157301_10258987	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	616	Open in IMG/M
3300013100\|Ga0157373_10713746	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	735	Open in IMG/M
3300013296\|Ga0157374_12523513	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	541	Open in IMG/M
3300018476\|Ga0190274_10017403	All Organisms → cellular organisms → Bacteria	4634	Open in IMG/M
3300021445\|Ga0182009_10123058	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1208	Open in IMG/M
3300022756\|Ga0222622_10195257	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1339	Open in IMG/M
3300022756\|Ga0222622_10436370	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	927	Open in IMG/M
3300025903\|Ga0207680_10551950	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	823	Open in IMG/M
3300025907\|Ga0207645_10154405	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1499	Open in IMG/M
3300025909\|Ga0207705_10718682	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	776	Open in IMG/M
3300025909\|Ga0207705_11037286	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	633	Open in IMG/M
3300025920\|Ga0207649_10467314	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	955	Open in IMG/M
3300025920\|Ga0207649_11075388	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	634	Open in IMG/M
3300025923\|Ga0207681_10840380	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	768	Open in IMG/M
3300025925\|Ga0207650_10114919	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2088	Open in IMG/M
3300025926\|Ga0207659_10418765	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1123	Open in IMG/M
3300025930\|Ga0207701_11117726	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	652	Open in IMG/M
3300025933\|Ga0207706_10278067	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1460	Open in IMG/M
3300025938\|Ga0207704_11991598	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	500	Open in IMG/M
3300025941\|Ga0207711_10838398	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	856	Open in IMG/M
3300025944\|Ga0207661_10339492	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1353	Open in IMG/M
3300025945\|Ga0207679_10157708	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1855	Open in IMG/M
3300025972\|Ga0207668_11757756	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	560	Open in IMG/M
3300026023\|Ga0207677_11949183	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	546	Open in IMG/M
3300026075\|Ga0207708_11403504	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	613	Open in IMG/M
3300026121\|Ga0207683_10557506	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1060	Open in IMG/M
3300026121\|Ga0207683_10758091	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	900	Open in IMG/M
3300027691\|Ga0209485_1240863	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	578	Open in IMG/M
3300027886\|Ga0209486_10094370	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1578	Open in IMG/M
3300027907\|Ga0207428_10699852	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	725	Open in IMG/M
3300028380\|Ga0268265_11281113	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	732	Open in IMG/M
3300028768\|Ga0307280_10079837	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1064	Open in IMG/M
3300030496\|Ga0268240_10000499	All Organisms → cellular organisms → Bacteria	3617	Open in IMG/M
3300030496\|Ga0268240_10049327	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	898	Open in IMG/M
3300031548\|Ga0307408_100643851	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	947	Open in IMG/M
3300031824\|Ga0307413_10105102	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	1876	Open in IMG/M
3300031852\|Ga0307410_10618684	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	905	Open in IMG/M
3300031852\|Ga0307410_11007145	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	719	Open in IMG/M
3300031901\|Ga0307406_10233203	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1376	Open in IMG/M
3300031911\|Ga0307412_11324457	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	649	Open in IMG/M
3300031938\|Ga0308175_100250233	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1778	Open in IMG/M
3300031939\|Ga0308174_10152254	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1722	Open in IMG/M
3300031943\|Ga0310885_10540324	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	640	Open in IMG/M
3300031995\|Ga0307409_101573648	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	685	Open in IMG/M
3300031996\|Ga0308176_10655671	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1084	Open in IMG/M
3300031996\|Ga0308176_11390386	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	747	Open in IMG/M
3300031996\|Ga0308176_12458975	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	555	Open in IMG/M
3300032002\|Ga0307416_100796493	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1040	Open in IMG/M
3300032002\|Ga0307416_101778025	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	720	Open in IMG/M
3300032002\|Ga0307416_102491677	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	616	Open in IMG/M
3300032004\|Ga0307414_12176087	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	518	Open in IMG/M
3300032005\|Ga0307411_11015751	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	743	Open in IMG/M
3300032074\|Ga0308173_10189650	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1698	Open in IMG/M
3300033412\|Ga0310810_10000391	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	45476	Open in IMG/M
3300033475\|Ga0310811_10433866	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1416	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	54.55%
Environmental	Environmental	45.45%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	54.55%
Terrestrial	Environmental → Terrestrial	43.64%
Aquatic	Environmental → Aquatic	1.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	43.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere	43.64%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.91%
Sediment	Environmental → Aquatic → Sediment	1.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.27%
Soil	Host-Associated → Plants → Rhizosphere → Soil	23.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	20.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.27%
Loam	Environmental → Terrestrial → Soil → Loam	6.36%
Soil	Host-Associated → Plants → Rhizoplane → Soil	3.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.82%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	23.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	20.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.18%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	10.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.27%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	3.64%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.82%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	10.91%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	10.00%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	9.09%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	7.