Basic Information | |
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Family ID | F086453 |
Family Type | Metagenome |
Number of Sequences | 110 |
Average Sequence Length | 48 residues |
Representative Sequence | MNVGSVTTQEVDPMVDFREGIKLLKNEYPQRALVRFKRAFESDENNAY |
Number of Associated Samples | 55 |
Number of Associated Scaffolds | 110 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 100.00 % |
% of genes near scaffold ends (potentially truncated) | 21.82 % |
% of genes from short scaffolds (< 2000 bps) | 21.82 % |
Associated GOLD sequencing projects | 46 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (79.091 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (48.182 % of family members) |
Environment Ontology (ENVO) | Unclassified (89.091 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (59.091 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 41.67% β-sheet: 0.00% Coil/Unstructured: 58.33% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Tropical Forest Soil Soil Soil Tropical Forest Soil |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
Ga0066395_109566922 | 3300004633 | Tropical Forest Soil | MTVGSATTPAFDPVFEFREGIKLLKNEYPQKALVRLKRAFE |
Ga0126374_100349645 | 3300009792 | Tropical Forest Soil | MTVGSATTHAFDPVFEFREGIKLLKNEYPQKALVRLKRAFESDQH |
Ga0126373_104708663 | 3300010048 | Tropical Forest Soil | MNVGDVTTQEVDPMADFREGIKLLRNEYPQKALVRFMRAFESDKHNTYYISFLGLA |
Ga0126373_107625621 | 3300010048 | Tropical Forest Soil | MNVGSVITQEVDPMVDFREGIKLLRNEYPQKALVRFMRAFESDKHNTYYISFLGL |
Ga0126373_107655221 | 3300010048 | Tropical Forest Soil | MNVGSVIDFRIGIKLLENEYPQRALVRFKRAFENDENNAYYISYL |
Ga0126373_128653861 | 3300010048 | Tropical Forest Soil | MKVGSVATQEVDPVVEFREGIKLLKNEYPQKALVRFKRAFESDKHNAYYISFFGLAIARAQR |
Ga0126381_1027021771 | 3300010376 | Tropical Forest Soil | MTVGSATTHAFDPVFEFREGIKLLKNEYPQKALVR |
Ga0182036_102726231 | 3300016270 | Soil | MNVGTVAQQVDPMVDFREGIKLLKNDYPQKALVRFKRAFESDKHNAYYISFPGLA |
Ga0182036_105856811 | 3300016270 | Soil | MNVGSVTTQEVDPMVDFREGIKLLKNEYPQRALVRFKRAFESDENNAYYISFLGLAIAR |
Ga0182036_111456452 | 3300016270 | Soil | MNVGSVTMQEVDFREGIKLLKNEYPQKALVRFKRAFES |
Ga0182041_1000166725 | 3300016294 | Soil | MNVRSVTAQEVDFREGMKLLRNEYPQRALVRFKRAFESDE |
Ga0182041_113206081 | 3300016294 | Soil | MVDFREGIKLLKNEYPQKALVRFKRAFENDENNAYYISYLGLAIA |
Ga0182041_114964491 | 3300016294 | Soil | MNAGSVATQEVDPMVDFREGIKLLKNEYPQKALVRFKRAFERDKHN |
Ga0182041_116039711 | 3300016294 | Soil | MNVGSVTMQEVDFREGIKLLKNEYPQKALVRFKRAFESDENNAYYISFL |
Ga0182033_110022961 | 3300016319 | Soil | MTVGSATTPAFDPVFEFREGIKLLKNEYPQKALVRLKRAFES |
Ga0182035_115554341 | 3300016341 | Soil | MNVGSVATQEVDPMVEFREGIKLLKNEYPQKALVR |
Ga0182032_100414521 | 3300016357 | Soil | MNVGDVTTQEVDPMVDFREGIKLLKNEYPQKAFVR |
Ga0182032_101176301 | 3300016357 | Soil | MNVGFVATQDDPMVDFREGIKLLKNEYPQKALVRFKRAFESDENNAY |
Ga0182032_113768782 | 3300016357 | Soil | MNAGSVATQEVDPMVDFREGIKLLKNEYPQKALVRLQRA |
Ga0182032_114420021 | 3300016357 | Soil | MNVGSVTTQEVDPVVEFREGIKLLKNEYPQKALARFK |
Ga0182032_119670911 | 3300016357 | Soil | MNVGTVAQQVDPMVDFREGIKLLKNEYPQKALVRLQRA |
Ga0182034_100598823 | 3300016371 | Soil | MNVGSVATQEVDPMVEFREGIKLLKNEYPQEALVRFKRAFESDKHNAYYISFL |
Ga0182034_110788721 | 3300016371 | Soil | MNVGSVTTQEVDFRIGIKLLENEYPQRALVRFKRAFE |
Ga0182037_105823611 | 3300016404 | Soil | MTVGSATTHAFDPVFEFREGIKLLKNEYPQKALVRLKRAFES |
Ga0182037_111485742 | 3300016404 | Soil | MNVGSVTTQEVDPMVDFREGIKLLRNEYPQKALVRFMRAFESDK |
Ga0182037_112546951 | 3300016404 | Soil | MSFGSATTLVDDPMVEFREGIKLLKNEYPQKALVRLKRAFESDQHNVYYI |
Ga0182037_117286291 | 3300016404 | Soil | MNVGSVATEVDPMVEFREGIKLLKNEYPQKALVRFKRAFESEKHNAYYISFLG |
Ga0182039_104413611 | 3300016422 | Soil | MNVGSVTTQEVDNMVDFREGIKLLKNEYPQKALVRFKRAFESDKYNAYYISFLGLAIARA |
Ga0182039_110960181 | 3300016422 | Soil | MNVGSVATQEVDPMVEFREGIKLLKNEYPQKALVRFKRAFES |
Ga0182039_114327932 | 3300016422 | Soil | MNVGSVTMQEVDFREGIKLLKNEYPQKALVRFKRAFE |
Ga0182039_116030051 | 3300016422 | Soil | MSFGSATTLVDDPMVEFREGIKLLKNEYPQKALVRLKRAFESDQHNVYYIS |
Ga0182038_102661771 | 3300016445 | Soil | MNAGSVATQEVDPMVDFREGIKLLKNEYPQKALVRFKRAFESDKHNAYYISFLG |
Ga0182038_105756062 | 3300016445 | Soil | MNVGSISTQEVDPMVEFREGIKLLKNDYPQKALVRFKRAFESEKHNAYYISFFGLAIARA |
Ga0182038_108336501 | 3300016445 | Soil | MNVGSVTTQEVDNMVDFREGIKLLKNEYPQKALVRFKRAFESDEN |
Ga0182038_108551721 | 3300016445 | Soil | MNVGSVATQEVDPMVDFREGIKLLKNEYPQKALVRFKRAFERDKHNAY |
Ga0126371_108614143 | 3300021560 | Tropical Forest Soil | MTVGSATTHAFDPVVEFREGIKLLKNEYPQKALVRLKRAFESDQHNVYYISF |
Ga0126371_110199431 | 3300021560 | Tropical Forest Soil | MNVGDVTTQEVDPMADFREGIKLLRNEYPQKALVRFMRAFESDKHNTYYISFLG |
Ga0207858_10170102 | 3300026909 | Tropical Forest Soil | MNVGSVTTQEVDPMVDFREGIKLLKNEYPQKALVRFKRAFES |
Ga0207815_10167081 | 3300027014 | Tropical Forest Soil | MNVGSVATQEVDPMVDFREGIKLLKNEYPQKALVRFKRAFERDKHNPYYISFLGLAIA |
Ga0207777_100298512 | 3300027330 | Tropical Forest Soil | MNVRSVTTQEVDFREGIKLLNNEYPQRALVRFKRAFERDENNAYYISFL |
Ga0318516_103694671 | 3300031543 | Soil | MNVGFVATQDDPMVDFREGIKLLKNEYPQKALVRFKRAFESDENNAYYM |
Ga0318541_106431561 | 3300031545 | Soil | MNVGSVATQEVDPMVDFREGIKLLKNEYPQRALVRFKRAFESDENNAYYISFLGLAIA |
Ga0318541_107368581 | 3300031545 | Soil | MNVGSVTMQEVDFREGIKLLKNEYPQKALVRFKRAFESEENNAYY |
Ga0318538_101958861 | 3300031546 | Soil | MNVGSVTTQEVDPMVDFREGIKLLKNEYPQRALVRFKRAF |
Ga0318538_105611891 | 3300031546 | Soil | MNVGSVATQEVDPMVDFREGIKLLKNEYPQKALVRFKRAFERDKHNAYYISFLGLAIA |
Ga0318528_105958751 | 3300031561 | Soil | MNVGSVTMQEVDFREGIKLLKNEYPQKALVRFKRAFESDEN |
Ga0310915_101405354 | 3300031573 | Soil | MNVRSVTAQEVDFREGMKLLRNEYPQRALVRFKRAFESDEN |
Ga0310915_106949341 | 3300031573 | Soil | MNVGSISTQEVDPMVEFREGIKLLKNDYPQKALVRFKRAFESEK |
Ga0318542_104024582 | 3300031668 | Soil | MNVGSVTTQEVDPMVDFREGIKLLKNEYPQRALVRFKRAFESDENNAY |
Ga0318542_107098961 | 3300031668 | Soil | MNVGSVTTQEVDNMVDFREGIKLLKNEYPQKALVRFKRAFESDKYNAYY |
Ga0306917_103474611 | 3300031719 | Soil | MNVRSVTTQEVAFREGIKLLKNEYPQKALVRFKRAVEGDENNAYYLNPAYSQLSEWNNKA |
Ga0306917_103707612 | 3300031719 | Soil | MNAGSVATQEVDPMVDFREGIKLLKNEYPQKALVRFKRAFERDKHNAYYIS |
Ga0306917_112425911 | 3300031719 | Soil | MNVGSVTMQEVDFREGIKLLKNEYPQKALVRFKRAFESDENNAY |
Ga0318500_103696832 | 3300031724 | Soil | MNAGSVATQEVDPMVDFREGIKLLKNEYPQKALVRFKRAFERDKHNPYF |
Ga0306918_101873544 | 3300031744 | Soil | MNVGSVTTQEVDPMVDFREGIKLLKNEYPQRALVRFKRAFESDENNAYYISFL |
Ga0306918_115611002 | 3300031744 | Soil | MNVGSVTTQEVDPMVDFREGIKLLRNEYPQKALVRFMRAFESDKYNAYYISFLGLA |
Ga0318521_102497783 | 3300031770 | Soil | MNVRSVTAQEVDFREGMKLLRNEYPQRALVRFKRAFESDENNAYYISFLGLAI |
Ga0318508_10845031 | 3300031780 | Soil | MNVGSVTMQEVDFREGIKLLKNEYPQKALVRFKRAFESDENNAYY |
Ga0318547_109396091 | 3300031781 | Soil | MNVGSISTQEVDPMVEFREGIKLLKNDYPQKALVRFKRAFESEKHNAYY |
Ga0318552_103416221 | 3300031782 | Soil | MNVGDVTTQEVDPMVDFREGIKLLKNEYPQRALVRFKRAFESDENN |
Ga0318576_105999931 | 3300031796 | Soil | MNVGSVTKQEVDFRIGIKLLENEYPQRALVRFKRAFENDENNAYYISYLGLAIA |
Ga0318567_108317181 | 3300031821 | Soil | MNVGFVATQDDPMVDFREGIKLLKNEYPQKALVRFKRAFESDENNAYYISFLGL |
Ga0310917_100068471 | 3300031833 | Soil | MNVRSVTAQEVDFREGMKLLRNEYPQRALVRFKRAFESDENNAYYI |
Ga0306919_100739181 | 3300031879 | Soil | MNVRSVTAQEVDFREGMKLLRNEYPQRALVRFKRAFESDENNAYYISFLG |
Ga0306925_100894095 | 3300031890 | Soil | MNVGSVAQQVDPMVDFREGIKLLKNEYPQKALVRFKRAFESDKHNA |
Ga0306925_104952032 | 3300031890 | Soil | MNAGSVATQEVDPMVDFREGIKLLKNEYPQKALVRFKRAFERDKHNAYYISFLGLAI |
Ga0306925_113038361 | 3300031890 | Soil | MNVGSVTTQEVDFRIGIKLLENEYPQRALVRFKRAFENDENNAYY |
Ga0318522_103948152 | 3300031894 | Soil | MNVGSVATQEVDPMVEFREGIKLLKNEYPQEALVRFKRAFESD |
Ga0306923_105335692 | 3300031910 | Soil | MTVGSATTHAFDPVVEFREGIKLLKNEYPQKALVRLKRAFESDQHNVYYISFLG |
Ga0306923_117150601 | 3300031910 | Soil | MNVGSVITQEVDPMVDFREGIKLLRNEYPQKALVRFKRAFESDKYNAYYISFLGLAIA |
Ga0306921_102904793 | 3300031912 | Soil | MVDFREGIKLLKNEYPQKALARFKRAFESDENNAYYMSFLGLAIARAQRK |
Ga0306921_108277211 | 3300031912 | Soil | MNVGSVTKQEVDPMVDFREGIKLLKNEYPQGALVRFKRAFESDEN |
Ga0306921_127850492 | 3300031912 | Soil | MNVRSVTTQEVDFREGMKLLRNEYPQRAVVRFKRAFES |
Ga0310912_100169931 | 3300031941 | Soil | MNVGSVIDFRIGIKLLENEYPQRALVRFKRAFENDENNAYY |
Ga0310912_102720492 | 3300031941 | Soil | MNVGFVATQDDPMVDFREGIKLLKNEYPQKALVRFKRAFESDNNN |
Ga0310916_100410991 | 3300031942 | Soil | MNVGSVATKEVDFREGMKLLRNEYPQRALVRFKRAFES |
Ga0310916_104212723 | 3300031942 | Soil | MTVGSATTHAFDPVFEFREGIKLLKNEYPQKALVRLKRAFESDQHNVYYISFLGLA |
Ga0310916_104226152 | 3300031942 | Soil | MTVGSATTHAFDPVFEFREGIKLLKNEYPQKALVRLKRAF |
Ga0310916_112211602 | 3300031942 | Soil | MTVGSATTHAFDPVVEFREGIKLLKNDYPQKALVRLKRAFESDQHNVYYISFLGLA |
Ga0310913_101769851 | 3300031945 | Soil | MNVGSVATQEVDPMVDFREGIKLLKNEYPQKALVRFKRAFERDKHNAYYISFLGLAI |
Ga0310913_105063063 | 3300031945 | Soil | MNVGSVTTQEVDPMVDFREGIKLLKNEYPQRALVRFKRAFESDENNAYCIS |
Ga0310913_106119042 | 3300031945 | Soil | MNVGSVAQQVDPMVDFREGIKLLKNEYPQKALVRFKRAFESDKHNAYYISFLG |
Ga0310913_107518893 | 3300031945 | Soil | MNVGSVATKEVDFREGMKLLRNEYPQRALVRFKRAFESDENN |
Ga0310913_108341191 | 3300031945 | Soil | MTVGSATTHAFDPVVEFREGIKLLRNEYPQKALVRLKRAFESDQHNVY |
Ga0310913_108876271 | 3300031945 | Soil | MNVGSVIDFRIGIKLLENEYPQRALVRFKRAFENDENNAYYIS |
Ga0310910_1000115228 | 3300031946 | Soil | MNVRSVTAQEVDFREGMKLLRNEYPQRALVRFKRAFESDENNAYYISFL |
Ga0310910_101247223 | 3300031946 | Soil | MNVGSVATQEVDPMVEFREGIKLLKNEYPQEALVRFKRAFESDKHNAYYISFLGLATA |
Ga0310910_109124901 | 3300031946 | Soil | MNVVPVATQEVDPMVEFREGIKLLKNEYPQKALVRFKRAFESDKHNAYYISFLGLAIARAQRK |
Ga0310909_106053272 | 3300031947 | Soil | MNVGSVATQEVDPMVEFREGIKLLKNEYPQEALVRFKRAFESDKHNAYYI |
Ga0310909_112010141 | 3300031947 | Soil | MNVGSVAQQVDPMVDFREGIKLLKNEYPQKALVRFK |
Ga0306926_108231082 | 3300031954 | Soil | MNVRSVTTQEVAFREGIKLLKNEYPQKALVRFKRAVEGDENNAYYISFLGL |
Ga0306926_111657282 | 3300031954 | Soil | MNVGSVIDFRIGIKLLENEYPQRALVRFKRAFENDEN |
Ga0306926_115567722 | 3300031954 | Soil | MNVGSVITQEVDPMVDFREGIKLLRNEYPQKALVRFKRAFESDKYNAYYISFLG |
Ga0306926_116253013 | 3300031954 | Soil | MNVGSVATKEVDFREGMKLLRNEYPQRALVRFKRAFESDEN |
Ga0306922_102160574 | 3300032001 | Soil | MNVGSVTTQEVDPMVDFREGIKLLKNEYPQRALVRFKRAFESDENNAYYISFLGLAI |
Ga0306922_107011341 | 3300032001 | Soil | MTVGSATTHAFDPVVEFREGIKLLRNEYPQKALVRLKRAFESDQHNVYYISFLGL |
Ga0306922_122782272 | 3300032001 | Soil | MNVGSVATQEVDPMVDFREGIKLLKNEYPQKALVRFKRAFER |
Ga0318545_103844083 | 3300032042 | Soil | MTVGSATTHAFDPVFEFREGIKLLKNEYPQKALVRLKRAFESD |
Ga0318558_103638412 | 3300032044 | Soil | MNAGSVATQEVDPMVDFREGIKLLKNKYPQKALVRFMRAFESDKHNAYYISFLGLAIARAQRKW |
Ga0318532_100787282 | 3300032051 | Soil | MNVRSVTTQEVAFREGIKLLKNEYPQKALVRFKRAVEGDENNAYY |
Ga0318506_100326351 | 3300032052 | Soil | MNVGSVTTQEVDNMVDFREGIKLLKNEYPQKALVRFK |
Ga0318506_103351251 | 3300032052 | Soil | MNAGSVATQEVDPMVDFREGIKLLKNEYPQKALVRFKRAFERDKHNPYFISFLGLTIARA |
Ga0318533_104954642 | 3300032059 | Soil | MTVGSATTHAFDPVFEFREGIKLLKNEYPQKALVRLKRAFESDQHNVYY |
Ga0318524_107662031 | 3300032067 | Soil | MNVGSVTTQEVDNMVDFREGIKLLKNEYPQKALVRFKRAFESDKYNAYYISFLGLA |
Ga0306924_103360014 | 3300032076 | Soil | MNVGSVATKEVDFREGMKLLRNEYPQRALVRFKRAFESDENNAYYISF |
Ga0306924_111080023 | 3300032076 | Soil | MNVGSVTTQEVDPMVDFREGIKLLKNEYPQRALVRFKRAFESDENNAYYISFLGLAIARA |
Ga0318540_105631421 | 3300032094 | Soil | MNVRSVTTQEVDFREGMKLLRNEYPQRAVVRFKRAFESDENNAYYI |
Ga0306920_1006611031 | 3300032261 | Soil | MNVGSVATQEVDPMVDFREGIKLLKNEYPQRALVRFKRAFESDENNAYYISFLGLAIARA |
Ga0306920_1008515113 | 3300032261 | Soil | MTVGSATTHAFDPVVEFREGIKLLRNEYPQKALVRLKRAFESDQHNVYYISF |
Ga0318519_103879391 | 3300033290 | Soil | MTVGSATTHAFDPVFEFREGIKLLKNEYPQKALVRLKRAFESDQHNVYYISFLG |
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