Metagenome / Metatranscriptome Family F086077

Basic Information
Family ID	F086077
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	49 residues
Representative Sequence	MDTNERQIALSVLESLRGDLVYAHLNNGSRVLDVADLRQYIYEQ
Number of Associated Samples	99
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	85.59 %
% of genes near scaffold ends (potentially truncated)	95.50 %
% of genes from short scaffolds (< 2000 bps)	88.29 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Most Common Taxonomy
Group	Unclassified (61.261 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (10.811 % of family members)
Environment Ontology (ENVO)	Unclassified (15.315 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.946 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.61% β-sheet: 0.00% Coil/Unstructured: 51.39%
Feature Viewer

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Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF01138	RNase_PH	3.60
PF00196	GerE	2.70
PF03725	RNase_PH_C	2.70
PF00072	Response_reg	1.80
PF00166	Cpn10	1.80
PF13365	Trypsin_2	1.80
PF06348	DUF1059	0.90
PF00892	EamA	0.90
PF07606	DUF1569	0.90
PF05598	DUF772	0.90
PF00069	Pkinase	0.90
PF07676	PD40	0.90
PF08281	Sigma70_r4_2	0.90
PF00343	Phosphorylase	0.90
PF16396	DUF5005	0.90
PF02627	CMD	0.90
PF13414	TPR_11	0.90
PF00754	F5_F8_type_C	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0689	Ribonuclease PH	Translation, ribosomal structure and biogenesis [J]	6.31
COG1185	Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)	Translation, ribosomal structure and biogenesis [J]	6.31
COG2123	Exosome complex RNA-binding protein Rrp42, RNase PH superfamily	Intracellular trafficking, secretion, and vesicular transport [U]	6.31
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.60
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	1.80
COG0058	Glucan phosphorylase	Carbohydrate transport and metabolism [G]	0.90
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.90
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.90

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.26 %
All Organisms	root	All Organisms	38.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.26 %
cellular organisms	root	All Organisms → cellular organisms	37.84 %
Viruses	superkingdom	All Organisms → Viruses	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.26 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	37.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.26 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	27.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.60 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.26 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	16.22 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.60 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.80 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.26 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.22 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.60 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.80 %
Candidatus Eisenbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria	0.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.26 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.22 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.60 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.80 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	0.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.26 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.22 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.60 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.90 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	0.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001546\|JGI12659J15293_10129125	Not Available	550	Open in IMG/M
3300002245\|JGIcombinedJ26739_101724718	Not Available	526	Open in IMG/M
3300003505\|JGIcombinedJ51221_10301470	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300004479\|Ga0062595_100098017	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1548	Open in IMG/M
3300005172\|Ga0066683_10208266	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300005177\|Ga0066690_11004314	Not Available	524	Open in IMG/M
3300005180\|Ga0066685_10209855	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	1337	Open in IMG/M
3300005437\|Ga0070710_11086340	Not Available	587	Open in IMG/M
3300005441\|Ga0070700_101952910	Not Available	508	Open in IMG/M
3300005445\|Ga0070708_100138628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2255	Open in IMG/M
3300005467\|Ga0070706_100211591	Not Available	1811	Open in IMG/M
3300005467\|Ga0070706_100601305	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300005471\|Ga0070698_100140263	Not Available	2369	Open in IMG/M
3300005542\|Ga0070732_10077559	All Organisms → cellular organisms → Bacteria	1942	Open in IMG/M
3300005546\|Ga0070696_101347521	Not Available	607	Open in IMG/M
3300005553\|Ga0066695_10170443	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1360	Open in IMG/M
3300005563\|Ga0068855_101913936	Not Available	600	Open in IMG/M
3300005617\|Ga0068859_100871319	Not Available	986	Open in IMG/M
3300005995\|Ga0066790_10032010	Not Available	2292	Open in IMG/M
3300006028\|Ga0070717_10878522	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	816	Open in IMG/M
3300006047\|Ga0075024_100173309	Not Available	996	Open in IMG/M
3300006047\|Ga0075024_100434950	Not Available	675	Open in IMG/M
3300006059\|Ga0075017_100201549	Not Available	1440	Open in IMG/M
3300006059\|Ga0075017_100836873	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300006059\|Ga0075017_101591296	Not Available	516	Open in IMG/M
3300006059\|Ga0075017_101608212	Not Available	513	Open in IMG/M
3300006173\|Ga0070716_100763436	Not Available	745	Open in IMG/M
3300006354\|Ga0075021_10789346	Not Available	613	Open in IMG/M
3300006791\|Ga0066653_10602361	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300006797\|Ga0066659_11818949	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300006854\|Ga0075425_101902723	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300006893\|Ga0073928_10207321	Not Available	1530	Open in IMG/M
3300006893\|Ga0073928_10556856	Not Available	815	Open in IMG/M
3300007076\|Ga0075435_100668375	Not Available	902	Open in IMG/M
3300009012\|Ga0066710_102517965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	743	Open in IMG/M
3300009098\|Ga0105245_11816210	Not Available	662	Open in IMG/M
3300009137\|Ga0066709_100256366	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2346	Open in IMG/M
3300009162\|Ga0075423_10533925	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1235	Open in IMG/M
3300009525\|Ga0116220_10450085	Not Available	580	Open in IMG/M
3300009545\|Ga0105237_12662803	Not Available	511	Open in IMG/M
3300009700\|Ga0116217_10662914	Not Available	647	Open in IMG/M
3300010371\|Ga0134125_11450336	Not Available	748	Open in IMG/M
3300010373\|Ga0134128_10688132	Not Available	1136	Open in IMG/M
3300010375\|Ga0105239_10485415	Not Available	1404	Open in IMG/M
3300010379\|Ga0136449_104278823	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
3300010397\|Ga0134124_10662829	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1029	Open in IMG/M
3300010401\|Ga0134121_12724106	Not Available	539	Open in IMG/M
3300011269\|Ga0137392_11396377	Not Available	559	Open in IMG/M
3300012004\|Ga0120134_1012486	Not Available	1305	Open in IMG/M
3300012349\|Ga0137387_11096206	Not Available	567	Open in IMG/M
3300012927\|Ga0137416_10008204	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6107	Open in IMG/M
3300012951\|Ga0164300_10369847	Not Available	777	Open in IMG/M
3300012958\|Ga0164299_11404567	Not Available	540	Open in IMG/M
3300012960\|Ga0164301_10610557	Not Available	807	Open in IMG/M
3300012960\|Ga0164301_11555309	Not Available	547	Open in IMG/M
3300012985\|Ga0164308_10446051	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1070	Open in IMG/M
3300012985\|Ga0164308_11341510	Not Available	651	Open in IMG/M
3300012985\|Ga0164308_12229561	Not Available	510	Open in IMG/M
3300012986\|Ga0164304_10242773	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1203	Open in IMG/M
3300013297\|Ga0157378_10494803	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1220	Open in IMG/M
3300013306\|Ga0163162_10729505	Not Available	1111	Open in IMG/M
3300014325\|Ga0163163_12925419	Not Available	533	Open in IMG/M
3300014489\|Ga0182018_10407413	Not Available	727	Open in IMG/M
3300017927\|Ga0187824_10144508	Not Available	786	Open in IMG/M
3300017936\|Ga0187821_10444678	Not Available	537	Open in IMG/M
3300017943\|Ga0187819_10353478	Not Available	849	Open in IMG/M
3300017955\|Ga0187817_10143435	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1517	Open in IMG/M
3300018007\|Ga0187805_10114724	All Organisms → cellular organisms → Bacteria	1221	Open in IMG/M
3300018012\|Ga0187810_10314283	Not Available	649	Open in IMG/M
3300020001\|Ga0193731_1131909	Not Available	627	Open in IMG/M
3300020004\|Ga0193755_1123683	Not Available	805	Open in IMG/M
3300020579\|Ga0210407_10112757	Not Available	2074	Open in IMG/M
3300020583\|Ga0210401_11359079	Not Available	568	Open in IMG/M
3300021088\|Ga0210404_10746483	Not Available	559	Open in IMG/M
3300021402\|Ga0210385_11520914	All Organisms → cellular organisms → Bacteria → Acidobacteria	511	Open in IMG/M
3300021403\|Ga0210397_10728307	Not Available	763	Open in IMG/M
3300021420\|Ga0210394_10368542	All Organisms → cellular organisms → Bacteria → Acidobacteria	1263	Open in IMG/M
3300021559\|Ga0210409_10356416	Not Available	1313	Open in IMG/M
3300025903\|Ga0207680_10454094	Not Available	910	Open in IMG/M
3300025905\|Ga0207685_10826964	Not Available	511	Open in IMG/M
3300025906\|Ga0207699_10293869	Not Available	1133	Open in IMG/M
3300025922\|Ga0207646_10201763	All Organisms → cellular organisms → Bacteria	1797	Open in IMG/M
3300025934\|Ga0207686_10334068	Not Available	1136	Open in IMG/M
3300026291\|Ga0209890_10230540	Not Available	583	Open in IMG/M
3300026291\|Ga0209890_10267512	Not Available	526	Open in IMG/M
3300026328\|Ga0209802_1134702	All Organisms → Viruses → Predicted Viral	1067	Open in IMG/M
3300026360\|Ga0257173_1072806	Not Available	509	Open in IMG/M
3300026998\|Ga0208369_1023206	All Organisms → cellular organisms → Bacteria → Acidobacteria	606	Open in IMG/M
3300027603\|Ga0209331_1007538	Not Available	2892	Open in IMG/M
3300027645\|Ga0209117_1133343	Not Available	657	Open in IMG/M
3300027651\|Ga0209217_1170049	Not Available	597	Open in IMG/M
3300027684\|Ga0209626_1163069	Not Available	590	Open in IMG/M
3300027894\|Ga0209068_10175460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1170	Open in IMG/M
3300027894\|Ga0209068_10655715	Not Available	613	Open in IMG/M
3300027898\|Ga0209067_10602412	Not Available	631	Open in IMG/M
3300027911\|Ga0209698_10754669	Not Available	737	Open in IMG/M
3300028798\|Ga0302222_10015789	All Organisms → cellular organisms → Bacteria → Proteobacteria	3097	Open in IMG/M
3300028828\|Ga0307312_11184356	Not Available	505	Open in IMG/M
3300029636\|Ga0222749_10125329	All Organisms → cellular organisms → Bacteria → Acidobacteria	1230	Open in IMG/M
3300029943\|Ga0311340_10786627	All Organisms → cellular organisms → Bacteria → Acidobacteria	804	Open in IMG/M
3300030057\|Ga0302176_10007830	All Organisms → cellular organisms → Bacteria → Proteobacteria	4082	Open in IMG/M
3300030618\|Ga0311354_11021037	All Organisms → cellular organisms → Bacteria → Acidobacteria	761	Open in IMG/M
3300031028\|Ga0302180_10019049	All Organisms → cellular organisms → Bacteria → Proteobacteria	4473	Open in IMG/M
3300031231\|Ga0170824_126044974	All Organisms → cellular organisms → Bacteria → Acidobacteria	1611	Open in IMG/M
3300031231\|Ga0170824_126289357	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300031234\|Ga0302325_10097822	All Organisms → cellular organisms → Bacteria → Acidobacteria	5511	Open in IMG/M
3300031236\|Ga0302324_100145297	All Organisms → cellular organisms → Bacteria → Proteobacteria	3899	Open in IMG/M
3300031716\|Ga0310813_11106702	Not Available	726	Open in IMG/M
3300031720\|Ga0307469_10061991	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2424	Open in IMG/M
3300032180\|Ga0307471_103654759	All Organisms → cellular organisms → Bacteria → Acidobacteria	544	Open in IMG/M
3300033433\|Ga0326726_10402391	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1299	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.29%
Host-Associated	Host-Associated	11.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.17%
Aquatic	Environmental → Aquatic	17.12%
Plants	Host-Associated → Plants	11.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.96%
Sediment	Environmental → Aquatic → Sediment	9.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.11%
Peat	Environmental → Terrestrial → Peat	7.21%
Freshwater	Environmental → Aquatic → Freshwater	5.41%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.70%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.80%
Roots	Host-Associated → Plants → Roots	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.34%
Loam	Environmental → Terrestrial → Soil → Loam	18.02%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	7.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.21%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.41%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.60%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.70%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.80%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.21%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	7.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.21%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.41%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.70%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.90%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.90%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.81%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	9.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.31%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.31%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.41%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.60%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.70%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.70%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.80%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.90%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.90%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.90%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012004	Permafrost microbial communities from Nunavut, Canada - A30_5cm_6M	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026360	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-B	Environmental	Open in IMG/M
3300026998	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF046 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12659J15293_101291251	3300001546	Forest Soil	METNTRQIALSLLENLREDLACARLTNGRRILDVADLRQYLSEQIVRIRRTGLAMGG
JGIcombinedJ26739_1017247182	3300002245	Forest Soil	MDTNTRQIALSVLETLREDLAYARLNNGRRVLDVADLRQYIYEQMGRIRT
JGIcombinedJ51221_103014701	3300003505	Forest Soil	MDINQRQMALSLLEALREDLMYARLNNGTRILDVADLRQYIY
Ga0062595_1000980171	3300004479	Soil	MDANEKQIALSVLESLRADLMYAHLKNGSRILDVADLRQYIYEMMSRIRTNRPLNV*
Ga0066683_102082661	3300005172	Soil	MNTNERQIALSVLEGLRADLLYARLNNGTGIIDIADLRQYI
Ga0066690_110043142	3300005177	Soil	MDTNQRQIALSVLESLRDDLMYAHLNNGGRVLDVADLRQYIYEQIARIRTNAFVIDGLYGNDN
Ga0066685_102098552	3300005180	Soil	MNTNERQIALSVLEGLRADLLYARLNNGTGIIDIADLRQYIYELMG
Ga0070710_110863402	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VDVNQRQIALSLLETLRADLMYAHLNSGSRVVDVADLRQYIYEQMSRIRTNAFVLEGLFGTDGHT
Ga0070700_1019529101	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MDTNERQIALSVLESLRGDLVYAHLNNGSRVLDVADLRQYIYEQMNLIRTNALTMCE
Ga0070708_1001386282	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MDTNQRQIALSVLEALREDLTYAHLNNGSRVVDVADLRQYIYEQM
Ga0070706_1002115911	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MVVRNVVRSGACVMDTNQRQIALSVLESLRDDLMYAHLNNGGRVLDVADLRQYIYEQIARIRTNAFVMDG
Ga0070706_1006013053	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	METNQRQIALSVLESLREDLMYAHLNNGGRVLDVADLRQYIYEQIAR
Ga0070698_1001402631	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MASLSVLESLREDLMYAHLNNGGRVLDVADLRQYIYEQIARIRT
Ga0070732_100775594	3300005542	Surface Soil	MDINERQIALSVLENLREDLAYARLNNGSRVLDVADLRQYIYEQM
Ga0070696_1013475211	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MDLNQRQIALSLLEGLREDLIYAHLNNGGRILDLADLRQYIYE
Ga0066695_101704433	3300005553	Soil	MDTNQRQIALSVLEALREDLMYAHLNNGGRVVDVADLRQYIYEQMGRITPD*
Ga0068855_1019139361	3300005563	Corn Rhizosphere	MNTNEKQIALSVLESLRADLMYAHLKNGSRILDVADL
Ga0068859_1008713191	3300005617	Switchgrass Rhizosphere	VDVNQRQIALSLLENLREDLTYAHLNNGSRILDVADLRQYIYEQM
Ga0066790_100320101	3300005995	Soil	MDTNEKQIALSVLESLRADLMYAHLKNGSRILDVADLRQYIYEMMAG*
Ga0070717_108785221	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MDTNQRQIALSVLESLREDLVYAHLNDGRRILDVADLRQYLYEQMGRIRTNAFALAGLYGNDN
Ga0075024_1001733091	3300006047	Watersheds	VDANQRQIALSVLECLRGDLVYAHLNNGSRVMDVADLRQYLYEQMDRIR
Ga0075024_1004349502	3300006047	Watersheds	MNMNERQIALSVLESLRGDLTYAHLNNGSRVLDVADLRQYIYE
Ga0075017_1002015494	3300006059	Watersheds	MDMNERQIALSVLENLREDLTYARLNNGSRILDVADFRQYLYE
Ga0075017_1008368732	3300006059	Watersheds	MDTNERQLAISVLGCLREDLAYAHLNNGSRVLDVADLRQYLYEQMGRIR
Ga0075017_1015912961	3300006059	Watersheds	MTTNERQIALSVLESLRGDLIYAHLNDGGRVLDIADLRQFIYEQM
Ga0075017_1016082121	3300006059	Watersheds	MDTNQRQIALSVLESLRDDLVYAHLNNGRRILDVADLRQYLYEQM
Ga0070716_1007634361	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MDTNEKQIALSVLESLRADLMYAHLKNGSRILDVADLRQYIYEMMG
Ga0075021_107893461	3300006354	Watersheds	MDVNQRQIALSVLESLRADLMYAHLNSGSRVLDVADLRQYIYEQMGRIRTNAFVVD
Ga0066653_106023611	3300006791	Soil	MNTNERQIALSVLEGLRADLLYARLNNGTGIIDIADLRQYIYELMGRI
Ga0066659_118189492	3300006797	Soil	MLFAVERVLMETNQRQIALSVLESLRDDLMYAHLNNGGRVLDVADL
Ga0075425_1019027231	3300006854	Populus Rhizosphere	MDTNQRQIALSVLESLRDDLMYAHLNNGGRVLDVADLRQYIYEQ
Ga0073928_102073211	3300006893	Iron-Sulfur Acid Spring	MDTNEKQIALSVLESLRADLMYAHLKNGSRILDVADL
Ga0073928_105568562	3300006893	Iron-Sulfur Acid Spring	MNMNERQIALSVLESLRGDLIYAHLNNGSRVLDVADLRQYIYE
Ga0075435_1006683752	3300007076	Populus Rhizosphere	SVLESLRADLMYAHLKNGSRILDVADLRQYIYEMMSRIRTNRPLNV*
Ga0066710_1025179651	3300009012	Grasslands Soil	MLFAVERVLMETNQRQIALSVLESLRDDLMYAHLNNGGRVLDVADLRQYIYEQIARIRTNAFVMDG
Ga0105245_118162101	3300009098	Miscanthus Rhizosphere	MNTNEKQIALSVLEGLRADLMYAHLKNGSRILDVADLRQYIYEM
Ga0066709_1002563661	3300009137	Grasslands Soil	MNTNERQIALSVLEGLRADLLYARLNNGTGIIDIADLRQYIYELMGRIRTNALV
Ga0075423_105339252	3300009162	Populus Rhizosphere	FLMDTHERQIALSVLESLREDLMYAHLKNGSRILDVADLRQYIYEMMSRIRTNRPLNV*
Ga0116220_104500851	3300009525	Peatlands Soil	MYTNERQIALSVLEGLREDLTYARLNNGSRVLDVADLRQYIYEQMNRIRTTAHVTE
Ga0105237_126628031	3300009545	Corn Rhizosphere	MNTNEKQIALSVLESLRADLIYAHLNSGSRILDVADLRQYIYEMMDRIRTTALEMSD
Ga0116217_106629141	3300009700	Peatlands Soil	MYMNERQVALSVLEGLREDLTYAHLNNGSRILDVADLR
Ga0134125_114503362	3300010371	Terrestrial Soil	FVQNVVRSGVFLMDTNEKQIALSVLESLRADLMYAHLKNGSRILDVADLRQYIYEMMSRIRTNRPLNV*
Ga0134128_106881321	3300010373	Terrestrial Soil	MDTNERQIELTVLESLRGDLVYAHLNNGSRVLDVAD
Ga0105239_104854151	3300010375	Corn Rhizosphere	MDLNQRQIALSLLEGLREDLIYAHLNNGGRILDVADLRQYIY
Ga0136449_1042788231	3300010379	Peatlands Soil	MDTNTRQIALSVLENLREDLAYARMNNGSRVLDVADLRQYIYELMGRIRTTGLAMDGLY
Ga0134124_106628291	3300010397	Terrestrial Soil	MNTNEKQIALSVLESLRADLMYAHLKNGSRILDVADLRQYIYEMMSG
Ga0134121_127241061	3300010401	Terrestrial Soil	MNTNEKQIALSVLESLRADLMYAHLKNGSRILDVADLRQYIYEMMSGIRTNALEMSDLYG
Ga0137392_113963772	3300011269	Vadose Zone Soil	MDMSERQIALSVLESLRGDLIYAHLNNGSRILDVADLRQYIYEQMGRIRTNALVTDGLYG
Ga0120134_10124861	3300012004	Permafrost	MDTNEKQIALSVLESLRADLMYAHLKNGSRILDVADLRQYIYEMMGQIR
Ga0137387_110962061	3300012349	Vadose Zone Soil	MDTNEKQIALSVLESLRADLMYAHLKNGSRILDVADLRQYIY
Ga0137416_100082049	3300012927	Vadose Zone Soil	MDMNERQIALSVLEGLREDLAYARLHNGSRVLDVADFRQYIYEQMGRIRTNAHVTE
Ga0164300_103698471	3300012951	Soil	MDTNERQIALSVLESLRGDLVYAHLNNGSRVLDVADLRQYIYEQ
Ga0164299_114045671	3300012958	Soil	MDVNQRQIALSLLEGLREDLIYAHLNNGSRILDVA
Ga0164301_106105572	3300012960	Soil	MDSNERQIALSVLESLREDLMYAHLKNGSRILDVGDLRQYIYEMM
Ga0164301_115553091	3300012960	Soil	MDVNQRQIALSVLESLRADLMYAHLNNGGRVLDVADLRQYIYEQMGRIRTNAFVLDGL
Ga0164308_104460511	3300012985	Soil	MDINQRQIALSLLEGLREDLIYAHLNNGSRILDVADLRQYIYEQIGRIRTSAFMLDGL
Ga0164308_113415101	3300012985	Soil	MDTNERQIALSVLESLRGDLVYAHLNNGSRVLDVADLRQYIYEQMNLIRTNALTMCEL
Ga0164308_122295611	3300012985	Soil	MDMNERQIALSVLESLRGDLIYAHLKNGSRILDVAD
Ga0164304_102427733	3300012986	Soil	MDINQRQIALSLLEGLREDLIYAHLNNGSRILDVADLR
Ga0157378_104948031	3300013297	Miscanthus Rhizosphere	MNTNEKQIALSVLESLRADLMYAHLKNGSRILDVAD
Ga0163162_107295051	3300013306	Switchgrass Rhizosphere	MDLNQRQIALSLLEGLREDLIYAHLNNGGRILDVADL
Ga0163163_129254191	3300014325	Switchgrass Rhizosphere	MLLDVERFMDNNQRQIALSLFESLRSDLLYAHLKNGRRVLDVADLRQ
Ga0182018_104074131	3300014489	Palsa	MDMNERQIALSVLESLREDLTYAHLKNGSRILDVADL
Ga0187824_101445082	3300017927	Freshwater Sediment	MDINERQIALSVLENLREDLSYARLNNGSRILDVA
Ga0187821_104446781	3300017936	Freshwater Sediment	MDMNERQIALSVLEGLREDLTYARLNNGSRVLDVADFRQYIYEQMA
Ga0187819_103534783	3300017943	Freshwater Sediment	MYTNERQLAISLLEGLREDLAYARLNNGSRILDVADLRQYIYEQISRIRTN
Ga0187817_101434351	3300017955	Freshwater Sediment	MYINERQLAISVLEGLREDLTYAHLNNGSRILDVADLRQYIYEQISRI
Ga0187805_101147241	3300018007	Freshwater Sediment	MDTNQRQIALSVLESLREDLVYAHLNNGRRILDVADLRQYLYEQMARIRTNAFALAGLYG
Ga0187810_103142832	3300018012	Freshwater Sediment	MYTNERQLAISLLEGLREDLAYARLNNGSRILDVADLRQ
Ga0193731_11319091	3300020001	Soil	MDMNERQIALHVLESLREDLVFAHLNNGRPLLFVTDLRQYIYEQM
Ga0193755_11236832	3300020004	Soil	MDTNERQIALSVLESLRGDLVYAHLNNGTRVLDVADLRQYIYEQM
Ga0210407_101127571	3300020579	Soil	MDINQRQIALSLLESLREDLIYAHLNNGSRILDVADLRQYIYEQMGRIRTNAFVMDGLYGNDSH
Ga0210401_113590791	3300020583	Soil	MDTNERQIALSVLESLREDLAYAHLNNGSRILDVADL
Ga0210404_107464832	3300021088	Soil	MNMNERQIALSVLESLRGDLIYAHLNNGSRVLDVADLRQYIYEQMSRIRTT
Ga0210385_115209142	3300021402	Soil	MDINQRQIALSLLEGLREDLMYAHLNNGRRILDVADLRQYIYEQ
Ga0210397_107283071	3300021403	Soil	MNMNERQIALSMLESLRDDLTYARLNNGSRVLDVADLRQYIYEQMGRIRT
Ga0210394_103685422	3300021420	Soil	MDINQRQIALSLLESLREDLIYAHLNNGSRILDVADLRQYLYEQMGRIRTNAFVIDGLYG
Ga0210409_103564163	3300021559	Soil	MDINQRQIALSLLEGLREDLMYAHLNNGSRILDVADLRQYIY
Ga0207680_104540943	3300025903	Switchgrass Rhizosphere	MDTNQRHIALSVLEGLREDLIYAHLNNGGRILDVADLRQYIYEQMGRIR
Ga0207685_108269642	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MNMNQRQIALSLLEGLREDLIYAHLNNGSRILDVADLRQYIYEQMGRIRTNAFVM
Ga0207699_102938691	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MDINQRQMALSLLEGLREDLIYAHLNNGGRILDVADLRQYIYEQMGRIRTNAFM
Ga0207646_102017632	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MDTNQRQIALSVLESLRDDLMYAHLNNGGRVLDVADLRQYIYEQI
Ga0207686_103340682	3300025934	Miscanthus Rhizosphere	MDTNERQIALSVLESLRGDLVYAHLNNGSRVLDVADLR
Ga0209890_102305401	3300026291	Soil	MDMNSRQIAISVLESLREDLTHARLKNGSRVLDVADFRQYLYEQMDRMRTNAY
Ga0209890_102675121	3300026291	Soil	MDMNQRQIALSLLEGLREDLIYARLNNGSRILDVADLRQYIYEQMSRV
Ga0209802_11347021	3300026328	Soil	METNQRQIALSVLESLRDDLMYAHLNNGGRVLDVADLRQYIYEQIARIRTNAFV
Ga0257173_10728061	3300026360	Soil	MDMSERQIALSVLESLRGDLIYAHLNNGSRILDVADLRQYIYEQMGRIRTNALV
Ga0208369_10232063	3300026998	Forest Soil	MDINQRQIALSLLEGLREDLMYAHLNNGSRILDVADLRQ
Ga0209331_10075381	3300027603	Forest Soil	MDTNEKQIALSVLESLRADLMYAHLKNGSRILDVADLRQYIYALTG
Ga0209117_11333433	3300027645	Forest Soil	MDTNQRQIALSLLESLREDLIYAHLNSGSRILDVADLRQYI
Ga0209217_11700492	3300027651	Forest Soil	MDMNERQIALSLLESLRGDLMYAHLNNGGRILDVADLRQYISEQMGRIRTNAVVMSV
Ga0209626_11630691	3300027684	Forest Soil	MDMNQRQIALSLLESLREDLIYAHLNNGSRILDVADLRQYIYEQMGRIRTNALVMHGLYG
Ga0209068_101754603	3300027894	Watersheds	MDMNERQIALSVLESLREDLAYARLNNGSRILDVADLRQYLYEQMGRVR
Ga0209068_106557153	3300027894	Watersheds	MDVNQRQIVLSVLESLRADLMYAHLNSGSRVLDVADLRQYIYEQMGRIRTNAFVVD
Ga0209067_106024122	3300027898	Watersheds	MDTNQRQIALSVLESLREDLVYAHLNNGRRILDVADLRQYLYELMDRIRTSSFAL
Ga0209698_107546691	3300027911	Watersheds	MDLNERQIALSVLESLRADLMYAHLKSGSRILDVADLRQYIYEMMSGIRTNALEMSDLYG
Ga0302222_100157891	3300028798	Palsa	MDTNKRQIALSMLESLRDDLIYAHLNSGSRILDVADLR
Ga0307312_111843561	3300028828	Soil	MDMNQRQIALSLLEGLREDLIYARLNNGSRILDVADLRQYIYEQMNRIRTNAFVLDELYGND
Ga0222749_101253291	3300029636	Soil	MDINERQIALSVLENLREDLAYARLDNGSRILDVADLRQYIYEQMGRIRTNVHVTEA
Ga0311340_107866271	3300029943	Palsa	MDTNERQIALSVLGCLREDLVYAHLNNGSRILDIADLRQYLYEQMGRIRT
Ga0302176_100078301	3300030057	Palsa	MDTNKRQIALSMLESLRDDLIYAHLNSGSRILDVADLRQYIYEQMNRIRTN
Ga0311354_110210372	3300030618	Palsa	MDTNERQIALSVLGCLREDLVYAHLNNGSRILDIADLRQYLYEQMGRIRTSAGVTN
Ga0302180_100190496	3300031028	Palsa	MDTNKRQIALSMLESLRDDLIYAHLNSGSRILDVADLRQYIYEQMN
Ga0170824_1260449743	3300031231	Forest Soil	MNTNQRQIALAVLETLREDLMYGRLNNGSRVLDVA
Ga0170824_1262893572	3300031231	Forest Soil	MDTNQRQIALSVLESLRDDLVYAHLNNGGRILDVADLRQYLYEQMSRIRTNAFALAG
Ga0302325_100978221	3300031234	Palsa	MDTNERQIALSVLGCLREDLVYAHLNNGSRILDIADLRQYLYE
Ga0302324_1001452971	3300031236	Palsa	MDTNKRQIALSMLESLRDDLIYAHLNSGSRILDVADLRQYIYE
Ga0310813_111067023	3300031716	Soil	VDVNQRQIALSLLENLREDLTYAHLNNGSRILDVADLR
Ga0307469_100619913	3300031720	Hardwood Forest Soil	MDTNEKQIALSVLESLRADLMYAHLKNGSRILDVADLRQYIYEMMSRIRTNRPLNV
Ga0307471_1036547591	3300032180	Hardwood Forest Soil	MDMNERQIGLSVLESLRGDLIYAHLKNGSRILDVADLRQYIYEQMSLI
Ga0326726_104023912	3300033433	Peat Soil	MDANDRQIALSVLENLREDLTYAHLKNGSRILDVADLRQYIYEQMGRIRASNKTHSWSS

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086077

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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