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	7.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.55%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.73%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.73%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.82%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.91%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1007016702	3300000956	Soil	VAACTNEIDTSTRPESIVGTYQLSTYGGQKLPTVVSNDQSGTMELLSGELVIGADKSWTETRVYSVTDGGFSQQISFGSSGSWTLLGEGAFMQFNDKVRGSQFTGTAAGGSVTLNLNDGATVIYSH*
Ga0062593_1000254252	3300004114	Soil	MRRSAALLAVLLFTACTNEIDTSVRPESVVGTYQLRAYAGQTPPTQISSDSLGTTELVSGELVIGADKSWVESRVYRFVQGGAAQQYIFGSNGSWVFLSSGSPDMQFNDKVLNYQFTGTAAGGTITLSLNDGTTAIYTRP*
Ga0062593_1015578881	3300004114	Soil	MRRFAALLAVVFVAACSNEIDISTRPDNIVGSYQLRSYGGQKLPTVVSVDQNGTAELLSGELVIAADKSWTESRVYRYTLGGAAKQIAFGSNGSWVLNRDGAYMEFNDKVLGYQFTGTAAGGSLTLNLSDGATAIYSH*
Ga0062589_1024333921	3300004156	Soil	MRRFAALLAVVLVAACSNEIDTSTRPDNIVGSYQLRSYGGQKLPTIVSVDQNGTAELLSGEMVIGADKSWTESRVYRYTLGGAVQQIAFGSNGSWTLTRDGAFMEFNDKVLGYQFSGTAAGGSLTLNLSDGAT
Ga0063356_1025945001	3300004463	Arabidopsis Thaliana Rhizosphere	MRRFAALLAVVLVTACSNEIDTSTRPEAIVGTYQLLTYGGQKLPTLLSSDANGSMELLSGELVIGADKSWSEARVYRVTEASGVQQIAFGSSGSWTMLGEGAFMQFNDKVLGSQFTGMAAGGSVTLNLNDGATVIYS
Ga0063356_1026181802	3300004463	Arabidopsis Thaliana Rhizosphere	MRRFAALLAVVLVAACSNEIDTSTRPEAIVGSYELRTYGGSKLPTLLSSDANGSMELLSGELVIGADKSWSESRVYRVTDAGGVQQIAFGSGGSWTLLGEGAFMQFNDKVRGSQFTGMAAGGSVTLNLNDGATVIYS
Ga0062591_1015063382	3300004643	Soil	LAVVLVAACSNEIDTSTRPDNIVGSYQLRSYGGQKLPTIVSVDQNGTAELLSGEMVIGADKSWTESRVYRYTLGGAVQQIAFGSNGSWTLTRDGAFMEFNDKVLGYQFSGTAAGGSLTLNLSDGATAIYSH*
Ga0062594_1004105771	3300005093	Soil	MRRFAALLAVVLVAACSNEIDTSTRPDNVVGSYQLRSYGGQKLPTVVSTDQNGTAELLSGEMVIAADKSWTESRVYRYTLGGAVQQIAFGSNGSWTLTRDGAFMEFNDKVLGYQFSGTAAGGSLTLNLSDGATAIYSH*
Ga0070658_117329771	3300005327	Corn Rhizosphere	IPSPPRAEAHRHPVRLMRRFAALLAVVLVAACSNEIDTSTRPDNVVGSYQLRSYGGQKLPTVVSTDQNGTAELLSGEMVIAADKSWTESRVYRYTLGGAVQQIAFGSNGSWTLTRDGAFMEFNDKVLGYQFSGTAAGGSLTLNLSDGATAIYSH*
Ga0070676_105811051	3300005328	Miscanthus Rhizosphere	CSNEIDTSTRPEAIVGTYGLLTYGGNKLPTLLSSDANGTMELLSGQLVIGADKSWSETRVYRVTEASGVQQIAFGSSGSWTMLGEGAFMQFNDKVRGYQFTGMAAGGSVTLNLNDGATVIYSHDK*
Ga0070676_109570291	3300005328	Miscanthus Rhizosphere	MRRFAALLAVVLLAACSNEIDTSTRPEAIVGTYGLLTYGGNKLPTLLSSDANGSMELLSGELVIGADKSWSETRVYRVTEASGVQQIAFGSSGSWTMLGEGAFMQFNDKVRGYQFTGMAA
Ga0070683_1006334671	3300005329	Corn Rhizosphere	PESDPAPPPAHDHPTRFMRRLAAFLAVVLVAACSNEIDTSTRPDNVVGSYQLRSYGGQKLPTVVSTDQNGTAELLSGEMVIAADKSWTESRVYRYTLGGAVQQIAFGSNGSWTLTRDGAFMEFNDKVLGYQFSGTAAGGSLTLNLSDGATAIYSH*
Ga0070690_1005508041	3300005330	Switchgrass Rhizosphere	FAALLAVVLVAACSNEIDTSTRPDNVVGSYQLRSYGGQKLPTVVSTDQNGTAELLSGEMVIAADKSWTESRVYRYTLGGAVQQIAFGSNGSWTLTRDGAFMEFNDKVLGYQFSGTAAGGSLTLNLSDGATAIYSH*
Ga0070677_100062092	3300005333	Miscanthus Rhizosphere	MRRFAALLAVVLVAACSNEIDTSTRPEAIVGTYGLLTYGGNKLPTLLSSDANGTMELLSGQLVIGADKSWSETRVYRVTEASGVQQIAFGSSGSWTMLGEGAFMQFNDKVRGYQFTGMAAGGSVTLNLNDGATVIYSHDK*
Ga0070660_1007580511	3300005339	Corn Rhizosphere	DNIVGSYQLRSYGGQKLPTVVSVDQNGTAELLSGELVIAADKSWTESRVYRYTLGGSAKQIAFGSNGSWVLNRDGAYMEFNDKVLGYQFTGTAAGGSLTLNLSDGATAIYSH*
Ga0070661_1002750172	3300005344	Corn Rhizosphere	MRRLAALLAVIFVAACSNEIETSTRPDAVIGSYELRSYGGQKLPTVVSNDQNGTAELLSGELVIGADKSWTESRVYRYTIGGVAQQITFGSNGSWVLTREGGYMEFNDKVLGYQFTGTAAGGSLTLNLNDGSTAIYSH*
