NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F086537

Metagenome / Metatranscriptome Family F086537

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F086537
Family Type Metagenome / Metatranscriptome
Number of Sequences 110
Average Sequence Length 132 residues
Representative Sequence MIDSGDGAGEQLAQWLKDAGRRAGLAALPAAAADSDETYNSPASLHRYLEELAGKPLRSHAEVLNYLGEVAGAQPQTHYMRERRRMVRELALIGLLALSYLHFYYWDVQLQIAALNSARVFIPAPPPAEKKA
Number of Associated Samples 98
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 72.73 %
% of genes near scaffold ends (potentially truncated) 31.82 %
% of genes from short scaffolds (< 2000 bps) 69.09 %
Associated GOLD sequencing projects 90
AlphaFold2 3D model prediction Yes
3D model pTM-score0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (87.273 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil
(35.455 % of family members)
Environment Ontology (ENVO) Unclassified
(51.818 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Subsurface (non-saline)
(50.000 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164
1C687J26623_100003374
2C687J26623_101962802
3Ga0055471_100581052
4Ga0055466_100134561
5Ga0055466_100597452
6Ga0055448_100414952
7Ga0055453_101138732
8Ga0055465_100241291
9Ga0055487_100462701
10Ga0055487_100666161
11Ga0055485_100322302
12Ga0055489_100140544
13Ga0074470_114801388
14Ga0075300_10559121
15Ga0105095_100092184
16Ga0105107_100025342
17Ga0105094_100592921
18Ga0105340_10042664
19Ga0137315_10004004
20Ga0137340_11095651
21Ga0137450_10118001
22Ga0137333_11257141
23Ga0137442_10044111
24Ga0137446_10832632
25Ga0137441_10953302
26Ga0137448_10009474
27Ga0137443_10034372
28Ga0137426_12631401
29Ga0137458_11041312
30Ga0137429_11215491
31Ga0137451_10177842
32Ga0137451_10556132
33Ga0137452_10346822
34Ga0137453_10083152
35Ga0137445_10322192
36Ga0137461_10959801
37Ga0137332_10416852
38Ga0137329_10567271
39Ga0137352_10520221
40Ga0137342_10125003
41Ga0137342_10177882
42Ga0137327_10974311
43Ga0137434_10379012
44Ga0137459_100035712
45Ga0075314_10322682
46Ga0075325_10011704
47Ga0075326_12788062
48Ga0075327_10497023
49Ga0075321_10002025
50Ga0075340_10013573
51Ga0075340_11232261
52Ga0075322_10324221
53Ga0180096_10337791
54Ga0180068_10275702
55Ga0180066_10006192
56Ga0180084_10243062
57Ga0180083_10139221
58Ga0180064_10714141
59Ga0180062_11014632
60Ga0180063_11560982
61Ga0180079_10065501
62Ga0180071_10113662
63Ga0180089_10019291
64Ga0180067_10382732
65Ga0187775_101689072
66Ga0184616_102003222
67Ga0184615_101932881
68Ga0184615_103047162
69Ga0184637_104906732
70Ga0184636_13334161
71Ga0184628_100002455
72Ga0184629_100986473
73Ga0184629_103707822
74Ga0210379_100044104
75Ga0210379_101866522
76Ga0210377_1000627610
77Ga0224497_102452872
78Ga0224500_100016434
79Ga0209108_101464933
80Ga0209640_100435444
81Ga0209640_101737553
82Ga0210061_10000055
83Ga0210096_10574982
84Ga0210115_10007434
85Ga0210066_10216612
86Ga0210116_10779401
87Ga0208144_10015453
88Ga0208293_10001502
89Ga0208289_10006022
90Ga0209703_10254151
91Ga0209592_10041624
92Ga0209078_12191761
93Ga0307281_100264813
94Ga0214473_123189661
95Ga0326597_102087792
96Ga0315910_100784332
97Ga0335085_1000602112
98Ga0335084_102305843
99Ga0364924_016491_957_1355
100Ga0364926_000833_2334_2732
101Ga0364928_0001780_2300_2698
102Ga0364928_0007984_698_1096
103Ga0364946_109217_232_618
104Ga0364945_0001730_4128_4526
105Ga0364942_0055304_1_390
106Ga0364942_0222116_223_615
107Ga0364931_0039489_691_1086
108Ga0364932_0052915_508_906
109Ga0370545_078549_126_521
110Ga0364936_026048_1_396
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 54.37%    β-sheet: 0.00%    Coil/Unstructured: 45.62%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090100110120130MIDSGDGAGEQLAQWLKDAGRRAGLAALPAAAADSDETYNSPASLHRYLEELAGKPLRSHAEVLNYLGEVAGAQPQTHYMRERRRMVRELALIGLLALSYLHFYYWDVQLQIAALNSARVFIPAPPPAEKKACytopl.Extracel.Sequenceα-helicesβ-strandsCoilSS Conf. scoreTM segmentsTopol. domains
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.24
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
87.3%12.7%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Freshwater Sediment
Groundwater Sediment
Natural And Restored Wetlands
Sediment
Soil
Sediment (Intertidal)
Groundwater Sediment
Soil
Soil
Soil
Soil
Natural And Restored Wetlands
Rice Paddy Soil
Tropical Peatland
Soil
Sediment
5.5%13.6%35.5%7.3%3.6%10.0%3.6%10.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
C687J26623_1000033743300002122SoilLGSDNQGDGEMLAQWLKEAGRRAQLEAQGEAVADGDDTYNSPASLHRYVEQLAGRKLQTHAEVLEFLKEVAGSQPRGHREHERRRMVREVALIVLLAISYLHFYYWEVQXEIAALNSVNVVIPAXEARPKRISS*
C687J26623_1019628023300002122SoilRRSQPRGHASAVERGDDTYNSPASLHKYLEELAHRKLQTHAEVLDYLREVAGSQAEAHAARERRRMVREIALLVLLAISYLHYYYWEVQLQIAALNSVSTFIPAKQARTAKRMI*
Ga0055471_1005810523300003987Natural And Restored WetlandsLSGNDEGGGELLAQWLKEAGRRAQSKGKASEGAASDADDTFNSPASLHRYLEELAGRKLQTHAEVLAFLKEVAGGQPQGHRDHERRRMVREVALIVLLAISYLHFYYWEVQLQIAALKGVPVLVPAPTAQPSKIRS*
Ga0055466_1001345613300003997Natural And Restored WetlandsLSGNDEGGGELLAQWLKEAGRRAQSKGKASEGAASDADDTFNSPASLHRYLEELAGRKLQTHAEVLAFLKEVAGGQPQGHRDHERRRMVREVALIALLAISYLHFYYWEVQLQIAALKGVPVLVPAPTAQPSKIRS*
Ga0055466_1005974523300003997Natural And Restored WetlandsLSGTDEGGGELLAQWLKEAGRRAQSRVKAEDGAAADADDTFNSPASLHRYLEELAGRKLQTHAEVLAFLKEVAGGQPAGHREHERRRMVREVALIILLAVSYLHFYYWEVQLQIAALKGVTVLVPTPAARPSKIRS*
Ga0055448_1004149523300004005Natural And Restored WetlandsVHAGLIREAALSDDETGSGELLTHWLKEAGRRAQSKAQAGDAADGDDTYNSPASLHRYLEELAGRKLQTHAQVLEFLKEAAGSQPQGYREHERRRMVREVVLIVVLALSYLHFYFWEVQLQIAALNSVNVFVPAPQSKTRKTQS*
Ga0055453_1011387323300004006Natural And Restored WetlandsLSGNDEGGGELLAQWLKEAGRRAQSQAKTHDDAAAEADDTFNSPASLHRYLEELAGRKLQTHAEVLAFLKEVAGGQPEGHREHERRRMVREVALIILLAVSYLHFYYWEVQLQIAALKGVTVLVPTPAARPSKIRS*
Ga0055465_1002412913300004013Natural And Restored WetlandsVLSGNDEGGGELLAQWLKEAGRRAQSKGKASEGAASDADDTFNSPASLHRYLEELAGRKLQTHAEVLAFLKEVAGGQPQGHRDHERRRMVREVALIALLAISYLHFYYWEVQLQIAALKGVPVLVPAPTAQPSKIRS*
Ga0055487_1004627013300004061Natural And Restored WetlandsMSEDGGGEQLAQWLKEAGRRTQAAKAPPATADGDESYNSPASLHHYLEELAGRKLESHAEVLRYLREVAGAQPEGLRAQERRRMVREVSLLVLLAISYLHFYYWEVQLQIAALQSVGVFIPAPPA
Ga0055487_1006661613300004061Natural And Restored WetlandsSDGDERRGAVSNESSGAGEQLAEWLKEAGRRTQSAARAEPAAAEDTYNSPASLHKYLEELAGRKLQTHAEVLAYLREVAGTQPDVHREVERRRMVREVSLLVLLAVSYLHFYYWEVQLEIAALQSVGVFVPAPEARPHKISS*
Ga0055485_1003223023300004067Natural And Restored WetlandsMSEDGGGEQLAQWLKEAGRRTQAAKAPPATADGDESYNSPASLHHYLEELAGRKLESHAEVLRYLREVAGAQPEGLRAQERRRMVREVSLLVLLAISYLHFYYWEVQLQIAALQSVGVFIPAPPARPHKISS*
Ga0055489_1001405443300004145Natural And Restored WetlandsVSNESSGAGEQLAEWLKEAGRRTQSAARAEPAAAEDTYNSPASLHKYLEELAGRKLQTHAEVLAYLREVAGTQPDVHREVERRRMVREVSLLVLLAVSYLHFYYWEVQLEIAALQSVGVFVPAPEARPHKISS*
Ga0074470_1148013883300005836Sediment (Intertidal)VQLGSIREEVLNEDETGGGELLARWLKEAGQRVQSKAKAQDGATADGDDTYNSPASLHRYLEELAGRKLQTHAQVLEFLKQAAGSQPHGYREYERRRMVREVVLILVLALSYLHFYFWEVQLQIAALNSVNVFVPAPESRAPKTRS*
Ga0075300_105591213300005876Rice Paddy SoilAGRADKQRPGPCVTVQPGSIRELALSDDDAGGGELLTHWLKEAGRRVQSKAKAQDGAAADGDDTYNAPASLHRYLEELAGRKLQTHAQVLEFLKQAAGSQPHGYREYERRRMVREVVLILVLALSYLHFYFWEVQLQIAALNSVNVFIPAPESRAPKTRS*
Ga0105095_1000921843300009053Freshwater SedimentMAEQDNGTGEQLAHWLAEAGRRSQPRGHASAVERADDTYNSPASLHKYLEELAHRKLQTHAEVLDYLREVAGSQPEAHAARERRRMVREIALLVLLAISYLHYYYWEVQLQIAALNSVSTFIPAKQARTAKRMI*
Ga0105107_1000253423300009087Freshwater SedimentMAEQDNGTGEQLAHWLAEAGRRSQPRGHASAVERADDTYNSPASLHKYLEELAHRKLQTHAEVLDYLREVAGSQPEAHAARERRRMVREIALLVLLAISYLHYYYWEVQLQIAALNSVRTFIPAKQARTAKRMI*
Ga0105094_1005929213300009153Freshwater SedimentMAEQDNGTGEQLAHWLAEAGRRSQPRGHASAVERADDTYNSPASLHKYLEELAHRKLQTHAEVLDYLREVAGSQPEAHAARERRRMVREIALLVLLAISYLHYYYWEVQLQIAALNSVSTFIP
Ga0105340_100426643300009610SoilMIDSGDGAGEQLAQWLKDAGRRAGLAAPAAAAADGDETYNSPASLHRYLEELAGKPLGSHAEVLNYLGEVAGAQPQTHYMRERRRMVRELALIGLLALSYLHFYYWDVQLQIAALNSARVFVPMAPQPLKKA*
Ga0137315_100040043300011395SoilMIDSGNGAGEQLAQWLKDAGRRAGLAALPAAAADSDETYNSPASLHRYLEELAGKPLRSHAEVLNYLGEVAGAQPQTHYMRERRRMVRELALIGLLALSYLHFYYWEVQLQIAALNSARVFILAPPPAEKKA*
Ga0137340_110956513300011405SoilMIDSGDGAGEQLAQWLKDAGRRAGLAAPAAAAADGDETYNSPASLHRYLEELAGKPLGSHAEVLNYLGEVAGAQPQTHYMRERRRMVRELALIGLLALSYLHFYYWEVQLQISALNSARVFIPVAPPTLKKA*
Ga0137450_101180013300011407SoilMIDSGNGAGEQLAQWLKDAGRRAGLVAPAAAADGDETYNSPASLHRYLEELAGRPLRSHAEVLNYLAEVAGGQPQGHYMNERRRMVRELALIGMLAVSYLHYYYWEVQLQIAGLSSARVFIPVAPPPLKKA*
Ga0137333_112571413300011413SoilMIDSGDGAGEQLAQWLKDAGRRAGLAAPAAAAADGDETYNSPASLHRYLEELAGKPLGSHAEVLNYLGEVAGAQPQTHYMRERRRMVRELALIGLLALSYLHFYYWDVQLQISALNSARVFIPVAPPSLKKA*
Ga0137442_100441113300011414SoilMSNSGNGAGEQLAQWLKDAGRRAGLVAPPAAAVDSDETYNSPASLHRYLEELAGKPLRSHAEVLNYLAEVAGAQPQAQYMRERRRMVRELALIGLLAMSYLHFYYWDVQLQIAALNSARVFMPAPPTPAKKA*
Ga0137446_108326323300011419SoilMSGSGNGAGEQLAQWLKDAGRRAGLAAPAAAAADGDETYNSPASLHRYLEELAGKPLRSHAEVLNYLGEVAGAQPQTHYMRERRRMVRELALIGLLALSYLHFYYWEVQLEISALNSARVFMPAPPPPEKKA*
Ga0137441_109533023300011425SoilVSEFPRRLLAGGGVSGNDNGGGEQLAQWLKDAGRRAGLVAPAAAADGDETYNSPASLHRYLEELAGRPLRSHAEVLNYLAEVAGGQPQGHYMSERRRMVRELALIGMLAVSYLHYYYWEVQLQIAGLSSARVFIPVAPPTLKKA*
Ga0137448_100094743300011427SoilVSGNDNGGGEQLAQWLKDAGRRAGLVAPAAAADGDETYNSPASLHRYLEELAGRPLRSHAEVLNYLAEVAGGQPQGHYMNERRRMVRELALIGMLAVSYLHYYYWEVQLQIAGLSSARVFIPVAPPPLKKA*
Ga0137443_100343723300011433SoilMIDSGDGAGEQLAQWLKDAGRRAGLAAPAAAAADGDETYNSPASLHRYLEELAGRPLRSHAEVLNYLAEVAGGQPQGHYMNERRRMVRELALIGMLAVSYLHYYYWEVQLQIAGLSSARVFIPVAPPPLKKA*
Ga0137426_126314013300011435SoilVSGNDNGGGEQLAQWLKDAGRRAGLVAPAAAADGDETYNSPASLHRYLEELAGKPLRSHAEVLNYLAEVAGGQPQGHYMNERRRMVRELALIGMLAVSYLHYYYWEVQLQIAGLSSARVFIPVAPPP
Ga0137458_110413123300011436SoilMIDSGDGAGEQLAQWLKDAGRRAGLVVPPAAAVDSDETYNSPASLHRYLEELAGKPLRSHAEVLNYLAEVAGAQPQAQYMRERRRMVRELALIGLLAMSYLHFYYWEVQLQIAALNSARVFVPAPPPAEKKA*
Ga0137429_112154913300011437SoilVSGNDNGGGEQLAQWLKDAGRRAGLVAPAAAADGDETYNSPASLHRYLEELAGRPLRSHAEVLNYLAEVAGGQPQGHYMSERRRMVRELALIGMLAVSYLHYYYWEVQLQIAGLSSARVFIPVAPPPLKKA*
Ga0137451_101778423300011438SoilVSGNDNGGGEQLAQWLKDAGRRAGLVAPAAAADGDETYNSPASLHRYLEELAGRPLRSHAEVLNYLTEVAGGQPQGHYMSERRRMVRELALIGMLAVSYLHYYYWEVQLQIAGLSSARVFIPVAPPPLKKA*
Ga0137451_105561323300011438SoilMSNSGNGAGEQLAQWLKDAGRRAGLVAPPAAAVDSDETYNSPASLHRYLEELAGKPLRSHAEVLNYLAEVAGGQPQTHYLRERRRMVRELALIGLLAMSYLHFYYWEVQLQIAALNSARVFIPAAAPEKKA*
Ga0137452_103468223300011441SoilVSGNDNGGGEQLAQWLKDAGRRAGLVAPAAAADGDETYNSPASLHRYLEELAGRPLRSHAEVLNYLAEVAGGQPQGHYMNERRRMVRELALIGLLALSYLHYYYWEVQLQIAGLSSARVFIPVAPPPLKKA*
Ga0137453_100831523300012034SoilMIDSGDGAGEQLAQWLKDAGRRAGLAAPAAAAADGDETYNSPASLHRYLEELAGKPLGSHAEVLNYLGEVAGAQPQTHYMRERRRMVRELALIGLLALSYLHFYYWDVQLQISALNSARVFIPVAPPTLKKA*
Ga0137445_103221923300012035SoilVSGNDNGGGEQLAQWLKDAGRRAGLAALPAAAADSDETYNSPASLHRYLEELAGRPLRSHAEVLNYLAEVAGGQPQGHYMNERRRMVRELALIGMLAVSYLHYYYWEVQLQIAGLSSARVFIPVAPPPLKKA*
Ga0137461_109598013300012040SoilMIDSGNGAGEQLAQWLKDAGRRAGVAALPAAAADSDETYNSPASLHRYLEELAGKPLRSHAEVLNYLGEVAGAQPQTHYMRERRRMVRELALIGLLALSYLHFYYWDVQLQIAALNSARVFMPAPPA
Ga0137332_104168523300012122SoilWLKDAGRRAGLVAPAAAADGDETYNSPASLHRYLEELAGKPLGSHAEVLNYLGEVAGAQPQTHYMRERRRMVRELALIGLLAVSYLHFYYWDVQLQISALNSARVFIPVAPPTLKKA*
Ga0137329_105672713300012133SoilMIDSGDGAGEQLAQWLKDAGRRAGLAALPAAAADSDETYNSPASLHRYLEELAGKPLRSHAEVLNYLGEVAGAQPQTHYMRERRRMVRELALIGLLALSYLHFYYWDVQLQIAALNSARVFIPTPL
Ga0137352_105202213300012164SoilLAQWLKDAGRRAGLAPLPAAPTDSDETYNSPASLHRYLEELAGKPLRSHAEVLNYLGEVAGAQPQTHYMRERRRMVRELALIGLLALSYLHFYYWDVQLQIAALNSARVFIPAPPPGEKKA*
Ga0137342_101250033300012171SoilVANGTPGNDNSSGEQLTQWLKEAGQRAGRSAPGAAAGDDGDETYNSPASLHRYLEELAGRPLRSHAEVLDFLEQVAGGEHRAHHDQRRQRMVREGTLLFMLAVSYLHYYYWEVQVQIATLKSVNTFLPAANLRPVKGVL*
Ga0137342_101778823300012171SoilMCMIDSGNGAGEQLAQWLKDAGRRAGLAPLPAAPTDSDETYNSPASLHRYLEELAGKPLRSHAEVLNYLGEVAGAQPQTHYMRERRRMVRELALIGLLALSYLHFYYWEVQLQIAALNSARVFIPAPPPAEKKA*
Ga0137327_109743113300012173SoilMIDSGDGAGEQLAQWLKDAGRRAGHAAPAAAAADGDETYNSPASLHRYLEELAGRPLRSHAEVLNYLAEVAGGQPQGHYMNERRRMVRELALIGMLAVSYLHYYYWEVQLQIAGLSSARVFIP
Ga0137434_103790123300012225SoilDHGAGEQLALWLKEAGQRARRGAPAPAIGDDTYNSPASLHRYLEELAGKPLRSHAEVLNYLGEVAGAQPQTHYMRERRRMVRELALIGLLALSYLHFYYWEVQLQIAALNSARVFMPAPPPPERRA*
Ga0137459_1000357123300012228SoilMIDSGDGAGEQLAQWLKDAGRRAGHAAPAAAAADGDETYNSPASLHRYLEELAGKPLGSHAEVLNYLGEVAGAQPQTHYMRERRRMVRELALIGLLALSYLHFYYWDVQLQIAALNSARVFVPMAPQPLKKA*
Ga0075314_103226823300014265Natural And Restored WetlandsVLSGNDEGGGELLAQWLKKAGRRAQSKGKASEGAASDADDTFNSPASLHRYLEELAGRKLQTHAEVLAFLKEVAGGQPQGHRDHERRRMVREVALIALLAISYLHFYYWEVQLQIAALKGVPVLVPAPTAQPSKIRS*
Ga0075325_100117043300014270Natural And Restored WetlandsVLSGNDEGGGELLAQWLKEAGRRAQSKGKASEGAASDADDTFNSPASLHRYLEELAGRKLQTHAEVLAFLKEVAGGQPQGHRDHERRRMVREVALIVLLAISYLHFYYWEVQLQIAALKGVPVLVPAPTAQPSKIRS*
Ga0075326_127880623300014271Natural And Restored WetlandsSNGEGEQLAQWLKEAGRRAQSTAPAAASDSDDSYNSPASLHRYLEELAGRPLGSHAEVLAYLREVAGAQPEVLRERERRRMVREVSLLALLAISYLHFYYWQVQLEIAALRSVSVFIPAPEVRPQKMSL*
Ga0075327_104970233300014272Natural And Restored WetlandsVGGVSNGEGEQLAQWLKEAGRRAQSAAPAVVGDGDDSYNSPASLHRYLEELAGRSLGSHAEVLAYLREVAGTQPEALRERERRRMVREVSLLALLAISYLHFYYWQVQLEIAALRSVSVFIPAPETRPHKMSL*
Ga0075321_100020253300014300Natural And Restored WetlandsVLSGNDEGGGELLAQWLKEAGRRAQSKGKASDGAASDADDTFNSPASLHRYLEELAGRKLQTHAEVLAFLKEVAGGQPQGHRDHERRRMVREVALIALLAISYLHFYYWEVQLQIAALKGVPVLVPAPTAQPSKIRS*
Ga0075340_100135733300014304Natural And Restored WetlandsMSEDGGGEQLAQWLKEAGRRTQAAKAPPATADSDESYNSPASLHHYLEELAGRKLESHAEVLRYLREVAGAQPEGLRAQERRRMVREVSLLVLLAISYLHFYYWEVQLQIAALQSVGVFIPAPPARPHKISS*
Ga0075340_112322613300014304Natural And Restored WetlandsMCHSAAGGDEQRGAVSNESNSGGEQLAEWLKEAGQRTQSASRDTPVASDDTTYNSPASLHKFLEELAGRKLQTHAEVLAYLREVAGTQPDAHRERERRRMVREVSLLVLLAVSYLHFYFWEVQLEIAALQSVGVFVPAPEARPHKI
Ga0075322_103242213300014311Natural And Restored WetlandsLLAQWLKEAGRRAQSKGKASEGAASDADDTFNSPASLHRYLEELAGRKLQTHAEVLAFLKEVAGGQPQGHRDHERRRMVREVALIVLLAISYLHFYYWEVQLQIAALKGVPVLVPAPTAQPSKIRS*
Ga0180096_103377913300014862SoilNGGGEQLAQWLKDAGRRAGLVAPAAAADGDETYNSPASLHRYLEELAGRPLRSHAEVLNYLAEVAGAQPQTHYMRERRRMVRELALIGLLAMSYLHFYYWEVQLQIAALNSARVFIPAPPLEKKA*
Ga0180068_102757023300014864SoilDGAGEQLAQWLKDAGRRAGLAAPAAAAADGDETYNSPASLHRYLEELAGKPLRSHAEVLNYLGEVAGAQPQTHYMRERRRMVRELALIGLLALSYLHFYYWDVQLQIAALNSARVFIPAPLPVEKKA*
Ga0180066_100061923300014873SoilMIDSGNGAGEQLAQWLKDAGRRAGLAPLPAAPTDSDETYNSPASLHRYLEELAGKPLRSHAEVLNYLGEVAGAQPQTHYMRERRRMVRELALIGLLALSYLHFYYWDVQLQIAALNSARVFIPTPLPVEKKA*
Ga0180084_102430623300014874SoilGGGVSGNDNGGGEQLAQWLKDAGRRAGLVAPAAAADGDETYNSPASLHRYLEELAGKPLGSHAEVLNYLGEVAGAQPQTHYMRERRRMVRELALIGLLALSYLHFYYWDVQLQIAALNSARVFVPMAPQPLKKA*
Ga0180083_101392213300014875SoilGECMIDSGNGAGEQLAQWLKDAGRRAGLAALPAAPTDSDETYNSPASLHRYLEELAGKPLRSHAEVLNYLGEVAGAQPQTHYMRERRRMVRELALIGLLALSYLHFYYWDVQLQIAALNSARVFVPMAPQPLKKA*
Ga0180064_107141413300014876SoilGVSGNDNGGGEQLAQWLKDAGRRAGLVAPAAAADGDETYNSPASLHRYLEELAGKPLGSHAEVLNYLGEVAGAQPQTHYMRERRRMVRELALIGLLALSYLHFYYWEVQLQISALNSARVFIPVAPPTLKKA*
Ga0180062_110146323300014879SoilWLKDAGRRAGLVAPAAAADGDETYNSPASLHRYLEELAGKPLGSHAEVLNYLGEVAGAQPQTHYMRERRRMVRELALIGLLALSYLHFYYWEVQLQISALNSARVFIPVAPPTLKKA*
Ga0180063_115609823300014885SoilMIDSGNGAGEQLAQWLKDAGRRAGLAPLPAAPTDSDETYNSPASLHRYLEELAGKPLRSHAEVLNYLGEVAGAQPQTHYMRERRRMVRELALIGLLALSYLHFYYWDVQLQIAALSSVRVMLPAPDFAAKKT*
Ga0180079_100655013300015248SoilSGDGAGEQLAQWLKDAGRRSGLAALPAAAADSDETYNSPASLHRYLEELAGKPLRSHAEVLNYLGEVAGAQPQTHYMRERRRMVRELALIGLLALSYLHFYYWEVQLQIAALNSARVFVPAPPPAEKKA*
Ga0180071_101136623300015249SoilMIDSGDGAGEQLAQWLKDAGRRAGLAPLPAAPTDSDETYNSPASLHRYLEELAGKPLRSHAEVLNYLGEVAGAQPQTHYMRERRRMVRELALIGLLALSYLHFYYWDVQLQISALNSARVFIPVAPPPLKKA*
Ga0180089_100192913300015254SoilNEAEEHLAQWLKDAGRRAALVAPAAASADSDETYNSPASLHRYLEELAGKPLRSHAEVLNYLGEVAGAQPQTHYMRERRRMVRELALIGLLALSYLHFYYWDVQLQIAALNSARVFIPAPPPAEKKA*
Ga0180067_103827323300015257SoilMIDSGDGAGEQLAQWLKDAGRRAGHAAPAAAAADGDETYNSPASLHRYLEELAGKPLGSHAEVLNYLGEVAGAQPQTHYMRERRRMVRELALIGLLALSYLHFYYWEVQLQISALNSARVFIPVAPPTLKKA*
Ga0187775_1016890723300017939Tropical PeatlandVSGELDNAGEQLADWLKEAGRRTQDASRASARPGADQDETFNSPASLHRYVEELAGRKLQSHAEVLEFLKEVAGTQPEAHVAREKRRMVREVALLLILALSYLHYYYWDVQLQIAALRSVNVFVPAPEVRPAKTSS
Ga0184616_1020032223300018055Groundwater SedimentMIDSGNGAGEQLAQWLKDAGRRAGLVAPAAAAADSDETYNSPASLHRYLEELAGKPLRSHAEVLNYLGEVAGAQPQTHYMRERRRMVRELALIGLLAISYLHFYYWDVQLQIAALNSARVFVPMAPQPLKKA
Ga0184615_1019328813300018059Groundwater SedimentMSNSGNGAGEQLAQWLKDAGRRAGLVAPPAAAVDSDETYNSPASLHRYLEELAGKPLRSHAEVLNYLAEVAGGQPQTHYMRERRRMVRELALIGLLAMSYLHFYYWEVQLQIAALNSTRVFMPAPPPEKKA
Ga0184615_1030471623300018059Groundwater SedimentVSGNDNGGGEQLAQWLKDAGRRAGLVAPAAAADGDETYNSPASLHRYLEELAGRPLRSHAEVLNYLAEVAGGQPQGHYMNERRRMVRELALIGMLAVSYLHYYYWEVQLQIAGLSSARVFIPVAPPPLKKA
Ga0184637_1049067323300018063Groundwater SedimentMSDDGNNAGEQVAQWLKEAGRRAPKHAPLPEPDAAAEFNSPASLHKYVEELAGRQLKTHADVLSYLREVAGSQPEAHAMRERHRMVRELALLALLAMSYLHFYYWEVQLQIAALNSVRIFMPASVPLDKKA
Ga0184636_133341613300018068Groundwater SedimentMSNSGNGAGEQLAQWLKDAGRRAGLVAPPAAAINSDETYNSPASLHRYLEELAGKPLRSHAEVLNYLAEVAGGQPQTHYLRERRRMVRELALIGLLAMSYLHFYYWEVQLQIAALNSARVFIPAPPLEKKA
Ga0184628_1000024553300018083Groundwater SedimentMIDSGDGAGEQLAQWLKDAGRRAGLAAPAAAAADGDETYNSPASLHRYLEELAGKPLGSHAEVLNYLGEVAGAQPQTHYMRERRRMVRELALIGLLALSYLHFYYWDVQLQIAALNSARVFVPMAPQPLKKA
Ga0184629_1009864733300018084Groundwater SedimentMSNSGNGAGEQLAQWLKDAGRRAGLVAPPAAAVDSDETYNSPASLHRYLEELAGKPLRSHAEVLNYLAEVAGGQPQTHYLRERRRMVRELALIGLLAMSYLHFYYWEVQLQIAALNSARVFIPAAPPEKKA
Ga0184629_1037078223300018084Groundwater SedimentMIDSGNGAGEQLAQWLKDAGRRAGLAALPAAPTDSDETYNSPASLHRYLEELAGRPLRSHAEVLNYLAEVAGAQPQTHYMRERRRMVRELALIGLLALSYLHFYYWEVQLQIAALNSARVFIPAPPPGEKKA
Ga0210379_1000441043300021081Groundwater SedimentMSNSGNGAGEQLAQWLKDAGRRAGLVAPPAAAVDSDETYNSPASLHRYLEELAGKPLRSHAEVLNYLAEVAGGQPQTHYLRERRRMVRELALIGLLAMSYLHFYYWEVQLQIAALNSARVFIPAAAPEKKA
Ga0210379_1018665223300021081Groundwater SedimentMSNSGNGAGEQLTQWLKDAGRRAGLVAPPAAAADSDETYNSPASLHRYLEELAGKPLRSHAEVLNYLAEVAGGQPQTHYMRERRRMVRELALIGLLAMSYLHFYYWEVQLQIAALNSARVFIPAPPPEKKA
Ga0210377_10006276103300021090Groundwater SedimentMSNSGNGAGEQLAQWLKDAGHRAGLVVPPAAAVNSDETYNSPASLHRYLEELAGKPLRSHAEVLNYLAEVAGGQPQTHYMRERRRMVRELALIGLLAMSYLHFYYWEVQLQIAALNSARVFIPAPPPEKKA
Ga0224497_1024528723300022209SedimentVPYGSIREFALSDNDANDGDLLPQWLKEAGRRAQSKAKTQAGGAADGDDTYNSPASLHRYLEELAGRKLQTHAQVLEFLKQAAGGQPQGYREHERRRMVREVLLIVVLLLSYLHFYYWEVQLQIAALNSVNVFIPAPEARAPQPRS
Ga0224500_1000164343300022213SedimentVSGGGNGSGEQLAEWLKEAGRRTQSAAREASDASDDTFNSPASLHKYLEDLAGRKLQTHADVLAYLRQVAGTQPDAHRERERRRMVREVSLLALLAVSYLHFYYWEVQLEIAALRSVGVFIPAPEARPHKITA
Ga0209108_1014649333300025165SoilVSGNDNGAGEQLAQWLKDAGRRAGHVAPAAAAGDGDEIYNSPASLHRYLEDLAGKPLRSHGEVLAYLAEVAGSQPQGYYISERRRMVRELALIALLAISYLHYYYWDVQLQIAALNSARVYVPMTASLEKKT
Ga0209640_1004354443300025324SoilMTEKDNGAGEHLAHWLAEAGRRSQPRGHASAVERGDDTYNSPASLHKYLEELAHRKLQTHAEVLDYLREVAGSQAEAHAARERRRMVREIALLVLLAISYLHYYYWEVQLQIAALNSVSTFIPAKQARTAKRMI
Ga0209640_1017375533300025324SoilLGSDNQGDGEILAQWLKEAGRRAQLQAQGEAVADGDDTYNSPASLHRYVEELAGRKLQTHAEVLEFLKEVAGSQPRGYREHERRRMVREVALIVLLAISYLHFYYWEVQLEIAAL
Ga0210061_100000553300025537Natural And Restored WetlandsLSGNDEGGGELLAQWLKEAGRRAQSKGKASEGAASDADDTFNSPASLHRYLEELAGRKLQTHAEVLAFLKEVAGGQPQGHRDHERRRMVREVALIALLAISYLHFYYWEVQLQIAALKGVPVLVPAPTAQPSKIRS
Ga0210096_105749823300025593Natural And Restored WetlandsVHAGLIREAALSDDETGSGELLTHWLKEAGRRAQSKAQAGDAADGDDTYNSPASLHRYLEELAGRKLQTHAQVLEFLKEAAGSQPQGYREHERRRMVREVVLIVVLALSYLHFYFWEVQLQIAALNSVNVFVPAPQSKTRKTQS
Ga0210115_100074343300025791Natural And Restored WetlandsLSGNDEGGGELLAQWLKEAGRRAQSKGKASEGAASDADDTFNSPASLHRYLEELAGRKLQTHAEVLAFLKEVAGGQPQGHRDHERRRMVREVALIVLLAISYLHFYYWEVQLQIAALKGVPVLVPAPTAQPSKIRS
Ga0210066_102166123300025951Natural And Restored WetlandsMSEDGGGEQLAQWLKEAGRRTQAAKAPPATADGDESYNSPASLHHYLEELAGRKLESHAEVLRYLREVAGAQPEGLRAQERRRMVREVSLLVLLAISYLHFYYWEVQLQIAALQSVGVFIPAPPARPHKISS
Ga0210116_107794013300025959Natural And Restored WetlandsVSNESSGAGEQLAEWLKEAGRRTQSAARAEPAAAEDTYNSPASLHKYLEELAGRKLQTHAEVLAYLREVAGTQPDVHREVERRRMVREVSLLVLLAVSYLHFYYWEVQLEIAALQSVGVFVPAPEARPHKISS
Ga0208144_100154533300026040Natural And Restored WetlandsVLSGNDEGGGELLAQWLKEAGRRAQSKGKASEGAASDADDTFNSPASLHRYLEELAGRKLQTHAEVLAFLKEVAGGQPQGHRDHERRRMVREVALIVLLAISYLHFYYWEVQLQIAALKGVPVLVPAPTAQPSKIRS
Ga0208293_100015023300026050Natural And Restored WetlandsMSEDGGGEQLAQWLKEAGRRTQAAKAPPATADSDESYNSPASLHHYLEELAGRKLESHAEVLRYLREVAGAQPEGLRAQERRRMVREVSLLVLLAISYLHFYYWEVQLQIAALQSVGVFIPAPPARPHKISS
Ga0208289_100060223300026052Natural And Restored WetlandsVLSGNDEGGGELLAQWLKEAGRRAQSKGKASDGAASDADDTFNSPASLHRYLEELAGRKLQTHAEVLAFLKEVAGGQPQGHRDHERRRMVREVALIALLAISYLHFYYWEVQLQIAALKGVPVLVPAPTAQPSKIRS
Ga0209703_102541513300027723Freshwater SedimentMAEQDNGTGEQLAHWLAEAGRRSQPRGHASAVERADDTYNSPASLHKYLEELAHRKLQTHAEVLDYLREVAGSQPEAHAARERRRMVREIALLVLLAISYLHYYYWEVQLQIAALNSVS
Ga0209592_100416243300027731Freshwater SedimentMAEQDNGTGEQLAHWLAEAGRRSQPRGHASAVERADDTYNSPASLHKYLEELAHRKLQTHAEVLDYLREVAGSQPEAHAARERRRMVREIALLVLLAISYLHYYYWEVQLQIAALNSVSTFIPAKQARTAKRMI
Ga0209078_121917613300027955Freshwater SedimentVRGGMAEQDNGTGEQLAHWLAEAGRRSQPRGHASAVERADDTYNSPASLHKYLEELAHRKLQTHAEVLDYLREVAGSQPEAHAARERRRMVREIALLVLLAISYLHYYYWEVQLQIAALNSVSTFIPAKQARTAKRMI
Ga0307281_1002648133300028803SoilMIDSGDGAGEQLAQWLKDAGRRAGLAAPAAAAADGDETYNSPASLHRYLEELAGKPLGSHAEVLNYLGEVAGAQPQTHYMRERRRTVRELALIGLLALSYLHFYYWDVQLQIAALNSARVFVPMAPQP
Ga0214473_1231896613300031949SoilEQLAQWLKDAGRRAGHVAPAAAAADGDEIYNSPASLHRYLEELAGKPLRSHAEVLNYLGEVAGAQPQTHYMRERRRMVRELALLGLLAVSYLHFYYWEVQLQIAALNSARVFIPAPPPLEKKA
Ga0326597_1020877923300031965SoilLSGNNEGGGEVLAQWLKEAGRRAQSPSQDEAAAERDDTYNSPASLHRYLEELAGRKLPTHAQVLEFLKEVAGSQPQGYREHERRRMVREVALIVLLAISYLHFYYWEVQLQIAALNSVNVFIPASESRSKKLNS
Ga0315910_1007843323300032144SoilVAVHGDGESLALWLKEAGRRAQRAVPAVEDGGDTYNSPASLHHYLEELAGKPLRSHTEVLAFLNAVAGQQPVNLRVVEHRRMVRELSLLALLALSYLQFYYWQVQLEIAALSTVRTFQLAPPSQAAQQKKT
Ga0335085_10006021123300032770SoilVGGEVNSAGEQLADWLKEAGRRTQETTRAGAKAGPDQDDTYNSPASLHRYLEELADHKLQSHAEVLQFLKEVAGSQPEAHAARERRRMVREIALLLILALSYLHYYYWDVQLQIAALRSVNVFVPAAPEVRPAKASS
Ga0335084_1023058433300033004SoilVGVEVNSAGEQLADWLKEAGRRTQETTRAGAKAGPDQDDTYNSPASLHRYLEELADHKLQSHAEVLQFLKEVAGSQPEAHAARERRRMVREIALLLILALSYLHYYYWDVQLQIAALRSAQVFVPAAPEVRPANASSS
Ga0364924_016491_957_13553300033811SedimentMIDSGDGAGEQLAQWLKDAGRRAGLAALPAAAADSDETYNSPASLHRYLEELAGKPLRSHAEVLNYLGEVAGAQPQTHYMRERRRMVRELALIGLLAMSYLHFYYWEVQLQIAALNSARVFMPAPPPPERRA
Ga0364926_000833_2334_27323300033812SedimentMIDSGDGAGEQLAQWLKDAGRRAGLAVPAAAAADSDETYNSPASLHRYLEELAGKPLRSHAEVLNYLGEVAGAQPQTHYMRERRRMVRELALIGLLALSYLHFYYWDVQLQIAALNSARVFIPAPPPAEKKA
Ga0364928_0001780_2300_26983300033813SedimentMIDSGDGAGEQLAQWLKDAGRRAGLAALPAAAADSDETYNSPASLHRYLEELAGKPLRSHAEVLNYLGEVAGAQPQTHYMRERRRMVRELALIGLLALSYLHFYYWDVQLQIAALNSARVFIPAPPPAEKKA
Ga0364928_0007984_698_10963300033813SedimentMIDSGDGAGEQLAQWLKDAGRRAGLAVPAAAAADSDETYNSPASLHRYLEELAGKPLSSHAEVLNYLSEVAGAQPQTHYMRERRRMVRELALIGLLAMSYLHFYYWEVQLQIAALNSARVFMPAPPPPERRA
Ga0364946_109217_232_6183300033815SedimentSGDGAGEQLAQWLKDAGRRSGLAALPAAAADSDETYNSPASLHRYLEELAGKPLRSHAEVLNYLGEVAGAQPQTHYMRERRRMVRELALIGLLAMSYLHFYYWEVQLQIAALNSARVFIPAPPPEKKA
Ga0364945_0001730_4128_45263300034115SedimentMIDSGDGAGEQLAQWLKDAGRRAGLAAPAAAAADGDETYNSPASLHRYLEELAGKPLGSHAEVLDYLGEVAGAQPQTHYMRERRRMVRELALIGLLALSYLHFYYWDVQLQIAALNSARVFVPMAPQPLKKA
Ga0364942_0055304_1_3903300034165SedimentSGNGAGEQLTQWLKDAGRRAGLVVPPAAAVDSDETYNSPASLHRYLEELAGKPLRSHAEVLNYLAEVAGGQPQTHYMRERRRMVRELALIGLLAMSYLHFYYWEVQLQIAALNSARVFIPAAPPPEKKA
Ga0364942_0222116_223_6153300034165SedimentDSGNGAGEQLAQWLKDAGRRAGVAALPAAAADSDETYNSPASLHRYLEELAGKPLRSHAEVLNYLGEVAGAQPQTHYMRERRRMVRELALIGLLALSYLHFYYWDVQLQIAALNSARVFIPAPLPVEKKA
Ga0364931_0039489_691_10863300034176SedimentMSNSGNGAGEQLTQWLKDAGRRAGLVAPPAAAADSDETYNSPASLHRYLEELAGRPLRSHAEVLNYLAEVAGAQPQTHYMRERRRMVRELALIGLLAMSYLHFYYWEVQLQIAALNSARVFIPAPPPEKKA
Ga0364932_0052915_508_9063300034177SedimentMIDSGDGAGEQLAQWLKDAGRRSGLAALPAAAADSDETYNSPASLHRYLEELAGKPLRSHAEVLNYLGEVAGAQPQTHYMRERRRMVRELALIGLLALSYLHFYYWDVQLQIAALNSARVFIPAPLPVEKKA
Ga0370545_078549_126_5213300034643SoilMSNSGNGAGEQLAQWLKDAGRRAGLVAPPAAAVDSDETYNSPASLHRYLEELAGKPLRSHAEVLNYLAEVAGAQPQTHYMRERRRMVRELALIGLLALSYLHFYYWEVQLQIAALNSARVFIPAPPPEKKA
Ga0364936_026048_1_3963300034773SedimentMIDSGDGAGEQLAQWLKDAGRRAGLAALPAAAADSDETYNSPASLHRYLEELAGKPLRSHAEVLNYLGEVAGAQPQTHYMRERRRMVRELALIGLLALSYLHFYYWDVQLQIAALNSARVFIPAPPPGEKKA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.