Basic Information | |
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Family ID | F086176 |
Family Type | Metagenome |
Number of Sequences | 111 |
Average Sequence Length | 57 residues |
Representative Sequence | MNKKIFLTEFTWDGTDYTGPNIVAETHEQAELICESLGCRVVGELTDVIVAEERNETLH |
Number of Associated Samples | 83 |
Number of Associated Scaffolds | 111 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 72.97 % |
% of genes near scaffold ends (potentially truncated) | 38.74 % |
% of genes from short scaffolds (< 2000 bps) | 75.68 % |
Associated GOLD sequencing projects | 65 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (39.640 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean (28.829 % of family members) |
Environment Ontology (ENVO) | Unclassified (89.189 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (84.685 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 18.64% β-sheet: 30.51% Coil/Unstructured: 50.85% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Marine Deep Ocean Seawater Marine Oceanic Marine Aqueous Marine Marine Filtered Seawater Seawater Marine Sediment Seawater Deep Subsurface |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI24006J15134_101602461 | 3300001450 | Marine | MSDSGNSKIYLTEFTWDGLDYSGPNIVSSTLEEAELICESWGCRIVGELTDVIVAEARNETLH* |
KVWGV2_100132996 | 3300002242 | Marine Sediment | MKIYLTEFTFDGLDYTGPHIVSEEKQEAELICASLNCRIVGVLTDVIMANYQLETLH* |
JGI25131J35506_10411582 | 3300002511 | Marine | VIKLYLTEFTWDGVDYSGPNIVAETPEEAELICASLNCRIVGELTDSELMDYESDTLH* |
Ga0065861_10279687 | 3300004448 | Marine | MSDSNGSKIYLTEFTWDGLDYSGPNIVSSTLEEAELICESWGCRIVGELTDVIVAEARNETLH* |
Ga0066224_11517721 | 3300004457 | Marine | MSDSGNSKIYLTEFTWDGLDSSGPNIVSSTLAEAELICESWGCRIVGELTDV |
Ga0066222_10273614 | 3300004460 | Marine | MSDSSGSKIYLTEFTWDGLDYSGPNIVSSTLEEAELICESWGCRIVGELTDVIVAEARNETLH* |
Ga0075466_10042733 | 3300006029 | Aqueous | MSASNDRKIYLTEFTWDGLDYTGPNIVAETHEQAELICENLGCRVVGELTDVIVAEGQNETLH* |
Ga0075441_101114801 | 3300006164 | Marine | MTEFTWDGLDYSGPNIVAETPEEAELICESFGCRIVGELTDVIVAEDEIETLH* |
Ga0098037_10173814 | 3300006737 | Marine | MNKKIFLTEFTWDGTDYTGPNIVADTHEQAELICENLGCRVVGELTDVIVAEEGYETLH* |
Ga0098044_13418583 | 3300006754 | Marine | MNDKKIFLTEFTWDGADYTGPNIVADTHEQAELICESLGCRVVGELTDV |
Ga0098055_10252284 | 3300006793 | Marine | VNMNDKKIFLTEFTWDGVDYTGPNIVANTHEQAELICESLGCRVVGELTDVIVADGGDGDGYETLH* |
Ga0070750_101039033 | 3300006916 | Aqueous | MSASNDRKIFLTEFTWDGLDYTGPNIVAETHEQAELICENLGCRVVGELTDVIVAEGQNETLH* |
Ga0070746_104151082 | 3300006919 | Aqueous | SSGSKIYLTEFTWDGLDYSGPNIVSSTLAEAELICESWGCRIVGELTDVIVAKARNETLH |
Ga0070748_11933911 | 3300006920 | Aqueous | MSASNDRKIYLTEFTWDGLDYTGPNIVAETHEQAELICENLGCRVVGELTDV |
Ga0098036_10209213 | 3300006929 | Marine | VIKLYLTEFTWDGVDYSGPNIVATTKEEAKLICESLNCRIVGELTDSELMDYESDTLH* |
Ga0098036_10622314 | 3300006929 | Marine | MNKKIFLTEFTWDGADYCGPNIVADTHEQAELICENLGCRVVGELTDV |
Ga0099847_11139574 | 3300007540 | Aqueous | MSDSSGSKIYLTEFTWDGLDYSGPNIVSSTLEEAELIC |
Ga0099847_12467442 | 3300007540 | Aqueous | MVSMSASNDRKIFLTEFTWDGLDYTGPNIVAETHEQAELICENLGCRVVGELTDVIVAEGQNETLH* |
Ga0110931_10115734 | 3300007963 | Marine | MNKKIFLTEFTWDGADYCGPNIVADTHEQAELICESLGCRVVGELTDVIVAEEGYETLH* |
Ga0114898_10391744 | 3300008216 | Deep Ocean | MNKKIFLTEFTWDGTDYTGPNIVADTHEQAELICENLGCRVVGELTDVIVAEERNETLH* |
Ga0114899_10527622 | 3300008217 | Deep Ocean | VIKLYLTEFTWDGVDYSGPNIVAETKREAELICESLNCRIVGELTDSELMDYESDTLH* |
Ga0114899_10837913 | 3300008217 | Deep Ocean | MENMSKKIFLTEFTWDGTDYTGPNIVADTHEQAELICENLGCRVVGELTDVIVAEEGYETLH* |
Ga0114899_10854703 | 3300008217 | Deep Ocean | SLAMKIYLTEFTWDGIDYSGPNIVAETKEGATLICEGLNCRIVGELADVIMADYDIETLH |
Ga0114899_10945382 | 3300008217 | Deep Ocean | MNKKIFLTEFTWDGTDYTGPNIVADTHEQAELICESLGCRVVGELTDVIVAEEGYETLH* |
Ga0114899_12750681 | 3300008217 | Deep Ocean | DYTGPHIVAEEKQEAELICASLNCRIVGVLTDVIMANYQLETLH* |
Ga0114904_10370332 | 3300008218 | Deep Ocean | VIKLYLTEFTWDGVDYSGPNIVATTKEEAELICESLNCRIVGELTDSELMDYESDTLH* |
Ga0114904_10448651 | 3300008218 | Deep Ocean | MNKKIFLTEFTWDGTDYTGPNIVADTHEQAELICESLGCRVVG |
Ga0114904_11599042 | 3300008218 | Deep Ocean | MSASNDKKIFLTEFTWDGLDYTGPNIVADTHEQAELICESLGCRVVGELTDVIVAEERNETLH* |
Ga0114905_10593873 | 3300008219 | Deep Ocean | MNKKIFLTEFTWDGTDYTGPNIVADTHEQAELICESLGCRVVGELTDVIVAEGRNETLH* |
Ga0114910_10896922 | 3300008220 | Deep Ocean | LGSGQVIKLYLTEFTWDGVDYSGPNIVATTKEEAELICESLNCRIVGELTDSELMDYESDTLH* |
Ga0114910_11399892 | 3300008220 | Deep Ocean | MANMNKKIFLTEFTWDGTDYTGPNIVADTHEQAELICENLGCRVVGELTDVIVAEERNETLH* |
Ga0114909_11744391 | 3300009414 | Deep Ocean | MSASNDKKIFLTEFTWDGTDYTGPNIVADTHEQAELICESLGCRVVGELTDVIVAEERNETLH* |
Ga0114908_11144163 | 3300009418 | Deep Ocean | MNKKIFLTEFTWDGTDYTGPNIVADTHEQAELICESLGCRVVGELTDVIVAEERNETLH* |
Ga0114998_100147159 | 3300009422 | Marine | MSDSSGSKIYLTEFTWDGLDYSGPNIVSSTLAEAELICESWGCRIVGELTDV |
Ga0114915_11157471 | 3300009428 | Deep Ocean | NMSSSKIYLTEFTWDGLDYSGPNIVASELEEAELICESWGCRIVGELTDVIVVADKIETLH* |
Ga0114932_100162847 | 3300009481 | Deep Subsurface | VIKLYLTEFTWDGVDYSGPNIVATTKEEAELICESLNCRIVGELTDSEL |
Ga0114932_100202045 | 3300009481 | Deep Subsurface | MKIYLTEFTFDGLDYTGPHIVAEEKQEAELICASLNCRIVGVLTDVIMANYQLETLH* |
Ga0114932_100838334 | 3300009481 | Deep Subsurface | VIKLYLTEFTWDGVDYSGPNIVAETKREAELICESLNCRIVGELTDSELVDYESDTLH* |
Ga0114932_107292711 | 3300009481 | Deep Subsurface | MNKKIFLTEFTWDGTDYTGPNIVADTHEQAELICESLGCRVVGELTDV |
Ga0114900_11475281 | 3300009602 | Deep Ocean | MKIYLTEFTWDGIDYSGPNIVAETKEGATLICEGLNCRIVGELADVIMADYDIETLH* |
Ga0114901_11533481 | 3300009604 | Deep Ocean | MSASNDKKIFLTEFTWDGTDYTGPNIVADTHEQAELICESLGCRV |
Ga0114906_11830081 | 3300009605 | Deep Ocean | MSASNDKKIFLTEFTWDGLDYTGPNIVADTHEQAELICESLGCRVVG |
Ga0114906_12512722 | 3300009605 | Deep Ocean | MASMNKKIFLTEFTWDGTDYTGPNIVADTHEQAELICESLGCRVVGELTDVIVAEGRNETLH* |
Ga0105228_1235562 | 3300009613 | Marine Oceanic | VIKLYLTEFTWDGVDYIGPDIVATTKEEAELICESLNCRIVGELIDSELIDYESDTLH* |
Ga0114933_103503361 | 3300009703 | Deep Subsurface | KIFLTEFTWDGTDYTGPNIVADTHEQAELICESLGCRVVGELTDVIVAEEGYETLH* |
Ga0115001_100238761 | 3300009785 | Marine | MSDSNGSKIYLTEFTWDGLDYSGPNIVSSTLAEAELICESWGCRIVGELTDVIVAEARNETLH |
Ga0098049_12577143 | 3300010149 | Marine | MSDKKIFITEFTWDGVDYTGPNIVANTHEQAELICESLGCRVVG |
Ga0151674_10401772 | 3300011252 | Marine | MSASNDRKIFLTEFTWDGLDYTGPNIVAETHEQAELICENLGCRVVGELTDVIVAEGRNETLH* |
Ga0181403_10967223 | 3300017710 | Seawater | MSASNDRKIFLTEFTWDGLDYTGPNIVAETHEQAELICENLGCRVVGELTDVIVAEGRN |
Ga0181391_10724823 | 3300017713 | Seawater | MVSMSASNDRKIFLTEFTWDGLDYTGPNIVAETHEQAELICENLGCRVVGELTDVIVAEDTYETLH |
Ga0181412_10171301 | 3300017714 | Seawater | MSASNDRKIFLTEFTWDGLDYTGPNIVAETHEQAELICENLGCRVVGELTDVIVAEGRNETLH |
Ga0181417_10386312 | 3300017730 | Seawater | MSASNDRKIYLTEFTWDGLDYTGPNIVAETHEQAELICENLGCRVVGELTDVIVAEGRNETLH |
Ga0181417_10798941 | 3300017730 | Seawater | MSASSNKKIFITEFTWDGTDYTGPNIVAETHEQAELICENLGCREVGELTDVIVA |
Ga0181416_10104994 | 3300017731 | Seawater | MSASSNKKIFITEFTWDGTDYTGPNIVAETHEQAELICENLGCRVVGELTDVIVAEDTYETLH |
Ga0181415_11112521 | 3300017732 | Seawater | RKIFLTEFTWDGLDYTGPNIVAETHEQAELICENLGCRVVGELTDVIVAEGRNETLH |
Ga0187218_10560661 | 3300017737 | Seawater | MSASNDRKIFLTEFTWDGLDYTGPNIVAETHEQAELICENLGCRVVGELTDVIV |
Ga0187218_10731383 | 3300017737 | Seawater | ASNDRKIFLTEFTWDGLDYTGPNIVAETHEQAELICENLGCRVVGELTDVIVAEGRNETL |
Ga0181428_10421781 | 3300017738 | Seawater | VSMSASSNKKIFITEFTWDGTDYTGPNIVAETHEQAELICENLGCRVVGELTDVIVAEGRNETLH |
Ga0181389_10092114 | 3300017746 | Seawater | MSASDDRKIFLTEFTWDGLDYTGPNIVAETHEQAELICENLGCRVVGELTDVIVAEVRNETLH |
Ga0181411_10211451 | 3300017755 | Seawater | GTDYTGPNIVAETHEQAELICENLGCRVVGELTDVIVAEDTYETLH |
Ga0181411_10293494 | 3300017755 | Seawater | MSASNDRKIYLTEFTWDGLDYTGPNIVAETHEQAELICENLGCRVV |
Ga0181422_12178193 | 3300017762 | Seawater | MVSMSASSNKKIFITEFTWDGTDYTGPNIVAETHEQAELICENLGCRVVGELTDVIVAE |
Ga0181406_10289714 | 3300017767 | Seawater | MSASNDRKIYLTEFTWDGLDYTGPNIVAETHEQAELICENLGCRVVGELTDVIVAEVRNETLH |
Ga0181425_10745904 | 3300017771 | Seawater | MSASSNKKIFITEFTWDGTDYTGPNIVAETHEQAELICENLGCRVVGEL |
Ga0181430_12156162 | 3300017772 | Seawater | VSMSKRKIYMTEFTWYGVDYCGISIVSQTLEQAELICESYGCRIVGELTDVIVAGDGYATLH |
Ga0181423_10463424 | 3300017781 | Seawater | MSASNDRKIYLTEFTWDGLDYTGPNIVAETHEQAELICENLGCRVVGEL |
Ga0181424_101624023 | 3300017786 | Seawater | TEFTWDGLDYTGPNIVAETHEQAELICENLGCRVVGELTDVIVAEGRNETLH |
Ga0224906_11491692 | 3300022074 | Seawater | MSASNDRKIFLTEFTWDGLDYTGPNIVAETHEQAELICENLGCRVVGELTDVIVAEERNETLH |
Ga0209992_100275002 | 3300024344 | Deep Subsurface | MKIYLTEFTFDGLDYTGPHIVAEEKQEAELICASLNCRIVGVLTDVIMANYQLETLH |
Ga0209992_102497731 | 3300024344 | Deep Subsurface | MASMNKKIFLTEFTWDGTDYTGPNIVADTHEQAELICESLGCRVVGELTDV |
Ga0208157_10125355 | 3300025086 | Marine | MNKKIFLTEFTWDGTDYTGPNIVADTHEQAELICENLGCRVVGELTDVIVAEEGYETLH |
Ga0208669_10385855 | 3300025099 | Marine | MNKKIFLTEFTWDGTDYTGPNIVADTHEQAELICENLGCRVVGELTDV |
Ga0209535_10168627 | 3300025120 | Marine | MSASNDRKIFLTEFTWDGLDYTGPNIVAETHEQAELICENLGCRVVGELTDVIVAEVRNETLH |
Ga0209644_10041565 | 3300025125 | Marine | VIKLYLTEFTWDGVDYSGPNIVAETPEEAELICASLNCRIVGELTDSELMDYESDTLH |
Ga0208919_10636473 | 3300025128 | Marine | VIKLYLTEFTWDGVDYSGPNIVATTKEEAKLICESLNCRIVGELTDSELMDYESDTLH |
Ga0209336_100179994 | 3300025137 | Marine | MSDSSGSKIYLTEFTWDGLDYSGPNIVSSTLEEAELICESWGCRIVGELTDVIVAEARNETLH |
Ga0209634_10326277 | 3300025138 | Marine | MSDSGSKIYLTEFTWDGLDYSGPNIVSSTLEEAELICESWGCRIVGELTDVIVAEARNETLH |
Ga0209634_10442974 | 3300025138 | Marine | MSDSGSKIYLTEFTWDGLDYSGPNIVSSTLEEAELICESWGCRIVGELTDVI |
Ga0209337_11437624 | 3300025168 | Marine | SSGSKIYLTEFTWDGLDYSGPNIVSSTLEEAELICESWGCRIVGELTDVIVAEARNETLH |
Ga0209337_12122223 | 3300025168 | Marine | MSDSGSKIYLTEFTWDGLDYSGPNIVSSTLEEAELICESWGCRIVGELTDV |
Ga0208182_10474021 | 3300025251 | Deep Ocean | MANMNKKIFLTEFTWDGTDYTGPNIVADTHEQAELICESLGCRVVGELTDVIVAEDGYETLH |
Ga0208029_10387844 | 3300025264 | Deep Ocean | MNKKIFLTEFTWDGTDYTGPNIVADTHEQAELICESLGCRVVGELTDVIVAEEGYETLH |
Ga0208029_10794732 | 3300025264 | Deep Ocean | VIKLYLTEFTWDGVDYSGPNIVATTKEEAELICESLNCRIVGELTDSELMDYESDTLH |
Ga0208814_10292243 | 3300025276 | Deep Ocean | MSSSKIYLTEFTWDGLDYSGPNIVASELEEAELICESWGCRIVGELTDVIVVADKIETLH |
Ga0208449_10611771 | 3300025280 | Deep Ocean | MNKKIFLTEFTWDGTDYTGPNIVADTHEQAELICESLGCRVVGELTDVIVAEERNETLH |
Ga0208449_11217662 | 3300025280 | Deep Ocean | LGSGQVIKLYLTEFTWDGVDYSGPNIVATTKEEAELICESLNCRIVGELTDSELMDYESDTLH |
Ga0208315_10578443 | 3300025286 | Deep Ocean | TEFTWDGIDYSGPNIVAETKEGATLICEGLNCRIVGELADVIMADYDIETLH |
Ga0208315_10851003 | 3300025286 | Deep Ocean | VIKLYLTEFTWDGVDYSGPNIVAETKREAELICESLNCRIVGELTDSELVDYESDTLH |
Ga0208315_11323022 | 3300025286 | Deep Ocean | MANMNKKIFLTEFTWDGTDYTGPNIVADTHEQAELICESLGCRVVGELTDVIVAEEGYETLH |
Ga0208316_10437732 | 3300025296 | Deep Ocean | MNKKIFLTEFTWDGTDYTGPNIVAETHEQAELICESLGCRVVGELTDVIVAEERNETLH |
Ga0208181_10217045 | 3300025300 | Deep Ocean | MANMNKKIFLTEFTWDGTDYTGPNIVADTHEQAELICESLGCRVVGELT |
Ga0208684_10329002 | 3300025305 | Deep Ocean | MANMNKKIFLTEFTWDGTDYTGPNIVADTHEQAELICESLGCRVVGELTDVIVAEGRNETLH |
Ga0208684_10559803 | 3300025305 | Deep Ocean | DYSGPNIVATTKEEAELICESLNCRIVGELTDSELMDYESDTLH |
Ga0208148_10176293 | 3300025508 | Aqueous | MSASNDRKIYLTEFTWDGLDYTGPNIVAETHEQAELICENLGCRVVGELTDVIVAEGQNETLH |
Ga0208451_10080961 | 3300026103 | Marine Oceanic | MSNRKIYMTEFTWDGVDYSGPNIVAETPEEAELICESFGCRIVGELTDVIVAEDEIETLH |
Ga0209710_11155122 | 3300027687 | Marine | MSDSSGSKIYLTEFTWDGLDYSGPNIVSSTLAEAELICESWGCRIVGELTDVIVAEARNETLH |
Ga0209815_10222904 | 3300027714 | Marine | MTEFTWDGLDYSGPNIVAETPEEAELICESFGCRIVGELTDVIVAEDEIETLH |
Ga0209711_104338063 | 3300027788 | Marine | MSDSNGSKIYLTEFTWDGLDYSGPNIVSSTLAEAELICESWGCRIVGELTDV |
Ga0256382_10477961 | 3300028022 | Seawater | VIKLYLTEFTWDGVDYSGPNIVAETKREAELICESLNCRIVGELTDSELMDYESD |
Ga0256382_10887512 | 3300028022 | Seawater | LTEFTWDGTDYTGPNIIADTHDQAELICESLGCRVVGELTDVIVAEDGYETLH |
Ga0256382_11647911 | 3300028022 | Seawater | MNKKIFLTEFTWDGTDYTGPNIVADTHEQAELICENLGCRVVGEL |
Ga0256383_1227092 | 3300028448 | Seawater | VIKLYLTEFTWDGVDYSGPNIVAETKREAELICESLNCRIVGELTDSELMDYESDTLH |
Ga0302121_100469332 | 3300031626 | Marine | MSDSNGSKIYLTEFTWDGLDYSGPNIVSSTLEEAELICESWGCRIVGELTDVIVAEARNETLH |
Ga0302136_10592633 | 3300031676 | Marine | SNGSKIYLTEFTWDGLDYSGPNIVSSTLAEAELICESWGCRIVGELTDVIVAEARNETLH |
Ga0310345_100338205 | 3300032278 | Seawater | MTEFTWDGIDYCGPNIVAQTPEQAELICESFGCRIVGELTNVIVAGDEYATLH |
Ga0310342_1006439854 | 3300032820 | Seawater | MSNRKIYMTEFTWDGIDYCGPNIVAQTPEQAELICESFGCRIVGELTNVIVAGDEYATLH |
Ga0326755_031962_86_259 | 3300034628 | Filtered Seawater | MKIYLTEFTWDGTDYTGPNIVAQTPEEAEAICESLNCRIVGELSDVIMADYELETLH |
Ga0326741_003428_961_1134 | 3300034654 | Filtered Seawater | MKIYLTEFTWDGLDYTGPNIVAETLQEAELVCESFGCQIVGELTDVIMAENKIDTLH |
Ga0326741_030797_206_367 | 3300034654 | Filtered Seawater | MTEFTWDGLDYSGPNIVAQTPEEAELICESFGCRIVGELTDVIVAEDEIETLH |
Ga0326748_036804_529_678 | 3300034656 | Filtered Seawater | MKIYLTEFTWDGLDYTGPNIVAETLQEAELVCESFGCQIVGELTDVIMAE |
Ga0326748_049196_421_594 | 3300034656 | Filtered Seawater | MKIYLTEFTWDGAEYSGPNIVAKTLEEAKLICESFGCRIVGELTDVIVAEDEIETLH |
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