Metagenome / Metatranscriptome Family F086704

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086704
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	68 residues
Representative Sequence	METIEYTPAQASAVANLPLPAVHKLIERRLIRPRRLRTGRSIQRMLSREQVLYLRLEAEGVRLLPI
Number of Associated Samples	100
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	44.23 %
% of genes near scaffold ends (potentially truncated)	91.82 %
% of genes from short scaffolds (< 2000 bps)	87.27 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (83.636 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (9.091 % of family members)
Environment Ontology (ENVO)	Unclassified (20.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.545 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.79% β-sheet: 14.89% Coil/Unstructured: 55.32%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF01596	Methyltransf_3	2.73
PF04255	DUF433	2.73
PF08482	HrpB_C	1.82
PF03992	ABM	1.82
PF00589	Phage_integrase	1.82
PF13533	Biotin_lipoyl_2	1.82
PF00436	SSB	0.91
PF06114	Peptidase_M78	0.91
PF08448	PAS_4	0.91
PF16640	Big_3_5	0.91
PF00076	RRM_1	0.91
PF09861	Lar_N	0.91
PF02915	Rubrerythrin	0.91
PF02321	OEP	0.91
PF00753	Lactamase_B	0.91
PF02687	FtsX	0.91
PF08241	Methyltransf_11	0.91
PF12844	HTH_19	0.91
PF13490	zf-HC2	0.91
PF08867	FRG	0.91
PF01850	PIN	0.91
PF13784	Fic_N	0.91
PF00378	ECH_1	0.91
PF04337	DUF480	0.91
PF13701	DDE_Tnp_1_4	0.91
PF01339	CheB_methylest	0.91
PF04542	Sigma70_r2	0.91
PF00732	GMC_oxred_N	0.91
PF09278	MerR-DNA-bind	0.91
PF00682	HMGL-like	0.91
PF06245	DUF1015	0.91
PF08401	ArdcN	0.91
PF00106	adh_short	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG4123	tRNA1(Val) A37 N6-methylase TrmN6	Translation, ribosomal structure and biogenesis [J]	2.73
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	2.73
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	2.73
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	2.73
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.82
COG1643	HrpA-like RNA helicase	Translation, ribosomal structure and biogenesis [J]	1.82
COG2201	Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains	Signal transduction mechanisms [T]	1.82
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.91
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.91
COG4227	Antirestriction protein ArdC	Replication, recombination and repair [L]	0.91
COG4198	Uncharacterized conserved protein, DUF1015 family	Function unknown [S]	0.91
COG3132	Uncharacterized conserved protein YceH, UPF0502 family	Function unknown [S]	0.91
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	0.91
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.91
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.91
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.91
COG0789	DNA-binding transcriptional regulator, MerR family	Transcription [K]	0.91
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.55 %
Unclassified	root	N/A	15.45 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.55 %
Unclassified	root	N/A	15.45 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.64 %
Unclassified	root	N/A	15.45 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	63.64 %
Unclassified	root	N/A	15.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.82 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.45 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	9.09 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.45 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.45 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	8.18 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.55 %
Candidatus Angelobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter	0.91 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.91 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.91 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.45 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8.18 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.55 %
unclassified Candidatus Angelobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter	0.91 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	0.91 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.91 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.45 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.55 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	1.82 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.91 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.91 %
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	0.91 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.91 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	0.91 %
Aquamicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquamicrobium	0.91 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.45 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.55 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	1.82 %
Acidicapsa acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	0.91 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.91 %
Aquamicrobium defluvii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquamicrobium → Aquamicrobium defluvii	0.91 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	0.91 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.91 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.91 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.45 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.55 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	1.82 %
unclassified Symbiodinium	no rank	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium	0.91 %
Acidicapsa acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	0.91 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.91 %
Aquamicrobium defluvii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquamicrobium → Aquamicrobium defluvii	0.91 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.91 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.91 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.45 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.55 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	1.82 %
Symbiodinium sp. CCMP2456	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. CCMP2456	0.91 %
Acidicapsa acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	0.91 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.91 %
Aquamicrobium defluvii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquamicrobium → Aquamicrobium defluvii	0.91 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.91 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.91 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100634633	All Organisms → cellular organisms → Bacteria	2463	Open in IMG/M
3300000955\|JGI1027J12803_105006863	Not Available	757	Open in IMG/M
3300001175\|JGI12649J13570_1025727	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300002914\|JGI25617J43924_10192052	All Organisms → cellular organisms → Bacteria → Acidobacteria	679	Open in IMG/M
3300002914\|JGI25617J43924_10251663	All Organisms → cellular organisms → Bacteria → Acidobacteria	598	Open in IMG/M
3300003352\|JGI26345J50200_1025886	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300003372\|JGI26336J50218_1006504	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300004080\|Ga0062385_11300265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquamicrobium → Aquamicrobium defluvii	501	Open in IMG/M
3300004092\|Ga0062389_103905149	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300004635\|Ga0062388_101396252	All Organisms → cellular organisms → Bacteria → Acidobacteria	703	Open in IMG/M
3300005167\|Ga0066672_10099733	All Organisms → cellular organisms → Bacteria	1769	Open in IMG/M
3300005334\|Ga0068869_100901708	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300005439\|Ga0070711_101213668	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300005455\|Ga0070663_102072281	Not Available	512	Open in IMG/M
3300005554\|Ga0066661_10777068	All Organisms → cellular organisms → Bacteria → Acidobacteria	560	Open in IMG/M
3300005602\|Ga0070762_11132816	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300005842\|Ga0068858_101677595	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300006052\|Ga0075029_101268511	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300006893\|Ga0073928_10138758	All Organisms → cellular organisms → Bacteria	1976	Open in IMG/M
3300009545\|Ga0105237_10231201	All Organisms → cellular organisms → Bacteria → Acidobacteria	1850	Open in IMG/M
3300009623\|Ga0116133_1139971	All Organisms → cellular organisms → Bacteria → Acidobacteria	630	Open in IMG/M
3300009635\|Ga0116117_1041162	All Organisms → cellular organisms → Bacteria → Proteobacteria	1140	Open in IMG/M
3300009636\|Ga0116112_1062378	Not Available	1084	Open in IMG/M
3300009645\|Ga0116106_1105520	All Organisms → cellular organisms → Bacteria → Acidobacteria	910	Open in IMG/M
3300010339\|Ga0074046_10190458	All Organisms → cellular organisms → Bacteria → Acidobacteria	1293	Open in IMG/M
3300010343\|Ga0074044_10557719	All Organisms → cellular organisms → Bacteria → Acidobacteria	748	Open in IMG/M
3300010358\|Ga0126370_10998930	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	764	Open in IMG/M
3300010366\|Ga0126379_10327536	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1551	Open in IMG/M
3300010379\|Ga0136449_103831983	All Organisms → cellular organisms → Bacteria → Acidobacteria	565	Open in IMG/M
3300011269\|Ga0137392_11419392	All Organisms → cellular organisms → Bacteria → Acidobacteria	553	Open in IMG/M
3300012202\|Ga0137363_10293710	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	1332	Open in IMG/M
3300012203\|Ga0137399_10951216	All Organisms → cellular organisms → Bacteria → Acidobacteria	723	Open in IMG/M
3300012209\|Ga0137379_11219967	All Organisms → cellular organisms → Bacteria → Acidobacteria	659	Open in IMG/M
3300012362\|Ga0137361_10860010	All Organisms → cellular organisms → Bacteria → Acidobacteria	824	Open in IMG/M
3300012532\|Ga0137373_10285567	All Organisms → cellular organisms → Bacteria → Acidobacteria	1317	Open in IMG/M
3300012960\|Ga0164301_10283810	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M
3300014838\|Ga0182030_10097213	All Organisms → cellular organisms → Bacteria → Acidobacteria	4099	Open in IMG/M
3300016404\|Ga0182037_11224057	All Organisms → cellular organisms → Bacteria → Acidobacteria	660	Open in IMG/M
3300016422\|Ga0182039_10376671	Not Available	1198	Open in IMG/M
3300017823\|Ga0187818_10175968	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300017935\|Ga0187848_10470922	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300017937\|Ga0187809_10028609	All Organisms → cellular organisms → Bacteria	1778	Open in IMG/M
3300017970\|Ga0187783_10403557	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300017970\|Ga0187783_10807739	All Organisms → cellular organisms → Bacteria → Acidobacteria	676	Open in IMG/M
3300017995\|Ga0187816_10382492	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300018005\|Ga0187878_1307469	All Organisms → cellular organisms → Bacteria → Acidobacteria	566	Open in IMG/M
3300018030\|Ga0187869_10270076	Not Available	821	Open in IMG/M
3300018033\|Ga0187867_10194449	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	1155	Open in IMG/M
3300018038\|Ga0187855_10460386	All Organisms → cellular organisms → Bacteria → Acidobacteria	741	Open in IMG/M
3300018090\|Ga0187770_10432227	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. CCMP2456	1036	Open in IMG/M
3300019082\|Ga0187852_1216436	All Organisms → cellular organisms → Bacteria → Acidobacteria	785	Open in IMG/M
3300019788\|Ga0182028_1020793	All Organisms → cellular organisms → Bacteria	1156	Open in IMG/M
3300020199\|Ga0179592_10234859	All Organisms → cellular organisms → Bacteria → Acidobacteria	826	Open in IMG/M
3300020579\|Ga0210407_10313033	All Organisms → cellular organisms → Bacteria → Acidobacteria	1226	Open in IMG/M
3300021181\|Ga0210388_10170647	All Organisms → cellular organisms → Bacteria	1896	Open in IMG/M
3300021401\|Ga0210393_11186072	All Organisms → cellular organisms → Bacteria → Acidobacteria	615	Open in IMG/M
3300021405\|Ga0210387_11455101	Not Available	588	Open in IMG/M
3300021474\|Ga0210390_11034677	All Organisms → cellular organisms → Bacteria → Acidobacteria	670	Open in IMG/M
3300021559\|Ga0210409_11690373	All Organisms → cellular organisms → Bacteria → Acidobacteria	509	Open in IMG/M
3300023232\|Ga0224516_1015384	Not Available	1057	Open in IMG/M
3300025414\|Ga0208935_1026276	All Organisms → cellular organisms → Bacteria → Acidobacteria	771	Open in IMG/M
3300025612\|Ga0208691_1062814	All Organisms → cellular organisms → Bacteria → Acidobacteria	839	Open in IMG/M
3300025916\|Ga0207663_10857283	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300026285\|Ga0209438_1050983	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1364	Open in IMG/M
3300026557\|Ga0179587_10546745	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	761	Open in IMG/M
3300026557\|Ga0179587_10978081	Not Available	557	Open in IMG/M
3300027330\|Ga0207777_1006317	Not Available	2684	Open in IMG/M
3300027376\|Ga0209004_1095603	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300027674\|Ga0209118_1224718	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300027692\|Ga0209530_1228333	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	509	Open in IMG/M
3300027795\|Ga0209139_10165607	All Organisms → cellular organisms → Bacteria → Acidobacteria	782	Open in IMG/M
3300027857\|Ga0209166_10470086	All Organisms → cellular organisms → Bacteria → Acidobacteria	648	Open in IMG/M
3300027879\|Ga0209169_10330225	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	802	Open in IMG/M
3300027894\|Ga0209068_10297932	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	905	Open in IMG/M
3300028560\|Ga0302144_10298961	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
3300028747\|Ga0302219_10278408	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	650	Open in IMG/M
3300028906\|Ga0308309_11348608	All Organisms → cellular organisms → Bacteria → Acidobacteria	612	Open in IMG/M
3300029636\|Ga0222749_10004986	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5519	Open in IMG/M
3300029889\|Ga0246001_1012334	Not Available	2902	Open in IMG/M
3300029914\|Ga0311359_10515843	All Organisms → cellular organisms → Bacteria → Acidobacteria	905	Open in IMG/M
3300029922\|Ga0311363_10915536	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300029922\|Ga0311363_11194246	All Organisms → cellular organisms → Bacteria → Acidobacteria	642	Open in IMG/M
3300030011\|Ga0302270_10296915	All Organisms → cellular organisms → Bacteria → Acidobacteria	891	Open in IMG/M
3300030045\|Ga0302282_1276579	All Organisms → cellular organisms → Bacteria → Acidobacteria	613	Open in IMG/M
3300030520\|Ga0311372_11581320	Not Available	801	Open in IMG/M
3300030520\|Ga0311372_11853847	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300030580\|Ga0311355_11819264	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300030815\|Ga0265746_1040452	All Organisms → cellular organisms → Bacteria → Acidobacteria	625	Open in IMG/M
3300030991\|Ga0073994_11686145	All Organisms → cellular organisms → Bacteria → Acidobacteria	749	Open in IMG/M
3300031090\|Ga0265760_10130088	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	814	Open in IMG/M
3300031234\|Ga0302325_11495365	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	870	Open in IMG/M
3300031236\|Ga0302324_102676547	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	604	Open in IMG/M
3300031753\|Ga0307477_11165056	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300031947\|Ga0310909_10077524	All Organisms → cellular organisms → Bacteria	2627	Open in IMG/M
3300031962\|Ga0307479_10021064	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6164	Open in IMG/M
3300031962\|Ga0307479_11510898	All Organisms → cellular organisms → Bacteria → Acidobacteria	628	Open in IMG/M
3300031962\|Ga0307479_11633327	All Organisms → cellular organisms → Bacteria → Acidobacteria	599	Open in IMG/M
3300032001\|Ga0306922_10104848	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2993	Open in IMG/M
3300032066\|Ga0318514_10198759	All Organisms → cellular organisms → Bacteria → Acidobacteria	1050	Open in IMG/M
3300032828\|Ga0335080_11730965	All Organisms → cellular organisms → Bacteria → Acidobacteria	612	Open in IMG/M
3300033547\|Ga0316212_1059128	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300033547\|Ga0316212_1066870	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
3300033829\|Ga0334854_066242	All Organisms → cellular organisms → Bacteria → Acidobacteria	861	Open in IMG/M
3300034282\|Ga0370492_0188741	All Organisms → cellular organisms → Bacteria → Acidobacteria	841	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.55%
Host-Associated	Host-Associated	5.45%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.91%
Aquatic	Environmental → Aquatic	23.64%
Plants	Host-Associated → Plants	5.45%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.36%
Freshwater	Environmental → Aquatic → Freshwater	20.91%
Peat	Environmental → Terrestrial → Peat	14.55%
Sediment	Environmental → Aquatic → Sediment	1.82%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.82%
Roots	Host-Associated → Plants → Roots	1.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.82%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.18%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	20.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	14.55%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.09%
Loam	Environmental → Terrestrial → Soil → Loam	9.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.82%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.82%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.82%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.91%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.36%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.45%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	14.55%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	12.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.36%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.45%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.82%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.82%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.82%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.09%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.36%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.45%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.45%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.64%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.64%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.73%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.73%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.73%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.73%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.73%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.73%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.82%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.82%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.82%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.82%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.82%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	1.82%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.91%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.91%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.91%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.91%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.91%
Peat	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001175	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300003352	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1	Environmental	Open in IMG/M
3300003372	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300009636	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300023232	Peat soil microbial communities from Stordalen Mire, Sweden - IR.F.S.T0	Environmental	Open in IMG/M
3300025414	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027330	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)	Environmental	Open in IMG/M
3300027376	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028560	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_2	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029889	Peat microbial communities from Marcell Experimental Forest bog in Minnesota, USA - MG_T3F_30cm	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300030011	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3	Environmental	Open in IMG/M
3300030045	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_3	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030815	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033547	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1	Host-Associated	Open in IMG/M
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1006346331	3300000364	Soil	MEYTPAEASAVTNLPIRAVHKLIERKLVRPRRLRKGRSVQRLLNFEQLVYLCLEAEGLQL
JGI1027J12803_1050068633	3300000955	Soil	NLPLRTVHKLIERRLIRPRLRRTGRSLQRMLTREQLLYLRLEAKGVGLLPMATRRSIAKQIEKSPEIDVVCLTEG
JGI12649J13570_10257271	3300001175	Forest Soil	MNTTEYTPAQASAVTNLPLPAVHKLIERRLIRPRRLRTGRSIQRMLSRGQVLYLRLEAEGVRLLPLASRRAIAKKIESSPEV
JGI25617J43924_101920521	3300002914	Grasslands Soil	MDTTEYTPAQASAVANLPLPAVHKLIERRLIRPRRLRTGRSIQRVLSRGQVLYL
JGI25617J43924_102516631	3300002914	Grasslands Soil	METTEYTPAQASAVANLPLPAVHKLIERRLIRPRRLRTGRSIQRMLSREQVLYLRLEAEGVRLLPIAARRTIAKKIESSPEIDTVILTE
JGI26345J50200_10258862	3300003352	Bog Forest Soil	VKAAEYTPAQASAVANLPLPAVHKLIERRLIRPRRLRMGRSIQRMLSREQVLY
JGI26336J50218_10065041	3300003372	Bog Forest Soil	MSTAEYTPAQAAAVANLPLPAVHKLIERRLIRPRRLRTGRSIQRMLSRGQVLYLRLEAEGVRLLPLAARRAIARKIESSP
Ga0062385_113002651	3300004080	Bog Forest Soil	MNTTEYTPAQASAVANLPLPAVHKLIERRLIRPRRLRTGRSIQRMLSRGQVLYLRLEAEG
Ga0062389_1039051492	3300004092	Bog Forest Soil	MDTTEYTPAQASALANLPLPAVHKLIERRLIRPRRLRTGRSIQRMLSRGQVLYLRLEAEGVRLLPLAARRAIAKKIES
Ga0062388_1013962521	3300004635	Bog Forest Soil	METIEYTPAQASAVANLPLPAVHKLIERRLIRPRRLRTGRSIQRMLSREQVLYLRLEAEGVRLLPIAARRAIAKKIESSPEIDTVILT
Ga0066672_100997333	3300005167	Soil	MEIREYTPAQASVLANLPLPAVHKLIERRLIRPRRLRSGRSIQRMLNVQQVLYLR
Ga0068869_1009017082	3300005334	Miscanthus Rhizosphere	MKNAVYTLAQASAVSGLPLKAIYKLIDAKLIRPRRKRTGRQTQRFVSQDQLIYLRLEAEGVRLLPLTMRREVAK
Ga0070711_1012136681	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MEIREYTPAQASVLANLPLPAVHKVIERRLIRPRRLRTGRVIQRMLNRQQVLYLRLEAEGVRLL
Ga0070663_1020722811	3300005455	Corn Rhizosphere	MRVDAYTPAQASAVAKLPLKAVQKLIDVRLIQPRRMRSARKIQRLLSPEQLVYLRLEAQGVRLLPLA
Ga0066661_107770681	3300005554	Soil	MDTTEYTPAQASAVANLPLPAVHKLIERRLIRPRRLRTGRSIQRMLSREQVLYLRLEAEGVRLLPILTRRAIAKKIESSPEIDF
Ga0070762_111328161	3300005602	Soil	MSMETIEYTPAQASAVANLKLPAVHKLIERRLIRPRRLRTGRSIQRMLSREQVLYLRLEA
Ga0068858_1016775952	3300005842	Switchgrass Rhizosphere	MNDAVYTPAQASAVADLPLKAVHKLIDGRLIRPRRMRVGREIQRFLSQGQLV
Ga0075029_1012685111	3300006052	Watersheds	METTEYTPAQASAVANLPLPAVHKLIERRLIRPRRLRTGRSIQRMLSREQVLY
Ga0073928_101387583	3300006893	Iron-Sulfur Acid Spring	MDTTEYTPAQASAVANLPLPAVHKLIERRLIRPRRLRTGRSIQRMLSRGQVLYLRLEAEGVRLLPLAARRAIA
Ga0105237_102312011	3300009545	Corn Rhizosphere	MEIREYTPAQASVLANLPLPAVHKLIERRLIRPRRLRTGRSIQRMLNLQQVLYLRLEAEGVRLLPV
Ga0116133_11399712	3300009623	Peatland	MGAIEYTPAQASALANLPLPAVHKLIERRLIRPRRMRTGRSVQRMLSREQVLYLRLEAEGVRLASKSRHDGRRAG*
Ga0116117_10411621	3300009635	Peatland	MNITEYTPAQASAVANLPLPAVHKLIERRLIRSRRLRTGRSIQRMLSRGKVLYLR
Ga0116112_10623781	3300009636	Peatland	METIEYTPAQASAVANLPLPAVHKLIERRLIRPRRLRTGRSIQRMLSREQVLYLRLEAEGVRL
Ga0116106_11055202	3300009645	Peatland	MDTIEYTPAQASAVANLPLPAVHKLIERRLIRPRRLRTGRSIQRMLSRAQVLYLRLEAAGVRLLPIAARRAIAKKIESSPEIDIVVLT
Ga0074046_101904582	3300010339	Bog Forest Soil	METIEFTPAQASAVANLPLRTVHKLIERRLIRPRLRRIGRSLQRMLTREQLLYLRLEAKGVRLLPIAA
Ga0074044_105577191	3300010343	Bog Forest Soil	MDTTEYTPAQASAVANLPLPAVHKLIERRLIRPRRLRTGRSIQRMLSREQVLYLRLEAEG
Ga0126370_109989302	3300010358	Tropical Forest Soil	METIEFTPAQASVVANMPLRTVHKLIERRLIRPRLRRTGRSLQRMLTREQLLYLRLEAKGVRLLPMATRRSIAR
Ga0126379_103275361	3300010366	Tropical Forest Soil	MEYYTPVQASVVAKLPLKSIHKLIDRRLIRPHRRRKGRRLERLLSEEQLIYLRLEAEGVRLLPLAARRQVAA
Ga0136449_1038319831	3300010379	Peatlands Soil	METIEYTPAQASAVANLPLRAVHKLIERRLIRPRLLRTGRSIQRMLTREQLLYLGLEAKGVRLLPIAA
Ga0137392_114193921	3300011269	Vadose Zone Soil	MNTTEYTPAQASAVANLPLPAVHKLIERRLIRPRRLRTGRSIQRMLSRFGPSEVCV
Ga0137363_102937101	3300012202	Vadose Zone Soil	MDTTEYTPAQASAVANLPLPAVHKLIERRLIRPRRRRTGRSIQRMLTREQVLYLRLEAEGVRLLPITTRRA
Ga0137399_109512161	3300012203	Vadose Zone Soil	METTEYTPAQASAVANLSLPAVHKLIERRLIRPRRLRAGRSIQRMLSREQVLYLRLEAEGVRLLPILTRRAIAKKI
Ga0137379_112199672	3300012209	Vadose Zone Soil	METIEYTPAQASAVANLPLPAVHKLIERRLIRPRRLRTGRSIQRMLSREQVLYLRLEAEGVRLLPMAARRAIAKKIESSPGIDAVVLT*
Ga0137361_108600101	3300012362	Vadose Zone Soil	METIEYTPAQASAVANLPLPAVHKVIERRLIRPRRLRIGRSIQRMLSREQVLYLRLEAEGVRLLPIAA
Ga0137373_102855671	3300012532	Vadose Zone Soil	METIEFTPAQASAVANLPLRAIHKLIDRRLIRPRLRRIGRSLQRMLTREQLLYLRLEAKGVRLLPMAARRSIAKRIEKSPEIDVM
Ga0164301_102838102	3300012960	Soil	MEIREYTPAQASVLANLPLPAVHKVIERRLIRPRRLRTGRVIQRMLNRQQVLYLRLEAEGVRLLPISARRAIAKQLEASPGKDIVVPG
Ga0164308_108043701	3300012985	Soil	METREYTPAQASVLANLPLPAVHKVIERRLIRPRRQRAGRSIQRMLNRQQV
Ga0181531_100975471	3300014169	Bog	MTDDRYTPAQGSAVASLPLKAVHKLIDNRVIRPLKGGRGKEPTRLLSRGQLVYLRLEADGVRLLPLAARREVAR
Ga0181522_100259775	3300014657	Bog	MTDDRYTPAQGSAVASLPLKAVHKLIDNRVIRPLKGGRGKEPTRLLSRRQLVYLRLEADGVRLLPLAAR
Ga0182030_100972131	3300014838	Bog	METIEYTPAQASALANLPLPAVHKLIERRLIRPRRLRTGRSIQRMLSREQVLYLRLEAEGVCL
Ga0182037_112240572	3300016404	Soil	METREFTPAQASAVANLPLRTVHKLIERRLIRPRLRRTGRSFQRMLTREQLLYLRLEAKGVRLLPMATRRAIAKKIE
Ga0182039_103766712	3300016422	Soil	METIEFTPAQASAVANLPLRTVHKLIERRLIRPRLRRIGRSLQRLLTREQLLYLRLEAKGVRLLPIAARRSIAKKIEK
Ga0187818_101759682	3300017823	Freshwater Sediment	METTEYTPAQASALANLPLPAVHKLIERHLIRPRRLRTGRSVQRMLSREQVLYLRLEAEGVSLLPIAARRAIAKKIET
Ga0187848_104709221	3300017935	Peatland	METIEYTPAQASAVANLPLPAVHKLIERRLIRPRRLRTGRSIQRMLSREQVLYLRLEAEGVRLLPIAARRAIAKKIEST
Ga0187809_100286091	3300017937	Freshwater Sediment	MEIIEYTPAQASAVAHFPLPAVHKLIERRLIRPRRLRSGRSIQRMLSREQVLYLRLE
Ga0187783_104035571	3300017970	Tropical Peatland	METIEFTPAQASAVANLPLRTVHKLIERRLIRPRLRRIGRSLQRMLTREQLLYLRLEAKGVRLLPI
Ga0187783_108077392	3300017970	Tropical Peatland	METIEFTPAQASAVANLPLRTVHKLIERRLIRPQLRRIGRSLQRMLTREQLLYLRLEAKGVRLLPIAARRSIAKKIEESPEIDVL
Ga0187816_103824921	3300017995	Freshwater Sediment	MDTTGYTPAQASAVANLPLPAVHKLIERRLIRPRRLRTGRSIQRMLNREQVLYLRLEAEGVRLLPILTRRAIAKKIE
Ga0187878_13074691	3300018005	Peatland	METIEYTPAQASAVANLPLPAVHKLIERRLIRPRRLRTGRSIQRMLSREQVLYLRLEAEGVRLLPIA
Ga0187869_102700762	3300018030	Peatland	MNDAVYTPAQASALADLPLKAVHKLIDGRLIRPRRKRVGREVQRFLSQDQLVYLRL
Ga0187867_101944494	3300018033	Peatland	YFMNNRAYTPAQASAVTELPLKAVHKLIEGHLICPRRRRVGQETKRFLSEEQLI
Ga0187855_104603861	3300018038	Peatland	MCMDTIEYTPAQASAVANLPLPAVHKLIERRLIRPRRLRTGRSIQRMLSREQVLYLRLEAEGVRLLPIAARRAIAKKIESS
Ga0187770_104322271	3300018090	Tropical Peatland	VTNLPLPAVHQLIERRLIRPRLRRNGRTTQRMLSREQILYLRLEAEGVRLLPLAARRSIARK
Ga0187852_12164361	3300019082	Peatland	METIEYTPAQASAVANLPLPAVHKLIERRLIRPRRLRTGRSIQRMLSREQVLYLRLEAEGVRLLPI
Ga0182028_10207932	3300019788	Fen	METIEYTPAQASALANLPLPAVHKLIERRLIRPRRLRTGRSIQRMLSREQVLYLRLEAEGVCLLPIAARRAIAKKIE
Ga0179592_102348591	3300020199	Vadose Zone Soil	METTEYTPAQASAVANLPLPAVHKLIERRLIRPRRLRTGRSIQRMLSREQVLYLRLEAEGVRLLPIAARRAIAKKIESSPEIDTVIL
Ga0179592_104496672	3300020199	Vadose Zone Soil	MKYTAAEASAVTNLPLRSVHKLIERRLVRPRRLRTGTSVQRLLSFEQL
Ga0210407_103130331	3300020579	Soil	MDTTEYTPAQASAVANLPLPAVHKLIERRLIRPRRLRTGRSVQRMLSRGQVLYLRLEAEGVRLLPLASRRAIAKQI
Ga0210388_101706474	3300021181	Soil	MLLILPCWGQNNCMETIEYTPAQASAVANLPLPAVHKLIERRLIRPRRLRTGRSIQRMLSREQVLYLCLEAEGVRL
Ga0210393_111860722	3300021401	Soil	METIEYTPAQASAVANLPLPAVHKLIERRLIRPRRLRTGRSIQRMLSREQV
Ga0210387_114551011	3300021405	Soil	MNDAIYTPAQASAVADLPLKAVHKLIDGRLIRPRRRRVGRETQRFLSQDQLVY
Ga0210390_110346771	3300021474	Soil	METTEYTPAQASAVANLPLPAVHKLIERRLIRPRRLRTGHSIQRMLSREQVLYLRLEAEGVRLLPIITRRAIAKKIES
Ga0210409_116903731	3300021559	Soil	METTEYTPAQASAVANLPLPAVHKLIERRLIRPRRLRTGHSIQRMLTREQVLYLRLEAEG
Ga0224516_10153841	3300023232	Soil	MKNRAYTPAQASAVTELPLKAVHKLIEGHLIRPRRRRVGQETQRFLSAEQLIYLKLEAEGVRLLPMVERRK
Ga0208935_10262761	3300025414	Peatland	MGAIEYTPAQASALANLPLPAVHKLIERRLIRPRRMRTGRSVQRMLSREQVLYVRLEA
Ga0208691_10628141	3300025612	Peatland	MGAIEYTPAQASALANLPLPAVHKLIERRLIRPRRMRTGRSVQRMLSREQVLYLRLEA
Ga0207663_108572831	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MEIREYTPAQASVLANLPLPAVHKVIERRLIRPRRLRTGRVIQRMLNRQQVLYLRLEAEGVRLLPISA
Ga0209438_10509831	3300026285	Grasslands Soil	MNTTEWTPAQASAVTNLPLPAVHKLMERRLIRPRRLRTVRSIQRMLNHGQVLYLRLEAEGVR
Ga0179587_105467452	3300026557	Vadose Zone Soil	MNAPEYTPAQASAVANLPLPAVHKLIERRLIRPRRRRTGRSIQRMLSREQVLYLRLEAEGVRLLPILT
Ga0179587_109780811	3300026557	Vadose Zone Soil	MKYTAAEASAVTNLPLRSVHKLIERRLVRPRRLRTGTSVQRLLSFEQLVYLRL
Ga0207777_10063173	3300027330	Tropical Forest Soil	MQTIEFTPAQASAVANLPLRTVHKLIERRLIRPRLRRIGRSLQRMLTREQLLYLRLEANG
Ga0209004_10956032	3300027376	Forest Soil	METREYTPAQASVLANLPLPAVHKVIERRLIRPRRLRAGRSVQRMLNWQQVLY
Ga0209118_12247181	3300027674	Forest Soil	METIEYTPAQASAVANLPLPAVHKLIERRLIRPRRLRTGRSIQRMLSREQVLYLRLEAEGVRLLPLAARRAIAKKIESS
Ga0209530_12283331	3300027692	Forest Soil	MNTTEYTPAQASAVTNLPLPAVHKLIERRLIRPRRLRTGRSIQRMLSRGQVLYLRLEAEGVRLLP
Ga0209139_101656071	3300027795	Bog Forest Soil	MSTAEYTPAQAAAVANLPLPAVHKLIERRLIRPRRLRTGRSIQRMLSRGQVLYLRLEAEGVRLLPLAARRAIARKIESSPEVDAVVLT
Ga0209166_104700861	3300027857	Surface Soil	METTEYTPAQASAVANLSLPAVHKLIERRLIRPRRLRAGRSIQRMLSREQVLYLRL
Ga0209169_103302252	3300027879	Soil	MNDAVYTPAQASAVADLPLKAVHKLIDGRLIRPRRMRVGREIQRFLSQGQLVYLRLEAEG
Ga0209068_102979321	3300027894	Watersheds	METTEYTPAQASAVANLPLPAVHKLIERRLIRPRRLRTGRSIQRMLSRAQVLYLRLEAEGVRLLPIAARRA
Ga0302144_102989612	3300028560	Bog	MQIIEYTPAQASAVANLPLPAVHKLIERRLIRPRRLRNGRSIQRMLSREQVL
Ga0302219_102784083	3300028747	Palsa	MTEDSFTPAQASAVTKLPLKAVHKLIDGRIIHPRRTRRGSETQRLLS
Ga0308309_113486081	3300028906	Soil	MEWALQNILRHRLQHANLPLPAVHKLIERRLIQPRRLRTGRSVQRMLTRGQVLYLRLEAEGVRLLPLVSRRAIAKQIESSPEIDAVVLREV
Ga0222749_100049861	3300029636	Soil	MGTTEYTPAQASAVANLPLPAVHKLIERGLIRPRRLRTGRSVQRMLSRGQVLYLRLEAEGVRLLPLASR
Ga0246001_10123341	3300029889	Peat	MDTIEYTPAQASAVANLPLPAVHKLIERRLIRPRRLRTGRSIQRMLSRAQVLY
Ga0311359_105158431	3300029914	Bog	MLARTYTPAQASAVANLPLKAVHKLIDGRLIRPGRSRVGQKVQRFLTEEQVIYLRLEAEGVRLLPLATR
Ga0311363_109155362	3300029922	Fen	MDVLEFTPAQASALANLPLPAVHKVIERRLIRPRRLRTGHSIQRMLSREQVLYLRLEAEGVRLLPLTARRAIAKKIESFPG
Ga0311363_111942461	3300029922	Fen	MDAIEFTPAQASALANLPLPAVHKLIERRLIRPRRLRTGRVIQRMLSREQVLYLRLEAEGVRLLPIASRRAIAKQIESSPGIDAVVLT
Ga0302270_102969151	3300030011	Bog	MLARTYTPAQASAVANLPLKAVHKLIDGRLIRPGRSRVGQKVQRFLTEEQVIYLRLEAEGVRLL
Ga0302282_12765792	3300030045	Fen	MQIIEYTPAQASAVANLPLPAVHKLIERRLIRPRRLRNGRSIQRMLSREQVLYLRLEAEGVRLLPMAARR
Ga0311372_115813202	3300030520	Palsa	MKARTYTPAQASAVANLPLKAVHKLIDGHLIRPRRQHVGRSVQRFLSEEQVVYL
Ga0311372_118538472	3300030520	Palsa	MTSDGFTPAQASAVSALSLKAVHKLIDGHLIRPRRMRVGGKTQRRLSQEQLVYLRL
Ga0311355_118192641	3300030580	Palsa	MQALGYTPAQASAIANLPLPAVHKLIERRLIRPRRVRTGRSIQRMLTREQVL
Ga0265746_10404521	3300030815	Soil	MNDAVYTPAQASAVADLPLKAVHKLIDGRLIRPRRMRVGREIQRFLSQDQLVYLRLEAEGVRLLPLATRREVAKAVESSPGIDMVCLSEGS
Ga0073994_116861451	3300030991	Soil	MEYTPAQASAVANLPLPAVHKLIERRLIRPRRLRTGRSVQRMLTREQVLYLRLEAEGVRLLPIAARRAIAKKIE
Ga0265760_101300883	3300031090	Soil	METTEYTPAQASAVANLPLPAVHKLIERRLIRPRRLRTGRSIQRMLSREQVLYLRLEAEG
Ga0302325_105636031	3300031234	Palsa	MNDVVYTPAQASAVADLPLKAVHKLIDGRLIRPRRMRVGREIQRFLSQGQLVYLRLEAEGVRLLPLATRREVAKAVENSPDIDMVCLSEG
Ga0302325_114953651	3300031234	Palsa	MNDDVYTPAQASAVADLPLKAVHKLIDGRLIRPRRMRVGREIQRFLSHDQLVYLRLEAEGVRLLPLATRREVAKAV
Ga0302324_1026765471	3300031236	Palsa	MTSDGFTPAQASAVSALSLKAVHKLIDGHLIRPRRMRVGGKTQRRLSQDQLVYLRLEAEGVRL
Ga0307477_111650561	3300031753	Hardwood Forest Soil	MEATEYTPAQASAVANLPLPAVHKLIERRLIRPRRLRTGRSIQRMLSREQVLYLRLEAEGVRLLPIAARRAIARKIESSPEID
Ga0310909_100775244	3300031947	Soil	METIEFTPAQASAVANLPLRTVHKLIERRLIRPRLRRIGRSFQRMLTREQLLYLRLEAKGVRLLPIAARRSIAKKIEKSPE
Ga0307479_100210641	3300031962	Hardwood Forest Soil	METVEYTPAQAAVVANLPLPAVHKLIERRLIRPRRQRTGRSIQRMLSREQVLYLRLEAEGVRLLPL
Ga0307479_115108981	3300031962	Hardwood Forest Soil	METVEYTPAQAAVVANLPLPAVHKVIERRLIRPRRQRTGRSIQRMLSREQVLYLRLEAEGVRLLPL
Ga0307479_116333271	3300031962	Hardwood Forest Soil	MEIREYTPAQASVLANLPLPAVHKVIERRLIRPRRLRAGRSIQRMLNWQQVLYLRLEAEGVRLLPVS
Ga0306922_101048483	3300032001	Soil	MQTIEFTPAQASAVANLPLRTVHKLIERRLIRPRLRRIGRSLQRMLTREQLLYLRLEANGVRLLPIAARRSIAKKIEKSPEI
Ga0318514_101987591	3300032066	Soil	MERIEFTPAQASAVANLPLRTVHKLIERRLIRPRLRRIGRSLQRMLTREQLLFLGLEAKGVRLLPIATRRS
Ga0335080_117309651	3300032828	Soil	METLEFTPAQASAVANLPLRTVHKLIERRLIRPRLRRIGRSLQRMLTREQLLYLRLE
Ga0316212_10591281	3300033547	Roots	MNAIEYTPAQASVLANLPLPAVHKLIERRLIRPRRLRSGRSIQRMLSREQVLYLRLEAEGVRLLPMASRRAIAKKIE
Ga0316212_10668702	3300033547	Roots	MAALEYTPAQASAIANLPLPAVHKLIERRLIRPRRVRTGRSIQRMLTREQVLYLRLEAQGVRLLPMSARRAIARKLE
Ga0334854_066242_678_860	3300033829	Soil	MDTTEYTPAQASAVANLPLPAVHKLIERRLIRPRRLRTGRSIQRMLSRGQVLYLRLEAEG
Ga0370483_0307943_293_547	3300034124	Untreated Peat Soil	MNDGLYTPAQASAVAGLPLKTVHKLIDGRLIRPRRMLVGRETQRLLSQDQLVYLRLEAEGVRLLPLAIRREVARAIENSPNIDIV
Ga0370492_0188741_1_228	3300034282	Untreated Peat Soil	MDAIEFTPAQASALANLPLPAVHKLIERRLIRPRRLRTGRVIQRMLSREQVLYLRLEAEGVRLLPIASRRAIAKQI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086704

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences