Metagenome Family F086198

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086198
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	100 residues
Representative Sequence	MSTTHTRTKFLTAAVGAVAATMAAPALLFLSAGTAQAVIHNLPTPRDCGGCDGFNPQPDKPDYPDLRPPLTRDPGSTVGIIIEGGAPSPSLNPGDTTGFVIYG
Number of Associated Samples	61
Number of Associated Scaffolds	96

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.28 %
% of genes near scaffold ends (potentially truncated)	36.04 %
% of genes from short scaffolds (< 2000 bps)	83.78 %
Associated GOLD sequencing projects	51
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.16

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (60.360 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere (21.622 % of family members)
Environment Ontology (ENVO)	Unclassified (61.261 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (87.387 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 23.66% β-sheet: 3.05% Coil/Unstructured: 73.28%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.16
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.16
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 96 Family Scaffolds
PF01554	MatE	4.17
PF08281	Sigma70_r4_2	3.12
PF02033	RBFA	1.04
PF08530	PepX_C	1.04
PF02576	RimP_N	1.04
PF13560	HTH_31	1.04
PF04542	Sigma70_r2	1.04
PF13489	Methyltransf_23	1.04
PF00440	TetR_N	1.04
PF06594	HCBP_related	1.04
PF02272	DHHA1	1.04

COG ID	Name	Functional Category	% Frequency in 96 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.04
COG0779	Ribosome maturation factor RimP	Translation, ribosomal structure and biogenesis [J]	1.04
COG0858	Ribosome-binding factor RbfA	Translation, ribosomal structure and biogenesis [J]	1.04
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	1.04
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.04
COG2931	Ca2+-binding protein, RTX toxin-related	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.04
COG2936	Predicted acyl esterase	General function prediction only [R]	1.04
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	1.04

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.36 %
Unclassified	root	N/A	39.64 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.36 %
Unclassified	root	N/A	39.64 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.36 %
Unclassified	root	N/A	39.64 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	57.66 %
Unclassified	root	N/A	39.64 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	57.66 %
Unclassified	root	N/A	39.64 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	56.76 %
Unclassified	root	N/A	39.64 %

Name	Rank	Taxonomy	Distribution
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	54.05 %
Unclassified	root	N/A	39.64 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.90 %

Name	Rank	Taxonomy	Distribution
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	52.25 %
Unclassified	root	N/A	39.64 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.64 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	29.73 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	18.02 %
Saccharothrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.64 %
unclassified Mycobacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium	23.42 %
Mycolicibacterium xanthum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium xanthum	18.02 %
Mycobacterium tuberculosis complex	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex	0.90 %
Saccharothrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.64 %
Mycolicibacterium xanthum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium xanthum	18.02 %
Mycobacterium sp. UM_CSW	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. UM_CSW	16.22 %
Mycobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp.	5.41 %
Mycobacterium sp. JS623	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. JS623	1.80 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.90 %
Saccharothrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005347\|Ga0070668_100034057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. UM_CSW	3882	Open in IMG/M
3300005347\|Ga0070668_100034057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. UM_CSW	3882	Open in IMG/M
3300005347\|Ga0070668_100034057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. UM_CSW	3882	Open in IMG/M
3300005347\|Ga0070668_100912400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. UM_CSW	786	Open in IMG/M
3300005347\|Ga0070668_101101677	Not Available	717	Open in IMG/M
3300005347\|Ga0070668_101305231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	660	Open in IMG/M
3300005355\|Ga0070671_100021198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. UM_CSW	5306	Open in IMG/M
3300005367\|Ga0070667_100453536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp.	1172	Open in IMG/M
3300005367\|Ga0070667_100896297	Not Available	825	Open in IMG/M
3300005367\|Ga0070667_100946060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	803	Open in IMG/M
3300005406\|Ga0070703_10418593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. UM_CSW	587	Open in IMG/M
3300005467\|Ga0070706_101293441	Not Available	669	Open in IMG/M
3300005467\|Ga0070706_101817067	Not Available	554	Open in IMG/M
3300005468\|Ga0070707_100559124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1106	Open in IMG/M
3300005468\|Ga0070707_102265364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	511	Open in IMG/M
3300005544\|Ga0070686_100822173	Not Available	750	Open in IMG/M
3300005548\|Ga0070665_101142984	Not Available	790	Open in IMG/M
3300005617\|Ga0068859_102510270	Not Available	567	Open in IMG/M
3300005719\|Ga0068861_100382487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1244	Open in IMG/M
3300005842\|Ga0068858_102314679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. UM_CSW	531	Open in IMG/M
3300005843\|Ga0068860_100434833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp.	1303	Open in IMG/M
3300005843\|Ga0068860_100434833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp.	1303	Open in IMG/M
3300005843\|Ga0068860_101435159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. UM_CSW	711	Open in IMG/M
3300006042\|Ga0075368_10347730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. UM_CSW	645	Open in IMG/M
3300006048\|Ga0075363_100195348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. UM_CSW	1155	Open in IMG/M
3300006048\|Ga0075363_100195348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. UM_CSW	1155	Open in IMG/M
3300006048\|Ga0075363_100220137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp.	1088	Open in IMG/M
3300006048\|Ga0075363_100220137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp.	1088	Open in IMG/M
3300006048\|Ga0075363_100400241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. UM_CSW	807	Open in IMG/M
3300006051\|Ga0075364_10003724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. JS623	8701	Open in IMG/M
3300006051\|Ga0075364_10025926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. UM_CSW	3735	Open in IMG/M
3300006051\|Ga0075364_10025926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. UM_CSW	3735	Open in IMG/M
3300006051\|Ga0075364_10025926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. UM_CSW	3735	Open in IMG/M
3300006163\|Ga0070715_11100757	Not Available	500	Open in IMG/M
3300006173\|Ga0070716_101260710	Not Available	596	Open in IMG/M
3300006177\|Ga0075362_10155613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp.	1099	Open in IMG/M
3300006177\|Ga0075362_10180598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. UM_CSW	1022	Open in IMG/M
3300006178\|Ga0075367_10681006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium xanthum	654	Open in IMG/M
3300006186\|Ga0075369_10000147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	19633	Open in IMG/M
3300006186\|Ga0075369_10310004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium xanthum	737	Open in IMG/M
3300006186\|Ga0075369_10418373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium xanthum	633	Open in IMG/M
3300006186\|Ga0075369_10654188	Not Available	505	Open in IMG/M
3300009092\|Ga0105250_10081209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium xanthum	1314	Open in IMG/M
3300009092\|Ga0105250_10081209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium xanthum	1314	Open in IMG/M
3300009092\|Ga0105250_10183134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. UM_CSW	879	Open in IMG/M
3300009092\|Ga0105250_10183134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. UM_CSW	879	Open in IMG/M
3300009092\|Ga0105250_10225735	Not Available	795	Open in IMG/M
3300009100\|Ga0075418_12675662	Not Available	545	Open in IMG/M
3300009177\|Ga0105248_13404246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium xanthum	505	Open in IMG/M
3300009553\|Ga0105249_10004533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	12007	Open in IMG/M
3300009553\|Ga0105249_10049733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. JS623	3822	Open in IMG/M
3300009553\|Ga0105249_11750460	Not Available	694	Open in IMG/M
3300009840\|Ga0126313_11314774	Not Available	598	Open in IMG/M
3300010040\|Ga0126308_10109651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	1702	Open in IMG/M
3300010042\|Ga0126314_10685862	Not Available	750	Open in IMG/M
3300010375\|Ga0105239_11238855	Not Available	860	Open in IMG/M
3300010397\|Ga0134124_11561531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium xanthum	689	Open in IMG/M
3300010399\|Ga0134127_13678023	Not Available	503	Open in IMG/M
3300012924\|Ga0137413_10541383	Not Available	863	Open in IMG/M
3300012924\|Ga0137413_11006851	Not Available	654	Open in IMG/M
3300012930\|Ga0137407_12038658	Not Available	548	Open in IMG/M
3300012944\|Ga0137410_11200286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium xanthum	653	Open in IMG/M
3300012951\|Ga0164300_10914800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium xanthum	556	Open in IMG/M
3300012955\|Ga0164298_11159452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium xanthum	583	Open in IMG/M
3300012984\|Ga0164309_10190890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium xanthum	1400	Open in IMG/M
3300012985\|Ga0164308_11766436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium xanthum	575	Open in IMG/M
3300012986\|Ga0164304_10360345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1019	Open in IMG/M
3300012986\|Ga0164304_10436505	Not Available	940	Open in IMG/M
3300012988\|Ga0164306_10495946	Not Available	938	Open in IMG/M
3300012989\|Ga0164305_10793166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	785	Open in IMG/M
3300013306\|Ga0163162_10057818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	3906	Open in IMG/M
3300013306\|Ga0163162_10057818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	3906	Open in IMG/M
3300013306\|Ga0163162_12204422	Not Available	632	Open in IMG/M
3300013306\|Ga0163162_12515725	Not Available	592	Open in IMG/M
3300013307\|Ga0157372_11867469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium xanthum	691	Open in IMG/M
3300014325\|Ga0163163_10484885	Not Available	1297	Open in IMG/M
3300014325\|Ga0163163_10850695	Not Available	976	Open in IMG/M
3300015242\|Ga0137412_10053175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3302	Open in IMG/M
3300015242\|Ga0137412_11136899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	551	Open in IMG/M
3300017792\|Ga0163161_11008949	Not Available	711	Open in IMG/M
3300025315\|Ga0207697_10545230	Not Available	510	Open in IMG/M
3300025711\|Ga0207696_1180586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium xanthum	558	Open in IMG/M
3300025922\|Ga0207646_11361242	Not Available	618	Open in IMG/M
3300025922\|Ga0207646_11380984	Not Available	613	Open in IMG/M
3300025923\|Ga0207681_11324946	Not Available	605	Open in IMG/M
3300025931\|Ga0207644_10631885	Not Available	890	Open in IMG/M
3300025937\|Ga0207669_11184935	Not Available	647	Open in IMG/M
3300025939\|Ga0207665_10875881	Not Available	712	Open in IMG/M
3300025961\|Ga0207712_10526519	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300025961\|Ga0207712_11371130	Not Available	632	Open in IMG/M
3300025972\|Ga0207668_10023902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	3937	Open in IMG/M
3300025972\|Ga0207668_10023902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	3937	Open in IMG/M
3300025972\|Ga0207668_10239599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium xanthum	1467	Open in IMG/M
3300025972\|Ga0207668_10239599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium xanthum	1467	Open in IMG/M
3300025972\|Ga0207668_11132026	Not Available	702	Open in IMG/M
3300025986\|Ga0207658_10103835	All Organisms → cellular organisms → Bacteria	2232	Open in IMG/M
3300025986\|Ga0207658_10392925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium xanthum	1217	Open in IMG/M
3300025986\|Ga0207658_10392925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium xanthum	1217	Open in IMG/M
3300025986\|Ga0207658_10616584	Not Available	976	Open in IMG/M
3300025986\|Ga0207658_11603257	Not Available	595	Open in IMG/M
3300025986\|Ga0207658_11755864	Not Available	566	Open in IMG/M
3300026088\|Ga0207641_11633354	Not Available	646	Open in IMG/M
3300026118\|Ga0207675_100100965	All Organisms → cellular organisms → Bacteria	2718	Open in IMG/M
3300026118\|Ga0207675_101135655	Not Available	801	Open in IMG/M
3300026121\|Ga0207683_11882305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix	547	Open in IMG/M
3300028380\|Ga0268265_10212922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1685	Open in IMG/M
3300028381\|Ga0268264_10481383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium xanthum	1207	Open in IMG/M
3300028381\|Ga0268264_10481383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium xanthum	1207	Open in IMG/M
3300028381\|Ga0268264_11335968	Not Available	727	Open in IMG/M
3300028381\|Ga0268264_11335968	Not Available	727	Open in IMG/M
3300033475\|Ga0310811_11412479	Not Available	533	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	72.07%
Environmental	Environmental	27.93%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	72.07%
Terrestrial	Environmental → Terrestrial	27.93%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	36.04%
Soil	Environmental → Terrestrial → Soil	27.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.92%
Roots	Host-Associated → Plants → Roots	17.12%

Habitat	Taxonomy	Distribution
Soil	Host-Associated → Plants → Rhizosphere → Soil	22.52%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	18.02%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	18.02%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	15.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.51%
Loam	Environmental → Terrestrial → Soil → Loam	9.91%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.80%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	22.52%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.02%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	18.02%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	15.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.51%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.91%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	21.62%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	15.32%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	12.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	10.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.11%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.41%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.50%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.70%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.80%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006042	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3	Host-Associated	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006177	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006186	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025711	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070668_1000340572	3300005347	Switchgrass Rhizosphere	MNTAHKRTKFVTAALGAVVATTAAPALLFLSAGTAQAVIHYLPTPRTCAGCDGFNPQPNTPDYPDLRPPVTGDPGSTVGIIIDGSAPSGSLNPGDKGFIVIGG*
Ga0070668_1000340574	3300005347	Switchgrass Rhizosphere	MTTTHTRTKRVTAAVGAIVATTAAPALLFLSAGTAQAVIHDLPTPRECGGCDELNPQPDHSGFPGLRPPLTRDPGNTVGIIIDGCAPSPSLNPCHTPGVVITGG*
Ga0070668_1000340575	3300005347	Switchgrass Rhizosphere	MTAPHTHKKVLTSAVGAVVATIAAPALLFLSAGTAQAVIHDIPTPRDCGGCDGFNPQADKPDYPDLSPPLTRDPGSTAGIIIDYWGAP*
Ga0070668_1009124001	3300005347	Switchgrass Rhizosphere	THTRTKFLTAAVGAVAATMAAPAVLFLSAGTAQAGIHYLPTPRDCPGCNGFNPQPDTADDPDLRPPLTGDPGSTVGIIIDGGAPSPSLNPGDTAGFVIYG*
Ga0070668_1011016772	3300005347	Switchgrass Rhizosphere	TTHTRTKFLTAAVGAVAATMAAPALLFLSAGTAQAVIHNLPTPRDCGGCDGFNPQPDKPDYPELHPPLTRNPGSTVGIVIDGCAPSPSPNPGHTTGVVVIGG*
Ga0070668_1013052312	3300005347	Switchgrass Rhizosphere	HTMTTHTRTKFLTAAVGAVAATMAAPALLFVSAGTAHAVIHYLPTPRDCGACDGFNPQPDPHGFPELRPPLTGDPGSTVGIIIKGGAPSPSLNPGDTTGFVVIGG*
Ga0070671_1000211987	3300005355	Switchgrass Rhizosphere	MTAPHTHKKVLTSAVGAVVATIAAPALLFLSAGTAQAVIHDIPTPRDCGGCDGFNPQPDKPDYPDLSPPLTRDPGSTAGIIIDYWGAP*
Ga0070667_1004535361	3300005367	Switchgrass Rhizosphere	MTATHTRTKFLTAAVSAVVATTAAPALLFLSAGTAQAVIHYIPTPRDCAGCDGFNPQPDPHGFPELRPPLTGDPGSTVGIVINGGAPSPSLNPGDTTGVVVIGG*
Ga0070667_1008962972	3300005367	Switchgrass Rhizosphere	MTTTHTRTKFITAAVGAVVATMAAPALLFLGAGTAQAVIHDLPTPRECPGCNGFNPQPDMPDDLDLRPPLTGDPGSTVRIVIDEGAPSPSLNPGDTAGVVIIGG*
Ga0070667_1009460601	3300005367	Switchgrass Rhizosphere	MNTAHKRTKFVTAAVSALVATTAAPALLFLSAGTAHAVIHNVPTPRGCGGCDGFNPQPNTPDYPDLRPPVTGDPGSTVGIIIDGSAPSGSLNPGDKGFIVIGG*
Ga0070703_104185931	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MNTTHTRTKFVTAALGAVATTVAAPALLFVSAGTAQAVIHYLPTPRDCAGCDGFNPQPDPHGFPELRPPLTGDPGSTVGIIIEGCAPSSSLNPGDTAGVVVIGG*
Ga0070706_1012934412	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTTHTRTKFLTAAVGAVAATIAAPALLFVSAGTAQAVIHYLPTPRDCGGCDELNPQPDLSGYPGLRPPLTRDPGSTVGIIINGGAPSPSLNPGDTKGFVVIGG*
Ga0070706_1018170671	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTTHTRTKFLTAALGAVAATMAAPALLFLSAGTAQAVIHYLPTPRDCGACDGFNPQPDPHGFPELRPPLTGDPGSTVGII
Ga0070707_1005591242	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTTTHTRTKALTGVVGAPIATIAAPALLVLSAGTAQAVVHNLPTPRNCGSCDELNPQPDTPDDPDLRPPLTRSPSLNPGDTVGIIVNYWGAP*
Ga0070707_1022653641	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	EHTMTTHTRTKFLTAAVGAVAATMAAPALLFLSAGTAQAVIHYLPTPRDCGQCDGFNPQPDKPDDPDLRPPLTRDPGSTVGIIIDGGAPSPSLNPGDTTGVVIIGG*
Ga0070686_1008221732	3300005544	Switchgrass Rhizosphere	MTANHTHKKVLTSAVGAVVATIAAPALLFLSAGTAQAVIHDIPTPRDCGGCDGFNPQADKPDYPDLSPPLTRDPGSTAGIIIDYWGAP*
Ga0070665_1011429842	3300005548	Switchgrass Rhizosphere	VALLPIESGPTEAATAEQEHDMTTTHTRTKRVTAAVGAIVATTAAPALLFLSAGTAQAVIHDLPTPRECGGCDELNPQPDHSGFPGLRPPLTRDPGNTVGIIIDVCAITIAEYRHTPGVVITGLTLAPARLIFESGTSATKFRNWGINRL*
Ga0068859_1025102702	3300005617	Switchgrass Rhizosphere	TKFLTATVGAVAATMAAPALLFLSTGTAQAVIHDIPTPRNCGGCDGFNPQADKPDYPDLSPPLTRDPGSTAGIIIDYWGAP*
Ga0068861_1003824872	3300005719	Switchgrass Rhizosphere	MNTAHKRTKFVTAALGAVVATTAAPALLFLSAGTAQAVIHYLPTPRTCAGCDGFNPQPNTPDSPDLRPPVTGDPGSTVGIIIDGSAPSGSLNPGDKGFIVIGG*
Ga0068858_1023146791	3300005842	Switchgrass Rhizosphere	MNTAHKRTKFVTAALGAVVATTAAPALLFLSAGTAHAVIHNVPTPRTCAGCDGFNPQPNTPDYPDLRPPVTGDPGSTVGIIIDGSAPSGSLNPGDKGFIVIG
Ga0068860_1004348331	3300005843	Switchgrass Rhizosphere	MTTTHTRTKFLTAAVGAVVATMAAPALLFLGAGTAQAVIHDLPTPRECPGCNGFNPQPDMPDDLDLRPPLTGDPGSTVRIVIDEGAPSPSLNPGDTAGVVIIGG*
Ga0068860_1004348332	3300005843	Switchgrass Rhizosphere	MTTHTRTKFITAAVGAVAATMAAPALLFVSAGTAHAVIHYLPTPRDCGSCDGFNPQPDPPGFPELRPPLTGDPGSTVGIIIDGGAPSPSLNPGDTTEVVVIGG*
Ga0068860_1014351592	3300005843	Switchgrass Rhizosphere	HTHKKVLTSAVGAVVATIAAPALLFLSAGTAQAVIHDIPTPRDCGGCDGFNPQADKPDYPDLSPPLTRDPGSTAGIIIDYWGAP*
Ga0075368_103477301	3300006042	Populus Endosphere	MNTTHTRTKFLTAALGAVAATAAAPGLLFLSAGTAQAVIHYLPTPRTCAGCDGFNPQPNTPDYPDLRPPVTGDPGSTAGIIIDRSAPSGSLNPGDKGFIVIGG*
Ga0075363_1001953481	3300006048	Populus Endosphere	MTTHTRTKFVTAAVGAVIATMAAPALLFLSAGTAQAVIHYLPTPRDCGGCDGFNPQPDKPDYPELRPPLTRNPGSTVGIIIEGGAPSPSPNPGHTTGVVVIGG*
Ga0075363_1001953482	3300006048	Populus Endosphere	MTTAHTRTRIHTAAVGAIIATMAAPALLFLSAGTAQAVIHNLPTPRNCGGCDGFNPQPDTPDDPDSRPPLTGDPGSTAGIIVDYWGAP*
Ga0075363_1002201371	3300006048	Populus Endosphere	TKFLTAAVGAVAATMAAPALLFLSAGTAQAVIHYLPTPRECGGCDELNPQPDPHGFPELRPPLTGDPGSTVGIVINGGAPSPSLNPGDTAGVVIIGG*
Ga0075363_1002201372	3300006048	Populus Endosphere	MRPIGAATTEQEHTMTTHTRTKFLTAAVGAVAATMAAPALLFLSTGTAQAVIHYIPKPRDCPGCNGFNPDKPDDPDLRPPLTGDPGSTAGIIIDGGAPSPSMNPGDTAGFVIYG*
Ga0075363_1004002411	3300006048	Populus Endosphere	MTTHTRTKFLTAALGAVAATMAAPALLFVSAGTAQAVIHYLPTPRDCAGCDGFNPQPDPHGFPDLRPPVTGDPGSTAGIII
Ga0075364_100037242	3300006051	Populus Endosphere	MNTTHTRTKFLTAALGAVAATAAAPGLLFLSAGTAQAVIHYLPTPRTCAGCDGFNPQPNTPDYPDLRPPVTGDPGSTAGIIIDGSAPSGSLNPGDKGFIVIGG*
Ga0075364_100259263	3300006051	Populus Endosphere	MTTHTRTKFLTAALGAVAATMAAPALLFVSAGTAQAVIHYLPTPRDCAGCDGFNPQPDPHGFPDLRPPVTGDPGSTAGIVINGGAPSPSVNPGDTAGVVVIGG*
Ga0075364_100259265	3300006051	Populus Endosphere	MTTHTRTKFLTAAVGAVAATMAAPALLFLSTGTAQAVIHYIPTPRDCPGCNGFNPDKPDDPDLRPPLTGDPGSTAGIIIDGGAPSPSMNPGDTAGFVIYG*
Ga0075364_100259266	3300006051	Populus Endosphere	MTTHTRTKFVTASVGAVIATMAAPALLLLSAGTAQAVIHYLPTPRECGGCDELNPQPDPHGFPELRPPLTGDPGSTAGIVINGGAPSPSLNPGDTAGVVIIGG*
Ga0070715_111007571	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VNTTHTRTKFVTAVGVVVATMAAPALLFLSAGTAQAVIHNLPTPRGCGGCDGLNPQPNTPNDPDLRPPLTRSPSLNPGDTVGIIVNYWG
Ga0070716_1012607102	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VNTTHTRTKFVTAVGVVVATMAAPALLFLSAGTAQAVIHNLPTPRGCGGCDGLNPQPNTPNDPDLRPPLTRSPSLNPGDTVGIIVNYWGA
Ga0075362_101556133	3300006177	Populus Endosphere	MTTHTRTKFLTAAVGAVAATMAAPALLFLSAGTAQAVIHYLPTPRECGGCDELNPQPDPHGFPELRPPLTGDPGSTVGIVINGGAPSPSLNPGDTAG
Ga0075362_101805981	3300006177	Populus Endosphere	TMTTHTRTKFLTAAVGAVAATMAAPALLFLSTGTAQAVIHYIPTPRDCPGCNGFNPDKPDDPDLRPPLTGDPGSTAGIIIDGGAPSPSMNPGDTAGFVIYG*
Ga0075367_106810062	3300006178	Populus Endosphere	VNTTHTRTKFVTAVGVVVATMAAPALLFLSAGTAQAVIHYLPTPRDCGSCNGFNPQPDPPGYPDFRPPLTSDPGSTVGIIIEG
Ga0075369_1000014712	3300006186	Populus Endosphere	MTTHTRTKFVTASVGAVIATMAAPALLLLSAGTAQAVIHYLPTPRECGGCDELNPQPDPHGFPELRPPLTGDPGSTVGIVINGGAPSPSLNPGDTAGVVIIGG*
Ga0075369_103100042	3300006186	Populus Endosphere	MTTHTRTKFLTAAVGAVAATVAAPALLFVSAGTAQAVIHYLPTPRDCAGCDGFNPQPDPHGFPELRPPLTGDPGSTVGIIIDGSAPSGSLNPGDKGFIVIGG*
Ga0075369_104183731	3300006186	Populus Endosphere	MTTHTRTKFLTAAGVVVATVAAPAMLFLSAGTAQAVIHYLPTPRDCGGCDGFNPQPDKPDYPELHPPLTRDPGSTVGIIIDGCAPSPSPNPGHTTGVVVIGG*
Ga0075369_106541882	3300006186	Populus Endosphere	MNTTHTRTKFLTAAVGAIAATMAAPALLFLSAGTAQAVIHNLPTPRNCGGCDGFNPQPDKPGYPDFRPPLTGDPGSTVGIIIEGG
Ga0105250_100812091	3300009092	Switchgrass Rhizosphere	MNATHTRTKFLTAAVGAVAATMAAPAVLFLSAGTAQAGIHYLPTPRDCPGCNGFNPQPDTADDPDLRPPLTGDPGSTVGIVINGGAPSPSLNPGDTAGVVIIGG*
Ga0105250_100812092	3300009092	Switchgrass Rhizosphere	MTTHTRTKFLTAAVGAVAATMAAPALLFVSAGTAHAVIHYLPTPRDCGACDGFNPQPDPHGFPELRPPLTGDPGSTVGIIIKGGAPSPSLNPGDTTGFVVIGG*
Ga0105250_101831341	3300009092	Switchgrass Rhizosphere	PHTHKKVLTSAVGAVVATIAAPALLFLSAGTAQAVIHDIPTPRDCGGCDGFNPQADKPDYPDLSPPLTRDPGSTAGIIIDYWGAP*
Ga0105250_101831342	3300009092	Switchgrass Rhizosphere	MTTTHTRTKRVTAAVGAIIATTAAPALLFLSAGTAQAVIHDLPTPRECGGCDELNPQPDHSGFPGLRPPLTRDPGNTVGIIIDGCAPSPSLNPCHTPGVVITGG*
Ga0105250_102257351	3300009092	Switchgrass Rhizosphere	MTTPHTHKKVLTSAVGAVLATIAAPALLFLSAGTAQAVIHDIPTPRDCGGCVGFNPQAHKPDYSDLNPPLTRDPGSTAGIIIDYWGAP*
Ga0075418_126756621	3300009100	Populus Rhizosphere	MRPIGAATTEQEHTMTTHTRTKFLTAAVGAVAATMAAPALLFLSTGTAQAVIHYIPTPRDCPGCNGFNPDKPDDPDLRPPLTGDPGSTAGI
Ga0105248_134042461	3300009177	Switchgrass Rhizosphere	MSTTHTRTKFLTAAVGAIAATMAAPSLLFLSAGNAQAVIHYLPTPRNCGGCDGFNPQPDKPDYPELRPPLTRNPGSTVGIIIEGGAPSPSPNPGHTTGVVVIGG*
Ga0105249_1000453317	3300009553	Switchgrass Rhizosphere	VALLPIESGPTEAATAEQEHDMTTTHTRTKRVTAAVGAIVATTAAPALLFLSAGTAQAVIHDLPTPRECGGCDELNPQPDHSGFPGLRPPLTRDPGNTVGIIIDGCAPSPSLNPCHTPGVVITGG*
Ga0105249_100497332	3300009553	Switchgrass Rhizosphere	MNTAHKRTKFVTAALGAVVATTAAPALLFLSAGTAQAVIHYLPTPRTCAGCDGFNPQPNTPDYPDLRPPVTGDPGGTVGIIIDGSAPSGSLNPGDKGFIVIGG*
Ga0105249_117504602	3300009553	Switchgrass Rhizosphere	GAPTYERDPLWAATTEQEHTMTTTHTRTKFLTAAVSAVAATMAAPAVLFLSAGTAQAVIHNLPTPRECGGCDELNPQPDLSGYPGLRPPLTGDPGSTVGIVINGGAPSPSLNPGDTAGVVIIGG*
Ga0126313_113147741	3300009840	Serpentine Soil	MNTTHTRTKFLTAAVGAVAATMTASALLFLSAGTAQAVIHHLPTPRGCYGCDELDLQPGPSIYPSEIDNPDLRPPLTRSPSLNPGETVGIIINYRVAP*
Ga0126308_101096512	3300010040	Serpentine Soil	MTVTHTHSKTLTAAVGAVIATVAAPALLFLSAGTAQAVIHNLPTPRSCGSCDGFNPQPDTPDDPDLRPPLTRSPSLNPGDPVGIIVNYFGAP*
Ga0126314_106858621	3300010042	Serpentine Soil	MTVTHTHSKTLTAAVGAVIATVAAPALLFLSAGTAQAVIHNLPTPRGCGGCDELNPQQDQPGYPDLRPPLSGDPGSTVGIVIEGGAPSSLNPGDTKGVVIIGG*
Ga0105239_112388551	3300010375	Corn Rhizosphere	MSTTHTRTKFLTAAVGAVAATMAAPALLFLSAGTAQAVIHYLPTPRNCGGCDGFNPQPDKPDYPELRPPLTGDPGSTVGIVIEGGAPSPSLNPGDTTGFVVIGG*
Ga0134124_115615311	3300010397	Terrestrial Soil	MNTTHTRTKFLTAAVGAIAATMAAPSLLFLSAGNAQAVIHYLPTPRNCGGCDGFNPQPDKPDYPELRPPLTRNPGSTVGIIIEGGAPSPSPNPGHTTGVVVIGG*
Ga0134127_136780231	3300010399	Terrestrial Soil	MTTHTRTKFLTAALGAVVATTAAPALLFLSAGTAQAVIHYLPTPRTCAGCDGFSPQPDTPDYPDLRPPVTGDPGSTVGIIIDGSAPSGSLSPGDKGFI
Ga0137413_105413832	3300012924	Vadose Zone Soil	MTATHTRTRFVTAAVAVVATMAAPALLFLSAGNAQAVIHYLPTPRDCGQCDGFNPQPDKPDDPDLRPPLTRDPGSTVGIIIDGGAPSPSLNPGDTAGVVVIGG*
Ga0137413_110068512	3300012924	Vadose Zone Soil	DHPKEHIMTTTPTRTKILTAAVGAVVATVAAPALLFLGAGTAQAVIHYIPTPRTCAGCQGFNPQPDLPGYPGLRPPLTGDPGGTVGIIIDGGAPSPSLNPGDTAGFVIYG*
Ga0137407_120386581	3300012930	Vadose Zone Soil	MNTTQTRTKILTAAVGAVVATVAAPALLFVSAGTAQAVIHYLPTPRSCGGCDGFNPQPDTPDNPDLRPPLTGDPGSTVGIIIDGSAPSPSLNPGDTAGVVVIGG*
Ga0137410_112002861	3300012944	Vadose Zone Soil	MTTTYTRTKFVTAAVGAVVATMAAPALLFVSAGTAQAVIHYLPTPRSCGGCDGFNPRPDLPGFPELRPPLTGDPGSTVGIIIDGGAPSPSLNRGDTAGVVVIGG*
Ga0164300_109148001	3300012951	Soil	MSTTHTRTKFLTAAVGAVAATMAAPALLFLSAGTAQAVIHYLPTPRDCGGCDGFNPQPDKPDYPELHPPLTRDPGSAVGIVIDGCAPSPSPNPGHTTGVVVIGG*
Ga0164298_111594521	3300012955	Soil	MNTTHTRTKFLTAAVGAIAATMAAPSLLFLSAGNAQAVIHYLPTPRNCGGCDGFNPQPDKPDYPELRPPLTRNPGSTVGIIIEGGAPSPSPNP
Ga0164309_101908902	3300012984	Soil	MSTTHTRTKFLTAAVGAVAATMAAPALLFLSAGTAQAVIHYLPTPRDCGGCDGFNPQPDKPDYPELRPPLTRNPGSTVGIIIEGGAPSPSPNPGHTTGVVVIGG*
Ga0164308_117664362	3300012985	Soil	MSTTHTRTKFLTAAVGAVAATMAAPALLFLSAGTAQAVIHYLPTPRDCGGCDGFNPQPDKPDYPELRPPLTRNPGSTVGIVIDGCAPSPSPNPGHTTGVVVIGG*
Ga0164304_103603452	3300012986	Soil	VNTTHTRTKFVTAVGVVVATMAAPALLFLSAGTAQAVIHNLPTPRQCGGCDGLNPQPNTPNDPDLRPPLTRSPSLNPGDTVGIIVNYWGAP*
Ga0164304_104365051	3300012986	Soil	MNTTHTRTKFLTAAVGAIAATMAAPSLLFLSAGNAQAVIHYLPTPRDCGGCDGFNPQPDKPDYPELRPPLTRNPGSTVGIIIEGGAPSPSPNPGHTTGVVVIGG*
Ga0164306_104959461	3300012988	Soil	MTTHTRTKFLTAAVGAVAATMAAPALLFLSAGTAQAVIHYLPTPRNCGGCDGFNPKPDKPDYPDLRPPLTRDPGSAVGIVIDGCAPSPSPNPGHTTGVVVIGG*
Ga0164305_107931662	3300012989	Soil	VNTTHTRTKFVTAVGVVVATMAAPALLFLSAGTAQAVIHNLPTPRGCGGCDGLNPQPNTPNDPDLRPPLTRSPSLNPGDTVGIIVNYWGAP*
Ga0163162_100578182	3300013306	Switchgrass Rhizosphere	MSTTHTRTKFLTAAVGAVAATMAAPALLFLSAGTAQAVIHNLPTPRDCGGCDGFNPQPDKPDYPELHPPLTRNPGSTVGIVIDGCAPSPSPNPGHTTGVVVIGG*
Ga0163162_100578183	3300013306	Switchgrass Rhizosphere	MTTHTRTKFLTAAVGVIASTIAAPALLFLSAGTAQAVIHYLPTPRNCGGCDGFNPQPDKPDYPDLRPPLTRDPGSTVGIIIEGGAPSPSLNPGDTTAFIIYG*
Ga0163162_122044221	3300013306	Switchgrass Rhizosphere	MNATHTRTKFLTAAVGAVAATMAAPAVLFLSAGTAQAVIHNLPTPRECGGCDELNPQPDLSGYPGLRPPLTGDPGSTVGIVINGGAPSPSLNPGDTAGVVIIGG*
Ga0163162_125157252	3300013306	Switchgrass Rhizosphere	MNTAHKRTKFVTAALGAVVATTAAPALLFLSAGTAQAVIHYLPTPRTCAGCDGFNPQPNTPDYPDLRPPVTGDPGSTV
Ga0157372_118674691	3300013307	Corn Rhizosphere	TRTKFLTAAVGAVAATMGAPALLFLSAGTAQAVIHYLPTPRNCGGCDGFNPQPDKPDYPELRPPLTRNPGSTVGIIIEGGAPSPSPNPGHTTGVVVIGG*
Ga0163163_104848852	3300014325	Switchgrass Rhizosphere	MNTAHKRTKFVTAALGAVVATTAAPALLFLSAGTAQAVIHYLPTPRTCAGCDGFNPQPNTPDYPDLHPPVTGDPGGTVGIIIDGGAPSGSLNSATRASSS*
Ga0163163_108506952	3300014325	Switchgrass Rhizosphere	MSTTHTRTKFLTAAVGAVAATMAAPALLFLSAGTAQAVIHNLPTPRDCGGCDGFNPQPDKPDYPDLRPPLTRDPGSTVGIIIEGGAPSPSLNPGDTTGFVIYG*
Ga0137412_100531751	3300015242	Vadose Zone Soil	MSATHRGCDHPKEHIMTTTPTRTKILTAAVGAVVATVAAPALLFVSAGTAQAVIHYLPTPRDCGQCDGFNPQPDKPDDPDLRPPLTRDPGSTAGIIIDGGAPSPSLNPGDTAGFVIYG*
Ga0137412_111368991	3300015242	Vadose Zone Soil	QEYIMTTTHTGTKFLTAAVGALVATMAAPALLFLSAGTAQAVIHYLPTPRSCGSCDGFNPQPDPSGFPDSRPPLTGDPGGTVGIIIEGGAPPPSLNPGDTVGMIIHG*
Ga0163161_110089491	3300017792	Switchgrass Rhizosphere	MNATHTRTKFLTAAVGAVVATMAAPALLFLSAGNAQAVIHYLPTPRDCGGCDGFNPQPDKPDYPGLRPPLTSDPGSTVGIVIEGGAPSPSLNPGDTTGVVVIGG
Ga0207697_105452301	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MTTTHTRTKFLTAAVGVIASTIAAPALLLVSAGTAQAVIHYLPTPRDCGGCDGFNPQPDTPNNADLRPPLTRSPSLNPGDTVGI
Ga0207696_11805861	3300025711	Switchgrass Rhizosphere	MTTHTRTKFLTAAVGAVAATVAAPALLFVSAGTAQAVIHYLPTPRDCAGCDGFNPQPDPHGFPELRPPLTGDPGSTVGIIIDGSAPSGSLNPGDKGFIVIGG
Ga0207646_113612422	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTTTHTRTKFLTTAVSAVVATMAAPALLFLGAGTAQAVIHNLPTPRNCGGCDGFNPQPNTPDYPDLRPPLTGDPGGTVGIIIDGGAPSGSLNPGDKGFIVIGG
Ga0207646_113809841	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTTHTRTKFLTAAVGAVAATMAAPALLFLSAGTAQAVIHYLPTPRDCGQCDGFNPQPDKPDDPDLRPPLTRDPGSTVGIIIDGGAPSPSLNPGDTTGVVIIGG
Ga0207681_113249461	3300025923	Switchgrass Rhizosphere	MNTAHKRTKFVTAALGAVVATTAAPALLFLSAGTAQAVIHYLPTPRTCAGCDGFNPQPNTPDYPDLRPPVTGDPGSTVGIIIDGSAPSGSLNPGDKGFIVIGG
Ga0207644_106318851	3300025931	Switchgrass Rhizosphere	MTAPHTHKKVLTSAVGAVVATIAAPALLFLSAGTAQAVIHDIPTPRDCGGCDGFNPQPDKPDYPDLSPPLTRDPGSTAGIIIDYWGAP
Ga0207669_111849351	3300025937	Miscanthus Rhizosphere	MSTTHTRTKFLTAAVGAVAATMAAPALLFLSAGTAQAVIHYLPTPRGCSGCDGFNAQPDTPDDPDFRPPLTSDPGSTVGIIIEGGAPSPSLNPGDTTGFIIYG
Ga0207665_108758812	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VNTTHTRSKFVTAVGVVVATMAAPALLFLSAGTAQAVIHNLPTPRGCGGCDGLNPQPNTPNDPDLRPPLTRSPSLNPGDTVGIIVNYWGAP
Ga0207712_105265192	3300025961	Switchgrass Rhizosphere	MNTAHKRTKFVTAALGAVVATTAAPALLFLSAGTAQAVIHYLPTPRTCAGCDGFNPQPNTPDYPDLRPPVTGDPGGTVGIIIDGSAPSGSLNPGDKGFIVIGG
Ga0207712_113711301	3300025961	Switchgrass Rhizosphere	MTTHTRTKFLTAAVGAVAATMAAPAVLFLSAGTAQAVIHNLPTPRECGGCDELNPQPDLSGYPGLRPPLTGDPGSTVGIVINGGAPSPSLNPGDTAGVVIIGG
Ga0207668_100239022	3300025972	Switchgrass Rhizosphere	MTAPHTHKKVLTSAVGAVVATIAAPALLFLSAGTAQAVIHDIPTPRDCGGCDGFNPQADKPDYPDLSPPLTRDPGSTAGIIIDYWGAP
Ga0207668_100239023	3300025972	Switchgrass Rhizosphere	MTTTHTRTKRVTAAVGAIVATTAAPALLFLSAGTAQAVIHDLPTPRECGGCDELNPQPDHSGFPGLRPPLTRDPGNTVGIIIDGCAPSPSLNPCHTPGVVITGG
Ga0207668_102395991	3300025972	Switchgrass Rhizosphere	TMNATHTRTKFLTAAVGAVAATMAAPAVLFLSAGTAQAGIHYLPTPRDCPGCNGFNPQPDTADDPDLRPPLTGDPGSTVGIIIDGGAPSPSLNPGDTAGFVIYG
Ga0207668_102395993	3300025972	Switchgrass Rhizosphere	MTTHTRTKFLTAAVGAVAATVAAPALLFVSAGTAQAVIHYLPTPRDCAGCDGFNPQPDPHGFPELRPPLTGDPGSTVGIIIKGGA
Ga0207668_111320261	3300025972	Switchgrass Rhizosphere	TKFLTAAVGAVAATMAAPALLFLSAGTAQAVIHNLPTPRDCGGCDGFNPQPDKPDYPELHPPLTRNPGSTVGIVIDGCAPSPSPNPGHTTGVVVIGG
Ga0207658_101038352	3300025986	Switchgrass Rhizosphere	MNTAHKRTKFVTAAVSALVATTAAPALLFLSAGTAHAVIHNVPTPRGCGGCDGFNPQPNTPDYPDLRPPVTGDPGSTVGIIIDGSAPSGSLNPGDKGFIVIGG
Ga0207658_103929251	3300025986	Switchgrass Rhizosphere	MTATHTRTKFLTAAVSAVVATTAAPALLFLSAGTAQAVIHYIPTPRDCAGCDGFNPQPDPHGFPELRPPLTGDPGSTVGIVINGGAPSPSLNPGDTTGVVVIGG
Ga0207658_103929253	3300025986	Switchgrass Rhizosphere	MTTAHTRTKFLTAAVGAVIATMAAPALLFLGAGTAQAVIHNVPTPRSCGGCEGFNPQPDPPGFPELRPPLTGDPGSTVGIIIDGGAPSPSLNPGD
Ga0207658_106165842	3300025986	Switchgrass Rhizosphere	MTTTHTRTKFITAAVGAVVATMAAPALLFLGAGTAQAVIHDLPTPRECPGCNGFNPQPDMPDDLDLRPPLTGDPGSTVRIVIDEGAPSPSLNPGDTAGVVIIGG
Ga0207658_116032571	3300025986	Switchgrass Rhizosphere	MTIHTRTKFLTAAVGAVAATMAAPALLFLSTGTAHAVIHDIPTPRNCGGCDGFNPQPDPPGFPELRPPLTGDPGSTVGIVIEGGAPSPSLNPGDTAGVVIIGG
Ga0207658_117558642	3300025986	Switchgrass Rhizosphere	MTTTHTRTKRVTAAVGAIVATTAAPALLFLSAGTAQAVIHDLPTPRECGGCDELNPQPDHSGFPGLRPPLTRDPGNTVGIIIDGCAPSPSLNPCHTP
Ga0207641_116333542	3300026088	Switchgrass Rhizosphere	YEARHRRRGRNRRHYGGALLFLSAGTAQAVIHDLPTPRECGGCDELNPQPDHSGFPGLRPPLTRDPGNTVGIIIDGCAPSPSLNPCHTPGVVITGG
Ga0207675_1001009654	3300026118	Switchgrass Rhizosphere	MNTAHKRTKFVTAALGAVVATTAAPALLFLSAGTAQAVIHYLPTPRTCAGCDGFNPQPNTPDSPDLRPPVTGDPGSTVGIIIDGSAPSGSLNPGDKGFIVIGG
Ga0207675_1011356552	3300026118	Switchgrass Rhizosphere	AAVGAVAATMAAPALLFLSAGTAQAVIHNLPTPRDCGGCDGFNPQPDKPDYPELHPPLTRNPGSTVGIVIDGCAPSPSPNPGHTTGVVVIGG
Ga0207683_118823052	3300026121	Miscanthus Rhizosphere	VNTTHTRTKFVTAVGVVVATMAAPALLFLSAGTAQAVIHNLPTPRGCGGCDGLNPQPNTPNDPDLRPPLTRSPSLNPGDTVGIIVNYWGAP
Ga0268265_102129222	3300028380	Switchgrass Rhizosphere	MSTTHTRTKFLTAAVGAVAATMAAPALLFLSAGTAQAVIHNLPTPRDCGGCDGFNPQPDKPDYPDLRPPLTRDPGSTVGIIIEGGAPSP
Ga0268264_104813832	3300028381	Switchgrass Rhizosphere	MTTHTRTKFITAAVGAVAATMAAPALLFVSAGTAHAVIHYLPTPRDCGSCDGFNPQPDPPGFPELRPPLTGDPGSTVGIIIDGGAPSPSLNPGDTTEVVVIGG
Ga0268264_104813833	3300028381	Switchgrass Rhizosphere	MTTTHTRTKFLTAAVGAVVATMAAPALLFLGAGTAQAVIHDLPTPRECPGCNGFNPQPDMPDDLDLRPPLTGDPGSTVRIVIDEGAPSPSLNPGDTAGVVIIGG
Ga0268264_113359681	3300028381	Switchgrass Rhizosphere	MTTTHTRTKRVTAAVGAIVATTAAPALLFLSAGTAQAIIHDLPTPRECGGCDELNPQPDHSGFPGLRPPLTRDPGNTVGIIIDGCAPSPSLNPCHTP
Ga0268264_113359682	3300028381	Switchgrass Rhizosphere	IMTAPHTHKKVLTSAVGAVVATIAAPALLFLSAGTAQAVIHDIPTPRDCGGCDGFNPQADKPDYPDLSPPLTRDPGSTAGIIIDYWGAP
Ga0310811_114124792	3300033475	Soil	PPGVATTEQEHIMTTTQTRMKFLTAAVSALVATTAAPALLFLSAGTAHAVIHNVPTPRGCGGCDGFNPQPSTPDYPDLHPPVTGDPGGTVGIIIDGGAPSGSLNLGDKGFIVIGG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F086198

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences