Metagenome / Metatranscriptome Family F086002

Basic Information
Family ID	F086002
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	53 residues
Representative Sequence	MRELIGKIPTKDPNITEVVYLSEIVRCLECEQTVPMGIEVVTVK
Number of Associated Samples	101
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	98.13 %
% of genes near scaffold ends (potentially truncated)	87.39 %
% of genes from short scaffolds (< 2000 bps)	87.39 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Most Common Taxonomy
Group	Unclassified (66.667 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil (16.216 % of family members)
Environment Ontology (ENVO)	Unclassified (33.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.946 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 38.89% Coil/Unstructured: 61.11%
Feature Viewer

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Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF01522	Polysacc_deac_1	6.31
PF13417	GST_N_3	1.80
PF11331	zinc_ribbon_12	1.80
PF02803	Thiolase_C	0.90
PF14023	DUF4239	0.90
PF13336	AcetylCoA_hyd_C	0.90
PF04143	Sulf_transp	0.90
PF00903	Glyoxalase	0.90
PF05175	MTS	0.90
PF03480	DctP	0.90
PF04393	DUF535	0.90
PF00528	BPD_transp_1	0.90
PF00753	Lactamase_B	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	6.31
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.90
COG2391	Uncharacterized membrane protein YedE/YeeE, contains two sulfur transport domains	General function prediction only [R]	0.90
COG2990	Outer membrane protein VirK/YbjX involved in antimicrobial peptide resistance, DUF535 family	Function unknown [S]	0.90

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
All Organisms	root	All Organisms	33.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
cellular organisms	root	All Organisms → cellular organisms	33.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	33.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	30.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	27.93 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9.91 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.90 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.90 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	3.60 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.80 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.90 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.90 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	3.60 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.80 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.90 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.90 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	2.70 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.80 %
Roseomonas eburnea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas eburnea	0.90 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.90 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2.70 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.80 %
Roseomonas eburnea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas eburnea	0.90 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.90 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0699464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	702	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_13487284	Not Available	582	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101564923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3625	Open in IMG/M
3300000731\|JGI12381J11899_1008414	Not Available	835	Open in IMG/M
3300000734\|JGI12535J11911_1020332	Not Available	523	Open in IMG/M
3300004479\|Ga0062595_102220148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	538	Open in IMG/M
3300005103\|Ga0066813_1007243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	622	Open in IMG/M
3300005163\|Ga0066823_10100190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	593	Open in IMG/M
3300005168\|Ga0066809_10025512	All Organisms → cellular organisms → Bacteria → Proteobacteria	1223	Open in IMG/M
3300005169\|Ga0066810_10161103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	542	Open in IMG/M
3300005330\|Ga0070690_100819144	Not Available	723	Open in IMG/M
3300005332\|Ga0066388_105598868	Not Available	636	Open in IMG/M
3300005334\|Ga0068869_101747842	Not Available	556	Open in IMG/M
3300005335\|Ga0070666_10581244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	816	Open in IMG/M
3300005343\|Ga0070687_100734056	Not Available	693	Open in IMG/M
3300005347\|Ga0070668_102286419	Not Available	500	Open in IMG/M
3300005406\|Ga0070703_10512208	Not Available	542	Open in IMG/M
3300005406\|Ga0070703_10513123	Not Available	541	Open in IMG/M
3300005436\|Ga0070713_100017630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5405	Open in IMG/M
3300005457\|Ga0070662_101086225	Not Available	686	Open in IMG/M
3300005549\|Ga0070704_101238892	Not Available	681	Open in IMG/M
3300005578\|Ga0068854_101657574	Not Available	584	Open in IMG/M
3300005617\|Ga0068859_102342607	Not Available	589	Open in IMG/M
3300005713\|Ga0066905_102206933	Not Available	513	Open in IMG/M
3300005718\|Ga0068866_10841797	Not Available	641	Open in IMG/M
3300005842\|Ga0068858_101541823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	655	Open in IMG/M
3300005947\|Ga0066794_10146436	Not Available	709	Open in IMG/M
3300006175\|Ga0070712_100217167	All Organisms → cellular organisms → Bacteria	1511	Open in IMG/M
3300006854\|Ga0075425_101702550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	709	Open in IMG/M
3300006871\|Ga0075434_100558826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1164	Open in IMG/M
3300009545\|Ga0105237_11333106	Not Available	724	Open in IMG/M
3300009551\|Ga0105238_10429367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1317	Open in IMG/M
3300010043\|Ga0126380_10850169	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300010154\|Ga0127503_10762199	Not Available	962	Open in IMG/M
3300010366\|Ga0126379_12766888	Not Available	587	Open in IMG/M
3300010371\|Ga0134125_10102029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3194	Open in IMG/M
3300010397\|Ga0134124_10180756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1902	Open in IMG/M
3300010397\|Ga0134124_11690105	Not Available	665	Open in IMG/M
3300010937\|Ga0137776_1622038	Not Available	536	Open in IMG/M
3300012482\|Ga0157318_1031418	Not Available	527	Open in IMG/M
3300012510\|Ga0157316_1002815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1212	Open in IMG/M
3300012931\|Ga0153915_13386262	Not Available	517	Open in IMG/M
3300012948\|Ga0126375_10043977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2329	Open in IMG/M
3300012957\|Ga0164303_11393194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	524	Open in IMG/M
3300012957\|Ga0164303_11440857	Not Available	517	Open in IMG/M
3300012960\|Ga0164301_10750304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	740	Open in IMG/M
3300012960\|Ga0164301_11745971	Not Available	521	Open in IMG/M
3300012961\|Ga0164302_10004292	All Organisms → cellular organisms → Bacteria → Proteobacteria	5004	Open in IMG/M
3300012961\|Ga0164302_10707597	Not Available	747	Open in IMG/M
3300012988\|Ga0164306_10007556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	5443	Open in IMG/M
3300013105\|Ga0157369_10555237	Not Available	1187	Open in IMG/M
3300013307\|Ga0157372_11189734	Not Available	881	Open in IMG/M
3300013307\|Ga0157372_12126054	Not Available	645	Open in IMG/M
3300014745\|Ga0157377_10599187	Not Available	786	Open in IMG/M
3300015373\|Ga0132257_100604202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1356	Open in IMG/M
3300015373\|Ga0132257_102078021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	734	Open in IMG/M
3300015374\|Ga0132255_103334359	Not Available	684	Open in IMG/M
3300016341\|Ga0182035_10277358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1365	Open in IMG/M
3300017927\|Ga0187824_10373551	Not Available	517	Open in IMG/M
3300017955\|Ga0187817_10342270	Not Available	954	Open in IMG/M
3300017966\|Ga0187776_10960611	Not Available	625	Open in IMG/M
3300017974\|Ga0187777_10304604	Not Available	1089	Open in IMG/M
3300017975\|Ga0187782_10158566	Not Available	1685	Open in IMG/M
3300018029\|Ga0187787_10216933	Not Available	683	Open in IMG/M
3300018058\|Ga0187766_10072011	All Organisms → cellular organisms → Bacteria	2061	Open in IMG/M
3300018081\|Ga0184625_10488697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	624	Open in IMG/M
3300018089\|Ga0187774_10198386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas eburnea	1096	Open in IMG/M
3300021404\|Ga0210389_11054981	Not Available	629	Open in IMG/M
3300021478\|Ga0210402_11067335	Not Available	735	Open in IMG/M
3300025898\|Ga0207692_10347149	Not Available	914	Open in IMG/M
3300025901\|Ga0207688_10686747	Not Available	647	Open in IMG/M
3300025903\|Ga0207680_10612365	Not Available	779	Open in IMG/M
3300025904\|Ga0207647_10667500	Not Available	569	Open in IMG/M
3300025913\|Ga0207695_11120251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	667	Open in IMG/M
3300025915\|Ga0207693_10679592	Not Available	798	Open in IMG/M
3300025918\|Ga0207662_10778667	Not Available	673	Open in IMG/M
3300025924\|Ga0207694_11406127	Not Available	589	Open in IMG/M
3300025928\|Ga0207700_10881967	Not Available	801	Open in IMG/M
3300025932\|Ga0207690_11564171	Not Available	551	Open in IMG/M
3300025935\|Ga0207709_10634395	Not Available	849	Open in IMG/M
3300025941\|Ga0207711_10415521	Not Available	1251	Open in IMG/M
3300025944\|Ga0207661_11969279	Not Available	530	Open in IMG/M
3300025945\|Ga0207679_11021014	Not Available	758	Open in IMG/M
3300026023\|Ga0207677_11403678	Not Available	643	Open in IMG/M
3300026833\|Ga0207728_111391	Not Available	829	Open in IMG/M
3300026854\|Ga0207727_105754	Not Available	1272	Open in IMG/M
3300026858\|Ga0207729_108417	Not Available	501	Open in IMG/M
3300026859\|Ga0207859_1002741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1691	Open in IMG/M
3300026868\|Ga0207818_1003177	Not Available	1598	Open in IMG/M
3300026868\|Ga0207818_1019760	Not Available	594	Open in IMG/M
3300026890\|Ga0207781_1031800	Not Available	508	Open in IMG/M
3300027000\|Ga0207803_1003883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2310	Open in IMG/M
3300027035\|Ga0207776_1004575	Not Available	2148	Open in IMG/M
3300027049\|Ga0207806_1033441	Not Available	589	Open in IMG/M
3300027330\|Ga0207777_1049244	Not Available	748	Open in IMG/M
3300027330\|Ga0207777_1049301	Not Available	748	Open in IMG/M
3300027874\|Ga0209465_10599089	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	546	Open in IMG/M
3300031170\|Ga0307498_10002178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3061	Open in IMG/M
3300031184\|Ga0307499_10330472	Not Available	511	Open in IMG/M
3300031199\|Ga0307495_10008474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1436	Open in IMG/M
3300031562\|Ga0310886_10075273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1612	Open in IMG/M
3300031716\|Ga0310813_11114969	Not Available	724	Open in IMG/M
3300031716\|Ga0310813_11830443	Not Available	570	Open in IMG/M
3300032892\|Ga0335081_12503178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	533	Open in IMG/M
3300033809\|Ga0314871_017028	Not Available	580	Open in IMG/M
3300033810\|Ga0314872_032492	Not Available	513	Open in IMG/M
3300034818\|Ga0373950_0080810	Not Available	679	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.17%
Host-Associated	Host-Associated	28.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.77%
Plants	Host-Associated → Plants	28.83%
Aquatic	Environmental → Aquatic	5.41%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.12%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.71%
Freshwater	Environmental → Aquatic → Freshwater	3.60%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.90%
Sediment	Environmental → Aquatic → Sediment	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.73%
Loam	Environmental → Terrestrial → Soil → Loam	27.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.81%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.01%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.01%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.31%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.70%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.90%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.22%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.01%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.41%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.70%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.90%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.90%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.90%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.90%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.90%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.90%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	16.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.21%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.60%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.70%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.70%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.70%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.80%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	1.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.80%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.80%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.90%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.90%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.90%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.90%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.90%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000731	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34	Environmental	Open in IMG/M
3300000733	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80	Environmental	Open in IMG/M
3300000734	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005103	Soil and rhizosphere microbial communities from Laval, Canada - mgLAA	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005947	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300012482	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.130510	Host-Associated	Open in IMG/M
3300012510	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.9.old.080610	Host-Associated	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026833	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 54 (SPAdes)	Environmental	Open in IMG/M
3300026854	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 48 (SPAdes)	Environmental	Open in IMG/M
3300026858	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 69 (SPAdes)	Environmental	Open in IMG/M
3300026859	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 25 (SPAdes)	Environmental	Open in IMG/M
3300026868	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 32 (SPAdes)	Environmental	Open in IMG/M
3300026890	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 51 (SPAdes)	Environmental	Open in IMG/M
3300027000	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 41 (SPAdes)	Environmental	Open in IMG/M
3300027035	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 30 (SPAdes)	Environmental	Open in IMG/M
3300027049	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 72 (SPAdes)	Environmental	Open in IMG/M
3300027330	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033809	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SR_D	Environmental	Open in IMG/M
3300033810	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SR_E	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_06994642	2228664022	Soil	MRELIGKIPTKDSSITEVVYLREMVRCLECQQTVPMGIEIVTVKKIGEARQVISHQYYCRAHGF
ICChiseqgaiiFebDRAFT_134872841	3300000363	Soil	MRELIKKIPTKDPNITEVVYLSEIVRCLECEQTVPVGIEVVTVKKPREPRK
INPhiseqgaiiFebDRAFT_1015649231	3300000364	Soil	MRELIGKIPTKDSSITEVVYLREMVRCLECQQTVPMGIEIVTVKKIGEARQVISHQYYCRAHGF*
JGI12381J11899_10084141	3300000731	Tropical Forest Soil	MRELMGKIPTKDPNITDVVYLSEIVRCLECQKTVPMGIEVVTVKKGGGARKVLRRV
JGI12408J11912_10077733	3300000733	Tropical Forest Soil	VRDLIGKIRTKDPNVTTRVYLSEIVRCCECQKTVPLGIEVVTLKKEGESKKVLEHRWYCRDHGLEYEEKAQSQP
JGI12535J11911_10203321	3300000734	Tropical Forest Soil	MRELMGKIPTKDPNITDVVYLSEIVRCLECQKTVPMGIEVVTVKKGGGARKVLRRVCY
Ga0062595_1022201481	3300004479	Soil	MRELIGKIPTKDPNITEVVYRTEIVRCLACQQTVPMGIEVVTVQKSGEARKVLRHVCYCR
Ga0066813_10072431	3300005103	Soil	MRELIGKIPTKDPNLTEVVYLTEMVRCLECQQTVPMGIEVVTVKKSGKSRKAVRHVCYCRGHGFDYET
Ga0066823_101001901	3300005163	Soil	MRELVGKIPTKDPNITEVVFLSEIVRCLECQRTVPVGIEVVTVARNDDSKKVIRRVCYCRGHGFGYETKAQSLP
Ga0066809_100255122	3300005168	Soil	MRELIGKIPTKDPCITEVVYLSEIVRCLECQQTVPMGIEVVTVKKIGKTRQAI
Ga0066810_101611031	3300005169	Soil	MRELIGKIPTKDPNIIEVVYLTEMVRCLECQQTVPIGIEVVTVQRSGE
Ga0070690_1008191441	3300005330	Switchgrass Rhizosphere	MRELIGKIPTKDPNITEVVYLAEIVLCLECQQTVPMGIEVVTVKKSGKSKKAVRHV
Ga0066388_1055988682	3300005332	Tropical Forest Soil	MRELIGKIPTKDPAITEVVYLSEVVRCIECQQTVPMGIEVVTVKKIAGARQVVRHQCYCRGHGFDYETKAQS
Ga0068869_1017478421	3300005334	Miscanthus Rhizosphere	MRELIGKIPTKDPNITEVVYLSEVVRCLECEQTVPMGIEVVTV
Ga0070666_105812441	3300005335	Switchgrass Rhizosphere	RELIGKIPTKDPNITEVVYLSEIVRCLECEQTVPMGIEVVTVKLLLLPGTRL*
Ga0070687_1007340561	3300005343	Switchgrass Rhizosphere	MRELVGKIPTKDPNITEVVYLSEIVRCLECHQTVPVGIEVVTVKRSGEAKKVIRRVCY
Ga0070668_1022864191	3300005347	Switchgrass Rhizosphere	MRELIGKIPTKDPNITEVVYLAEIVLCLECQQTVPMGIEVVTVKKSGKSKKAVRHVCY
Ga0070703_105122081	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MRELIGKIPTKDPNITEVVYLSEIVRCLECEQTVPMGIEVVTVKKTAGARQVVRHQC
Ga0070703_105131231	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MRELIGKIPTRDPNITEVVYLAEIVLCLECQQTVPVGIEVVTVKKSGKSKQVVRH
Ga0070713_1000176308	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRELIGKIPTKDPNITEVVYLSEVVRCLECEQTVPMGIEVVTVKKTAGARQVVRHQC
Ga0070662_1010862251	3300005457	Corn Rhizosphere	MRELVGKIPTKDPNITEVVYLSEIVRCLECHQTVPVGIEVVTVKRSGEAKKVIRRVCYCRGHGFDYETRAQSLPI
Ga0070704_1012388921	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MRELIGKIPTKDPNITEVVYLAEIVLCLECQQTVPMGIEVVTVKKSGKSKKAVRHVCYCRGHGFEYETKAQS
Ga0068854_1016575742	3300005578	Corn Rhizosphere	MRELIGKIPTKDPNITEVVYLAEIVLCLECQQTVPMGIEVVTVKKSGKSKKAVRHVCYCR
Ga0068859_1023426072	3300005617	Switchgrass Rhizosphere	MRELIGKIPTRDPNITEVVYLAEIVLCLECQQTVPVGIEVVTVKKSGNSKQVVRHVCYCRGHGFDYETKA
Ga0066905_1022069332	3300005713	Tropical Forest Soil	MRELIGKIPSKDPNVTDEVYLCETVRCQLCGRTVPIGIEVITAKKD
Ga0068866_108417972	3300005718	Miscanthus Rhizosphere	MRELIGKIPTRDPNITEVVYLAEIVLCLECQQTVPVGIEVVTVKKSGKSKQVVRHVCYCRGHGF
Ga0068858_1015418231	3300005842	Switchgrass Rhizosphere	MRELIGKIPTKDPNITEVVYLSEIVRCLECEQTVPMGIEVVTVKLLLLPGTRL*
Ga0066794_101464362	3300005947	Soil	MRELMGKIPTKDPNVTEVVYLSELVRCRECQRTVP
Ga0070712_1002171671	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRELIGKIPTKDPNITEVVYLAEIVLCLECQQTVPMG
Ga0075425_1017025502	3300006854	Populus Rhizosphere	MRELIGKIPTKDPNVTEVVYLAEMVRCLDCEQTVPVGIEVVTVKKTEN
Ga0075434_1005588263	3300006871	Populus Rhizosphere	MRELIGKIPTKNSSITEVVYLSEMVRCLECQQTMLMGIEIVTVKKIGGTW*
Ga0105237_113331061	3300009545	Corn Rhizosphere	MRELVGKIPTKDPNITEVVYLSEIVRCLECHQTVPVGIEVVTVKRSGEAKKVIRRV
Ga0105238_104293673	3300009551	Corn Rhizosphere	MRELIGKIPTKDPNITEVVYLSEVVRCLECEQTVPMG
Ga0126380_108501692	3300010043	Tropical Forest Soil	MRELIGKIRTKDPGVTEEVYFSELIRCQECEKTVPIGIEVITV
Ga0127503_107621991	3300010154	Soil	MRELIGKIPTRDPNITEVVYLAEIVLCLECQQTVPMGIEVVTVKKSGKSKQVVRQVCYCRGHGFDYETKAQSLPI
Ga0126379_127668881	3300010366	Tropical Forest Soil	MRELIGKIPTKDSTITEVVYLSEMVRCLECQQTVPMGIEIVTVKKLGAARHVVRHKCYCRGHGFDYETK
Ga0134125_101020291	3300010371	Terrestrial Soil	MRELIGKIPTRDPNITEVVYLAEIVLCLECQQTVPVGIEVVTVKKSGKSKQVVRHVCYCRGHGFDYETKAQSL
Ga0134124_101807561	3300010397	Terrestrial Soil	MRELIKKIPTKDPNITEVVYLSEIVRCLECEQTVPVGIEVVTVKKTAGAR
Ga0134124_116901051	3300010397	Terrestrial Soil	MRELIGKIPTKDPSITEVVYLSEIVRCLECEQTVPVGIEVVTVKKTAGAR
Ga0137776_16220381	3300010937	Sediment	MRELIGKISTKDPNITEVVYLAEIVRCLECQQTVPM
Ga0157318_10314181	3300012482	Arabidopsis Rhizosphere	MRELIGKIPDKDPNITEVVYLSEIVRCLECEQTVPMGIEVVTVKKTAGARQVVRHQCYCRGHGF
Ga0157316_10028152	3300012510	Arabidopsis Rhizosphere	MRELIGKIPTKDPNITEVVYLSEIVRCLECEQTVPMGIEVVTVK
Ga0153915_133862621	3300012931	Freshwater Wetlands	MGKIPTKDPNITDVVYLSEIVRCLECQKTVPMGIEVVTVKKGGGARKVLRRVCYCR
Ga0126375_100439774	3300012948	Tropical Forest Soil	MRELIGKIPTKDPNVTEVVYLAEMVRCLECEQTVPVGIEVV
Ga0164303_113931942	3300012957	Soil	MRELIGKIPTKDPAITEVVYLADMVRCLECEQTRPVGIEVVTVKKNGGARKVLRHVCYCR
Ga0164303_114408571	3300012957	Soil	MRELIGKIPTKDPNITEVVYLAEIVLCLECQQTVPVGIE
Ga0164301_107503041	3300012960	Soil	MRELIGKIPTKDPAITEVVYLADMVRCLECEQTRPVGIEVVTVKKNGGARKVLR
Ga0164301_117459712	3300012960	Soil	MRELIGKIPTKNSSITEVVYLSEMVRCLECQQTMLMGIEIVTVKKIGG
Ga0164302_100042924	3300012961	Soil	MRELIGKIPTKDPNITEMVYRTEMVRCLECQRTAPMGI*
Ga0164302_107075971	3300012961	Soil	MRELIGKIPTKDPNITEVVYRSEIVRCLECEQKVPVGIEVVAVKKTAGARQV
Ga0164306_100075561	3300012988	Soil	MRELIGKIPTRDPNITEVVYLAEIVLCLECQQTVPVGIEVVTVKKSGK
Ga0157369_105552372	3300013105	Corn Rhizosphere	MRELIKKIPTKDPNITEVVYLSEIVRCLECEQTVPMGIEVVTVKLLLLPGTRL*
Ga0157372_111897343	3300013307	Corn Rhizosphere	MRELIGKIPTKDPNITEVVYLSEGVRCLECEQTVPMGIEVVTVKLLLLPGTRL*
Ga0157372_121260541	3300013307	Corn Rhizosphere	MRELIGKIPTKDPNITEVVYLAEIVLCLECQQTVPMGIEVVTVKKSGKSKQVVRQVCYCRGH
Ga0157377_105991871	3300014745	Miscanthus Rhizosphere	MRELIGKIPTKDPNITEVVYLSEVVRCLECEQTVPMGIEVVTVKKTAGARQVVRHQ
Ga0132257_1006042022	3300015373	Arabidopsis Rhizosphere	MRELVGKISTKDPNITEVVYLSEIVRCLECHQTVPVGIEVVTVK
Ga0132257_1020780212	3300015373	Arabidopsis Rhizosphere	MRELVGKIPTKDPNITEAVYLSEIVRCLECGRTVPVGIEVVTVQGSGETKKATRHVCYCRAHGFDYEARA*
Ga0132255_1033343591	3300015374	Arabidopsis Rhizosphere	MRELIGKIPTKDPNITEVVYLTEIVRCLECEQTVPMGIEVVTV
Ga0182041_104728332	3300016294	Soil	VRDLIGKIRTKDPNVTTRVYLSEIVRCCECQKTVPLGIEVVTLKKEEESNKVLEHRWYCRDHGLE
Ga0182035_102773583	3300016341	Soil	VRDLIGKIRTKDPNVTTRVYLSEIVRCCECQKTVPLGIEVVTL
Ga0187824_103735512	3300017927	Freshwater Sediment	MRELIGKIPTKDPNVTEAVYLSEIVRCRECQRTVPIGIEVVRFKKDGEFKKVLRHEYYCR
Ga0187817_103422701	3300017955	Freshwater Sediment	MRELIGKIPTKDPNVIEEVYLSELIRCRECHQTAPMGIEVITVKR
Ga0187776_109606112	3300017966	Tropical Peatland	MRELVGKITTKDPNVTEVIYLAEVVHCLECQKTAPVGIEVLTIKKSGESRKTIRHVCYCRAH
Ga0187777_103046044	3300017974	Tropical Peatland	MREQIGKIPTKDPNVIEGVYLSELIRCRECHQTAPMGI
Ga0187782_101585661	3300017975	Tropical Peatland	MRELIGKIPTKDPNVIEEVYLSELVRCRECHRTAPMGIEV
Ga0187787_102169331	3300018029	Tropical Peatland	MRELVGKIPTKDPNIVEVVYRAEIVRCLECQKTVPMGIEVVTVQKSGESKKVLRHVCY
Ga0187766_100720113	3300018058	Tropical Peatland	MRELVGKIPTKDPDITEVVYLSEIVRCLECQRTVPVGIEVVTVK
Ga0184625_104886972	3300018081	Groundwater Sediment	MRELIGRIPTKDPGVTEDVYLSELVRCRECERTVPVGIEVVTVRKDRKS
Ga0187774_101983861	3300018089	Tropical Peatland	MRELIGKIPTKDPSITEVVYLSELVRCLECQKTSPMG
Ga0210389_110549811	3300021404	Soil	MRELIGKIPTKDPNVTEVVYLAEIVLCLECQQTVPVGIEVVTVKKSGKSRKAVRHVCYCR
Ga0210402_110673351	3300021478	Soil	MRELIGKIPTKDPNVTEVVYLAEIVLCLECQQTVPMGIEVVTVKKSGKSKQVVRQVCYCRGHGFDYETKAQS
Ga0207692_103471492	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MRELIGKIPTRDPNITEVVYLAEIVLCLECQQTVPMG
Ga0207688_106867471	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MRELIGKIPTKDPNITEVVYLSEIVRCLECEQTVPMGIEVVTVKLLLLPGTRL
Ga0207680_106123651	3300025903	Switchgrass Rhizosphere	MRELIGKIPTKDPNITEVVYLSEVVRCLECEQTVPMGIEVVTVKKTAGARQVVRHQCYCRGHGF
Ga0207647_106675001	3300025904	Corn Rhizosphere	MRELVGKIPTKDPNITEVVYLSEIVRCLECHQTVPVGIEVVTVKRSGEAKKVIRRVCYCRGHGFDYETKAQSL
Ga0207695_111202511	3300025913	Corn Rhizosphere	MRELIGKIPTKDPNITEVVYLAEIVLCLECQQTVPMGIEVVTVKKSGKSKKAVRHVCYCRGHGF
Ga0207693_106795921	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MRELIGKIPTRDPNITEVVYLAEIVLCLECQQTVPMGIEVVTVKKSGKSK
Ga0207662_107786671	3300025918	Switchgrass Rhizosphere	MRELVGKIPTKDPNITEVVYLSEIVRCLECHQTVPVGIEVVTVKRSGEAKKVIRRVCYCRGHGFDY
Ga0207694_114061272	3300025924	Corn Rhizosphere	MRELIGKIPTKDPNITEVVYLSEIVRCLECEQTVPMGIEVVTVKLLLLP
Ga0207700_108819671	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MRELIGKIPTRDPNITEVVYLAEIVLCLECQQTVPMGIEVVTVKKSGK
Ga0207690_115641711	3300025932	Corn Rhizosphere	MRELIGKIPTRDPNITEVVYLAEIVLCLECQQTVPVGIEVVTVKKSG
Ga0207709_106343952	3300025935	Miscanthus Rhizosphere	MRELVGKIPTKDPNITEVVYLSEIVRCLECHQTVPVGIEVV
Ga0207711_104155213	3300025941	Switchgrass Rhizosphere	MRELIGKIPTRDPNITEVVYLAEIVLCLECQQTVPVGIEVVT
Ga0207661_119692791	3300025944	Corn Rhizosphere	MRELIGKIPTKDPSITEVVYLSEIVRCLECEQTVPMGIEVVTVKKTAGARQVIRHQ
Ga0207679_110210142	3300025945	Corn Rhizosphere	MRELIGKIPTKDPNITEVVYLSEVVRCLECEQTVPMGIEVVTVKKTAGARQVIRHQCYCRGHGFD
Ga0207677_114036781	3300026023	Miscanthus Rhizosphere	MRELIGKIPTKDPNITEVVYLSEVVRCLECEQTVPMGIEVVTVKKTAGARQVVRHQCYCRGHGFDY
Ga0207728_1113911	3300026833	Tropical Forest Soil	MRELMGKIPTKDPNITDVVYLSEIVRCLECQKTVPMGIEVVTVKKG
Ga0207727_1057543	3300026854	Tropical Forest Soil	MRELMGKIPTKDPNITDVVYLSEIVRCLECQKTVPMGIEVVTVKKGGGARKVLRR
Ga0207729_1084171	3300026858	Tropical Forest Soil	MRELMGKIPTKDPNITDVVYLSEIVRCLECQKTVPMGIEVVTVKKGG
Ga0207859_10027415	3300026859	Tropical Forest Soil	VRDLIGKIRTKDPNVTTRVYLSEIVRCCECQKTVPLGIEVV
Ga0207818_10031771	3300026868	Tropical Forest Soil	MRELMGKIPTKDPNITDVVYLSEIVRCLECQKTVPMGIEVVTVKKGGGARKVLRRVCYCRAHGFDYE
Ga0207818_10197601	3300026868	Tropical Forest Soil	VRDLIGKIRTKDPNVTTRVYLSEIVRCCECQKTVPLGIEVVTLKKEGE
Ga0207781_10318001	3300026890	Tropical Forest Soil	MRELMGKIPTKDPNITDVVYLSEIVRCLECQKTVPMGIEVVTVKKGGG
Ga0207803_10038831	3300027000	Tropical Forest Soil	VRDLIGKIRTKDPNVTTRVYLSEIVRCCECQKTVPLGIE
Ga0207776_10045755	3300027035	Tropical Forest Soil	MRELMGKIPTKDPNITDVVYLSEIVRCLECQKTVPMGIEVVTVKKGGGARKVLRRVCYCRAHGFD
Ga0207806_10334411	3300027049	Tropical Forest Soil	MRELMGKIPTKDPNITDVVYLSEIVRCLECQKTVPMGIEVVTVKKGGGARKVL
Ga0207777_10492441	3300027330	Tropical Forest Soil	VRDLIGKIRAKDPNVTTRVYLSEIVRCCECQKTVPLGIEVVTLKKEGESKKVLE
Ga0207777_10493012	3300027330	Tropical Forest Soil	VRDLIGKIRTKDPNVTTRVYLSEIVRCCECQKTVPLGIEVVTLKKEGESKKVLE
Ga0209465_105990892	3300027874	Tropical Forest Soil	MRELIGKIRTKDPGVTEEVYFSELIRCQECEKTVPIGIEVITVKR
Ga0307498_100021781	3300031170	Soil	VSHARTDWKVPTKDPNITEVVYLSEIVRCLECEQTVPMGIEVVTVKLSGTS
Ga0307499_103304721	3300031184	Soil	MRELIGKIPTKDPNITEVVYLSEVVRCLECEQTVPMGIEVVTVK
Ga0307495_100084741	3300031199	Soil	MRELIGKIPTRDPNITEVVYLAEIVLCLECQQTVPMGIEVV
Ga0310886_100752732	3300031562	Soil	MRELIGKIPTKDPNITEVVYLSEVVRCLECEQTVPMGIEVV
Ga0318572_107139561	3300031681	Soil	VRDLIGKIRTKDPNVTTRVYLSEIVRCCECQKTVPLGIEVVTLTKEGESKKVLEHRFYCRDHGLE
Ga0310813_111149692	3300031716	Soil	MRELIGKIPTKDPSITEVVYLSEIVRCLECEQTVPMGIEVVTV
Ga0310813_118304431	3300031716	Soil	MRELIGKIPTKDPNITEMVYRTEMVRCLECQRTAPMGIEVVTVKKSEESKEVVRHVCYCRGHGFDYE
Ga0310911_103567023	3300032035	Soil	VRDLIGKIRTKDPNVTTRVYLSEIVRCCECQKTVPLGIEVVTLKKEGESKKVLEHRWYCRDHGLEYEE
Ga0335081_125031781	3300032892	Soil	MRELIGKIPTKDPNITEVIYLTEIVRCLECQQTVPMGIEVVTVKKSGESKKVVRHVCYCRGHGFDYETKAQSLPI
Ga0314871_017028_468_578	3300033809	Peatland	MRELVGKIPTKDPNIVEVVYRAEIVRCLECQKTVPMG
Ga0314872_032492_1_114	3300033810	Peatland	MRELVGKIPTKDPNIVEVVYRAEIVRCLECQKTVPMGI
Ga0373950_0080810_518_679	3300034818	Rhizosphere Soil	MRELIGKIPTKDPNITEVVYLSEVVRCLECEQTVPMGIEVVTVKKTAGARQVVR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086002

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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