Ga0070692_102014352	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLAAFLAVVLVAACSNEIDTSTRPDNVVGSYQLRSYGGQKLPTVVSTDQNGTAELLSGEMVIAADKSWTESRVYRYTLGGAVQQIAFGSNGSWTLTRDGAFMEFNDKVLGYQFSGTAAGGSLTLNLSEGATAIYSH*
Ga0070669_1016715561	3300005353	Switchgrass Rhizosphere	MRRFAALLAVVLVTACSNEIDTSTRPEAIVGTYQLLTYGGQKLPTLLSSDANGSMELLSGELVIGADKSWSEARVYRVTEASGVQQIAFGSSGSWTMLGEGAFMQFNDKVLGSQFTGMAAGGSVTLNLNDGATVIY
Ga0070675_1022697651	3300005354	Miscanthus Rhizosphere	RLMRRFAALLAVVFVAACSNEIDTSTRPDNIVGSYQLRSYGGQKLPTVVSVDQNGTAELLSGELVIAADKSWTESRVYRYTLGGSAKQIAFGSNGSWVLNRDGAYMEFNDKVLGYQFTGTAAGGSLTLNLSDGATAIYSH*
Ga0070671_1000364393	3300005355	Switchgrass Rhizosphere	MRRLAAFLAVVLVAACSNEIDTSTRPDNVVGSYQLRSYGGQKLPTVVSTDQNGTAELLSGEMVIAADKSWTESRVYRYTLGGAVQQIAFGSNGSWTLTRDGAFMEFNDKVLGYQFSGTAAGGSLTLNLSDGATAIYSH*
Ga0070674_1002789302	3300005356	Miscanthus Rhizosphere	MRRFAALLAVVFLAACSNEIDTSTRPEAIVGTYGLLTYGGSKLPTLLSSDANGSMELLSGQLVIGADKSWSETRVYRVTEASGVQQIAFGSSGSWTMLGEGAFMQFNDKVRGYQFTGMAAGGSVTLNLNDGATVIYTHDK*
Ga0070673_1002422003	3300005364	Switchgrass Rhizosphere	MRRFAALLAVVFVAACSNEIDTSTRPDNIVGSYQLRSYGGQKLPTVVSVDQNGTAELLSGELVIAADKSWTESRVYRYTLGGSAKQIAFGSNGSWVLNRDGAYMEFNDKVLGYQFTGTAAGGSLTLNLSDGATAIYSH*
Ga0070667_1002360232	3300005367	Switchgrass Rhizosphere	PGETIPSPPRAEAHRHPVRLMRRFAALLAVVLVAACSNEIDTSTRPDNVVGSYQLRSYGGQKLPTVVSTDQNGTAELLSGEMVIAADKSWTESRVYRYTLGGAVQQIAFGSNGSWTLTRDGAFMEFNDKVLGYQFSGTAAGGSLTLNLSDGATAIYSH*
Ga0070700_1016891421	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	NEIDTSTRPEAIVGTYGLLTYGGNKLPTLLSSDANGTMELLSGQLVIGADKSWSETRVYRVTEASGVQQIAFGSSGSWTMLGEGAFMQFNDKVRGYQFTGMAAGGSVTLNLNDGATVIYSHDK*
Ga0070678_1003906321	3300005456	Miscanthus Rhizosphere	MRRLAALLAVVLVAACTNEIDTSTRPEAVIGSYQLRSYGGQKLPTVVTTDGNGTAELISGELVIGADRSWSEQRVFRYTINGVAQQISFGSNGSWTLTREGGFMEFNDKVLGYQFTGTAAGGSLTLNLSDGATAIYSH*
Ga0070678_1008586822	3300005456	Miscanthus Rhizosphere	MRRFAALLAVVFLAACSNEIDTSTRPEAIVGTYGLLTYGGNKLPTLLSSDANGTMELLSGQLVIGADKSWSETRVYRVTEASGVQQIAFGSSGSWTMLGEGAFMQFNDKVRGYQFTGMAAGGSVTLNLNDGATVIYSHDK*
Ga0070662_1004910982	3300005457	Corn Rhizosphere	MRRFAALLAVVLLAACSNEIDTSTRPEAIVGTYGLLTYGGNKLPTLLSSDANGSMELLSGQLVIGADKSWSETRVYRVTEASGVQQIAFGSSGSWTMLGEGAFMQFNDKVRGYQFTGMAAGGSVTLNLNDGATVIYTHDK*
Ga0070684_1002450953	3300005535	Corn Rhizosphere	MRRFAALLAVVFVAACSNEIDISTRPDNIVGSYQLRSYGGQKLPTVVSVDQNGTAELLSGELVIAADKSWTESRVYRYTLGGSAKQIAFGSNGSWVLNRDGAYMEFNDKVLGYQFTGTAAGGSLTLNLSDGATAIYSH*
Ga0070672_1011698702	3300005543	Miscanthus Rhizosphere	TRPEAIVGTYGLLTYGGNKLPTLLSSDANGSMELLSGELVIGADKSWSETRVYRVTEASGVQQIAFGSSGSWTMLGEGAFMQFNDKVRGYQFTGMAAGGSVTLNLNDGATVIYTHDK*
Ga0068857_1003000901	3300005577	Corn Rhizosphere	SSALARVQYPPESDPAPPPAHDHPTRFMRRLAAFLAVVLVAACSNEIDTSTRPDNVVGSYQLRSYGGQKLPTVVSTDQNGTAELLSGEMVIAADKSWTESRVYRYTLGGAVQQIAFGSNGSWTLTRDGAFMEFNDKVLGYQFSGTAAGGSLTLNLSDGATAIYSH*
Ga0068866_106670331	3300005718	Miscanthus Rhizosphere	MRRFAALLAVVLVAACSNEIDTSTRPENIVGSYQLRSYGGQKLPTVVTVDQNGTAELLSGEMVIGADKSWTESRVYRYTLGGAVQQIAFGSNGSWTLTRDGAFMEFNDKVLGYQFSGTAAGGSLTLNLSDGATAIYSH*
Ga0068860_1009804702	3300005843	Switchgrass Rhizosphere	PPESDPAPPPAHDHPTRLMRRLAAFLAVVLVAACSNEIDTSTRPDNVVGSYQLRSYGGQKLPTVVSTDQNGTAELLSGEMVIAADKSWTESRVYRYTLGGAVQQIAFGSNGSWTLTRDGAFMEFNDKVLGYQFSGTAAGGSLTLNLSDGATAIYSH*
Ga0066652_1000025015	3300006046	Soil	MRRFAALLAVVLVAACTNEIDTSTRASSVVGSYQLRSYGGRTLPVLVTSDENGTTEVLSGKLVLASDKSWTESRVYRYTYTQGGTVQQIEFSSSGSWTFLRDGADMQFNDKVLGYQFTGTAAGGSVTLNLNDGATVIYSH*
Ga0075428_1014192681	3300006844	Populus Rhizosphere	MRRFAALLAVVLVAACSSEIDTSTRPEEIVGTYQLRRYGGQALPALVSTDQPGAMELLSGELVIDADKSWTESRVYRVTEGGVSQQFDFGSSGSWTLLGEGALMQFNDQERGYQFTGTAAGGSVTLNLNDGATVIYSH*
