Metagenome / Metatranscriptome Family F086327

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086327
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	73 residues
Representative Sequence	MEAHVTAYSQADRLRERMAQAEVRHGQEIRVDLPGIRVTAMGRNWFTGRPTGKGEVFFCTMGPVRVRET
Number of Associated Samples	92
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	85.59 %
% of genes near scaffold ends (potentially truncated)	99.10 %
% of genes from short scaffolds (< 2000 bps)	96.40 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.198 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (27.928 % of family members)
Environment Ontology (ENVO)	Unclassified (27.027 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (27.928 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.43% β-sheet: 14.43% Coil/Unstructured: 71.13%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF01949	DUF99	3.60
PF00999	Na_H_Exchanger	1.80
PF13589	HATPase_c_3	0.90
PF04030	ALO	0.90
PF00011	HSP20	0.90
PF01037	AsnC_trans_reg	0.90
PF05067	Mn_catalase	0.90
PF01979	Amidohydro_1	0.90
PF07313	DUF1460	0.90
PF04430	DUF498	0.90
PF03167	UDG	0.90
PF01641	SelR	0.90
PF13472	Lipase_GDSL_2	0.90
PF00578	AhpC-TSA	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG1628	Endonuclease V homolog, UPF0215 family	General function prediction only [R]	3.60
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	1.80
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	1.80
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	1.80
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	1.80
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	1.80
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.90
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	0.90
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.90
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.90
COG1504	Uncharacterized conserved protein, DUF498 domain	Function unknown [S]	0.90
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.90
COG3546	Mn-containing catalase (includes spore coat protein CotJC)	Inorganic ion transport and metabolism [P]	0.90
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	0.90
COG3737	Uncharacterized protein, contains Mth938-like domain	Function unknown [S]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.20 %
Unclassified	root	N/A	1.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.20 %
Unclassified	root	N/A	1.80 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.20 %
Unclassified	root	N/A	1.80 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	75.68 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	12.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.80 %
Unclassified	root	N/A	1.80 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	75.68 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	11.71 %
Unclassified	root	N/A	1.80 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.90 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.90 %

Name	Rank	Taxonomy	Distribution
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	75.68 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	9.91 %
Unclassified	root	N/A	1.80 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.90 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.90 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.90 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	75.68 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	9.91 %
Unclassified	root	N/A	1.80 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.90 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	0.90 %
Gemmatimonadetes bacterium RBG_16_66_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium RBG_16_66_8	0.90 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.90 %

Name	Rank	Taxonomy	Distribution
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	75.68 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	8.11 %
Unclassified	root	N/A	1.80 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	0.90 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.90 %
Gemmatimonadetes bacterium RBG_16_66_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium RBG_16_66_8	0.90 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.90 %

Name	Rank	Taxonomy	Distribution
unclassified Rubrobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae	75.68 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	8.11 %
Unclassified	root	N/A	1.80 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	0.90 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	0.90 %
Gemmatimonadetes bacterium RBG_16_66_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium RBG_16_66_8	0.90 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.90 %

Name	Rank	Taxonomy	Distribution
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	75.68 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	8.11 %
Unclassified	root	N/A	1.80 %
Flavisolibacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Flavisolibacter	0.90 %
Stigmatella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella	0.90 %
Gemmatimonadetes bacterium RBG_16_66_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium RBG_16_66_8	0.90 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.90 %

Name	Rank	Taxonomy	Distribution
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	75.68 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	8.11 %
Unclassified	root	N/A	1.80 %
Flavisolibacter tropicus	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Flavisolibacter → Flavisolibacter tropicus	0.90 %
Stigmatella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella	0.90 %
Gemmatimonadetes bacterium RBG_16_66_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium RBG_16_66_8	0.90 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000787\|JGI11643J11755_11636758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	836	Open in IMG/M
3300001431\|F14TB_100364844	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
3300003997\|Ga0055466_10021405	All Organisms → cellular organisms → Bacteria	1403	Open in IMG/M
3300005440\|Ga0070705_100250509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1243	Open in IMG/M
3300005444\|Ga0070694_100445071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1022	Open in IMG/M
3300005445\|Ga0070708_101328067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	671	Open in IMG/M
3300005445\|Ga0070708_101578854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	611	Open in IMG/M
3300005445\|Ga0070708_101878524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	555	Open in IMG/M
3300005467\|Ga0070706_100537857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1087	Open in IMG/M
3300005468\|Ga0070707_101789801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	581	Open in IMG/M
3300005549\|Ga0070704_100448571	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300005558\|Ga0066698_10347871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1024	Open in IMG/M
3300005873\|Ga0075287_1053521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	558	Open in IMG/M
3300005937\|Ga0081455_10495658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	822	Open in IMG/M
3300006797\|Ga0066659_10917129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	732	Open in IMG/M
3300006871\|Ga0075434_101757625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	627	Open in IMG/M
3300006894\|Ga0079215_11631794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	514	Open in IMG/M
3300006914\|Ga0075436_101378092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	534	Open in IMG/M
3300007076\|Ga0075435_101526019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	586	Open in IMG/M
3300009038\|Ga0099829_11136910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	647	Open in IMG/M
3300009088\|Ga0099830_10366829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1160	Open in IMG/M
3300009089\|Ga0099828_10085866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	2695	Open in IMG/M
3300009089\|Ga0099828_10506620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1088	Open in IMG/M
3300009157\|Ga0105092_10209206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1091	Open in IMG/M
3300009162\|Ga0075423_11276715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	785	Open in IMG/M
3300009808\|Ga0105071_1086527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	553	Open in IMG/M
3300010037\|Ga0126304_10179372	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1379	Open in IMG/M
3300010037\|Ga0126304_10262852	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1137	Open in IMG/M
3300010038\|Ga0126315_10767459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	633	Open in IMG/M
3300011003\|Ga0138514_100019273	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1209	Open in IMG/M
3300012096\|Ga0137389_10540160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1001	Open in IMG/M
3300012201\|Ga0137365_10952977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	624	Open in IMG/M
3300012211\|Ga0137377_10686708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	959	Open in IMG/M
3300012359\|Ga0137385_11056702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	669	Open in IMG/M
3300012469\|Ga0150984_108337045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	518	Open in IMG/M
3300012930\|Ga0137407_10794382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	893	Open in IMG/M
3300012957\|Ga0164303_11405598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	522	Open in IMG/M
3300012989\|Ga0164305_11627139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	577	Open in IMG/M
3300013772\|Ga0120158_10430891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	598	Open in IMG/M
3300017654\|Ga0134069_1271177	Not Available	595	Open in IMG/M
3300017927\|Ga0187824_10379643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	512	Open in IMG/M
3300017997\|Ga0184610_1093450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	946	Open in IMG/M
3300017997\|Ga0184610_1267913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	566	Open in IMG/M
3300018027\|Ga0184605_10477839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	545	Open in IMG/M
3300018028\|Ga0184608_10104214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1187	Open in IMG/M
3300018028\|Ga0184608_10136437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1050	Open in IMG/M
3300018028\|Ga0184608_10179383	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	923	Open in IMG/M
3300018051\|Ga0184620_10049032	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1181	Open in IMG/M
3300018051\|Ga0184620_10287930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	553	Open in IMG/M
3300018053\|Ga0184626_10454232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	503	Open in IMG/M
3300018056\|Ga0184623_10003171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7018	Open in IMG/M
3300018075\|Ga0184632_10098393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1281	Open in IMG/M
3300018076\|Ga0184609_10105793	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	1268	Open in IMG/M
3300018076\|Ga0184609_10170794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1007	Open in IMG/M
3300018076\|Ga0184609_10269271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	797	Open in IMG/M
3300018076\|Ga0184609_10335005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	707	Open in IMG/M
3300018076\|Ga0184609_10389864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	649	Open in IMG/M
3300018077\|Ga0184633_10299053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	821	Open in IMG/M
3300018078\|Ga0184612_10129697	Not Available	1319	Open in IMG/M
3300018429\|Ga0190272_10423071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1097	Open in IMG/M
3300018465\|Ga0190269_11625500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	540	Open in IMG/M
3300019254\|Ga0184641_1253823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	598	Open in IMG/M
3300019259\|Ga0184646_1109566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	595	Open in IMG/M
3300019259\|Ga0184646_1373434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	503	Open in IMG/M
3300021344\|Ga0193719_10264984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	725	Open in IMG/M
3300021413\|Ga0193750_1037285	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1075	Open in IMG/M
3300025537\|Ga0210061_1065081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	628	Open in IMG/M
3300025914\|Ga0207671_10628574	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium RBG_16_66_8	855	Open in IMG/M
3300025939\|Ga0207665_11168920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	614	Open in IMG/M
3300025996\|Ga0208777_1022163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	547	Open in IMG/M
3300027577\|Ga0209874_1101125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	687	Open in IMG/M
3300027647\|Ga0214468_1137355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	615	Open in IMG/M
3300027846\|Ga0209180_10071183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1950	Open in IMG/M
3300027875\|Ga0209283_10303882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1052	Open in IMG/M
3300027882\|Ga0209590_10482180	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	801	Open in IMG/M
3300028578\|Ga0272482_10042494	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300028592\|Ga0247822_11351310	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300028711\|Ga0307293_10077758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1046	Open in IMG/M
3300028784\|Ga0307282_10215514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	919	Open in IMG/M
3300028784\|Ga0307282_10510428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	584	Open in IMG/M
3300028793\|Ga0307299_10376463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	532	Open in IMG/M
3300028819\|Ga0307296_10287390	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300028824\|Ga0307310_10140390	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1107	Open in IMG/M
3300028828\|Ga0307312_10030269	All Organisms → cellular organisms → Bacteria	3149	Open in IMG/M
3300028828\|Ga0307312_10617284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	717	Open in IMG/M
3300028828\|Ga0307312_10875361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	595	Open in IMG/M
3300028878\|Ga0307278_10548777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	504	Open in IMG/M
3300028885\|Ga0307304_10466513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	576	Open in IMG/M
3300030006\|Ga0299907_10302882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1303	Open in IMG/M
3300030006\|Ga0299907_10711999	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300030619\|Ga0268386_10112892	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella	2094	Open in IMG/M
3300030620\|Ga0302046_10173893	All Organisms → cellular organisms → Bacteria	1769	Open in IMG/M
3300030620\|Ga0302046_11129331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	619	Open in IMG/M
3300030830\|Ga0308205_1065281	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Flavisolibacter → Flavisolibacter tropicus	506	Open in IMG/M
3300030903\|Ga0308206_1094723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	661	Open in IMG/M
3300031093\|Ga0308197_10158116	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	735	Open in IMG/M
3300031094\|Ga0308199_1183089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	518	Open in IMG/M
(restricted) 3300031248\|Ga0255312_1064753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	879	Open in IMG/M
3300031421\|Ga0308194_10280510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	570	Open in IMG/M
3300031424\|Ga0308179_1013235	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	834	Open in IMG/M
3300031903\|Ga0307407_11166007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	601	Open in IMG/M
3300031911\|Ga0307412_10850308	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	796	Open in IMG/M
3300032005\|Ga0307411_11423033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	635	Open in IMG/M
3300032075\|Ga0310890_11170223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	625	Open in IMG/M
3300032205\|Ga0307472_101671509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	628	Open in IMG/M
3300032421\|Ga0310812_10485268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	556	Open in IMG/M
3300033412\|Ga0310810_11318758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	565	Open in IMG/M
3300034088\|Ga0373912_0243295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	503	Open in IMG/M
3300034178\|Ga0364934_0352000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	558	Open in IMG/M
3300034178\|Ga0364934_0402309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	518	Open in IMG/M
3300034644\|Ga0370548_022118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	980	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.09%
Host-Associated	Host-Associated	9.01%
Engineered	Engineered	0.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.57%
Aquatic	Environmental → Aquatic	22.52%
Plants	Host-Associated → Plants	9.01%
Bioremediation	Engineered → Bioremediation	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.86%
Sediment	Environmental → Aquatic → Sediment	16.22%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.11%
Freshwater	Environmental → Aquatic → Freshwater	4.50%
Marine	Environmental → Aquatic → Marine	1.80%
Floodplain	Environmental → Terrestrial → Floodplain	1.80%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.90%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.90%
Metal	Engineered → Bioremediation → Metal	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	16.22%
Loam	Environmental → Terrestrial → Soil → Loam	9.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.21%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.60%
Sand	Environmental → Terrestrial → Soil → Sand	2.70%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.80%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.80%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.80%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.90%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.90%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.90%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.34%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	16.22%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.21%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.60%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.70%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.70%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.80%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.80%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.80%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.80%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.90%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.90%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.90%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.90%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.90%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	27.93%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	16.22%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.11%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.60%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.70%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.70%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.80%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.80%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.80%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.90%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.90%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.90%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.90%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.90%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.90%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.90%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003997	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005873	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009808	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300025537	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1 (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025996	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027647	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38 HiSeq	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028578	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300030830	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031248 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031424	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_150 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034088	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B5A4.1	Engineered	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M
3300034644	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11643J11755_116367581	3300000787	Soil	MEARVTNYSQADRLKNRMEQAAVRHGQEIRADLPGIKVGASASNWFLPRDKRRGEVFFCTMGPIRVREVTNPGDDRPLPTSVVLEGL
F14TB_1003648443	3300001431	Soil	MEAQVTANSQVHRLKERLEQAEVRHGQEIRADLPGIMVTAARSWLGSRQSDKGEVFF
Ga0055466_100214051	3300003997	Natural And Restored Wetlands	MQARVTAASQTYRLRERMEKAEVEHGQEIRADLPGVRVMAMGRDWLTLRPQPVGEVFFCTMGPVRVRKQTIAGDGRTL
Ga0070705_1002505091	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MEARVTSYSQTERLRERMEKASVRHGQEIRADLPGVRVAASPRNWFVSRAKHKGEIFFCTMGPLEVREV
Ga0070694_1004450711	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MEARVTAHSQSYRLRERMKEAEVQHGQEIRADLPGIRVASYGGEWFSARRKSTGEVFFCTMGPIRVRKV
Ga0070708_1013280671	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MEARVTAYSQADRLREGMEKAAVRHGQEIRADLPGIRVVARARNWFTARDTKGEVLFCTMGPIRVR
Ga0070708_1015788541	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MEARVTAHSQASRLRERMKEAEIQHGQEIRADLPGIRVASYGGEWFTARRKTSGEVFFCTMGPIRVRRVTISGDGHSLPTN
Ga0070708_1018785241	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MEARVTGYSQAERLRERMEKAAVQHGQEIRADLPGIRVVAGARNWFRPRDPRWGEVFFCTMGPVRVREVANPGDERPLPTRVVLEGLAVPDAGTYD
Ga0070706_1005378573	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MEARVTAYSQAHRLRERMAQAEVQHGQELRADLPGIGVTAMARDWFTGRHTAKGQVLFCTMGPIRVR
Ga0070707_1017898011	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MEARVTAHSQAYRLKERMTQAEVKHGQEIRADLPGIGVMATTREWFTARHRGKGEVFFCTMGPIRVREVTVPGDGG
Ga0070704_1004485712	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	LRERMAQAEVRHGQEIRADLPGIRVTAMGRNWFTGRPTGKGEVFFCTMGPIRVRETTTPGDGGPLPENVVVQGLEVPIDGTYDLIDVLV
Ga0066698_103478712	3300005558	Soil	MEARVTAHSQASRLRERMAQAEVQHGQEIRADLPGIGVLAMARDWFT
Ga0075287_10535211	3300005873	Rice Paddy Soil	MQARVTAASQTYRLRERMEKAAVEHGQEIRADLPGVRVMSMARDWLTLRPHATGEVFFCTMG
Ga0081455_104956581	3300005937	Tabebuia Heterophylla Rhizosphere	MEARVTAYSQAYRLRERMAQAEVKHGQEIRADLPGIRVTALARDWFFTRHKHRGEVFFCTMGPIQVREVATPGDGAPLPNEVV
Ga0066659_109171293	3300006797	Soil	MEARVTAYSQAHRLRERMAQAEVQHGQEIRADLPGIGVTAMGRDWFTARHTGK
Ga0075434_1017576251	3300006871	Populus Rhizosphere	MEARVTGYSQAERLRERMEKAAVQHGQEIRADLPGIRVVAGARNWFRPRDPRWGEVFFCTMGPVRVREVANPGDERPLPTRVVLEG
Ga0079215_116317941	3300006894	Agricultural Soil	MEARVTAHSQADRLRERMAQAKVRHGQEIRADLPGIGVTAMACDWFPARDKSKGEVFFCTMGPIRLRKVAIEGDGGPLPADTIVEGLE
Ga0075436_1013780921	3300006914	Populus Rhizosphere	MEARVTSYSQTERLRERMEKASVRHGQEIRADLPCVRVAASPRNWFVSRAKHKGEIFFCTMGPLEVRE
Ga0075435_1015260191	3300007076	Populus Rhizosphere	MEARVTAYSQAHRLRERMAQAEVQHGQEIRADLPGIGVTAMARDWFTARHTGKGQVLFCTMGPIRVRKVTIP
Ga0099829_111369101	3300009038	Vadose Zone Soil	MEARVTAYSQADRLRERMEEAEVRHGQEIRADLPGIRVMALARNWFTARDKRKGEVL
Ga0099830_103668291	3300009088	Vadose Zone Soil	MEARVTGYSQVERLRERIEQAEVRHGQEIRADLPGVRVIAMARNWFKPKDQRQGEILFCTMGPVRVREVTMP
Ga0099828_100858661	3300009089	Vadose Zone Soil	MEARVTAYSQADRLREGMENAAVQHGQEIRADLPGIRVMALARNWFTARDKRKGEVLFCTMGPIRVRK
Ga0099828_105066201	3300009089	Vadose Zone Soil	MEARVTGYSQVERLRERVEQAEVRHGQEIRADLPGIRVMALARNWFTARDKRKGEVLFCTMGPIRVRKVTIPG
Ga0105092_102092061	3300009157	Freshwater Sediment	SQAHRLRERMAQAEVQHGQEIRADLPGIGVIATGRDWFTARHDAKGEVFFCAMGPIRVCGR*
Ga0075423_112767152	3300009162	Populus Rhizosphere	MEARVTAHSQAYRLRERMKEAEIQHGQEIRADLPGIRVASYGGEWFIAKRKTSG
Ga0105071_10865272	3300009808	Groundwater Sand	MEAHVTAHSQAYRLRERMAQTEVTHGQEIRADLPGIRVTAMARSWFTARDRERGEVLFCTMGPIRVRKV
Ga0126304_101793721	3300010037	Serpentine Soil	MEARVTSYSQSERLRERMAQAEVRHGQEIRADLPGIRVEAMGRNWFIGKPSRHGVVFFCTMGPIT
Ga0126304_102628522	3300010037	Serpentine Soil	MEARVTSYSQSEQLRERMAQADVRHGQEIRADLPGIRVEAMGRNWFIGKPSRHGVVFFCTMGPIT
Ga0126315_107674591	3300010038	Serpentine Soil	MEARVTAYSQAHQLRERMAQAEVKHGQEIRADLPGIRVTAMGRHWFSGRPSGKGEVFF*
Ga0138514_1000192732	3300011003	Soil	MEAHVTAYSQAHRLRERMAQAEVRHGQEIRADLPGIRVTAMGRNWFTGRPTGKGEVFFCNMASIRVRGTTTPGDGGP
Ga0137389_105401601	3300012096	Vadose Zone Soil	MEARVTAYSQADRLREGMENAAVQHGQEIRADLPGIGVTAMARDWFTARHTGKGEVYFCTMGPIGVRKVTVPGDGGP
Ga0137365_109529771	3300012201	Vadose Zone Soil	MAQAEVQHGQEIRADLPGIGVLALARDWFTARHKGKGEVFFCTMGPIRVREVMVPGDGGPLPSDVVVEGLEVASDGSYDLLNVLV
Ga0137377_106867081	3300012211	Vadose Zone Soil	MEARVTANSQAYRLRERMAQAKVEHGQEIRADLPGIGVLAMARDWFSAGHRGKGEVYF
Ga0137385_110567021	3300012359	Vadose Zone Soil	MEARVTAHSQAYRLRERMAQAEVQHGQEIRADLPGIGVTAMARDWFTARHTGKGQVLFCT
Ga0150984_1083370452	3300012469	Avena Fatua Rhizosphere	MAQADVKHGQEIRADLPGINVTTLARDWFFARRKPRGEVFFCTMGPIRVREVTAPGDGAPLPTEVIVEGLEVAMGGT
Ga0137407_107943821	3300012930	Vadose Zone Soil	MEARVTAHSQAYRLRERMKEAEIQHGQEIRADLPGIRVASYGGEWFTARRKTSGEVFFCTMGP
Ga0164303_114055981	3300012957	Soil	MEARVTGYSQVERLRERIEQAEVRHGQEIRADLPGVRVIAIARNWFRPKEQRQGEILFCTMGPVRVREVTIPGDALPLPTKVVVQGLVVPGEGRYDLLD
Ga0164305_116271391	3300012989	Soil	MEARVTAYSQAHRLRERMAQAEVQHGQEIRADLPGIGVTAMARDWFTARHTGKGQVLFCTMGPIRVRKVTIPGD
Ga0120158_104308911	3300013772	Permafrost	MEARVTANSQAYRLRERMAQAKVQHGQEIRADLPGIGVIPMGRDWFTARHTGKGEVFFCAMGPI
Ga0134069_12711772	3300017654	Grasslands Soil	GMEARVTAHSQAYRLRERMEQAEVQHGQEIRADLPGIGVTATARGWFAAPPI
Ga0187824_103796431	3300017927	Freshwater Sediment	MEARVTGYSQAERLRLRIEQANVRHGQEIRADLPGIRVVAMAGSWFTRRSRRKGEILFCNMGPIRVREVTTPGDGLPLPGRVVVEGLVVP
Ga0184610_10934503	3300017997	Groundwater Sediment	MEARVTAYSQAHRLRERMEQAEVRHGQEIRADLPGIRVTAMSRNWVTGRPNGNGEVFFCSMGPIRVREVKAAGDGAPLPNNVI
Ga0184610_12679132	3300017997	Groundwater Sediment	MEARVTAHSQADRLRERMAQAKVQHGQEIRADLPGIGVVALARDWFTGRHRGKGEVYFCTMGPIRV
Ga0184605_104778392	3300018027	Groundwater Sediment	METRVTAHSQAYRLRERMEQAEIKHGQEIRADLPGIGVTAMARDWFTARHKGKGEVYFCTMG
Ga0184608_101042141	3300018028	Groundwater Sediment	MQAHVTAHSQAYRLRERMAQAKVEHGQEIRADLPGIGVTTMAGDWFTARHKGKGEVYFCTMGPIRVRTVTVPGDGGPLPTHVVVEGLEVASGGSYDLLNV
Ga0184608_101364372	3300018028	Groundwater Sediment	MEAHVSSYSQTHRLRERMAEADVRHGQEIRADLPGIRVTAMSHHWFTGRPIGNSEVFFCTMGPVRVREVKATGDGAPLPHNVIVQGLEVANEGTYDLIDALVQSNG
Ga0184608_101793831	3300018028	Groundwater Sediment	MEAHVTAYSQAHRLRERMAQAEVQHGQEIRVDLPGIRVTAMGRNWFTGRPTGKGEVFFCTMGPVRVREVKATGDGAPLPHNVIVQGL
Ga0184620_100490321	3300018051	Groundwater Sediment	MEAHVTAYSQAHRLRERMAQAEVRHGQEIRADLPGIRVIAMGRNWFTGRPTGKSEVFFCNMGPIRVRETTTPGDGGPLPENVVVQGLDVAGDGTYDLIDV
Ga0184620_102879301	3300018051	Groundwater Sediment	MEAHVSSYSQTHRLRERMAEAEVRHGQEIRADLPGIRVTAMSHHWFTGRPIGNSEVFFCTMGPVRVREVKATGDGAPLPHNVIVQGLEVADEGTYDLIDALV
Ga0184626_104542321	3300018053	Groundwater Sediment	MQAHVTAHSQAYRLRERMAQAKVQHGQEIRADLPGIGVTAMARDWFPARDKGKGEDFF
Ga0184623_100031718	3300018056	Groundwater Sediment	MEARVTAYSQAHRLRERMEQAEVRHGQEIRADLPGIRVTAMSHNWFTGRPLGNGEVFFCSMGPIRVREVKAAGDGAPLPNNVIVQGLEVQG
Ga0184632_100983932	3300018075	Groundwater Sediment	MEARVTAHSQADRLRERMAQAKVRHGQEIRADVPGIRVMAMAREWFTARHRGKGEVFFCTMGPIRVREVTV
Ga0184609_101057932	3300018076	Groundwater Sediment	MEAHVSSYSQTHRLRERMAEAEVRHGQEIRADLPGIRVTAMSHHWFTGRPIGNSEVFF
Ga0184609_101707943	3300018076	Groundwater Sediment	MQAHVTAHSQAYRLRERMAQAEVQHGQEIRADLPGIGVIAMVRDWFTARHKGKGEVFFCTMGPIRVREVTVPGDGGPLPSDVVVEGLEVA
Ga0184609_102692712	3300018076	Groundwater Sediment	MQAHVTAHSQAYRLRERMAQAKVQHGQEIRADLPGIGVTALDRGWFTARHDAKGEVFFC
Ga0184609_103350051	3300018076	Groundwater Sediment	MEARVTAYSQAHRLRERMEQAEVRHGQEIRADLPGIRVTGVTRNWFTGRPNGKGEVF
Ga0184609_103898641	3300018076	Groundwater Sediment	MEAHVTAYSQADRLRERMAQAEVRHGQEIRADLPGIRVIAMGRNWFTGRPTGKGEVFFCTMGPIRVRETTTPGDEGPLPENVVVQGLEVAIDGTYDLIDVLV
Ga0184633_102990531	3300018077	Groundwater Sediment	MEARVTAHSQADRLRERMAQAEVQHGQEIRADLPGIGVIAMGRDWFTARHTGKGEV
Ga0184612_101296971	3300018078	Groundwater Sediment	MEARVTAHSQAYRLRERMAQAKVQHGQEIRADLPGIGVMAMAREWFTARHRGKGEVF
Ga0190272_104230711	3300018429	Soil	MEARVTAYSQAHQLRERMAQAEVRHGQEIRADLPGIRVTATSRNWLTGRPNGDGQVFFCTMGPVRVREVKAVGDGAPLPSNVIVLGLEVTGEGTYDLI
Ga0190269_116255001	3300018465	Soil	MEAHVTAHSQAYRLRERMAQAKVHHGQEIRADVPGIRVVAMAREWFTARHKGKGEVFFCTMGPIRVRKVAISGDGGPLPTDVVVEGLEVANVGTYDLLNV
Ga0184641_12538231	3300019254	Groundwater Sediment	MEAHVTAYSQADRLRERMAQAEVRHGQEIRVDLPGIRVTAMGRNWFTGRPTGKGEVFFCTMGPVRVRET
Ga0184646_11095661	3300019259	Groundwater Sediment	MQAHVTAHSQADRLRERMTQAKVQHGQEIRADVPGVRVMAMAREWFTARYRGKGEVFFCTTGPIRVREVAVPGDGGPLPSTVVVEGLEVASGGSYDLLNVLVQSN
Ga0184646_13734342	3300019259	Groundwater Sediment	MEARVTAYSQAHRLRERMEQAEVQHGQEIRADLPGIRVTAISHNWFTGRPLGNGEVFFCGMGPIRVREVKAAGDGAPLPNNVIVQGLEVL
Ga0193719_102649842	3300021344	Soil	MEAHVSSYSQTHRLRERMAEAEVRHGQEIRADLPGIRVTAMSHHWFTGRPIGNSEVFFCTMGPVRVREVKATGDGAPLPHNVIVQGL
Ga0193750_10372851	3300021413	Soil	MEAHVTAYSQAHRLRERMAQAEVRHGQEIRADLPGIRVTAMGRNWLTGRPTGKGEVFFCTMGPVRVLET
Ga0210061_10650811	3300025537	Natural And Restored Wetlands	MQARVTAASQTYRLRERMEKAEVEHGQEIRADLPGVRVMAMGRDWLTLRPQPVGEVFFCTMGPVRVRKQTIAGDGRTLPVGV
Ga0207671_106285742	3300025914	Corn Rhizosphere	MEARVTSYSQTERLRERMEKASVRHGQEIRADLPGVRVAASPRNWFVSRAKHKGEIFFCTMGPREVREVVSPGDDRP
Ga0207665_111689201	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MEARVTANSQAHRLKERMEEAEVRHGQEIRADLPGIRVRAFAGAWLGAREVGKGEVFFCNMGPIRL
Ga0208777_10221631	3300025996	Rice Paddy Soil	MQARVTAASQTYRLRERMEKAAVEHGQEIRADLPGVRVMSMARDWLTLRPHATGEVF
Ga0209874_11011251	3300027577	Groundwater Sand	MEARVSAYSQAHRLRERMAHAKVEHGQEIRADLPGIRVVAMAGEWFTARHRGKGEVFFCTMGPIRVRKVAVS
Ga0214468_11373551	3300027647	Soil	MQARVTAYSQAERLRERMAQAEVRHGQEVRADLPGIRVSAMGRHWFTGRPNDKGEVFFCTMGPIQVRETTVPGDGGPLPSHVIVEGLEIAADGTYDLI
Ga0209180_100711831	3300027846	Vadose Zone Soil	MEARVTGYSQVERLRERVEQAEVRHGQEIRADLPGIRVMALARNWFTARDKRKGEVLFCTMGPIRVRKVTSPGDG
Ga0209283_103038823	3300027875	Vadose Zone Soil	MEARVTGYSQVERLRERVEQAEVRHGQEIRADLPGIRVMALARNWFTARDKRKGEVLFCT
Ga0209590_104821801	3300027882	Vadose Zone Soil	MKARVTARSQTYRLRERMEQAQVRHGEEIRADLPGIRVIATGGTWFSARRNADGEVYFCTMGPVRVRKVAISGDGRP
Ga0272482_100424942	3300028578	Soil	MQARVTAYSQAERLRERMAQAEVRHGQEVRADLPGIRVSAMGRHWFTGRANDKGEVFFCTMGPIQVRETTVPGDG
Ga0247822_113513101	3300028592	Soil	MEARVTAYSQAHRLRERMAQAEVQHGQEIRADLPGIGVTTIARDWFTA
Ga0307293_100777583	3300028711	Soil	MEARVTAHSQADRLRERMAQAKVQHGQEIRADVPGIRVLAMAREWFTARHRGKGEVFFCTMGPIRVREVTVPGD
Ga0307282_102155141	3300028784	Soil	MEARVTAHSQASRLRERMAQAEVQHGQEIRADLPGIGVLALARDWFTARHKGKGEIF
Ga0307282_105104281	3300028784	Soil	MQAHVTAHSQAYRLRERMAQAKVEHGQEIRADLPGIGVTAMARDWFTARHKGKGEVYFCTMGPIGVREVTVPGDGGPLPTDAIV
Ga0307299_103764631	3300028793	Soil	MEAHVTAYSQADRLRERMAQAEVRHGQEIRADLPGIRVTARGRNWFTGRPTGKGEVFFCTMGPVRVRETTTPGDGGPLPENVVLQGLE
Ga0307296_102873901	3300028819	Soil	METRVTAHSQAYRLRERMEQAEIKHGQEIRADLPGVGVVAMARDWFTGRSRGKGQVFFCT
Ga0307310_101403902	3300028824	Soil	MEAHVTAYSQAHRLRERMAQAEVRHGQEIRADLPGIRVIAMGRNWFTGRPTGKGEVFFC
Ga0307312_100302695	3300028828	Soil	MEAHVTAYSQADRLRERMAQAEVRHGQEIRADLPGIRVTAMGRNWFTGRPTGK
Ga0307312_106172842	3300028828	Soil	MEAHVTAYSQAHRLRERMAQAEVRHGQEIRADLPGIRVIAMGRNWFTGRPTGKGEVFFCTMGP
Ga0307312_108753611	3300028828	Soil	MEAHVSSYSQTHRLRERMAEAEVRHGQEIRADLPGIRVTAMSHHWFTGRPIGNSEVFFCTMGPVRVREVKATGDGAPLPHNVIVQGLEVANE
Ga0307278_105487771	3300028878	Soil	MEARVTAHSQAYRLRERMAQAEVQHGQEIRADVPGIRVLAMAREWFTARHRGKGEVFFCTMGPIRVREVTVPGDGSSLPSNVVVEGL
Ga0307304_104665132	3300028885	Soil	MEARVTAHSQAYRLRERMAQAKVQHGQEIRADVPGIRVMAMAREWFTARHRGKGEVFFCTMGPIRVREVTVP
Ga0299907_103028822	3300030006	Soil	MQARVTAYSQAERLRERMAQAEVRHGQEVRADLPGIRVSAMGRHWFTGRANDKGEVFFCTMGPIQVRETTVPGDGRPLPSHVIVE
Ga0299907_107119992	3300030006	Soil	MEARVTAHSQAFRLRERMRQAEIQHGQEIRADLPGVKVSAAVSAWLGTRQGGKGDVFFCNMG
Ga0268386_101128923	3300030619	Soil	MEARVTAHSQAFRLRERMEQAQVRHGQEMRADLPGIRVRAMAGPWLGTTQGSKGEVFFC
Ga0302046_101738931	3300030620	Soil	MQAHVTAHSQAYRLKERMAQAKVQHGQEIRADLPGIGVTALDRGWFTARHDAKGEV
Ga0302046_111293312	3300030620	Soil	MEARVTAYSQAHRLRERMEQAEVRHGQEIRADLPGIRVIAMSHNWFTGRPSGNSEVFFCSMGPIRVREVKAAGDGAP
Ga0308205_10652811	3300030830	Soil	METRVSAHSQADQLRERMAQAKVEHGQEIRADLPGIRVVAMAGEWFTARYKDKGEVFFCTMGPIRVRKVAVSGDGGPLPTDVVVEGL
Ga0308206_10947232	3300030903	Soil	MEAHVTAYSQAHRLRERMAQAEVRHGQEIRADLPGIRVTATGRWFTGRPTGKGEVFFCTMGPIRVRETTTPGDGGPLPENVVVQGL
Ga0308197_101581161	3300031093	Soil	MEAHVTAYSQAHRLRERMAQAEVRHGQEIRADLPGIRVTATGRWFTGRPTGK
Ga0308199_11830892	3300031094	Soil	MEARVTAHSQAYRLRERMEQAEVKHGQEIRADLPGIGVMATAREWFTARH
(restricted) Ga0255312_10647531	3300031248	Sandy Soil	MEARVTAYSQADRLREGMEKAAVQHGQEIRADLPGIRVVASARNWFTAGNKGKGEVFFCAMGPIRVREVTSPGDGRPLPTTVTLEGLVVPSPGAYDLLNTLV
Ga0308194_102805101	3300031421	Soil	MEARVTAHSQASRLRERMAQAEVQHGQEIRADLPGIGVLALARDWFTARHK
Ga0308179_10132352	3300031424	Soil	MEAHVTAYSQAHRLKERMVQAEVRHGQEIRADLPGIRVIAMGRNWFTGRPTGKSEVFFCN
Ga0307407_111660071	3300031903	Rhizosphere	MQAHVTAASQTYRLRERMEKAEVRHGQEIRADLPGVRVMAMGRDWLSLRPHPAGEVFFCTMGQVRV
Ga0307412_108503082	3300031911	Rhizosphere	MEARVTSYSQGYRLRERMEEAEVRHGQEIRADLPGIRVTAMGRHWFTGRALDKGEVFFCNMGPITVKETST
Ga0307411_114230331	3300032005	Rhizosphere	MQAHVTAASQTYRLRERMEKAEVRHGQEIRADLPGVRVMAMGRDWLSLRPHPAGEVFFCTMGQVRVRKESIAGDGRAL
Ga0310890_111702231	3300032075	Soil	MEARVTAYSQAHRLRERMAQAEVQHGQEIRADLPGIGVTTMARDWFTAGHTGKGQVFFCTMGPIRVRKVTIPGDGGPLPTDAIVEGLEVASGGTYDLL
Ga0307472_1016715091	3300032205	Hardwood Forest Soil	MEARVTGYSQVERLRERVEQAEVQHGQEIRADLPGIRVMALARNWFAARDNRKGEVLFCTMGPIRVRKVASPGD
Ga0310812_104852681	3300032421	Soil	MEARVTSYSQAERLRERMEKASVRHGQEIRADLPGIRVAASPRNWFVSRTKHKGEIFFCTMGPLEVREVVSSGDDEPLPTTAV
Ga0310810_113187582	3300033412	Soil	MEARVTSYSQAERLRERMQKAAIRHGQEIRADLPGIRVAASPRNWFVRRTNHKGE
Ga0373912_0243295_269_502	3300034088	Sediment Slurry	MEARVTASSQTDRLREGMEKAEVQHGQEIRADLPGVRVVASAPKWLTAGDKGKGDVFFCAMGPIRVRQVTSPGDGRPL
Ga0364934_0352000_243_557	3300034178	Sediment	METRVSAHSQAYQLRERMAQAKVEHGQEIRADLPGIRVVAMAREWFTARHNKGEVFFCTMGPIRVRKVAVSGDGGPLPADVVVEGLEVANVGTYDLLNVLVRSNG
Ga0364934_0402309_1_225	3300034178	Sediment	MEAHVTAYSQADRLRERMAQAKVQHGQEIRADLPGIRVTAIGRNWLTGRPNGKGDVFFCTMGPIRVRETTTPGDG
Ga0370548_022118_729_980	3300034644	Soil	MAQAKVEHGQEIRADLPGIGVTTMAGDWFTARHRGKGEVYFCTMGPIGVREVTVPGDGGPLPTDAIVEGLEVASVGTYDLLNVP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters