Metagenome / Metatranscriptome Family F086751

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086751
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	74 residues
Representative Sequence	MTNDSKKRKGTFGRVIDAIVAWENAMDYTPYDYVLDRVCNLEREVLLLRDELRALPALNNAGDRAKPASSSPAVAR
Number of Associated Samples	96
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	90.00 %
% of genes near scaffold ends (potentially truncated)	18.18 %
% of genes from short scaffolds (< 2000 bps)	92.73 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.455 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (24.546 % of family members)
Environment Ontology (ENVO)	Unclassified (30.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.15% β-sheet: 0.00% Coil/Unstructured: 53.85%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF00005	ABC_tran	18.18
PF00106	adh_short	7.27
PF13561	adh_short_C2	6.36
PF13410	GST_C_2	3.64
PF07690	MFS_1	2.73
PF01047	MarR	2.73
PF12704	MacB_PCD	1.82
PF12697	Abhydrolase_6	0.91
PF08309	LVIVD	0.91
PF00701	DHDPS	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0329	4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase	Cell wall/membrane/envelope biogenesis [M]	1.82
COG5276	Uncharacterized secreted protein, contains LVIVD repeats, choice-of-anchor domain	Function unknown [S]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.45 %
All Organisms	root	All Organisms	44.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.45 %
cellular organisms	root	All Organisms → cellular organisms	44.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.45 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	18.18 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	4.55 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.91 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.91 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.45 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	11.82 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	4.55 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.82 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.91 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.91 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.45 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	11.82 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	4.55 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.82 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.91 %
Acidobacteria bacterium 13_1_40CM_2_68_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_68_5	0.91 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.45 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	11.82 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	4.55 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.82 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.91 %
Acidobacteria bacterium 13_1_40CM_2_68_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_68_5	0.91 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.45 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	11.82 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4.55 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.82 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.91 %
Acidobacteria bacterium 13_1_40CM_2_68_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_68_5	0.91 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101290636	Not Available	711	Open in IMG/M
3300000559\|F14TC_101049871	Not Available	524	Open in IMG/M
3300002908\|JGI25382J43887_10165677	Not Available	1104	Open in IMG/M
3300004082\|Ga0062384_100578726	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300005332\|Ga0066388_100867656	Not Available	1485	Open in IMG/M
3300005445\|Ga0070708_101167653	Not Available	720	Open in IMG/M
3300005467\|Ga0070706_101668846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_68_5	581	Open in IMG/M
3300005471\|Ga0070698_100466665	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1199	Open in IMG/M
3300005518\|Ga0070699_101107052	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	727	Open in IMG/M
3300005536\|Ga0070697_101007015	Not Available	741	Open in IMG/M
3300005610\|Ga0070763_10260817	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300005764\|Ga0066903_102048140	Not Available	1100	Open in IMG/M
3300005764\|Ga0066903_105864097	Not Available	645	Open in IMG/M
3300005842\|Ga0068858_100176699	All Organisms → cellular organisms → Bacteria	2015	Open in IMG/M
3300005842\|Ga0068858_100509068	All Organisms → cellular organisms → Bacteria	1164	Open in IMG/M
3300006845\|Ga0075421_101748384	All Organisms → cellular organisms → Bacteria → Proteobacteria	671	Open in IMG/M
3300006871\|Ga0075434_102059544	Not Available	576	Open in IMG/M
3300007255\|Ga0099791_10407495	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	655	Open in IMG/M
3300009012\|Ga0066710_100625697	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1635	Open in IMG/M
3300009088\|Ga0099830_10339942	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1205	Open in IMG/M
3300009090\|Ga0099827_11024027	Not Available	716	Open in IMG/M
3300009137\|Ga0066709_103952148	Not Available	539	Open in IMG/M
3300009162\|Ga0075423_10823948	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	982	Open in IMG/M
3300009553\|Ga0105249_12058090	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300009698\|Ga0116216_10622331	Not Available	650	Open in IMG/M
3300010047\|Ga0126382_11238655	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	671	Open in IMG/M
3300010048\|Ga0126373_10063633	All Organisms → cellular organisms → Bacteria	3312	Open in IMG/M
3300010048\|Ga0126373_10165265	All Organisms → cellular organisms → Bacteria	2117	Open in IMG/M
3300010048\|Ga0126373_12934145	Not Available	532	Open in IMG/M
3300010159\|Ga0099796_10529579	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300010359\|Ga0126376_12862259	Not Available	532	Open in IMG/M
3300010361\|Ga0126378_11124656	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	885	Open in IMG/M
3300010376\|Ga0126381_100167852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2901	Open in IMG/M
3300010376\|Ga0126381_100596308	Not Available	1571	Open in IMG/M
3300010376\|Ga0126381_101987106	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300010376\|Ga0126381_103830846	Not Available	587	Open in IMG/M
3300010379\|Ga0136449_102502837	Not Available	740	Open in IMG/M
3300010397\|Ga0134124_10823575	Not Available	929	Open in IMG/M
3300011270\|Ga0137391_11193317	Not Available	609	Open in IMG/M
3300011270\|Ga0137391_11343581	Not Available	561	Open in IMG/M
3300012096\|Ga0137389_11243993	Not Available	637	Open in IMG/M
3300012189\|Ga0137388_11915399	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	523	Open in IMG/M
3300012202\|Ga0137363_10144113	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1865	Open in IMG/M
3300012203\|Ga0137399_10630938	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	901	Open in IMG/M
3300012361\|Ga0137360_10088221	All Organisms → cellular organisms → Bacteria	2345	Open in IMG/M
3300012363\|Ga0137390_10699453	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	976	Open in IMG/M
3300012683\|Ga0137398_10036943	All Organisms → cellular organisms → Bacteria	2815	Open in IMG/M
3300012917\|Ga0137395_10880440	Not Available	648	Open in IMG/M
3300012922\|Ga0137394_11059554	Not Available	672	Open in IMG/M
3300012923\|Ga0137359_10355199	All Organisms → cellular organisms → Bacteria	1302	Open in IMG/M
3300012925\|Ga0137419_11398799	Not Available	590	Open in IMG/M
3300012925\|Ga0137419_11716048	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300012927\|Ga0137416_11202651	Not Available	682	Open in IMG/M
3300012929\|Ga0137404_11500348	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	624	Open in IMG/M
3300012930\|Ga0137407_10068887	All Organisms → cellular organisms → Bacteria	2940	Open in IMG/M
3300012944\|Ga0137410_11278402	Not Available	634	Open in IMG/M
3300012948\|Ga0126375_11555080	Not Available	568	Open in IMG/M
3300012971\|Ga0126369_10894168	Not Available	973	Open in IMG/M
3300012971\|Ga0126369_11533446	Not Available	756	Open in IMG/M
3300013297\|Ga0157378_10833948	Not Available	949	Open in IMG/M
3300015241\|Ga0137418_10606167	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300015245\|Ga0137409_10271614	All Organisms → cellular organisms → Bacteria → Proteobacteria	1499	Open in IMG/M
3300015264\|Ga0137403_10219336	Not Available	1825	Open in IMG/M
3300016270\|Ga0182036_11326992	Not Available	601	Open in IMG/M
3300016294\|Ga0182041_11009293	Not Available	752	Open in IMG/M
3300016319\|Ga0182033_10533328	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300016371\|Ga0182034_11576829	Not Available	576	Open in IMG/M
3300016387\|Ga0182040_11745844	Not Available	532	Open in IMG/M
3300016404\|Ga0182037_10528000	Not Available	993	Open in IMG/M
3300016422\|Ga0182039_10194775	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1611	Open in IMG/M
3300016445\|Ga0182038_10557583	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	984	Open in IMG/M
3300016445\|Ga0182038_10673352	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300020199\|Ga0179592_10040145	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2122	Open in IMG/M
3300021046\|Ga0215015_10548149	Not Available	1058	Open in IMG/M
3300021171\|Ga0210405_10592400	All Organisms → cellular organisms → Bacteria → Proteobacteria	864	Open in IMG/M
3300021180\|Ga0210396_10825549	Not Available	794	Open in IMG/M
3300021401\|Ga0210393_10828201	Not Available	752	Open in IMG/M
3300021403\|Ga0210397_10506649	All Organisms → cellular organisms → Bacteria → Proteobacteria	915	Open in IMG/M
3300021474\|Ga0210390_10615533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	910	Open in IMG/M
3300021560\|Ga0126371_10484061	Not Available	1385	Open in IMG/M
3300022712\|Ga0242653_1095500	Not Available	539	Open in IMG/M
3300025906\|Ga0207699_10462441	Not Available	912	Open in IMG/M
3300025910\|Ga0207684_10898468	Not Available	745	Open in IMG/M
3300026035\|Ga0207703_10156574	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1992	Open in IMG/M
3300026551\|Ga0209648_10322693	Not Available	1086	Open in IMG/M
3300026551\|Ga0209648_10755630	Not Available	531	Open in IMG/M
3300026998\|Ga0208369_1029463	Not Available	542	Open in IMG/M
3300028047\|Ga0209526_10532399	Not Available	761	Open in IMG/M
3300028536\|Ga0137415_10491466	Not Available	1035	Open in IMG/M
3300030730\|Ga0307482_1030435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1199	Open in IMG/M
3300031057\|Ga0170834_109594394	Not Available	599	Open in IMG/M
3300031446\|Ga0170820_10358230	Not Available	1041	Open in IMG/M
3300031681\|Ga0318572_10485291	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300031719\|Ga0306917_11539518	Not Available	511	Open in IMG/M
3300031724\|Ga0318500_10711423	Not Available	512	Open in IMG/M
3300031768\|Ga0318509_10391974	Not Available	777	Open in IMG/M
3300031820\|Ga0307473_10543548	Not Available	792	Open in IMG/M
3300031823\|Ga0307478_11158887	Not Available	644	Open in IMG/M
3300031859\|Ga0318527_10452782	Not Available	547	Open in IMG/M
3300031890\|Ga0306925_10905712	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300031910\|Ga0306923_11038446	Not Available	888	Open in IMG/M
3300031912\|Ga0306921_10586253	All Organisms → cellular organisms → Bacteria → Proteobacteria	1291	Open in IMG/M
3300031941\|Ga0310912_10422958	Not Available	1038	Open in IMG/M
3300031941\|Ga0310912_10875033	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	692	Open in IMG/M
3300031954\|Ga0306926_11131890	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300032076\|Ga0306924_11261650	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	796	Open in IMG/M
3300032076\|Ga0306924_12135351	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300032089\|Ga0318525_10704391	Not Available	514	Open in IMG/M
3300032205\|Ga0307472_102592607	Not Available	517	Open in IMG/M
3300032261\|Ga0306920_104439891	Not Available	502	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.73%
Host-Associated	Host-Associated	7.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.82%
Plants	Host-Associated → Plants	7.27%
Aquatic	Environmental → Aquatic	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.73%
Freshwater	Environmental → Aquatic → Freshwater	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.09%
Loam	Environmental → Terrestrial → Soil → Loam	12.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.55%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.73%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.73%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.91%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.91%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	24.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.36%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.55%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.73%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.73%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.82%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.91%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026998	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF046 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1012906361	3300000364	Soil	MTNDSKNRKGVFGRVIEALGAWGNTMDYTPRDYVLDRLGNLEREVLLMRDELRALSALNTAGGRAKPAPSPPAGAR*
F14TC_1010498711	3300000559	Soil	VFGRLIEAMRAWEHAEDYRPYDYVLDRVSTLEREVSLMRDELRALSALNSAGGRAKPAPSPPAGAR*
JGI25382J43887_101656771	3300002908	Grasslands Soil	KKRKGTFGRVIDAIVAWENAMDYTPYDYVLDRVCNLEREVLLLRDELRALPALNNAGGRLFNLNLKE*
Ga0062384_1005787261	3300004082	Bog Forest Soil	MTNDSKKKKGAFGRVIDAIAVWEKAMDYTPSDYVLDRVCNLEREVSQLREELRTFPGGNSAGSRAKPASSSSAVAP*
Ga0066388_1008676562	3300005332	Tropical Forest Soil	MTNDGKKRKGAFRRLIDAIAAWENAMDYTPHDYVVERVGNLEREVLLLRNELRAIPALNDVSDRAKSASSPPAVAR*
Ga0070708_1011676532	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTNDSKKQKGTFGRVIDAIVAWENAMDYTPYDYVLDRVCNLEREVLLLRDELRALPALNNAGDRAKPASSSPAVAR*
Ga0070706_1016688461	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTNDSKIRRGTFGRVIDAIVAWENAMDYTPYDYVLDRVCNLEREVLLLRDELRALPALNNASDPAKSASSPPAVAR*
Ga0070698_1004666652	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MTNDSKKRKETFGRVIDAIVAWKNAMDYTPYDYVLDRVCNLEREVLLLRDELRALPALNNAGDRAKPASSSPAVAR*
Ga0070699_1011070521	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MTNDSKKQKGTFGRLIDAIVAWENAMDYTPYDYVLDRVCNLEREVLLLRDELRALPALNNAGDRAKPASSSPAVAR*
Ga0070697_1010070151	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTNDSKKRKGTFGRVIDAIVAWENAMDYTPYDYVLDRVCNLEREVLLLRDELRALPALNNAGDRAKPASSSPAVAR*
Ga0070763_102608172	3300005610	Soil	MTNGSKKRKGTFGRVIDAIVAWENAMDYTPYDYVLDRVCNLEREVLLLRDEVRALPALNSACGRAKPASSSPAVAR*
Ga0066903_1020481402	3300005764	Tropical Forest Soil	MMNDSKKRKGTFGRLIDAIVAWENAMDYTPYDYVLDRICNLEREVLRLRDELRAFPALNSASDRAESASSPPAVAR*
Ga0066903_1058640972	3300005764	Tropical Forest Soil	KKRKGAFRRLIDAIAAWDNAMDYTPHDYHLERVRNLEREVLLMRNQLRAIPALNNVSDRAKSASSPPAVAR*
Ga0068858_1001766993	3300005842	Switchgrass Rhizosphere	MTNESKKRGGTLGRVIDAIVAWENAMDYTPYDYVLDRVCNLEREVLLLRDELRALPVLNNAGDRAKPASSSSAVAR*
Ga0068858_1005090682	3300005842	Switchgrass Rhizosphere	MTNDSKIRRGTFGRVIDAIVAWEKAMDYTPHDYVLDRVCNLEREVSLLRDELRALPALNNAGGRLSNLKE*
Ga0075421_1017483841	3300006845	Populus Rhizosphere	MTNDNKKRKGTFGRVIDAIVAWKNAMDYTPYDYVLDRVCNLEREVLLLRDELRALPALNNAGDRAKPASSSPAVAR*
Ga0075434_1020595443	3300006871	Populus Rhizosphere	MTNDNKKRKGTFGRVIDAIVAWENAMDYTPYDYVLDRVCNLEREVLLLRDELRALPALNNAGDRAKPASSSPAVAR*
Ga0099791_104074952	3300007255	Vadose Zone Soil	MTNDSKKRKGTFGRVIDAIVAWKNAMDYTPYDYVLDRVCNLEREVLLLRDELRALPALNNAGDCAKPASSSPAVTR*
Ga0066710_1006256973	3300009012	Grasslands Soil	MMNDSKKRKGTFGRVIDAIVAWENAMDYTPYDYVLDRVCNLEREVLLLRDELRASPALNNAGGRAKPASSSPAVAR
Ga0099830_103399422	3300009088	Vadose Zone Soil	MTNDSKKRKGTFGRVIDAIVAWKNAMDYTPYDYVLDRVCNLEREVLLLRDELRALPALNNAGDRAKPASSSPAVAR*
Ga0099827_110240271	3300009090	Vadose Zone Soil	MMNDSKKRKGTFGRVIDAIVAWENAMDYTPYDYVLDRVCNLEREVLLLRDELRALPALNNAGDRAKPASSSPAVAR*
Ga0066709_1039521481	3300009137	Grasslands Soil	MTYESKKQKGTFGRVIDAIVAWEKAMEYTPYDYLLDRVCNLEREILQLRDELRALPVGNSAGGPR*
Ga0075423_108239482	3300009162	Populus Rhizosphere	MTNDSKKRKGTFGRVIDAIVAWKNAMDYTPYDYVLDRVCNLEREVLLLRDELRALPALNNAGDRAKPASFASSCAMKRWLGRSI*
Ga0105249_120580902	3300009553	Switchgrass Rhizosphere	MTIDSKKRKRILRRVIDAIVAWENAMDYTPYDYLLDRVRTLERDVLLLRDELRALPARTNAGSPAIPASSSPAVAR*
Ga0116216_106223311	3300009698	Peatlands Soil	MTNDSTNDSKKRKGAFGRVIDAIAAWAKVIEYTPYDYVLDRVCNLEREVSQLRDELRDLPSGNSAGGRAKPTSSSPTVAR*
Ga0126382_112386552	3300010047	Tropical Forest Soil	MTNDSKKRKGTFGRVIDAIVAWENAMDYTPYDYVLDRVCNLEREVLLLRDELRALPALNTAGDRAKPASSSPAVAR*
Ga0126373_100636334	3300010048	Tropical Forest Soil	MTNDGKKRKGAFRRLIDAIAAWENAMDYTPHDYVVERVGNLEREVLLLRNELRAIPALNNVSDRAKSASSPPAVAR*
Ga0126373_101652653	3300010048	Tropical Forest Soil	MTNDNKKRKGTFGRLIDAIVAWENAMEYTHDDYVLDRICNLEREVMQLRDELRALPALHDASDRAKSSSSPTAVAR*
Ga0126373_129341451	3300010048	Tropical Forest Soil	MPNDSKKRQGTFGRVIDAIVAWENAMDYTPYDHVLDRVCNLEREVLMLRDELRALPALNKAGGRLFNLNLKE*
Ga0099796_105295792	3300010159	Vadose Zone Soil	MEVGMTNDSKKRKGTFGRVIDVIVAWENAMDYTPYDYVLDRVCNLEREVLLLRDELRASPALNKAGGRLSNLNLKE*
Ga0126376_128622591	3300010359	Tropical Forest Soil	MTNDSKKRKVTFGRVIDAIVAWENAMDYTPYDYILDRVCNLEREVLLLSDELRALPALNNTGGRAKPESS
Ga0126378_111246562	3300010361	Tropical Forest Soil	MTNDSKKRKGTFGRLIDAIVAWENAMDYTPYDYVLDRVCNLEREVLLLRDELRALPALNTAGDRAKPASSSPAVAR*
Ga0126381_1001678524	3300010376	Tropical Forest Soil	MMNDSKKRKGTFGRLIDAIVAWENAMDYTPYDYVLDRVCNLEREVLQLRNELRALPALNNASDRAKSA*
Ga0126381_1005963082	3300010376	Tropical Forest Soil	MTNNNKKRKGTFGRVIDAIVAWENAMDYTAHDYVLDRVCNLEREVLLFRDELRALHALNNASDRAKSASSPPAVAR*
Ga0126381_1019871062	3300010376	Tropical Forest Soil	MTNDSKKRKGTFGRLIDAIVAWENAMDYTPYDYVLDRVCNLEREVLLLRDELRALPALNNASDPAKSASSPPGVAR*
Ga0126381_1038308462	3300010376	Tropical Forest Soil	MTSDSKKRKGTFGRVIDAIVAWANAMERTPYDYVLDRVCNLEREVLLLRDELSALRALDSAGGRAKPASSSPTVAR*
Ga0136449_1025028372	3300010379	Peatlands Soil	MTNDSTNDSKKRKGAFGRVIDAIAAWAKVIEYTPYDYVLDRVCNLEREVSQLRDELRDLPSGNSAGGRAKPASSSPTVPR*
Ga0134124_108235752	3300010397	Terrestrial Soil	MTNESKKRRGTLGRVIDAIVAWENAMDYTPYDYVLNRVCNLEREVLLLRDELRALLVLNNAGERAKPASSSSAVAR*
Ga0137391_111933171	3300011270	Vadose Zone Soil	MTNDGKKRKGTFGRVIDAIVAWENAMDYTPYDYVLDRICNLEREVLLLRDELRASPALNKAGDRLSNLNLKE*
Ga0137391_113435811	3300011270	Vadose Zone Soil	MTNESKKQKGAFGRVIDAIAAWEKAMDYTPYDYVQDRVSNLEREVSQLRDELRALPAGDSAGGRVNPTSSSSGVAR*
Ga0137389_112439931	3300012096	Vadose Zone Soil	ESKKQRGAFGRVLDAIVAWENALEYRPYDYVLDRVCNLEREVLLLRDELRALPALNNAGDRAKPASSSPAVAR*
Ga0137388_119153991	3300012189	Vadose Zone Soil	MMNDSKKRKGTFGRVIDAIVAWENAMDYTPYDYVLDRVCNLEREVLLLRDELRALPALNNAGGRLFNLNLKE*
Ga0137363_101441132	3300012202	Vadose Zone Soil	MTNDGKKRKGTFGRVIDAIVAWENAMDYTPYDYVLDRVCNLEREVLLLRDELRASPALNKAGGRLSNLNLKE*
Ga0137399_106309382	3300012203	Vadose Zone Soil	MTNDSKKRKGTLGRVIDAIGAWENAMDYTPYDYVLDRVCNLEREVLLLRDELRASPALNNAGGRAKPASSSPAVAR*
Ga0137360_100882214	3300012361	Vadose Zone Soil	MTNDSKKRKRILGRVIDAIVAWENAMDYTPYDYVLDRVCNLEREVLLLRDELSALNSAGGRLFNPKE*
Ga0137390_106994532	3300012363	Vadose Zone Soil	MTNDSKKRKGTFGRVIDAIVAWKNAMDYTPYDYVLDRVCNLEREVLLLRDELRALPALNNAGGRLFNLNLKE*
Ga0137398_100369434	3300012683	Vadose Zone Soil	MTNDGKKRKGTFGRVIDAIVAWENAMDYTPYDYILDRVCNLEREVLLLRDELRASPALNKAGGRLSNLNLKE*
Ga0137395_108804401	3300012917	Vadose Zone Soil	MTNGSKKRKGTLGRVIDAIGAWENAMDYTPYDYVLDRVCNLEREVLLLRDELRASPALNNARGRAKPASSSPAVAR*
Ga0137394_110595541	3300012922	Vadose Zone Soil	MMNDSKKRKGTFGRVIDAIVAWENAMDYTPYDYVLDRVCNLEREVLLLRDELRASPALNKAGGRLSNLNLKE*
Ga0137359_103551992	3300012923	Vadose Zone Soil	MTNDSKKRQGTLGRVIDALGAWENAMDYTPYDYVLDRVCNLEREVLLLRDELRASSARNNAGACAKPPSSSPAVAR*
Ga0137419_113987992	3300012925	Vadose Zone Soil	MTNESKKQKGTFGRVIDAITTWEKAMEYTPYDYVLDRVCNLEREVLQLRDELRALPAGNSAGGRAKPASSSPTEPR*
Ga0137419_117160482	3300012925	Vadose Zone Soil	TNDSKKRKGTLGRVIDAIGAWENAMDYIPYDYVLDRVCNLEREVLLLRDELRASPALNNAGGCAKPASSSPAVAR*
Ga0137416_112026511	3300012927	Vadose Zone Soil	MTNDGKKRKGTFGRVIDAIVAWENAMDYTPYDYVLDHVCNLEREVLLLRDELRASPALNKAGGRLSNLNLKE*
Ga0137404_115003482	3300012929	Vadose Zone Soil	MTNDSKKRKGTLGRVIDAIGAWENAMDYTPYDYVLDRVCNLEREVLLLRDELRALPALNNAGGRLFNLNLKE*
Ga0137407_100688875	3300012930	Vadose Zone Soil	MTNDSKKRKGTLRRVIDAIGAWENAMDYTPYDYVLDRVCNLEREVLLLRDELRASPALNNAGGRATPASRSPAVAR*
Ga0137410_112784022	3300012944	Vadose Zone Soil	MTNTSKMRKGTFGRVIDAIVAWENAMDYTPYDYVLDRVCNLEREVLLLRDELRALPALNNAGDRAKPASSSPAVAR*
Ga0126375_115550802	3300012948	Tropical Forest Soil	MTNDSKKRKGTFGRVIDAIVAWENAMDYTPYDYVLDRVCNLEREVLLLRDELRALPALNTAGDRAK
Ga0126369_108941682	3300012971	Tropical Forest Soil	MTNNNKKRKGTFGRVIDAIVAWENAMDYTPYDYILDRVCNLEREVLLLRDELRALPALNNTGGRAKPESSSPAVAR*
Ga0126369_115334461	3300012971	Tropical Forest Soil	KKRKGTFGRLIDAIVAWENAMDYTPYDYVLDRVCNLEREVLLLRDELRALLALNNASDRAKSA*
Ga0157378_108339482	3300013297	Miscanthus Rhizosphere	GRVIDAIVAWENAMDYTPYDYVLDRVCNLEREVLLLRDELRALLVLNNAGERAKPASSSSAVAR*
Ga0137418_106061672	3300015241	Vadose Zone Soil	MTNESKKQKGTFGRVIDAIVAWEKAMEYTPYDYVLDRVCNLEREVLQLRDELRALPAGNSAGGRAKPASSSPTEPR*
Ga0137409_102716142	3300015245	Vadose Zone Soil	MTNDRKKRKGTLGRVIDAIGAWENAMDYTPYDYVLDRVCNLEREVLLLREELRASPALNNPGGRAKPASSSPAVAR*
Ga0137403_102193363	3300015264	Vadose Zone Soil	MTNDSKKRKGTFGRVIDAIVAWENAMDYTPYDYVLDRVCNLEREVLLLRDELRASPALNNAGGRAKPASSSPAVAR*
Ga0182036_113269922	3300016270	Soil	MTNDSNKRKGFGLVIDAIVAWANAMEHTPYDYVLDRVCDLEREVLLLRDELSAVRALDSAGGGRAKPASSSPAVAQ
Ga0182041_110092931	3300016294	Soil	MTNYSKKRKGTFGPLIDAIVTWENAMDYTPDDCILDRVCNLEREVLQLRDELRALPALNNGSDRAKSA
Ga0182033_105333283	3300016319	Soil	MTNDSNKRKGFGRVVDAIVAGANAMEHTPYDYVLDRVCNLEREVLLLRDELSALRALDSAGGGRAKPASS
Ga0182034_115768291	3300016371	Soil	MTNNSKKRKGTFGRLIDAIVAWENAMDYTPYDYVLDRVCNLEREVLQLRDELRALPALNNASDRAKSASSSPAVAR
Ga0182040_117458441	3300016387	Soil	MTNDSNKRKGRFGRIIVAWANAMERTPYDYVLDRVCNLEREVLLLRDELSALRALDSAGGRAKPASSSPAVAQ
Ga0182037_105280001	3300016404	Soil	MTNNSKKRKGTFGRLIDAIVAWENAMDYTPYDYVLDRFSNLEREVLLLRNELRALPALNNGSDRAKSA
Ga0182039_101947753	3300016422	Soil	MTNNSKKRKGTFGRLIDAIVAWENAMDYTPHDYVLDRVCNLEREVLLLRDEVRALPALNNASDRAKSASSPPAVAR
Ga0182038_105575833	3300016445	Soil	MTNDSKKRRGTFGRLIDAIVAWENAMDLTAYDYVLDRVCNLEREVLQLRDELRALPALNIASDRAKSASSPPAIVR
Ga0182038_106733522	3300016445	Soil	MTNDGNKRKERFGRVIDAIVAWANAMEHTPYDYVLDRVCNLEHEVLLLRDELSALRALDSAGGRARPTSSSPAVAQ
Ga0179592_100401453	3300020199	Vadose Zone Soil	MTNDGKKRKGTFGRVIDAIVAWENAMDYTPYDYVLDRVCNLEREVLLLRDELRASPALNKAGGRLSNLNLKE
Ga0215015_105481492	3300021046	Soil	MTNDSKKQKGTFGRVIDAIVAWENAMDYTDDVLDRVNNLEREVLLLRDELRALPALNKAGGRLFNLNPKE
Ga0210405_105924002	3300021171	Soil	MTNESKKQKGTFGRVIDAIATWEKAMEYTPYDYVLDRVCNLEREVLQLRDELRALPAGNSAGGRAKPASSSPTEPRWREGPANL
Ga0210396_108255492	3300021180	Soil	MTNESKKQKGAFGRVIDAIAAWEKAMDYTPYDYVQDRVSNLEREVLQLRDELRALPAGDSAGGRANPTSSSSGVAR
Ga0210393_108282011	3300021401	Soil	ESKKQKGAFGRVMDAIAAWEKAMDYTPSDYVLDRVCNLEREVSQLRDELRAFPAGNRAGGRAKPASSSSAVAR
Ga0210397_105066492	3300021403	Soil	MTNESKKQKGTFGRVIDAIAAWEKAMDYTPYDYVQDRVSNLEGQVSQLRDELRALPAGNSAGGRTKPASSSPTEPR
Ga0210390_106155332	3300021474	Soil	MTNESKKQKGAFGRVIDAIAAWEKAMDYTPSDYVLDRVCNLEREVSQLRDELRAFPAGNSAGSRATPASSSSAVAR
Ga0126371_104840613	3300021560	Tropical Forest Soil	MTNDSKKRKGTFGRLIDAIVAWENAMDYTPYDYVLDRVCNLEREVLLLRDELRALPALNNASDRAKSASSPPEVAR
Ga0242653_10955001	3300022712	Soil	MTNDNKKQKGAFGRVIDAIVAWEKAMDYTPYDYVQDRVSNLEREVLQLRDELRALPAGNSAGGRAKPASSSPTVPR
Ga0207699_104624412	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MTNDSKKRQGTFGRLIDAIVAWENAMDYTPYDDVLHRVRILERDVLLLRDELRTLPAPNSAADRAKPASSPPAKLCA
Ga0207684_108984682	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTNDSKKRKGTFGRVIDAIVAWENAMDYTPYDYVLDRVCNLEREVLLLRDELRALPALNNAGDRAKPASSSPAVAR
Ga0207703_101565742	3300026035	Switchgrass Rhizosphere	MTNESKKRGGTLGRVIDAIVAWENAMDYTPYDYVLDRVCNLEREVLLLRDELRALPVLNNAGDRAKPASSSSAVAR
Ga0209648_103226932	3300026551	Grasslands Soil	MTNESKKQKGTFGRVIDAIVAWEKAMEYTPYDYVLDRVCNLEREVLQLRDELRALPAGNSAGGRAKPASSSPTVPR
Ga0209648_107556301	3300026551	Grasslands Soil	MTNDSKKRKGTFGRVIDAIAAWENAMDYTPYDYVLDRVCNLEREVSLLRDELRALPALDSAGGRAKPAPSSPAVAR
Ga0208369_10294631	3300026998	Forest Soil	MTNESKKQKGTFGRVVDAIAAWEKAMDYTPYDYVQDRVSNLEGQVSQLRDELRALPAGNSAGGRAKPASSSPTVP
Ga0209526_105323991	3300028047	Forest Soil	MTNDSKKRKGTFGRVIDAIVAWENAMDYTPYDYVLDRVCNLEREVLLLRDEVRALPALNSASGGAKPASS
Ga0137415_104914663	3300028536	Vadose Zone Soil	MTNDGKKRKGTFGRVIDAIVAWENAMDYTPYDYVLDHVCNLEREVLLLRDELRASPALNKAGGRLSNLNLKE
Ga0307482_10304352	3300030730	Hardwood Forest Soil	MTNESKKQKGAFGRVIDAIVAWEKALEYGPYDYVLDRVCNLEREVLELRDELRALPTGNSAGGRAKPASSSPTVPR
Ga0170834_1095943942	3300031057	Forest Soil	MTNESKKQKGAFGRVIDAIAAWEKAMDYTPSDYVLDRVRNLEREVSQLRDELRAFPAGNSARSRAKPASSSSAVAR
Ga0170820_103582301	3300031446	Forest Soil	IICSETEVSMTNDSKKQKGAFGRVIDAIAAWEKAMDYTPSDYVLDRVCNLEREVSQLRDELRAFPAGNSAGSRAKPASSSSAVAR
Ga0318572_104852911	3300031681	Soil	MTNNSKKRKGTFGRLIDAIVAWENAMDYTPHDYVLDRVCNLEREVLLLRDELRALPALNNASDRAKSASSPPAIAR
Ga0306917_115395181	3300031719	Soil	MTNDGKKRKGAFRRLIDAIAAWENAMDYTPHDYVLERVGNLERDVLLLRNELRAIPALNNVSDRAKSASSPPAVAR
Ga0318500_107114231	3300031724	Soil	MTNDSKKRKGTFGRLIDAIVAWENAMDYTPYDYVLDRVCNLEREVLQLRNELRALPALNNASDRAKSA
Ga0318509_103919741	3300031768	Soil	MTNNSKKRKGTFGRLIDAIVAWENAMDYTPHDYVLDRVCNLEREVLLLRDELRALPALNNASDRAKSASSPPA
Ga0307473_105435482	3300031820	Hardwood Forest Soil	MTNDSKKRKPILGRVIDAIVAWEHAMDYTPYDYVLDRVCNLEREVLLLRDEVRALPALNSACGRAKPASSSPAVAR
Ga0307478_111588872	3300031823	Hardwood Forest Soil	MTNESKKQKGTFGRVIDAIATWEKAMEYTPYDYVLDRVCNLEREVLQLRDELRALPAGNSAGGRAKPALSSPTEPR
Ga0318527_104527821	3300031859	Soil	MTNDGNKRKERFGRVIDAIVAWANAMEHTPYDYVLDRVCNLEHEVLLLRDELSALRALDNAGGHVRLASSSPAVTQ
Ga0306925_109057121	3300031890	Soil	MTNYSKKRKGTFGPLIDAIVTWENAMDYTPDDCVLDRVCNLEREVLQLRDELRALPALNNASDRAKSASSPPAIVR
Ga0306923_110384462	3300031910	Soil	MTNDSKKRKGTFGRLIDAIVAWENAMDYTPYDYVLDRVCNLEREVLQLRDELRALPALNNASDRAKSASSPPAVAR
Ga0306921_105862533	3300031912	Soil	MTNDGKKRKGAFRRLIDAIAAWENAMDYTPHDYVVERVGNLEREVLLLRNELRAIPALNDVSDRAKSASSPPGVA
Ga0310912_104229583	3300031941	Soil	DSKKRRGTFGRLIDAIVAWENAMDLTAYDYVLDRVCNLEREVLQLRDELRALPALNNASDRAKSA
Ga0310912_108750331	3300031941	Soil	MTNDSNKRKGFGRVVDAIVAGANAMEHTPYDYVLDRVCNLEREVLLLRDELSALRALDSAGGGRAKPASSSPAVAQ
Ga0306926_111318903	3300031954	Soil	MTNDSKKRRGTFGRLIDAIVAWENAMDLTAYDYVLDRVCNLEREVLQLRDELRALPALNNASDRAKSASSPPAVAR
Ga0306924_112616501	3300032076	Soil	MTNYSKKRKGTFGPLIDAIVTWENAMDYTPDDCILDRVCNLEREVLQLRDELRALPALNNASDRAKSASSPPAIVR
Ga0306924_121353512	3300032076	Soil	MTNDGNKRKERFGRVIDAIVAWANAMEHTPYDYVLDRVCNLEHEVLLLRDELSALRALDSAGGHVRLASSSPAVTQ
Ga0318525_107043911	3300032089	Soil	MTNDGNKRKERFGRVIDAIVAWANAMEHTPYDYVLDRVCNLERQVSELRDELRELPSGNSAGGRTKPTSSSPTVA
Ga0307472_1025926071	3300032205	Hardwood Forest Soil	MTNDSKKRKGTFGRVIDAIVAWENAMDYTPYDYVLDRVCNLEREVLLLRDELSALNSAGGRLFNPKE
Ga0306920_1044398911	3300032261	Soil	MTNDSKKRRGTFGRLIDAIVAWENAMDLTAYDYVLDRVCNLEREVLQLRDELRALPALNNASDRAKSASSPPAIV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086751

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences