NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F086231

Metagenome / Metatranscriptome Family F086231

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F086231
Family Type Metagenome / Metatranscriptome
Number of Sequences 111
Average Sequence Length 86 residues
Representative Sequence MRLKIASALLFAATLTGSALAQAPAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRTIK
Number of Associated Samples 100
Number of Associated Scaffolds 111

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 71.17 %
% of genes near scaffold ends (potentially truncated) 22.52 %
% of genes from short scaffolds (< 2000 bps) 91.89 %
Associated GOLD sequencing projects 93
AlphaFold2 3D model prediction Yes
3D model pTM-score0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (90.090 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(14.414 % of family members)
Environment Ontology (ENVO) Unclassified
(36.937 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(63.063 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 5.31%    β-sheet: 30.09%    Coil/Unstructured: 64.60%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.53
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 111 Family Scaffolds
PF012572Fe-2S_thioredx 42.34
PF05050Methyltransf_21 14.41
PF00346Complex1_49kDa 11.71
PF01512Complex1_51K 4.50
PF14451Ub-Mut7C 0.90
PF01058Oxidored_q6 0.90
PF00507Oxidored_q4 0.90

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 111 Family Scaffolds
COG1905NADH:ubiquinone oxidoreductase 24 kD subunit (chain E)Energy production and conversion [C] 42.34
COG0649NADH:ubiquinone oxidoreductase 49 kD subunit (chain D)Energy production and conversion [C] 11.71
COG3261Ni,Fe-hydrogenase III large subunitEnergy production and conversion [C] 11.71
COG1894NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit (chain F)Energy production and conversion [C] 4.50
COG4656Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfC subunitEnergy production and conversion [C] 4.50
COG0377NADH:ubiquinone oxidoreductase 20 kD subunit (chain B) or related Fe-S oxidoreductaseEnergy production and conversion [C] 0.90
COG0838NADH:ubiquinone oxidoreductase subunit 3 (chain A)Energy production and conversion [C] 0.90
COG1740Ni,Fe-hydrogenase I small subunitEnergy production and conversion [C] 0.90
COG1941Coenzyme F420-reducing hydrogenase, gamma subunitEnergy production and conversion [C] 0.90
COG3260Ni,Fe-hydrogenase III small subunitEnergy production and conversion [C] 0.90


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms90.09 %
UnclassifiedrootN/A9.91 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000956|JGI10216J12902_102440897All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium842Open in IMG/M
3300002568|C688J35102_118956483All Organisms → cellular organisms → Bacteria → Proteobacteria618Open in IMG/M
3300003324|soilH2_10226775All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1393Open in IMG/M
3300004114|Ga0062593_101837401All Organisms → cellular organisms → Bacteria667Open in IMG/M
3300004156|Ga0062589_100766039All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae868Open in IMG/M
3300004157|Ga0062590_100418055All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1107Open in IMG/M
3300004157|Ga0062590_101453736All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → Methylovirgula ligni685Open in IMG/M
3300004463|Ga0063356_101903189All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae897Open in IMG/M
3300004643|Ga0062591_100168907All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1557Open in IMG/M
3300005093|Ga0062594_101191658All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Undibacter → Undibacter mobilis754Open in IMG/M
3300005329|Ga0070683_101736306All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → Methylovirgula ligni600Open in IMG/M
3300005331|Ga0070670_100147622All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2035Open in IMG/M
3300005338|Ga0068868_102140078Not Available532Open in IMG/M
3300005356|Ga0070674_102142512All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → unclassified Rhizobiaceae → Rhizobiaceae bacterium510Open in IMG/M
3300005438|Ga0070701_11216931All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Undibacter → Undibacter mobilis535Open in IMG/M
3300005441|Ga0070700_100882444All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria727Open in IMG/M
3300005456|Ga0070678_102381676Not Available503Open in IMG/M
3300005459|Ga0068867_101804070Not Available575Open in IMG/M
3300005539|Ga0068853_102377511All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria513Open in IMG/M
3300005544|Ga0070686_101911803All Organisms → cellular organisms → Bacteria → Proteobacteria507Open in IMG/M
3300005618|Ga0068864_101475260All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → Methylovirgula ligni683Open in IMG/M
3300005718|Ga0068866_11199241All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → Methylovirgula ligni548Open in IMG/M
3300005840|Ga0068870_11086180All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae575Open in IMG/M
3300006042|Ga0075368_10414877All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales593Open in IMG/M
3300006046|Ga0066652_101968487All Organisms → cellular organisms → Bacteria → Proteobacteria522Open in IMG/M
3300006047|Ga0075024_100086636All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1356Open in IMG/M
3300006050|Ga0075028_100251819All Organisms → cellular organisms → Bacteria → Proteobacteria970Open in IMG/M
3300006051|Ga0075364_11067111All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria549Open in IMG/M
3300006163|Ga0070715_10378406All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales781Open in IMG/M
3300006173|Ga0070716_101355046All Organisms → cellular organisms → Bacteria → Proteobacteria577Open in IMG/M
3300006178|Ga0075367_10181661All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia1312Open in IMG/M
3300006178|Ga0075367_10363506All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → Methylovirgula ligni914Open in IMG/M
3300006178|Ga0075367_11049890Not Available521Open in IMG/M
3300006353|Ga0075370_10174115All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1265Open in IMG/M
3300006581|Ga0074048_12173442All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales678Open in IMG/M
3300006806|Ga0079220_11298176All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales609Open in IMG/M
3300006844|Ga0075428_101636300All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria673Open in IMG/M
3300006881|Ga0068865_100565123All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → Methylovirgula ligni957Open in IMG/M
3300009094|Ga0111539_10780850All Organisms → cellular organisms → Bacteria → Proteobacteria1112Open in IMG/M
3300009094|Ga0111539_12611162All Organisms → cellular organisms → Bacteria586Open in IMG/M
3300009098|Ga0105245_11073826All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales851Open in IMG/M
3300009100|Ga0075418_10369944All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1531Open in IMG/M
3300009100|Ga0075418_11581885All Organisms → cellular organisms → Bacteria → Proteobacteria712Open in IMG/M
3300009148|Ga0105243_10293013All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia1471Open in IMG/M
3300009156|Ga0111538_11671796All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales802Open in IMG/M
3300009176|Ga0105242_10923928All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales874Open in IMG/M
3300009177|Ga0105248_10444034All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1461Open in IMG/M
3300009545|Ga0105237_12119298All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → Methylovirgula ligni571Open in IMG/M
3300009551|Ga0105238_11171197All Organisms → cellular organisms → Bacteria → Proteobacteria793Open in IMG/M
3300009662|Ga0105856_1248106All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae578Open in IMG/M
3300010373|Ga0134128_13044605Not Available515Open in IMG/M
3300010375|Ga0105239_13638552Not Available501Open in IMG/M
3300010397|Ga0134124_10805950All Organisms → cellular organisms → Bacteria → Proteobacteria939Open in IMG/M
3300010399|Ga0134127_12740273All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria573Open in IMG/M
3300010399|Ga0134127_13637944All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → Methylovirgula ligni506Open in IMG/M
3300010400|Ga0134122_10641145All Organisms → cellular organisms → Bacteria → Proteobacteria988Open in IMG/M
3300010403|Ga0134123_11381946All Organisms → cellular organisms → Bacteria → Proteobacteria743Open in IMG/M
3300011119|Ga0105246_11201322All Organisms → cellular organisms → Bacteria → Proteobacteria698Open in IMG/M
3300012212|Ga0150985_107742492All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68603199Open in IMG/M
3300012212|Ga0150985_114124705All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales887Open in IMG/M
3300012901|Ga0157288_10183274All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → Methylovirgula ligni654Open in IMG/M
3300012902|Ga0157291_10327394All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → unclassified Rhizobiaceae → Rhizobiaceae bacterium541Open in IMG/M
3300012909|Ga0157290_10247238Not Available632Open in IMG/M
3300012957|Ga0164303_11140845All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → Methylovirgula ligni566Open in IMG/M
3300012987|Ga0164307_10301170All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes1143Open in IMG/M
3300013296|Ga0157374_11862958All Organisms → cellular organisms → Bacteria → Proteobacteria627Open in IMG/M
3300013306|Ga0163162_10211837All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2068Open in IMG/M
3300013306|Ga0163162_10607730All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → Methylovirgula ligni1219Open in IMG/M
3300013308|Ga0157375_10504679All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes1374Open in IMG/M
3300014326|Ga0157380_12964419All Organisms → cellular organisms → Bacteria → Proteobacteria541Open in IMG/M
3300015372|Ga0132256_103095779All Organisms → cellular organisms → Bacteria → Proteobacteria559Open in IMG/M
3300017965|Ga0190266_11178279Not Available529Open in IMG/M
3300018466|Ga0190268_11165052Not Available635Open in IMG/M
3300018469|Ga0190270_10339045All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1360Open in IMG/M
3300018476|Ga0190274_10377929All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1362Open in IMG/M
3300018481|Ga0190271_10056731All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3374Open in IMG/M
3300018481|Ga0190271_10255118All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68601789Open in IMG/M
3300019377|Ga0190264_10214493All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1077Open in IMG/M
3300019789|Ga0137408_1444539All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2018Open in IMG/M
3300019883|Ga0193725_1137657Not Available538Open in IMG/M
3300020060|Ga0193717_1012393All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68603992Open in IMG/M
3300022889|Ga0247785_1055620All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria507Open in IMG/M
(restricted) 3300023208|Ga0233424_10093899All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp.1308Open in IMG/M
3300025315|Ga0207697_10091265All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1291Open in IMG/M
3300025903|Ga0207680_10889013All Organisms → cellular organisms → Bacteria → Proteobacteria639Open in IMG/M
3300025905|Ga0207685_10318500All Organisms → cellular organisms → Bacteria → Proteobacteria775Open in IMG/M
3300025924|Ga0207694_11691321All Organisms → cellular organisms → Bacteria → Proteobacteria533Open in IMG/M
3300025930|Ga0207701_10827376All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales778Open in IMG/M
3300025931|Ga0207644_10162453All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1737Open in IMG/M
3300025935|Ga0207709_10363392All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1096Open in IMG/M
3300025938|Ga0207704_10340552All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1164Open in IMG/M
3300025944|Ga0207661_11103306All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales731Open in IMG/M
3300025944|Ga0207661_11916915All Organisms → cellular organisms → Bacteria → Proteobacteria538Open in IMG/M
3300025960|Ga0207651_11959964All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → Methylovirgula ligni526Open in IMG/M
3300026067|Ga0207678_11245626All Organisms → cellular organisms → Bacteria → Proteobacteria658Open in IMG/M
3300026067|Ga0207678_11272716All Organisms → cellular organisms → Bacteria → Proteobacteria651Open in IMG/M
3300026089|Ga0207648_11996015All Organisms → cellular organisms → Bacteria → Proteobacteria541Open in IMG/M
3300027835|Ga0209515_10068512All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae2561Open in IMG/M
3300027866|Ga0209813_10347096All Organisms → cellular organisms → Bacteria → Proteobacteria587Open in IMG/M
3300027894|Ga0209068_10121405All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → Methylovirgula ligni1394Open in IMG/M
3300028379|Ga0268266_10221353All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1740Open in IMG/M
3300028380|Ga0268265_10297235All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68601452Open in IMG/M
3300031231|Ga0170824_124990828Not Available521Open in IMG/M
3300031547|Ga0310887_11144443All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → Methylovirgula ligni501Open in IMG/M
3300031716|Ga0310813_10063416All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2765Open in IMG/M
3300031902|Ga0302322_102645445All Organisms → cellular organisms → Bacteria → Proteobacteria619Open in IMG/M
3300031908|Ga0310900_10217614All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1354Open in IMG/M
3300031938|Ga0308175_101230879All Organisms → cellular organisms → Bacteria → Proteobacteria833Open in IMG/M
3300031996|Ga0308176_11079437All Organisms → cellular organisms → Bacteria → Proteobacteria849Open in IMG/M
3300033412|Ga0310810_10084954All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68603804Open in IMG/M
3300033550|Ga0247829_10801039All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp.784Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil14.41%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere6.31%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere6.31%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil5.41%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil5.41%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.41%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil4.50%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.50%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere4.50%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere4.50%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere3.60%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.70%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.80%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere1.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.80%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.80%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.80%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater0.90%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater0.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.90%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.90%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.90%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.90%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.90%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.90%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil0.90%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.90%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.90%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.90%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.90%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.90%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.90%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.90%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.90%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.90%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.90%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.90%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300006042Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3Host-AssociatedOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006047Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006051Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4Host-AssociatedOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006178Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2Host-AssociatedOpen in IMG/M
3300006353Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5Host-AssociatedOpen in IMG/M
3300006581Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009662Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012901Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1EnvironmentalOpen in IMG/M
3300012902Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1EnvironmentalOpen in IMG/M
3300012909Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300019883Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2EnvironmentalOpen in IMG/M
3300020060Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2EnvironmentalOpen in IMG/M
3300022889Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S096-311B-4EnvironmentalOpen in IMG/M
3300023208 (restricted)Freshwater microbial communities from Lake Towuti, South Sulawesi, Indonesia - Watercolumn_Towuti2014_125_MGEnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027835Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 m (SPAdes)EnvironmentalOpen in IMG/M
3300027866Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027894Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031902Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_10244089723300000956SoilMIRIAVVAAATILAGSALAQDKPSVAKYLGDGYEVIRSEIGNPFLQFILAKKTATGQTLVWCSVQVQTGETSSCRVIK*
C688J35102_11895648313300002568SoilMRLKIASALLFAAALNGSALAQAPVPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTATGQVLVWCSVQVQTGETSSCRTIK*
soilH2_1022677513300003324Sugarcane Root And Bulk SoilMRSKIAAALVFATALTGTAFAQTPAPADKPTVGKYLADGYTVLRADIGNPFLQFILQKSTASGQALVWCSVQVQTGETSSCRTIK*
Ga0062593_10183740123300004114SoilMRSKIVATLIFASAALTGAAFAQSPAPADKPTVGKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRAIK*
Ga0062589_10076603923300004156SoilMRLRIAAGLIFAAAAVAGTASAQTPAPADKPTVGKYLADGYTVQRSEIGNPFLQFILQKSTPSGQVLVWCSVQLQTGETSSCRTIK*
Ga0062590_10041805523300004157SoilMKLKVASALMFVTALGGTAFAQAPAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRTIK*
Ga0062590_10145373623300004157SoilMRLRIAAGLIFAAAAVAGTASAQTPAPADKPTVGKYLADGYTVQRSEIGNPFLQFILQKSTPSGQVLVWCSVQLQTGETS
Ga0063356_10190318923300004463Arabidopsis Thaliana RhizosphereMIISKLLAAALLAGFASSALAQAQAQADKPTVGKYLADGYEVERAEIGNPFLQFILQKKTASGQVLVWCSVQVQTGETSSCRTIR*
Ga0062591_10016890723300004643SoilMKLKVASALMFVTALGGTAFAQAPAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTATGQVLVWCSVQVQTGETSSCRTIK*
Ga0062594_10119165823300005093SoilMTISKLLAAALIVGSASAAFAQAQAPANKPTVGKFLADGYEVLQSEIGNPFLQFILHKKTATGQVLVWCSVQVQTGETSSCRTIK*
Ga0070683_10173630623300005329Corn RhizosphereMKLKLIAPLIFAAAALAGPANAQTPAADKPTVGKYLADGYTVQRSEIGNPFLQFILQKSTASGQALVWCSVQVQTGETSSCRTIK*
Ga0070670_10014762233300005331Switchgrass RhizosphereMFVTALGGTAFAQAPAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRTIK*
Ga0068868_10214007813300005338Miscanthus RhizosphereMKLKLIAPLIFTAAALAGPANAQTPAADKPTVGKYLADGYTVQRSEIGNPFLQFILQKSTASGQTLVWCSVQVQTGETSSCRTIK*
Ga0070674_10214251213300005356Miscanthus RhizosphereMKLKIAAALMFTAGAFADAALAQAPAPADKPTVGKYLAEGYTVQRSDIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRAIK*
Ga0070701_1121693113300005438Corn, Switchgrass And Miscanthus RhizosphereAAALAGTASAQTLAPADKPTVGKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRTIK*
Ga0070700_10088244423300005441Corn, Switchgrass And Miscanthus RhizosphereMTISKLLAAALIVGSASAAFAQAQAPANKPTVGKFLADGYEVLQSEIGNPFLQFILHKKTATGQVLVWCSVQVQTGETSSCRAIK*
Ga0070678_10238167623300005456Miscanthus RhizosphereMRLRIAPVLVFAAALAGTASAQTPAPADKPTVGKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTRTCPDAVDFCRMNCRN
Ga0068867_10180407013300005459Miscanthus RhizosphereMRLKIAAALAFVTATLVGTASAQTPAPADKPAVGKYLADGYTVLHADIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRTIK*
Ga0068853_10237751113300005539Corn RhizosphereVRHQQPVLGRKDQVDSAIDKSLMASHLDGRPMRLRIAAGLIFAAAAVAGTASAQTPAPADKPTVGKYLADGYTVQRSEIGNPFLQFILQKSTPSGQVLVWCSVQLQTGETSSCRTIK*
Ga0070686_10191180323300005544Switchgrass RhizosphereMKLKVASALMFATALGGTAFAQAPAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRTIK*
Ga0068864_10147526023300005618Switchgrass RhizosphereMRLKIASALLFATALTGAALAQTAAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKKTAAGIVLVWCSVQVQTGETSSC
Ga0068866_1119924113300005718Miscanthus RhizosphereMRLKIASALLFAATLTGSALAQAPAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWC
Ga0068870_1108618023300005840Miscanthus RhizosphereMTISKRLAAALIVGSASAAFAQAQAPANKPTVGKFLADGYEVLQSEIGNPFLQFILQKKTASGQVLVWCSVQVQTGETSSCRTIK*
Ga0075368_1041487723300006042Populus EndosphereMGLKMTSALLFTAALAGSAMAQAPAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRTIK*
Ga0066652_10196848713300006046SoilLGRKDQVDPAVDTSLMASHLEDCPMRLKIASALLFAAALNGSALAQAPVPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTATGQVLVWCSVQVQTGETSSCRTIK*
Ga0075024_10008663623300006047WatershedsMTLKIAAASLLAAFAFAGSALAQTPAPADKPTVGKYLADGYTVQKSEIGNPFLQFILQKGTASGQVLVWCSVQVQTGETSSCRTIK*
Ga0075028_10025181913300006050WatershedsAIDASLMASHLEDSSMTLKIAAASLLAAFAFAGSALAQTPAPADKPTVGKYLADGYTVQKSEIGNPFLQFILQKGTASGQVLVWCSVQVQTGETSSCRTIK*
Ga0075364_1106711123300006051Populus EndosphereMTLKIAPALLLVTALAGPALAQTPAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRTIK*
Ga0070715_1037840623300006163Corn, Switchgrass And Miscanthus RhizosphereMKLKVASALMFATALGGTAFAQAPAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTATGQVLVWCSVQVQTGETSSCRTIK*
Ga0070716_10135504613300006173Corn, Switchgrass And Miscanthus RhizosphereLGRKDQVDPAVDTSLMASHLEDCPMRLKIASALLFAATLTGSALAQAPAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTATGQVLVWCSVQVQTGETSSCRTIK*
Ga0075367_1018166133300006178Populus EndosphereMTLKIASALLLIAALTGTASAQAPAPADKPTVGKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRTIK*
Ga0075367_1036350623300006178Populus EndosphereMRLKMTSALLFTAALAGSAMAQAPAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRVIK*
Ga0075367_1104989013300006178Populus EndosphereFASALLFTAALTGSAWAQAQAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRTIK*
Ga0075370_1017411513300006353Populus EndosphereMTLKIASALLLITALTGAAFAQAPAAADKPTVGKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRTIK*
Ga0074048_1217344223300006581SoilMTLKIASALLFAAALTGSALAQTPALADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTATGQVLVWCSVQVQTGETSSCRTIK*
Ga0079220_1129817623300006806Agricultural SoilMRLQIASALLFATAVTGSALAQAPAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTATGQVLVWCSVQVQTGETSSCRTIK*
Ga0075428_10163630023300006844Populus RhizosphereMKTIIGVAATLLVTWMSSAALAQAPADKPTVAKYLADGYEVLRAEIGNPFLQFILAKKTASGQVLVWCSVQVQTGETSSCRTIK*
Ga0068865_10056512323300006881Miscanthus RhizosphereMRLKIASALLFAATLTGSALAQAPAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRTIK*
Ga0111539_1078085023300009094Populus RhizosphereMSGAALAQAPADKPTVAKYLADGYEVLRAEIGNPFLQFILAKKTASGQVLVWCSVQVQTGETSSCRTIK*
Ga0111539_1261116223300009094Populus RhizosphereMTISKLLADALIVGSASAAFAQAQAPANKPTVGKFLADGYEVLQSEIGNPFLQFILQKKTGAGQVLVWCSVQVQTGETSSCRTIK*
Ga0105245_1107382623300009098Miscanthus RhizosphereMASHLEDCPMRLKIASALLFAATLTGSALAQAPAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRTIK*
Ga0075418_1036994423300009100Populus RhizosphereMTVSKLLAAALLAASASATFAQAQAPADKPTVGKYLADGYEVLQSEIGNPFLQFILHKKTASGQVLVWCSVQVQTGETSSCRTIK*
Ga0075418_1158188523300009100Populus RhizosphereMKTITGVAAALLVTWMSGAALAQAPADKPTVAKYLADGYEVLRAEIGNPFLQFILAKKTASGQVLVWCSVQVQTGETSSCRTIK*
Ga0105243_1029301323300009148Miscanthus RhizosphereMRLKIAAALLAALTGAASAQAPAPADKPTVGKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRTIK*
Ga0111538_1167179623300009156Populus RhizosphereMRISKLLAAALLAASASATFAQAQAPADKPTVGKYLADGYEVLQSEIGNPFLQFILHKKTASGQVLVWCSVQVQTGETSSCRTIK*
Ga0105242_1092392823300009176Miscanthus RhizosphereMASHLEDCPMRLKIASALLFAATLTGSALAQAPAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTATGQVLVWCSVQVQTGETSSCRTIK*
Ga0105248_1044403423300009177Switchgrass RhizosphereMKLKVASALMFVTALGGTAFAQAPAPADKPTVAKYLADSYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRTIK*
Ga0105237_1211929823300009545Corn RhizosphereMKLKVASALMFATALGGTAFAQAPAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETS
Ga0105238_1117119713300009551Corn RhizosphereQPFLGRKDQVDPAVDTSLMASHLEDCPMRLKIASALLFAATLTGSALAQAPAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTATGQVLVWCSVQVQTGETSSCRTIK*
Ga0105856_124810623300009662Permafrost SoilMRLKIASALLLATALAGTASAQAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRTIK*
Ga0134128_1304460523300010373Terrestrial SoilMASHLDGRPMRLRIAAGLIFAAAAVAGTASAQTPAPADKPTVGKYLADGYTVQRSEIGNPFLQFILQKSTPSGQVLVWCSVQLQTGETSSCRTIK*
Ga0105239_1363855223300010375Corn RhizosphereMRLRIAPVLVFAAALAETASAQTPAPADKPTVGKYLADGYTVQRSEIGNPFLQFILQKSTASGQTLVWCSVQLQTGETSSCRTIK*
Ga0134124_1080595013300010397Terrestrial SoilMIRNTRLYRALAGTAFAQSPAPADKPSVAKYLADGYTVQKSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRTIK*
Ga0134127_1274027323300010399Terrestrial SoilMRLRIAPVLVFAAALAGTASAQTPAPADKPTVGKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRAIK*
Ga0134127_1363794423300010399Terrestrial SoilMASHLDGRPMRLRIAAGLIFAVAAVAGTASAQTPAPADKPTVGKYLADGYTVQRSEIGNPFLQFILQKSTPSGQVLVWCSVQLQTGETSSCRTIK*
Ga0134122_1064114523300010400Terrestrial SoilMFVTALGGTAFAQAPAPADKPTVAMYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRTIK*
Ga0134123_1138194623300010403Terrestrial SoilMNYSRMTALAFAAALASGTAFAQAPADKPTVAKYLADGYEVVRAEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRTIK*
Ga0105246_1120132223300011119Miscanthus RhizosphereMRLKIAAALLAALTGAASAQAPAPADKPTVGKYLADGYTVQRSEIGNPFLQFILQKSTASGQILVWCSVQVQTGETSSCRTIK*
Ga0150985_10774249233300012212Avena Fatua RhizosphereMASHLEDCPMRLKIASALLFAAALNGSALAQAPVPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTATGQVLVWCSVQVQTGETSSCRTIK*
Ga0150985_11412470523300012212Avena Fatua RhizosphereMTLKLVSTLTLIATALAGSANAQTPAADKPTVGKYLADGYTVQRSEIGNPFLQFILQKSTASGQILVWCSVQVQTGETSSCRTIK*
Ga0157288_1018327423300012901SoilMKLKVASALMFATALGGTAFAQAPAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRAIK*
Ga0157291_1032739413300012902SoilMIISKLLAAALLLGSASAAFAQAQAPAPADKPTVGKYLADGYEVERAEIGNPFLQFILQKKTASGQVLVWCSVQVQTGETSSCRTIR*
Ga0157290_1024723823300012909SoilMIISKLLAAALLAGFASSALAQAQAPADKPTVGKYLADGYEVERAEIGNPFLQFILQKKTASGQVLVWCSVQVQTGETSSCRTIR*
Ga0164303_1114084523300012957SoilMASHLEDCPMRLKIASALLFAAALTGSALAQAPAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTATGQVLVWCSVQVQTGETS
Ga0164307_1030117033300012987SoilKLKIASALMFATTLGGTAFAQAPAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTATGQVLVWCSVQVQTGETSSCRTIK*
Ga0157374_1186295823300013296Miscanthus RhizosphereMTLKIASALLLTTVLAGSAFAQAPAPSDKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRTIK*
Ga0163162_1021183723300013306Switchgrass RhizosphereMASHLEDCPMRLKIASALLFAATLTGSALAQAPAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTATGQVLVWCSVRVQTGETSSCRTIK*
Ga0163162_1060773013300013306Switchgrass RhizosphereMRLKIASALLFATALTGAAVAQTAAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRTIK*
Ga0157375_1050467933300013308Miscanthus RhizosphereLGRKDQVDPAVDTSLMASHLEDCPMRLKIASALLFAATLTGSALAQAPAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRTIK*
Ga0157380_1296441923300014326Switchgrass RhizosphereRLSIAHVLVFAAALEGTASAQTLAPADKPTVGKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRTIK*
Ga0132256_10309577913300015372Arabidopsis RhizosphereHQQPFLGRKDQVDPAVDTSLMASHLEDCPMRLKIASALLFAATLTGSALAQAPAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTATGQVLVWCSVQVQTGETSSCRTIK*
Ga0190266_1117827923300017965SoilMMTSKLFAAALLLGSASAAFAQAQAPADKPTVGKYLADGYEVERAEIGNLFLQFILKKKTASGQVLVWCSVQVQTGETSSCRTIK
Ga0190268_1116505223300018466SoilLGSASAAFAQAQAQAPADKPTVGKYLADGYEVQRAEIGNPFLQFILQKKTASGQVLVWCSVQVQTGETSSCRTIK
Ga0190270_1033904523300018469SoilMIISKLLAAALLAGFASSALAQAQAQADKPTVGKYLADGYEVERAEIGNPFLQFILQKKTASGQVLVWCSVQVQTGETSSCRTIR
Ga0190274_1037792923300018476SoilMMTSKLFAAALLLGSASAAFAQAQAPADKPTVGKYLADGYEVERAEIGNPFLQFILQKKTASGQVLVWCSVQVQTGETSSCRTIK
Ga0190271_1005673143300018481SoilMMTSKLFAAALLLGSASAAFAQAQAPADKPTVGKYLADGYEVERAEIGNPFLQFILQKKTASGQVLVWCSVQVQTGETSSCRNIK
Ga0190271_1025511833300018481SoilMIISKLLAAALLAGFASSALAQAQAPADKPTVGKYLADGYEVERAEIGNPFLQFILQKKTASGQVLVWCSVQVQTGETSSCRTIR
Ga0190264_1021449323300019377SoilMMLSKLLAAALLVGSASAALAQAQAPADKPTVGKYLADGYEVQRAEIGNPFLQFILQKKTASGQVLVWCSVQVQTGETSSCRTIK
Ga0137408_144453923300019789Vadose Zone SoilMKLKIASALLFATGLIGSALAQAPAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRTIK
Ga0193725_113765713300019883SoilMKVLFAAALAVSIATAASAQTQAPADKPTVAKYLADGYTVLRADIGNPFLQFILQKSTATGQVLVWCSVQIQNGETSSCRTIK
Ga0193717_101239333300020060SoilMRSKMRSKIAAALIVATGGLAGNASAQTSPPADKPTVGKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRAIK
Ga0247785_105562023300022889SoilMFVTALGGTAFAQAPAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRTIK
(restricted) Ga0233424_1009389923300023208FreshwaterMKHVKWLALALLTASVTVASAQAPADKPTVGKYLADGYEVLRAEIGNPFLQFILAKKTASGQVLVWCSVQVQTGETSSCRVIK
Ga0207697_1009126523300025315Corn, Switchgrass And Miscanthus RhizosphereMKLKVASALMFVTALGGTAFAQAPAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRTIK
Ga0207680_1088901323300025903Switchgrass RhizosphereMRLKIASALLFAATLTGSALAQAPAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRTIK
Ga0207685_1031850023300025905Corn, Switchgrass And Miscanthus RhizosphereKVASALMFATALGGTAFAQAPAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTATGQVLVWCSVQVQTGETSSCRTIK
Ga0207694_1169132123300025924Corn RhizosphereKIASALLFAATLTGSALAQAPAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTATGQVLVWCSVQVQTGETSSCRTIK
Ga0207701_1082737623300025930Corn, Switchgrass And Miscanthus RhizosphereMRLRIAPVLVFAAALAGTASAQTPAPADKPTVGKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRAIK
Ga0207644_1016245333300025931Switchgrass RhizosphereMRLKIASALLFAATLTGSALAQAPAPADKPTVAKYLADGFTVQRPEIGNPFLQFILQKSTATGQVLVWCSVQVQTGETSSCRTIK
Ga0207709_1036339223300025935Miscanthus RhizosphereMRLKIAAALLAALTGAASAQAPAPADKPTVGKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRTIK
Ga0207704_1034055223300025938Miscanthus RhizosphereMRLKIASALLFAATLTGSALAQAPAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTASGQALVWCSVQVQTGETSSCRAIK
Ga0207661_1110330623300025944Corn RhizosphereMKLKLIAPLIFAAAALAGPANAQTPAADKPTVGKYLADGYTVQRSEIGNPFLQFILQKSTASGQALVWCSVQVQTGETSSCRTIK
Ga0207661_1191691513300025944Corn RhizosphereFATALTGAAVAQTAAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRTIK
Ga0207651_1195996413300025960Switchgrass RhizosphereMKLKVASALMFVTALGGTAFAQAPAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSS
Ga0207678_1124562623300026067Corn RhizosphereMRFKVAAALFAALTGAASAQAPAPADKPTVGKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRTIK
Ga0207678_1127271623300026067Corn RhizosphereMILKLVPALILITAALTGSASAQTPAADKPTVGKYLADGYTVQRSEIGNPFLQFILQKSTASGQALVWCSVQVQTGETSSCRTIK
Ga0207648_1199601523300026089Miscanthus RhizosphereMKLKIAAALILIAGTASAQAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRTIK
Ga0209515_1006851213300027835GroundwaterMTVTKWLAVALMVTSVSAASAQAPADKPTVGKYLADGYEVLRAEIGNPFLQFILAKKTASGQVLVWCSVQVQNGETSSCRTIK
Ga0209813_1034709623300027866Populus EndosphereMGLKMTSALLFTAALAGSAMAQAPAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRTIK
Ga0209068_1012140533300027894WatershedsMTLKIAAASLLAAFAFAGSALAQTPAPADKPTVGKYLADGYTVQKSEIGNPFLQFILQKGTASGQVLVWCSVQVQTGETSSCRTIK
Ga0268266_1022135333300028379Switchgrass RhizosphereMTLKIASALLLMTALTGSAFAQAQAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRTIK
Ga0268265_1029723513300028380Switchgrass RhizosphereLMFVTALGGTAFAQAPAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRTIK
Ga0170824_12499082823300031231Forest SoilMGLRIAAGLFVVASVAAGSAFAQTPAPADKPTVGKYLADGYTVQRSEIGNPFLQFILQKSTASGQMLVWCSVQVQTGDTSSCRTIK
Ga0310887_1114444323300031547SoilMFVTALGGTAFAQAPAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTATGQVMVWCSVQVQTGETSSCRTIK
Ga0310813_1006341633300031716SoilMRLRIAAGLIFAAAAVAGTASAQTPAPADKPTVGKYLADGYTVQRSEIGNPFLQFILQKSTPSGQVLVWCSVQLQTGETSSCRTIK
Ga0302322_10264544513300031902FenFVALVGSASAQAPAPADKPTVGQYLADGYTVQRSDIGKPFLQFILQKSTASGQVLVWCSVQVQTGETSSCRTIK
Ga0310900_1021761423300031908SoilMKLKVASALMFVTALGGTAFAQAPAPADKPTVAKYLADGYTVQRSEIGNPFLQFILQKSTATGQVLVWCSVQVQTGETSSCRTIK
Ga0308175_10123087923300031938SoilSHLDGRPMRLRIAAGLIFAVAAVAGTASAQTPAPADKPTVGKYLADGYTVQRSEIGNPFLQFILQKSTPSGQVLVWCSVQLQTGDTSSCRTIK
Ga0308176_1107943723300031996SoilARSHQGQYCVRLQRVRHQQPVLGRKDQVDSAIDKSLMASHLDGRPMRLRIAAGLIFAAAAVAGTASAQTPAPADKPTVGKYLADGYTVQRSEIGNPFLQFILQKSTPSGQVLVWCSVQLQTGETSSCRTIK
Ga0310810_1008495463300033412SoilMRLRIAAGLIFAAAAVAGTASAQTPAPADKPTVGKYLADGYTVQRSEIGNPFLQFILQKSTPSGQVLVWCSVQLQTGDTSSCRTIK
Ga0247829_1080103923300033550SoilMIISKLLAAALLVGFASSALAQAQAQADKPTVGKYLADGYEVERAEIGNPFLQFILQKKTASGQVLVWCSVQVQTGETSSCRTIR


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