Ga0079217_100133353	3300006876	Agricultural Soil	MRRFAAFLVAVLLTACTSALDTRTRAQSGVGTYQLRSYGGRPLPTQTSADPELTTELLGGELVIGSDKSWTETRTYRYTQSGGVQQLSFGTSGSWVYLREGADMQFNDKVLGYQFTGTAAGGSVTLNLNDGYTLIYSR*
Ga0079217_101687192	3300006876	Agricultural Soil	MRRFAALLAVVLVAACTNEIDTSTRPESIVGTYQLSTYGGQKLPTVVSSDQSGTMELLSGELVIDADKSWTEARVYRVTDGGSSQQIVFGSSGSWTLLGEGAFMQFNDKVRGYQFTGTAAGGSVTLNLNDGATVIYAQ*
Ga0075429_1011507032	3300006880	Populus Rhizosphere	PIRLMRRFAALLAVVLVAACSNEIDTSTRPDNVVGSYQLRSYGGQKLPTVVSTDQNGTAELLSGVMVIAADKSWTESRVYRYTLGGAVQQIAFGSNGSWTLTRDGAFMEFNDKVLGYQFSGTAAGGSLTLNLSDGATAIYSH*
Ga0079216_100161022	3300006918	Agricultural Soil	MRRFAAFLVAVLLTACTSELDTSTRAQSVVGTYQLRSYGGRPLPTQTSADPELTTELLGGELVIGSDKSWTETRTYRYTQSGGVQQLSFGTSGSWVYLREGADMQFNDKVLGYQFTGTAAGGSVTLNLNDGYTLIYSR*
Ga0079216_105737981	3300006918	Agricultural Soil	MRRFAALLAVVLVAACTNEIDTSIRPESIVGTYQLSTYGGQKLPTVVSSDQSGTMELLSGELVIDADKSWTEARVYRVTDGGSSQQIVFGSSGSWTLLGEGAFMQFNDKVRGYQFTGTAAGGSVTLNLNDGATVIYAQ*
Ga0111539_106906272	3300009094	Populus Rhizosphere	MRRFAALLAVVLVAACSNEIDTSTRPDNVVGSYQLRSYGGQKLPTVVSTDQNGTAELLSGEMVIAADKSWTESRVYRYTLGGSVQQIAFGSNGSWTLTRDGAFMEFNDKVLGYQFSGTAAGGSLTLNLSDGATAIYSH*
Ga0075418_108413502	3300009100	Populus Rhizosphere	AALLAVVLVAACSSEIDTSTRPEEIVGTYQLRRYGGQALPALVSTDQPGAMELLSGELVIDADKSWTESRVYRVTEGGVSQQFDFGSSGSWTLLGEGALMQFNDQERGYQFTGTAAGGSVTLNLNDGATVIYSH*
Ga0105249_102694933	3300009553	Switchgrass Rhizosphere	MRRFAALLAVVLVAACSNEIDTSTRPDNVVGSYQLRSYGGQKLPTVVSTDQNGTAELLSGEMVIAADKSWTESRVYRYTLGGAVQQIAFGSNGSWTLTRDGAFMEFNDKVLGYQFSGTAAGGSLTLSLSDGATAIYSH*
Ga0126307_101349372	3300009789	Serpentine Soil	MRRLAALLAAVILTACTNEIDQSTRPTAVVGSYQLKAYGGRSLPVQVTSDVNGTMEILSGELVIGSDKSWTESRLYRYTESGVVQQVSFGSAGSWVFLRDGADMQFNDKVLGYQFTGTAAGGSVTLNLNDGNTVIYSR*
Ga0126313_100616073	3300009840	Serpentine Soil	MRRLAALLAAVILTACSTEIDQSTRPASVVGSYQLKAYGGRALPVQVTSDVNGTMEIRSGELVIGSDKSWTETRVYRYTESGVVQEVSFGSAGSWVFLREGADMQFNDKVLGYQFTGTAAGGSVTLNLNDGNTVIYSR*
Ga0126313_101530581	3300009840	Serpentine Soil	MRRFAALLAVVLVAACTNEIDTSTRPEAVIGSYQLRSYGGQKLPVLVSTDQNGTAELLSGELVIAADKSWTESRVYRYTLGGVAQNIEFGSNGSWVLTREGAFMEFNDKALGYQFTGTAAGGSLTLYLSDGATAIYSH*
Ga0126304_101227482	3300010037	Serpentine Soil	MRRFAALLAVVLVAACSNEIDTSTRPEAIVGTYGLLTYGGNKLPTLLSSDANGTMELLSGELVIGADKSWSETRVYRVTEASGVQQIAFGSSGSWTMLGEGAFMQFNDKVRGYQFTGMAAGGSVTLNLNDGATVIYSHDK*
Ga0126304_101432742	3300010037	Serpentine Soil	MRRFAALLAVIFVAACTNEIDTSTRPEAVVGSYQLRSYGGRTLPTLVSTDANGTQELLSGELVIGADKSWTETRVFRYTEGGVAQQIAFGSNGSWAFLRDFAYMQFNDKMLGYQFTGTAAGGSVTLNLNDGNTAIYSR*
Ga0126309_101055251	3300010039	Serpentine Soil	MRRLAALLAAVILTAACTNEIDQSTRPTSVVGSYQLKAYGGRTPPVQITTENAGTMEILSGELVIGADKSWSESRVYRYTENGAVQQLSFGSAGSWTFLRDSASMQFNDKQLKYQFSGLAAGGTVTLSLNDGYTAVYSH*
Ga0126310_108499612	3300010044	Serpentine Soil	LMRRVAALLAVVILTACTNEIDQSTRPESVVGSYQLRAYGGQKPPVEVSSENDGTMVLLGGELVIGADKSFTETRTYRYTENGAVLQVSFGSAGSWVFLGEGANMQFNDKVLGYQFTGTAAGGSVTLSLSDGNTVIYSH*
Ga0126311_106305482	3300010045	Serpentine Soil	MRRLAALLAAVILTACSTEIDQSTRPASVVGSYQLKAYGGRTLPVEVSTDVNGTMEIRSGELVIGSDKSWTETRVYRYTESGVVQEVSFGSAGSWVFLREGADMQFNDKVLGYQFTGTAAGGSVTLNLNDGNTVIYSR*
Ga0126306_100017132	3300010166	Serpentine Soil	MRRLAALLAAVILTACSTEIDQSTRPASVVGSYQLKAYGGRGLPVQVSSDVNGTMEILSGELVIGSDKSWTESRVYRYTESGVVQQVSFGSAGSWVFLREGADMQFNDKVLGYQFTGTAAGGSVTLNLNDGNTVIYSR*
Ga0126306_105098462	3300010166	Serpentine Soil	STEIDQSTRPASVVGSYELKAYGGRGLPVQVSSDVNGTMEILSGELVIGSDRSWAESRVYRYTESGVVQQVSFGSAGSWVFLRDGADMQFNDKVLGYQFTGTAAGGSVTLNLNDGNTVIYSR*
Ga0126306_106440512	3300010166	Serpentine Soil	MRRLAALLAAVILTACTNEIDQSTRPTAVVGSYQLKAYGGRSLPVQVTSDANGTMEILSGELVIGSDKSWTESRLYRYTESGVVQQVSFGSAGSWVFLRDGADMQFNDKVLGYQFTGTAAGGSVTLNLNDGNTVIYSR*
Ga0105246_111001381	3300011119	Miscanthus Rhizosphere	RAEAHRHPIRLMRRFAALLAVVLVAACSNEIDTSTRPDNVVGSYQLRSYGGQKLPTVVSTDQNGTAELLSGEMVIAADKSWTESRVYRYTLGGAVQQIAFGSNGSWTLTRDGAFMEFNDKVLGYQFSGTAAGGSLTLNLSDGATAIYSH*
Ga0157290_101292981	3300012909	Soil	MRRFAALLAVVLVAACSNEIDTSTRPEAIVGTYQLLTYGGQKLPTLLSSDANGSMELLSGELVIGADKSWSESRVYRVTDAGGVQQIAFGSGGSWTLLGEGAFMQFNDKVRGSQFTGMAAGGSVTLNLNDGATVIYSH*
Ga0157301_102589871	3300012911	Soil	MRRFAALLAVVFLAACSNEIDTSTRPEAIVGTYGLLTYGGNKLPTLLSSDANGTMELLSGQLVIGADKSWSETRVYRVTEASGVQQIAFGSSGSWTMLGEGAFMQFNDKVRGYQFTGMAAGGSVTLNLNDGA
Ga0157373_107137461	3300013100	Corn Rhizosphere	MRRLAALLAVLLVAACSNEIDTSTRPDAVIGSYQLRTYGGQKLPTVVSVDQNGTAELLSGELVIGADRSWTESRVYRYTLGGVAQQITFGSNGSWALTRDGAFMEFNDKVLGYQFTGTAAGGSLTLNLNDGATAIYSH*
Ga0157374_125235131	3300013296	Miscanthus Rhizosphere	STRPDNIVGSYQLRSYGGQKLPTVVSVDQNGTAELLSGELVIAADKSWTESRVYRYTLGGSAKQIAFGSNGSWVLNRDGAYMEFNDKVLGYQFTGTAAGGSLTLNLSDGATAIYSH*
Ga0190274_100174034	3300018476	Soil	MRRFAALLAVLLVAACTNEIETSTRPEAIVGTYNLRSYAGQKLPTVISSADVTGTMELRSGELVIDANKSWTESRVYRVTDGGTSQDIVFGSSGSWTLLGEGAFMQFNDKVRGSQFTGTAAGGSVTLNLNDGATVIYSH
Ga0182009_101230582	3300021445	Soil	MRRIAALLAVILVAACSNEIDTSTRPDAVIGSYQLRSYGGQKLPTVVSNDQNGTAELLSGELVIGADRSWTESRVYRYTLGGVAQQITFGSNGSWALTREGGFMEFNDKVLGYQFTGTAAGGSLTLNLNDGSTAIYSH
Ga0222622_101952572	3300022756	Groundwater Sediment	MRRFAALLAVVLVAACSNEIDTSTRPEAVIGTYGLLTYGGQKLPAVISTDASGTMELRSGELVIGANKSWTESRVYRVTDGGVSQDIVFGSSGSWTMLGEGAFMQFNDKVRGSQFTGTAAGGSVTLNLNDGATVIYTH
Ga0222622_104363701	3300022756	Groundwater Sediment	LPRAEAHRPPIRLMRRFAALLAVVFVAACSNEIDISTRPDNIVGSYQLRSYGGQKLPTVVSVDQNGTAELLSGELVIAADKSWTESRVYRYTLGGAAKQIAFGSNGSWVLNRDGAYMEFNDKVLGYQFTGTAAGGSLTLNLSDGATAIYSH
Ga0207680_105519502	3300025903	Switchgrass Rhizosphere	MRRFAALLAVVLVAACSNEIDTSTRPDNVVGSYQLRSYGGQKLPTVVSTDQNGTAELLSGEMVIAADKSWTESRVYRYTLGGAVQQIAFGSNGSWTLTRDGAFMEFNDKVLGYQFSGTAAGGSLTLNLSDGATAIYSH
Ga0207645_101544052	3300025907	Miscanthus Rhizosphere	MRRFAALLAVVLLAACSNEIDTSTRPEAIVGTYGLLTYGGNKLPTLLSSDANGSMELLSGELVIGADKSWSETRVYRVTEASGVQQIAFGSSGSWTMLGEGAFMQFNDKVRGYQFTGMAAGGSVTLNLNDGATVIYTHDK
Ga0207705_107186821	3300025909	Corn Rhizosphere	RPDNVVGSYQLRSYGGQKLPTVVSTDQNGTAELLSGEMVIAADKSWTESRVYRYTLGGAVQQIAFGSNGSWTLTRDGAFMEFNDKVLGYQFSGTAAGGSLTLNLSDGATAIYSH
Ga0207705_110372861	3300025909	Corn Rhizosphere	MRRFAALLAVVFVAACSNEIDTSTRPDNIVGSYQLRSYGGQKLPTVVSVDQNGTAELLSGELVIAADKSWTESRVYRYTLGGSAKQIAFGSNGSWVLNRDGAYMEFNDKVLGYQFTGTAAGGSLTLNLSDGATAIYSH
Ga0207649_104673141	3300025920	Corn Rhizosphere	RHMRRLAALLAVIFVAACSNEIETSTRPDAVIGSYELRSYGGQKLPTVVSNDQNGTAELLSGELVIGADKSWTESRVYRYTIGGVAQQITFGSNGSWVLTREGGYMEFNDKVLGYQFTGTAAGGSLTLNLNDGSTAIYSH
Ga0207649_110753881	3300025920	Corn Rhizosphere	TGPVRPGETIPSPPRAEAHRHPIRLMRRFAALLAVVLVAACSNEIDTSTRPDNVVGSYQLRSYGGQKLPTVVSTDQNGTAELLSGEMVIAADKSWTESRVYRYTLGGAVQQIAFGSNGSWTLTRDGAFMEFNDKVLGYQFSGTAAGGSLTLNLSDGATAIYSH
Ga0207681_108403801	3300025923	Switchgrass Rhizosphere	MRRFAALLAVVLVTACSNEIDTSTRPEAIVGTYQLLTYGGQKLPTLLSSDANGSMELLSGELVIGADKSWSEARVYRVTEASGVQQIAFGSSGSWTMLGEGAFMQFNDKVLGSQFTGMAAGGSVTLNLNDGATVIYSH
Ga0207650_101149192	3300025925	Switchgrass Rhizosphere	MRRLAAFLAVVLVAACSNEIDTSTRPDNVVGSYQLRSYGGQKLPTVVSTDQNGTAELLSGEMVIAADKSWTESRVYRYTLGGAVQQIAFGSNGSWTLTRDGAFMEFNDKVLGYQFSGTAAGGSLTLNLSDGATAIYSH
Ga0207659_104187651	3300025926	Miscanthus Rhizosphere	PARPASTDPPTPLMRRFAALLAVVLVAACSNEIDTSTRPEAIVGTYGLLTYGGNKLPTLLSSDANGTMELLSGQLVIGADKSWSETRVYRVTEASGVQQIAFGSSGSWTMLGEGAFMQFNDKVRGYQFTGMAAGGSVTLNLNDGATVIYSHDK
Ga0207701_111177261	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	SNEIDTSTRPEAIVGTYGLLTYGGSKLPTLLSSDANGSMELLSGELVIGADKSWSETRVYRVTEASGVQQIAFGSSGSWTMLGEGAFMQFNDKVRGYQFTGMAAGGSVTLNLNDGATVIYTHDK
Ga0207706_102780672	3300025933	Corn Rhizosphere	MRRFAALLAVVLLAACSNEIDTSTRPEAIVGTYGLLTYGGNKLPTLLSSDANGSMELLSGQLVIGADKSWSETRVYRVTEASGVQQIAFGSSGSWTMLGEGAFMQFNDKVRGYQFTGMAAGGSVTLNLNDGATVIYTHDK
Ga0207704_119915981	3300025938	Miscanthus Rhizosphere	MRRFAALLAVVLVAACSNEIDTSTRPDNVVGSYQLRSYGGQKLPTVVSTDQNGTAELLSGEMVIAADKSWTESRVYRYTLGGAVQQIAFGSNGSWTLTRDGAFMEFNDKVLGYQFSGTAAGGSLTLNLSD
Ga0207711_108383982	3300025941	Switchgrass Rhizosphere	IRLMRRFAALLAVVLVAACSNEIDTSTRPDNVVGSYQLRSYGGQKLPTVVSTDQNGTAELLSGEMVIAADKSWTESRVYRYTLGGAVQQIAFGSNGSWTLTRDGAFMEFNDKVLGYQFSGTAAGGSLTLNLSDGATAIYSH
Ga0207661_103394922	3300025944	Corn Rhizosphere	MRRFAALLAVVFVAACSNEIDISTRPDNIVGSYQLRSYGGQKLPTVVSVDQNGTAELLSGELVIAADKSWTESRVYRYTLGGAAKQIAFGSNGSWVLNRDGAYMEFNDKVLGYQFTGTAAGGSLTLNLSDGATAIYSH
Ga0207679_101577082	3300025945	Corn Rhizosphere	MRRLAALLAVIFVAACSNEIETSTRPDAVIGSYELRSYGGQKLPTVVSNDQNGTAELLSGELVIGADKSWTESRVYRYTIGGVAQQITFGSNGSWVLTREGGYMEFNDKVLGYQFTGTAAGGSLTLNLNDGSTAIYSH
Ga0207668_117577561	3300025972	Switchgrass Rhizosphere	RPENVVGSYQLRSYGGQKLPTVVSTDQNGTAELLSGEMVIAADKSWTESRVYRYTLGGAVQQIAFGSNGSWTLTRDGAFMEFNDKVLGYQFSGTAAGGSLTLNLSDGATAIYSH
Ga0207677_119491831	3300026023	Miscanthus Rhizosphere	TSTRPEAVIGSYQLRSYGGQKLPTVVTTDGNGTAELISGELVIGAVRSWSEQRVFRYTINGVAQQISFGSNGSWTLTREGGFMEFNDKVLGYQFTGTAAGGSLTLNLSDGATAIYSH
Ga0207708_114035041	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	CSNEIDTSTRPEAIVGTYGLLTYGGNKLPTLLSSDANGTMELLSGQLVIGADKSWSETRVYRVTEASGVQQIAFGSSGSWTMLGEGAFMQFNDKVRGYQFTGMAAGGSVTLNLNDGATVIYSHDK
Ga0207683_105575062	3300026121	Miscanthus Rhizosphere	MRRLAALLAVVLVAACTNEIDTSTRPEAVIGSYQLRSYGGQKLPTVVTTDGNGTAELISGELVIGADRSWSEQRVFRYTINGVAQQISFGSNGSWTLTREGGFMEFNDKVLGYQFTGTAAGGSLTLNLSDGATAIYSH
Ga0207683_107580911	3300026121	Miscanthus Rhizosphere	MRRFAALLAVVFLAACSNEIDTSTRPEAIVGTYGLLTYGGSKLPTLLSSDANGSMELLSGQLVIGADKSWSETRVYRVTEASGVQQIAFGSSGSWTMLGEGAFMQFNDKVRGYQFTGMAAGGSVTLNLNDGATVIYSHDK
Ga0209485_12408631	3300027691	Agricultural Soil	MRRFAALLAVVLVAACTNEIDTSIRPESIVGTYQLSTYGGQKLPTVVSSDQSGTMELLSGELVIDADKSWTEARVYRVTDGGSSQQIVFGSSGSWTLLGEGAFMQFNDKVRGYQFTGTAAGGSVTLNL
Ga0209486_100943702	3300027886	Agricultural Soil	MRRFAAFLVAVLLTACTSELDTSTRAQSVVGTYQLRSYGGRPLPTQTSADPELTTELLGGELVIGSDKSWTETRTYRYTQSGGVQQLSFGTSGSWVYLREGADMQFNDKVLGYQFTGTAAGGSVTLNLNDGYTLIYSR
Ga0207428_106998522	3300027907	Populus Rhizosphere	MRRFAALLAVVLVAACSNEIDTSTRPDNVVGSYQLRSYGGQKLPTVVSTDQNGTAELLSGEMVIAADKSWTESRVYRYTLGGSVQQIAFGSNGSWTLTRDGAFMEFNDKVLGYQFSGTAAGGSLTLNLS
Ga0268265_112811132	3300028380	Switchgrass Rhizosphere	LMRRFAALLAVVLVAACSNEIDTSTRPDNVVGSYQLRSYGGQKLPTVVSTDQNGTAELLSGEMVIAADKSWTESRVYRYTLGGAVQQIAFGSNGSWTLTRDGAFMEFNDKVLGYQFSGTAAGGSLTLNLSDGATAIYSH
Ga0307280_100798373	3300028768	Soil	MRRFAALLAVVFVSACTNEIDTSTRPDAVVGSYSLRSYGGQKLPTVVMTDVNGTQELVSGELLIGADKSWTETRVYRYTQGGVAQQISFGSNGSWALVSDYGYMQFNDKVLGYQFTGTAAGGSVTLSLNDGNTAVYSH
Ga0268240_100004993	3300030496	Soil	MRRLAALLAVIFVAACSNEIDTSTRPDAVIGSYQLRSYGGQKLPTVVSVDQNGTAELLSGELVIGADKSWTEARVYRYTLNGVAQQITFGSNGSWALTRDGAFMEFNDKVLGYQFTGTAAGGSLTLNLSDGSTAIYSH
Ga0268240_100493272	3300030496	Soil	MRRLAALLAVILVAACSNEIDTSTRPEAVIGSYQLRSYGGQKLPTVVSVDQNGTAEILSGELVIGADKSWTESRVYRYTLGGVAQQITFGSNGSWALTRDGAFMEFNDKVLGYQFTGTAAGGSLTLNLNDGSTAIYSH
Ga0307408_1006438512	3300031548	Rhizosphere	MRRLTALLVAVLLTACVPELDTSTRAESVIGTYQLRSYGGRPLPTQTSSDEEGTTELLGGELKIASDKSWTETRTYRYTQTGTVQQYTFGSAGSWVFLREGADMQFNDKVLGYQFTGTAAGGSVTLSLNDGYTLVYSR
Ga0307413_101051021	3300031824	Rhizosphere	CVPELDTSTRAESVIGTYQLRSYGGRPLPTQTSSDEEGTTELLGGELKIASDKSWTETRTYRYTQTGTVQQYTFGSAGSWVFLREGADMQFNDKVLGYQFTGTAAGGSVTLSLNDGYTLVYSR
Ga0307410_106186841	3300031852	Rhizosphere	LARCLPPPSISMRRLTALLVAVLLTACVPELDTSTRAESVIGTYQLRSYGGRPLPTQTSSDDEGTTELLGGELKIASDKSWTETRTYRYTQTGSVQQYTFGSAGSWVFLREGADMQFNDKVLGYQFTGTAAGGSVTLSLNDGYTLIYSR
Ga0307410_110071452	3300031852	Rhizosphere	ARVQHELSSAVVALAPAAEGPLDTLRLRMRRLAALLAVVLLTACTNEIDTSTRPTSIVGTYHLRAYGGRTLPTQTATDEMGTTELLSGELVIGSDKSWTETRLYRYTQGATSQQLTFGSAGSWAFLGEGADLQFNDKVLNYQFTGTAAGGSVTLNLNDGATVIYTH
Ga0307406_102332031	3300031901	Rhizosphere	IGTYHLRAYGGRTLPTQTATDEMGTTELLSGELVIGSDKSWTETRLYRYTQGATSQQLTFGSAGSWAFLGEGADLQFNDKVLNYQFTGTAAGGSVTLNLNDGNLVIYSR
Ga0307412_113244571	3300031911	Rhizosphere	SIVGTYHLRAYGGRTLPTQTATDEMGTTELLSGELVIGSDKSWTETRLYRYTQGATSQQLTFGSAGSWAFLGEGADLQFNDKVLNYQFTGTAAGGSVTLNLNDGNLVIYSR
Ga0308175_1002502332	3300031938	Soil	MRRLAALLAAVLVAACSNEIETSTRPDAVIGSYELRSYGGQKLPTVVSNDQNGTAELLSGELVIGADKSWTESRVYRYTIGGDAQDITFGSNGSWVLTREGGYMEFNDKVLGYQFTGTAAGGSLTLNLNDGSTAIYSH
Ga0308174_101522542	3300031939	Soil	MRRFAALLAVVLVAACTNEIDTSTRPDAVVGSYSLRSYGGHPLPTVVMTDENGVQELVSGELVIGADKSWTEARVYRYTQGGVAQQISFGSSGSWALLRDYGYMQFNDKVLGYQFTGTAAGGSVTLSLNDGNTAIYSH
Ga0310885_105403241	3300031943	Soil	SNEIDTSTRPDNVVGSYQLRSYGGQKLPTVVSTDQNGTAELLSGEMVIAADKSWTESRVYRYTLGGAVQQIAFGSNGSWTLTRDGAFMEFNDKVLGYQFSGTAAGGSLTLNLSDGATAIYSH
Ga0307409_1015736481	3300031995	Rhizosphere	AASPTDSPTPLMRRFAALLAVVLVAACSNEIDTSTRPEAIVGTYGLLTYGGQKLPAVISTDASGTMELRSGELVIGANKSWTESRVYRVTDGGVAQDIVFGSSGSWTMLGEGAFMQFNDKVRGYQFTGTAAGGSVTLNLNDGATVIYTH
Ga0308176_106556711	3300031996	Soil	MRRFAALLAVVFVAACTNEIDTSTRPEAVVGSYSLRSYGGHPLPTVVMTDENGVQELVSGELVIGADKSWTEARVYRYTQGGVSQQISFGSSGSWALLRDFGYMQFNDKVLGYQFTGTAAGGSVTLSLNDGNTAIYSH
Ga0308176_113903861	3300031996	Soil	MRRLGALLAVLFVAACSNEIDTSTRPDAVIGSYSLRSYGGQKLPTVVSVDQNGTAELLSGELVIGADRSWTESRVYRYTLGGTAQQITFGSNGSWVLTREGGFMEFNDKVLGYKFTGTAAGGSLTLNLNDGSTAIYSQ
Ga0308176_124589751	3300031996	Soil	MRRFAALLAVVLVAACTNEIDTSTRPEAIIGSYQLRSYGGHPLPTVVMTDESGVQELVSGELVIGADKSWTEARVYRYTQGGVAQQISFGSGGSWALLRDYGYMQFNDKVLGYQFTGTAAGGSVTLSLNDGN
Ga0307416_1007964931	3300032002	Rhizosphere	MRRLTALLVAVLLTACVPELDTSTRAESVIGTYQLRSYGGRPLPTQTSSDDEGTTELLGGELKIASDKSWTETRTYRYTQTGSVQQYTFGSAGSWVFLREGADMQFNDKVLGYQFTGTAAGGSV
Ga0307416_1017780251	3300032002	Rhizosphere	ISMRRLTALLVAVLLTACVPELDTSTRAESVIGTYQLRSYGGRPLPTQTSSDEEGTTELLGGELKIASDKSWTETRTYRYTQTGTVQQYTFGSAGSWVFLREGADMQFNDKVLGYQFTGTAAGGSVTLSLNDGYTLVYSR
Ga0307416_1024916771	3300032002	Rhizosphere	LDTLRLRMRRLAALLAVVLLTACTNEIDTSTRPTSIVGTYHLRAYGGRTLPTQTATDEMGTTELLSGELVIGSDKSWTETRLYRYTQGATSQQLTFGSAGSWAFLGEGADLQFNDKVLNYQFTGTAAGGSVTLNLNDGNLVIYSR
Ga0307414_121760871	3300032004	Rhizosphere	MRRLTALLVAVLLTACVPELDTSTRAESVIGTYQLRSYGGRPLPTQTSSDEEGTTELLGGELKIASDKSWTETRTYRYTQTGTVQQYTFGSAGSWVFLREGADMQFNDKVLGYQFTGT
Ga0307411_110157512	3300032005	Rhizosphere	AGAARDRLTSAPATAEGQEGPRTGPLARCLPPASISMRRLTALLVAVLLTACVPELDTSTRAESVIGTYQLRSYGGRPLPTQTSSDEEGTTELLGGELKIASDKSWTETRTYRYTQTGTVQQYTFGSAGSWVFLREGADMQFNDKVLGYQFTGTAAGGSVTLSLNDGYTLVYSR
Ga0308173_101896502	3300032074	Soil	MRRFAALLAVVLVSACTNEIDTSTRPNAVVGSYSLRSYGGQKLPTVVMTDANGTQELVSGELVIGADKSWTESRVYRYTQAGVAQQISFGSNGSWALVSDYGYMQFNDKVLGYQFTGTAAGGSVTLSLNDGNTAVYSH
Ga0310810_100003913	3300033412	Soil	MRRLAALLAVVFLTACANEMDQSTRPSSVVGTYELRAYGGRSLPALVSQDSVSTTEVLSGELVIAADQTWAETRVYRYTDAGGSQTVSLGSSGSWVFVRDDASMQFNDKVYDYQFTGTAAGGSVTLHLNDGNTVIYAQ
Ga0310811_104338661	3300033475	Soil	ANEMDQSTRPSSVVGTYELRAYGGRSLPALVSQDSVSTTEVLSGELVIAADQTWAETRVYRYTDAGGSQTVSLGSSGSWVFVRDDASMQFNDKVYDYQFTGTAAGGSVTLHLNDGNTVIYAQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F086764

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences