Metagenome / Metatranscriptome Family F086632

Overview

Basic Information

• Family ID: F086632
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 110
• Average Sequence Length: 50 residues
• Representative Sequence: MIIKIDRDILVGCYEVLNKYFIVQEFTSVHKITTKEKKLYNAVAKLLEEKE
• Number of Associated Samples: 83
• Number of Associated Scaffolds: 110

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 51.06 %
• % of genes near scaffold ends (potentially truncated): 7.27 %
• % of genes from short scaffolds (< 2000 bps): 27.27 %
• Associated GOLD sequencing projects: 77
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (84.545 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (25.455 % of family members)
• Environment Ontology (ENVO): Unclassified (77.273 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline) (75.455 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 46.84%
  β-sheet: 0.00%
  Coil/Unstructured: 53.16%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF01381	HTH_3	10.91
PF12705	PDDEXK_1	1.82
PF01930	Cas_Cas4	0.91
PF03237	Terminase_6N	0.91
PF01832	Glucosaminidase	0.91
PF16784	HNHc_6	0.91
PF06147	DUF968	0.91

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG1468	CRISPR/Cas system-associated exonuclease Cas4, RecB family	Defense mechanisms [V]	0.91

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.55 %
All Organisms	root	All Organisms	15.45 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.55 %
Viruses	superkingdom	All Organisms → Viruses	10.91 %
cellular organisms	root	All Organisms → cellular organisms	4.55 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.18 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.55 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	2.73 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.18 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	2.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.82 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.18 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	2.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.82 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.18 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2.73 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.82 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.18 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	1.82 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.82 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	0.91 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.18 %
Autographiviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae	1.82 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.82 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.91 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.18 %
unclassified Autographiviridae	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → unclassified Autographiviridae	1.82 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.82 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.91 %

Level 10

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.18 %
Pelagibacter phage HTVC025P	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → unclassified Autographiviridae → Pelagibacter phage HTVC025P	1.82 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.82 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.91 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300002195|metazooDRAFT_1231111	Not Available	1499
3300002835|B570J40625_100013546	Not Available	14476
3300003277|JGI25908J49247_10012178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2658
3300003394|JGI25907J50239_1007597	All Organisms → Viruses → Predicted Viral	2583
3300003411|JGI25911J50253_10049463	All Organisms → Viruses → Predicted Viral	1443
3300005583|Ga0049085_10081540	All Organisms → cellular organisms → Bacteria	1129
3300005583|Ga0049085_10174043	Not Available	720
3300005583|Ga0049085_10293616	Not Available	528
3300005805|Ga0079957_1065321	Not Available	2131
3300006014|Ga0073919_1026036	Not Available	551
3300007708|Ga0102859_1145013	Not Available	695
3300008114|Ga0114347_1060232	All Organisms → Viruses → Predicted Viral	1949
3300008117|Ga0114351_1077584	All Organisms → Viruses → Predicted Viral	3115
3300009026|Ga0102829_1126758	Not Available	808
3300009026|Ga0102829_1300896	Not Available	534
3300009068|Ga0114973_10354068	Not Available	774
3300009158|Ga0114977_10012449	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → unclassified Autographiviridae → Pelagibacter phage HTVC025P	5383
3300009158|Ga0114977_10160943	All Organisms → Viruses → Predicted Viral	1332
3300011011|Ga0139556_1003560	All Organisms → Viruses → Predicted Viral	2320
3300012006|Ga0119955_1007346	Not Available	4412
3300013004|Ga0164293_10224233	Not Available	1343
3300014819|Ga0119954_1000909	Not Available	10158
3300017716|Ga0181350_1040307	Not Available	1264
3300017777|Ga0181357_1116570	Not Available	1004
3300017777|Ga0181357_1139064	Not Available	901
3300019784|Ga0181359_1134962	Not Available	865
3300020141|Ga0211732_1343332	Not Available	1833
3300020159|Ga0211734_11090167	All Organisms → Viruses → Predicted Viral	2110
3300020161|Ga0211726_10781543	Not Available	660
3300020172|Ga0211729_11269950	All Organisms → Viruses → Predicted Viral	1263
3300020506|Ga0208091_1006178	Not Available	1592
3300020543|Ga0208089_1027064	Not Available	808
3300020556|Ga0208486_1001262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4836
3300021962|Ga0222713_10801237	Not Available	526
3300022407|Ga0181351_1107936	Not Available	1064
3300022752|Ga0214917_10032784	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3858
3300022752|Ga0214917_10283089	Not Available	749
3300023174|Ga0214921_10018411	All Organisms → cellular organisms → Bacteria	7653
3300024346|Ga0244775_10374918	Not Available	1172
3300027627|Ga0208942_1000724	All Organisms → cellular organisms → Bacteria	12784
3300027733|Ga0209297_1007567	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → unclassified Autographiviridae → Pelagibacter phage HTVC025P	5436
3300027733|Ga0209297_1209677	Not Available	767
3300027974|Ga0209299_1019401	Not Available	3082
3300031707|Ga0315291_10460583	All Organisms → Viruses → Predicted Viral	1191
3300031758|Ga0315907_10085509	Not Available	2717
3300031952|Ga0315294_11448850	Not Available	540
3300033233|Ga0334722_10639281	Not Available	758

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.18%
Terrestrial	Environmental → Terrestrial	1.82%

Category

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	88.18%
Marine	Environmental → Aquatic → Marine	10.00%
Soil	Environmental → Terrestrial → Soil	1.82%

Type

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	45.45%
Lake	Environmental → Aquatic → Freshwater → Lake	40.00%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	6.36%
Unclassified	Environmental → Aquatic → Marine → Unclassified	3.64%
Sand	Environmental → Terrestrial → Soil → Sand	1.82%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.91%
Ice	Environmental → Aquatic → Freshwater → Ice	0.91%
Creek	Environmental → Aquatic → Freshwater → Creek	0.91%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	41.82%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	32.73%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	7.27%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	6.36%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	3.64%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	3.64%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.82%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.91%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.91%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	0.91%

Habitat

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	25.45%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	12.73%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	12.73%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	10.00%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	7.27%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	6.36%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	6.36%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	3.64%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	2.73%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	2.73%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	2.73%
Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Sand	1.82%
Lake	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Lake	0.91%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	0.91%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.91%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater	0.91%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	0.91%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.91%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300002195	Freshwater microbial communities from San Paulo Zoo lake, Brazil - AUG 2013	Environmental
3300002294	Freshwater microbial communities from Lake Mendota, WI - 17MAY2012 deep hole epilimnion	Environmental
3300002296	Freshwater microbial communities from Lake Mendota, WI - 02JUN2012 deep hole epilimnion	Environmental
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental
3300003388	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN	Environmental
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental
3300003394	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN	Environmental
3300003411	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD	Environmental
3300003412	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD	Environmental
3300004793	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN (Metagenome Metatranscriptome)	Environmental
3300005580	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF	Environmental
3300005583	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF	Environmental
3300005584	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF	Environmental
3300005585	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ON33MSRF	Environmental
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental
3300006014	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T3_25-Nov-14	Environmental
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental
3300007708	Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02	Environmental
3300008114	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-C-NA	Environmental
3300008117	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-C-NA	Environmental
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental
3300008999	Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.545	Environmental
3300009026	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575	Environmental
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental
3300011010	Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Surface Ice	Environmental
3300011011	Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Top - Depth 1m	Environmental
3300011995	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 880 - Top - Depth 1m	Environmental
3300012006	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1101B	Environmental
3300012017	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Top - Depth 1m	Environmental
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental
3300014819	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1011A	Environmental
3300017701	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.S.N	Environmental
3300017716	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.D	Environmental
3300017722	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.N	Environmental
3300017723	Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.N	Environmental
3300017736	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.N	Environmental
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental
3300017778	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D	Environmental
3300017780	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.N	Environmental
3300017785	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N	Environmental
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental
3300020141	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1	Environmental
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental
3300020506	Freshwater microbial communities from Lake Mendota, WI - 26OCT2012 deep hole epilimnion (SPAdes)	Environmental
3300020543	Freshwater microbial communities from Lake Mendota, WI - 29JUN2012 deep hole epilimnion (SPAdes)	Environmental
3300020556	Freshwater microbial communities from Lake Mendota, WI - 03AUG2012 deep hole epilimnion (SPAdes)	Environmental
3300020557	Freshwater microbial communities from Lake Mendota, WI - 15JUN2012 deep hole epilimnion (SPAdes)	Environmental
3300021956	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 29-17 MG	Environmental
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental
3300022190	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N	Environmental
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental
3300022752	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BB	Environmental
3300023174	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505	Environmental
3300023179	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510	Environmental
3300024346	Whole water sample coassembly	Environmental
3300026931	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T2_23-Sept-14 (SPAdes)	Environmental
3300027320	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575 (SPAdes)	Environmental
3300027586	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF (SPAdes)	Environmental
3300027627	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF (SPAdes)	Environmental
3300027631	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 (SPAdes)	Environmental
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental
3300027732	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (SPAdes)	Environmental
3300027733	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)	Environmental
3300027744	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN (SPAdes)	Environmental
3300027974	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG (SPAdes)	Environmental
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental
3300031885	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_36	Environmental
3300031952	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40	Environmental
3300032046	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_40	Environmental
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental
3300034117	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jun2014-rr0124	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
metazooDRAFT_12311115	3300002195	Lake	MKKSVDIDILKGCFEILKKYFIVQEFTSVYKITKQEKMVYNAIAKLVEGKQNVK*
B570J29584_10134991	3300002294	Freshwater	MIIKIDRDILVGCYEVLNKYFIVQEFTSVHKITPKEKKLYNAVAKLLEEKE*TQIKKS*
B570J29587_10149013	3300002296	Freshwater	ILIPRLVLEDLYGILKKYFIVQEFTSVHKITTKEKKLYNEVAKLLEENK*
B570J40625_1000135467	3300002835	Freshwater	MIIKIDRDILVGCYEVLNKYFIVQEFTSVHKITPKEKKLYNAVAKLLEEKE*
JGI25908J49247_100121787	3300003277	Freshwater Lake	MIIKIDRDILKGCYEILKKYFIVQEFTSVNKITTKEKKLYNEVAKLLEEKE*
JGI25910J50241_101983991	3300003388	Freshwater Lake	MKILIPRLVLEDLYGILKKYFIVQEFTSVHKITTKEKKLYNEVAKLLE
JGI25909J50240_10765284	3300003393	Freshwater Lake	MKILIPRLVLEDLYGILNKYFIVQEFTSVHKITTKRKKLYNAVAKLLEEKE*
JGI25907J50239_10075971	3300003394	Freshwater Lake	MIXKIDRDILVGCYEVLNKYFIVQEFTSVHKITPKEKKLYNAVAKLLEEKE*
JGI25911J50253_100494632	3300003411	Freshwater Lake	MIXKIDRDILVGCYXVLNKYFIVQEFTSVHKITPKEKKLYNAVAKLLEEKE*
JGI25912J50252_100837374	3300003412	Freshwater Lake	MIIKIDRDILVGCYXVLNKYFIVQEFTSVHKITPKEKKLYNAVAKLLEEKE*
Ga0007760_112579121	3300004793	Freshwater Lake	MIIKIDRDILVGCYEVLNKYFIVQEFTSVHKITTKEKKLYNEVAKLLEENK*
Ga0049083_101248953	3300005580	Freshwater Lentic	MNIKIPRLVLEDLYAILKKYFIVQEFTSVDKITTKEKKLYNAVAKLLEEKE*
Ga0049083_101833192	3300005580	Freshwater Lentic	MKILIPRLVLEDLYGILKKYFIVQEFTSVHKITTKEKKLYNEVAKLLEENK*
Ga0049085_100815402	3300005583	Freshwater Lentic	MKILIPRLVLEDLYRILKKYFIVQEFTSVHKITTKEKKLYNEVAKLLEENK*
Ga0049085_101740433	3300005583	Freshwater Lentic	MKVLIDRDILKGCYEILKKYFITQEFTSVHKITRFEKNIYNEIAKILDKKND*
Ga0049085_101776632	3300005583	Freshwater Lentic	MKVLINKDTLFGCYEILKKYFIVQEFTSANKITRFEKNIYNEVAKILEKKNKNND*
Ga0049085_102187462	3300005583	Freshwater Lentic	MIIKIDRDILVGCYEVLNKYFIVQEFTSVHKITTKEKKLYNAVAKLLEVKHD*
Ga0049085_102936161	3300005583	Freshwater Lentic	MNIKIPRLVLEDLYAILKKYFIVQEFTSVHKITTKEKK
Ga0049085_102944512	3300005583	Freshwater Lentic	MKLLIPRLVLEDLYEILKKYFIVQEFTSINKITTKEKKLYNEVAKLLEKKND*
Ga0049082_101116772	3300005584	Freshwater Lentic	MIIKIDRDILVGCYEVLNKYFIVQEFTSVHKITTKEKKLYNAVAKLLEEKE*
Ga0049084_101749844	3300005585	Freshwater Lentic	MNIKIPRLVLEDLYAILKKYFIVQEFTSVNKITPKEKKLYNAVAKLL
Ga0079957_10653217	3300005805	Lake	MKKSVDIDILEGIFEILKKYFIVQEFTSVYKITRKEKEIYNAVAKLVEGKNNVKQR*
Ga0073919_10260363	3300006014	Sand	MKILIPRLVLEGLYGILKKYFIVQEFTSVHKITTKEKK
Ga0102828_10525282	3300007559	Estuarine	MKVLINKDTLFGCYEILKKYFIVQEFTSANKITRFEKNIYNEVAKILEKKNKKND*
Ga0102859_11450134	3300007708	Estuarine	MIIKIDRDILMGCYEVLNKYFIVQEFTSVNKITAKEKKLYNAVAKLLEVKE*
Ga0114347_10602323	3300008114	Freshwater, Plankton	MIIKIDRDILVGCYEVLNKYFIVQEFTSVHKITTKKKKLYNAVAKLLEEK*
Ga0114351_10775844	3300008117	Freshwater, Plankton	MIIKIDRDILVGCYEVLNKYFIVQEFTSVHKITTKEKKLYNAVAKLLEEK*
Ga0114363_10683321	3300008266	Freshwater, Plankton	KIDRDILVGCYEVLNKYFIVQEFTSVHKITTKEKKLYNAVAKLLEEK*
Ga0102816_12843551	3300008999	Estuarine	MKVLIDRDILKGCYEILKKYFIVKEFTSANKITRFEKNIYNEVAKILEKKNKKND*
Ga0102829_11267581	3300009026	Estuarine	MTVKIDRDILKGCYEILKKYFITQEFTSVHKITTKEKKLYNEVAKLLEENK*
Ga0102829_12228043	3300009026	Estuarine	KIDRDILKGCYEILKKYFIVQEFTSVNKITRFEKNIYNEVAKILDKKND*
Ga0102829_13008963	3300009026	Estuarine	IIKIDRDILVGCYEVLNKYFIVQEFTSVHKITTKEKKLYNAVAKLLEEKE*
Ga0114973_103540684	3300009068	Freshwater Lake	MKVLIDSDILKGCYEILKKYFITQEFTSVHKITRFEKNIYNEIAKILDKKND*
Ga0114977_1001244914	3300009158	Freshwater Lake	MKVLIDSDILKGCYEILKKYFITQEFTSVHKITRFEKNIYNEIDKILDKKND*
Ga0114977_101609433	3300009158	Freshwater Lake	MRVLINKDILVGCYEILKKYFITQEFTSVHKITTKEKKLYNEVAKLLEEKQ*
Ga0114974_102741872	3300009183	Freshwater Lake	MKVLIDRDILKGCYEILKRYFITQEFTSVHKITRFEKNIYNEIAKILDKKND*
Ga0139557_10763041	3300011010	Freshwater	MKILIPRLVLEDLYGILKKYFIVQEFTSVHKITTKEKKLYNE
Ga0139556_10035606	3300011011	Freshwater	MIIKIDRDILVGCYEVLNKYFIVQEFTSVHKITTKEKKLYNAVAKLLEVKE*
Ga0153800_10407561	3300011995	Freshwater	VLEDLYSILKKYFIVQEFTSVHKITTKEKKLYNEVAKLLEENK*
Ga0119955_100734612	3300012006	Freshwater	MKKSVDIGILKGCFDILKKYFIVQEFTSVYKITESEKELYNKLAKIIEGKNVK*
Ga0153801_10096664	3300012017	Freshwater	MIIKIDRDILVGCYEVLNKYFIVQEFTSVHKITPKEKKLYNAVAKLLEENK*
Ga0164293_101056164	3300013004	Freshwater	MIIKIDRDILVGCYEVLNKYFIVQEFTSVHKITLKEKKLYNAVAKLLEEKE*
Ga0164293_102242335	3300013004	Freshwater	MIVKIDRDILKGCYEILKKYFITQEFTSVHKITRFEKNIYNEVAKILDKKND*
Ga0164293_104069771	3300013004	Freshwater	MKILIPRLVLEDLYGILKKYFIVQEFTSVHKITTKEKKLYNAVAKLLEEKE*
Ga0164292_104144741	3300013005	Freshwater	DILVGCYEVLNKYFIVQEFTSVHKITPKEKKLYNAVAKLLEEKE*
Ga0119954_100090913	3300014819	Freshwater	MKKTVDIGILKGCFEILKKYFIVQEFTSVYKITESEKQLYNKLAKIVEGKNVK*
Ga0181364_10609433	3300017701	Freshwater Lake	MNIKIPRLVLEDLYAILKKYFIVQEFTSVDKITTKEKKLYNAVAKLLEEKE
Ga0181350_10403076	3300017716	Freshwater Lake	MNIKVPRLVLEDLYAILKKYFIVQEFTSVDKITTKEKKLYNAVAKLLEEKE
Ga0181350_10485784	3300017716	Freshwater Lake	MKILIPRLVLEDLYGILKKYFIVQEFTSVHKITTKEKKLYNEVAKLLEEKE
Ga0181347_10518476	3300017722	Freshwater Lake	MNIKIPRLVLEDLYAILKKYFIVQEFTSVDKITTKEKKLYNVVAKLLEEKE
Ga0181347_10688381	3300017722	Freshwater Lake	MIIKIDRDILVGCYEVLNKYFIVQEFTSVHKITPK
Ga0181362_10497513	3300017723	Freshwater Lake	MKILIPRLVLEDLYGILKKYFIVQEFTSVHKITTKEKKLY
Ga0181365_10384101	3300017736	Freshwater Lake	MIVKIDRDILVGCYEVLNKYFIVQEFTSVHKITTKEKKLYNEVAKLLEENK
Ga0181365_10385481	3300017736	Freshwater Lake	MNIKIPRLVLEDLYAILKKYFIVQEFTSVNKITTKEKTLPFSP
Ga0181365_10386334	3300017736	Freshwater Lake	MKILIPRLVLEDLYGILKKYFIVQEFTSVHKITTKEKKLYNEVAKLLEENKXLNN
Ga0181357_11165705	3300017777	Freshwater Lake	PRLVLKDLYAILKKYFIVQEFTSVHKITTKEKRLYNEVAKLLEVKE
Ga0181357_11390643	3300017777	Freshwater Lake	MKILIPRLVLEDLYAILKKYFIVQEFTSVNKITTKEKKLYNAVAKLLEEKE
Ga0181357_12119093	3300017777	Freshwater Lake	MNIKIPRLVLEDLYAILKKYFIVQEFTSAHKITTKEKRLYNKVAKLLELKE
Ga0181349_11980662	3300017778	Freshwater Lake	MIIKIDRDILVGCYEVLNKYFIVQEFTSVHKITQKEKKLYNAVAKLLEEKE
Ga0181346_11025741	3300017780	Freshwater Lake	MNIKIPRLVLEDLYAILKKYFIVQEFTSVDKITTKEKKLYNVVAKLLEEKEXTKKKIN
Ga0181355_12976822	3300017785	Freshwater Lake	MNIKIPRLVLEDLYGILKKYFIVQEFTSVHKITTKEKKLYNAVAKLLEEKE
Ga0181359_10970401	3300019784	Freshwater Lake	MIIKIDRDILVGCYEVLNKYFIVQEFTSVHKITPKE
Ga0181359_11349621	3300019784	Freshwater Lake	MKILIPRLVLEDLYGILKKYFIVQEFTSVHKITTKEKKLYNEVAKLLEENK
Ga0211732_13433323	3300020141	Freshwater	MKILIPRLVLEGLYEILKKYFIVQEFTSVHKITTKEKKLYNEVAKLLEEKQ
Ga0211734_101480291	3300020159	Freshwater	MIIKIDRDILVGCYEVLNKYFIVQEFTSVHKITPKEKKLYNAVAKLLEENND
Ga0211734_106814021	3300020159	Freshwater	MIIKIDRDILVGCYEVLNKYFIVQEFTSVHKITPKEKKLYNAV
Ga0211734_110901672	3300020159	Freshwater	MKILIPRLVLEGLYEILKKYFIVQEFTSVHKITTKEKKLYNEVAKLLEEKK
Ga0211726_107815433	3300020161	Freshwater	MNIKIPRDTLESIFSILKKYFIVQEFTSVHKITSKEKKLYNEVAKLLEEKK
Ga0211729_112699501	3300020172	Freshwater	MIIKIDRDILVGCYEVLNKYFIVQEFTSVHKITPKEKKLYNAVAKLLE
Ga0208091_10061784	3300020506	Freshwater	MIIKIDRDILVGCYEVLNKYFIVQEFTSVHKITPKEKKLYNAVAKLLEEKE
Ga0208089_10270643	3300020543	Freshwater	MIIKIDRDILVGCYEVLNKYFIVQEFTSVHKITTKEKKLYNAVAKLLEENK
Ga0208486_100126212	3300020556	Freshwater	MIIKIDRDILVGCYEVLNKYFIVQEFTSVHKITTKEKKLYNEVAKLLEENK
Ga0208231_10034323	3300020557	Freshwater	MIIKIDRDILVGCYEVLNKYFIVQEFTSVHKITPKEKKLYNAVAKLLEVKE
Ga0213922_10278014	3300021956	Freshwater	MKVLVDKDILIGCYEILKKYYIVQEFTSVYKISKKEKMIYNAIAKIVEGKKNV
Ga0222713_108012372	3300021962	Estuarine Water	MIIKIDRDILVGCYEVLNKYFIVQEFTSVHKITTKEKKLYNAVAKLLEAKHD
Ga0181354_11978771	3300022190	Freshwater Lake	MIIKIDRDILKGCYEILKKYFIVQEFTSVNKITTKEKKLYNEVAKLLEEKE
Ga0181351_11079364	3300022407	Freshwater Lake	MMIKISRDTLEAIFSILKKYFIVQEFTSVHKITTKEKRLYNEVAKLLEVKE
Ga0214917_100327848	3300022752	Freshwater	MKVLVDKDILIGCYEILKKYYIVQEFTSVYKISRKEKMIYNAIAKIVEGKKNV
Ga0214917_102830892	3300022752	Freshwater	MKKSVDIGILKGCFEILKKYFIVQEFTSVYKITESEKQLYNKLAKIIEGKNVK
Ga0214921_1001841120	3300023174	Freshwater	MKKTVDIGILKGCFEILKKYFIVQEFTSVYKITESEKQLYNKLAKIIEGKNVK
Ga0214921_101889272	3300023174	Freshwater	MKKSVDIGILKGCFDILKKYFIVQEFTSVYKITESEKELYNKLAKIIEGKNVK
Ga0214923_101381963	3300023179	Freshwater	MKKSVDIDILEGIFEILKKYFIVQEFTSVYKITRKEKEIYNAVAKLVEGKKNVKQR
Ga0244775_103749183	3300024346	Estuarine	MKVLIDRDILKGCYEILKKYFIVQEFTSANKITRFEKNIYNEVAKILEKKNKKND
Ga0244775_110180241	3300024346	Estuarine	MIIKIDRDILVGCYEVLNKYFIVQEFTSVHKITTKEKKLYNAVAKLLEEKE
Ga0209850_10181563	3300026931	Sand	MIIKIDRDILVGCYEVLNKYFIVQEFTSVHKITPKEKKLYNAVAKLLEENK
Ga0208923_10951414	3300027320	Estuarine	ILNGCYEILKKYFIVQEFTSVNKITRFEKNIYNEVAKILDKKND
Ga0208966_11977462	3300027586	Freshwater Lentic	MIIKIDRDILVGCYEVLNKYFIVQEFTSVHKITTKEKKLYNAVAKLLEVKHD
Ga0208942_100072426	3300027627	Freshwater Lentic	MKILIPRLVLEDLYRILKKYFIVQEFTSVHKITTKEKKLYNEVAKLLEENK
Ga0208942_11212382	3300027627	Freshwater Lentic	MKVLINKDTLFGCYEILKKYFIVQEFTSANKITRFEKNIYNEVAKILEKKNKNND
Ga0208133_10800652	3300027631	Estuarine	MIIKIDRDILVGCYEVLNKYFIVQEFTSVHKITTKEKKLYNAVAKLLEVKE
Ga0208975_11863731	3300027659	Freshwater Lentic	MIVKIDRDILKGCYEILKKYFIVQEFTSVNKITTKEKKLYNEVAKLLEEKE
Ga0209442_12752481	3300027732	Freshwater Lake	MIIKIDRDILVGCYEVLNKYFIVQEFTSVHKITPKEKKLYNAVAKLLEEKEXTKKKI
Ga0209297_10075674	3300027733	Freshwater Lake	MKVLIDSDILKGCYEILKKYFITQEFTSVHKITRFEKNIYNEIAKILDKKND
Ga0209297_12096773	3300027733	Freshwater Lake	MRVLINKDILVGCYEILKKYFITQEFTSVHKITTKEKKLYNEVAKLLEEKQ
Ga0209355_10623543	3300027744	Freshwater Lake	MIVKIDRDILKGCYEILKKYFITQEFTSVHKITRFEKNIYNEVAKILDKKND
Ga0209299_10194011	3300027974	Freshwater Lake	ILKGCYEILKKYFITQEFTSVHKITRFEKNIYNEIAKILDKKND
Ga0315291_104605835	3300031707	Sediment	MKILIPRLVLEDLYGILKKYFIVQEFTSVHKITTKEKKLYNEVAKLLEEKQ
Ga0315291_113422543	3300031707	Sediment	MIVKIDRDILKGCYEILKKYFIVQEFTSVNKITRFEKNIYNEVAKILDKKND
Ga0315907_100855097	3300031758	Freshwater	MIIKIDRDILVGCYEVLNKYFIVQEFTSVHKITTKEKKLYNAVAKLLEEK
Ga0315285_108900221	3300031885	Sediment	MIIKVDRAILMGCYEVLNKYFIVQEFTSVHKITTKEKKLYNAVAKLLEEKE
Ga0315294_114488502	3300031952	Sediment	MIIKVDRDILMGCYEVLNKYFIVQEFTSVHKITTKEKKLYNAVAKLLEEKE
Ga0315289_108913241	3300032046	Sediment	MKILIPRLVLEGLYAILKKYFIVQEFTSVHKITTKEKKLYNDVAKLLEEKQ
Ga0315284_105515792	3300032053	Sediment	MIVKIDRDILKGCYEILKKYFITQEFTSVHKITTKEKKLYNEVAKLLEEKK
Ga0315286_112150592	3300032342	Sediment	MIVKIDRDILKGCYEILKKYFIVQEFTSVNKITRFEKNIYNEVSKILDKKND
Ga0334722_106392812	3300033233	Sediment	MKILIPRLVLEGLYEILKKYFIVQEFTSVHKITTKEKKLYNAVAKLLEVKE
Ga0334979_0465415_555_689	3300033996	Freshwater	MIIKIDRDILVGCYEVLNKYFIVQEFTSVHKITPKEKKLYNEVAK
Ga0334995_0291485_1_135	3300034062	Freshwater	MIIKIDRDILVGCYEVLNKYFIVQEFTSVHKITPKEKKLYNAVAK
Ga0334995_0504982_577_726	3300034062	Freshwater	IKIDRDILVGCYEVLNKYFIVQEFTSVHKITPKEKKLYNAVAKLLEEKE
Ga0335031_0715282_249_404	3300034104	Freshwater	MKILIPRLVLEDLYGILKKYFIVQEFTSVHKITTKEKKLYNAVAKLLEEKE
Ga0335033_0486181_1_126	3300034117	Freshwater	MKILIPRLVLEDLYGILKKYFIVQEFTSVHNITTKEKKLYNE