NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F085908

Metagenome / Metatranscriptome Family F085908

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F085908
Family Type Metagenome / Metatranscriptome
Number of Sequences 111
Average Sequence Length 85 residues
Representative Sequence VNVPLSIVNGGEAAIVENQGDHVVVRSSVASPPGSTLSMKHGELSVLVKVRGCKRLPESQLPFRIEGRLVSFTRAAREALFGQ
Number of Associated Samples 81
Number of Associated Scaffolds 111

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 85.45 %
% of genes near scaffold ends (potentially truncated) 23.42 %
% of genes from short scaffolds (< 2000 bps) 78.38 %
Associated GOLD sequencing projects 77
AlphaFold2 3D model prediction Yes
3D model pTM-score0.80

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (54.054 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter
(20.721 % of family members)
Environment Ontology (ENVO) Unclassified
(23.423 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(57.658 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.
1rootL2_102652351
2rootH1_102119361
3Ga0070677_102505541
4Ga0070682_1000060263
5Ga0070682_1002229502
6Ga0068868_1011174601
7Ga0070693_1003358162
8Ga0070693_1007882941
9Ga0070665_1004790122
10Ga0068863_1003941762
11Ga0066790_101495232
12Ga0075367_106089132
13Ga0075369_106111742
14Ga0134124_100010579
15Ga0134121_124494422
16Ga0126356_112223941
17Ga0150984_1066974772
18Ga0150984_1224632622
19Ga0150984_1234576662
20Ga0157305_100192652
21Ga0157305_100252001
22Ga0157309_101846451
23Ga0157292_101787082
24Ga0157291_100493612
25Ga0157290_103130731
26Ga0157290_104661202
27Ga0157298_102122022
28Ga0157310_100097342
29Ga0137404_103675482
30Ga0137407_105181551
31Ga0164241_100003965
32Ga0164241_100144404
33Ga0164309_1000002140
34Ga0164309_1000037617
35Ga0164308_1000021617
36Ga0164308_103672222
37Ga0164306_100014669
38Ga0164306_101250323
39Ga0164306_113409872
40Ga0163162_124581672
41Ga0163163_127910542
42Ga0157376_106054922
43Ga0157376_111848382
44Ga0157376_125072912
45Ga0193728_11552201
46Ga0179592_102084432
47Ga0210396_117277022
48Ga0193699_104688042
49Ga0210387_108472672
50Ga0210392_102537442
51Ga0210392_102716742
52Ga0247782_10221711
53Ga0247761_10000899
54Ga0247778_1000032144
55Ga0247778_10493061
56Ga0247764_11948532
57Ga0247769_10727892
58Ga0247766_10004767
59Ga0247779_10632732
60Ga0247779_11156872
61Ga0247783_10099391
62Ga0247783_10124092
63Ga0247783_10264552
64Ga0247777_11767941
65Ga0247755_10409092
66Ga0247740_10022347
67Ga0247740_11104251
68Ga0247757_1000009344
69Ga0247772_100005930
70Ga0247765_10599921
71Ga0247773_10910432
72Ga0247773_10968692
73Ga0247760_100020337
74Ga0247776_100443031
75Ga0207682_103033211
76Ga0207703_114752681
77Ga0207641_103771792
78Ga0207676_107905183
79Ga0207698_125897751
80Ga0268266_107881362
81Ga0302166_100277302
82Ga0302259_10897472
83Ga0302254_100890421
84Ga0302298_102724312
85Ga0311332_100480822
86Ga0311332_111332102
87Ga0311334_100381112
88Ga0311336_112614322
89Ga0302175_101548041
90Ga0311348_103596391
91Ga0311348_103678992
92Ga0311333_101463101
93Ga0311333_103505002
94Ga0311333_116102162
95Ga0311366_105182752
96Ga0170824_1052186441
97Ga0302323_1021400732
98Ga0302323_1032950242
99Ga0302323_1033026551
100Ga0307513_100587954
101Ga0307513_102071153
102Ga0307513_104334242
103Ga0170818_1093830331
104Ga0311364_102812371
105Ga0265313_104244292
106Ga0307508_100768134
107Ga0302321_1006815711
108Ga0302321_1025974891
109Ga0302321_1028140892
110Ga0308175_1005234132
111Ga0315910_115214952
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 7.21%    β-sheet: 40.54%    Coil/Unstructured: 52.25%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

1020304050607080VNVPLSIVNGGEAAIVENQGDHVVVRSSVASPPGSTLSMKHGELSVLVKVRGCKRLPESQLPFRIEGRLVSFTRAAREALFGQSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.80
Powered by PDBe Molstar

Structural matches with SCOPe domains



 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
45.9%54.1%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Soil
Vadose Zone Soil
Terrestrial Soil
Soil
Forest Soil
Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Fen
Plant Litter
Corn Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Populus Endosphere
Switchgrass Rhizosphere
Ectomycorrhiza
Sugarcane Root And Bulk Soil
Miscanthus Rhizosphere
Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Avena Fatua Rhizosphere
Boreal Forest Soil
18.9%3.6%19.8%20.7%3.6%3.6%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
rootL2_1026523513300003322Sugarcane Root And Bulk SoilMNVSLTISNGGQAAIVENQGDYVVVRSSVASPPGSTLHMKHGELSVQVKVRGCKRLAEDQLPFRIEGRLVSFTRAARDLLFGKPTATSEE*
rootH1_1021193613300003323Sugarcane Root And Bulk SoilMNVSLTISNGGQAAIVENQGDYVVVRSSVASPPGSTLHMKHGELSVQVKVRGCKRLAEDQLPFRIEGRLVSFTRAARDLLFGTPTATSEE*
Ga0070677_1025055413300005333Miscanthus RhizosphereSLVDGGEAAIVENQGDYVVVRSSIASPPGSTLRMKHGELPVLVKVRGCKRLAESQLPFRIEGRLVSFTRSARDALFGQT*
Ga0070682_10000602633300005337Corn RhizosphereMNVPLSIVNGGEAAIVENQGDYVVVRSSVASPPGSTLSMQHGQLPVLVKVRGCRRLSEEPLPFRIEGRLVSFTRAARETLFGQAPAD*
Ga0070682_10022295023300005337Corn RhizosphereMNVPLSLASGGEAAIVENQGDYVVVRSSVASPPGSTLSMKHGELPVLVKVRGCKRLAESQLPFRIEGRLVSLTRAARDALFGQTPAD*
Ga0068868_10111746013300005338Miscanthus RhizosphereMNVPLSIVNGGEAAIVENQGDHVVLRSSVASPPGSTLSLKHGELSLQVKVRGCKRLAESELPFRIEGRLVSLTRAARDALFGLPSSD*
Ga0070693_10033581623300005547Corn, Switchgrass And Miscanthus RhizosphereMNVPLSIVNGGQAAIVENQGDHVVVRSSVASPPGSTLSMKHGELAVLVKVRGCKRLAESQLPFRIEGRLVSFTRTARDALFGREPGE*
Ga0070693_10078829413300005547Corn, Switchgrass And Miscanthus RhizosphereTRGHATRAEGMNVALTIVRGGDAAIVENAGDYVVVRSSVASPPGSTLSMKHGELAVQVKVRGCKRLAESQLPFRIEGRLVSFTRAAREALFGIASGD*
Ga0070665_10047901223300005548Switchgrass RhizosphereMNVPLSIVPGGEAAIVENQGDHVVVRSSIASPPGSTLSMKHGELSVLVKVRGCKRLAESQLPFRIEGRLISLTRVARETLFGQ*
Ga0068863_10039417623300005841Switchgrass RhizosphereMNVPLSIVNGGEAAIVENQGDHVVVRSSVASPPGSTLSMKHGELSVQVKVRGCKRTTEDRLPFRIEGRLVSFTRAAREALFGSDSSE*
Ga0066790_1014952323300005995SoilMSEELNVALTLANGGAASIVENDGDHVTVRSSMASPPGSTLALEQRELTVQVKVRGCKRIDDSALPFRIEGRLVSLTRAGREQLFGAKPDAD*
Ga0075367_1060891323300006178Populus EndosphereMSETLNVPLTLANGGAAAIVENQGDHVTLRSSAPSPPGSTLALFQRELAVQVKVRGCKRVAEDELPFRIEGRLVSLTRAGREQLFGGKSPA*
Ga0075369_1061117423300006186Populus EndosphereMSETLNVPLTLANGGAAAIVENQGDHVTLRSSAPSPPGSTLALFQRELAVQVKVRGCKRVAEDELPFRIEGRLVSLTRAGRQQLFGG
Ga0134124_1000105793300010397Terrestrial SoilMNVPVSIVNGGEAAIVENQGDHVVVRSSVASPPGSTLSMKHGELSVQVKVRGCKRTTEDRLPFRIEGRLVSFTRAAREALFGSDSSE*
Ga0134121_1244944223300010401Terrestrial SoilMNVALSIVSGGEAAIVENQGDHVVVRSSVASPPGSTLSMKHGELSVLVKVRGCKRSTESQLPFRIEGRLVSLTRSAREALFGHSSD
Ga0126356_1122239413300010877Boreal Forest SoilVNVPLTVASGGEAAIIENQGDHVTLRSSVPSPPGSTLALLHEGLTIQVKVRGCKRLTEAEEAMPFRIEGRFVSLTRTAREKLFAP*
Ga0150984_10669747723300012469Avena Fatua RhizosphereMNVPLSIAAGGEAAIVENQGDHVVVRSSVASPPGSTLSMRSGELVVLVKVRGCKRLAESQLPFRIEGRLVSFTRAARDALFGQEPG*
Ga0150984_12246326223300012469Avena Fatua RhizosphereMNVPLSIVSGGDAAIVENQGDHVTLRSSVASPPGSTLSMKHGEFSVLVKVRGCKRLDEPALPFRIEGRLVSFTRAAREALFGTS*
Ga0150984_12345766623300012469Avena Fatua RhizosphereMNVKLALAAGGDAAIVENDGDHVTVRSSVASPPGSTLALVHEGLNVQVKVRGCKRLAEPDLPFRIEGRLVSLTRAGREQLFGKADT*
Ga0157305_1001926523300012891SoilVNVPLSIVNGGEAAIVENQGDHVVVRSSVASPPGSTLSMKHGELSVLVKVRGCKRLPESQLPFRIEGRLVSFTRAAREALFGQ*
Ga0157305_1002520013300012891SoilMNVPLSLVNGGQAAIVENQGDHVVVRCSVASPPGSTLSMRYGELSLQMKVRGCKRLEESPLPFRIEGRLVSFTRAAREALFGRPASD*
Ga0157309_1018464513300012895SoilIVENQGDHVVVRSSVASPPGSTLSMKHGELSVLVKVRGCKRLPESQLPFRIEGRLVSFTRAAREALFGQ*
Ga0157292_1017870823300012900SoilMNVPLSLVDGGEAAIVENQGDYVVVRSSIASPPGSTLRMKHGELPVLVKVRGCKRLAESQLPFRIEGRLVSFTRSARDALFGQT*
Ga0157291_1004936123300012902SoilMNVPLSIVNGGEAAIVENQGDHVVVRSSVASPPGSTLSLKHGELALQVKVRGCKRLTESQLPFRIEGRLVSLTRAARDALFGLPSSD*
Ga0157290_1031307313300012909SoilGALCHAARSQGMNVQLELSAGGAAAIIEIQGDHVVLLCSVASPPGSTLNLKHGQTPVLVKVRGCKRLETSELPFRIEGRLVSFTRAARELLFKEG*
Ga0157290_1046612023300012909SoilMNVPLSIANGERAALVEVSGDHVVVRSSIASPPGSTLSMKHGEHAVLVKVRGCKRLEGEDLPFRIEGRFVSLTRAARDAMLAP*
Ga0157298_1021220223300012913SoilMNVPLSIVPGGEAAIVENQGDHVVVRSSIASPPGSTLSMKHGELSVLVKVRGCKRLAESQLPFRIEGRLVSFTRGARDALFGQT*
Ga0157310_1000973423300012916SoilMNVPLTIVSGGEAAIVENQGDFVVVRSSVASPPGSTLSMKSGELAVAVKVRGCKRLQESSLPFRIEGRLVSFTRAARETLFGQSPAD*
Ga0137404_1036754823300012929Vadose Zone SoilVNVPLTVASGGEAAIIENQGDHVTLRASVPSPPGSTLALLHEGLAIQVKVRGCKRLTEAEEALPFRIEGRFVSLTRAAREKLFGP*
Ga0137407_1051815513300012930Vadose Zone SoilVNVPLTVASGGEAAIIENQGDHVTLRASVPSPPGSTLALLHEGLAIQVKVRGCKRLTEAEEAMPFRIEGRFVSLTRVAREKLFAP*
Ga0164241_1000039653300012943SoilMNVPLRIVNGGEAAIVENQGDHVVVRSSVASPPGSTLSMTFGALPVQVKVRGCKRLGETELPFRIEGRLVSFTRAAREAMFGSEGPSEA*
Ga0164241_1001444043300012943SoilMNVPLSIVNGGEAAIVENQGDHVVVRSSVASPPGSTLSMRHGELSVQVKVRGCKRLAEAELPFRIEGRLVSFTRAARETLFGNDISS*
Ga0164309_10000021403300012984SoilMNVPLSIESGGDAAIVEVQGDHVVVRSSVASPPGSTLSMKHGDFPVQVKVRGCKRLAEQQLPFRIEGRLVSFTRAAREALFGQGAT*
Ga0164309_10000376173300012984SoilMNVPLRIVNGGEAAIVENQGDHVVVRSSVASPPGSTLSMTFGALPVQVKVRGCKRLAEGELPFRIEGRLVSFTRAARDAMFGPSEA*
Ga0164308_10000216173300012985SoilMNVALTIVRGGDAAIVENAGDYVVVRSSVASPPGSTLSLKHGELAVQVKVRGCKRLAESQLPFRIEGRLVSFTRAAREALFGIASGD*
Ga0164308_1036722223300012985SoilMNVSLTIVSGGEAAIVENQGDHVVVRSSVASPPGSTLSMKHGELAVQVKVRGCKRLAESQLPFRIEGRLVSFTRAAREAMFGDAASD*
Ga0164306_1000146693300012988SoilMNVPLIIENGGDAAIVEVQGDHVVVRASVASPPGSTLSMKHGDLPVQVKVRGCKRLAEPQLPFRIEGRLVSFTRAAREALFGQGAI*
Ga0164306_1012503233300012988SoilAAIVENQGDHVVLRSSVASPPGSTLSLKHGELSLQVKVRGCKRLAESELPFRIEGRLVSLTRAARDALFGLPSSD*
Ga0164306_1134098723300012988SoilMNVPLTIESGGAAAIVEIQGDHVVVRSSVASPPGSTLSMKHGDLPVQVKVRGCKRLGEEQLPFRIEGRLVSFTRAAREALFGQGST*
Ga0163162_1245816723300013306Switchgrass RhizosphereMNVPLSIVAGGEAAIVENQGDYVVVRSSVASPPGSTLCMKHGELPVLVKVRGCKRLPESQLPFRIEGRLVSFTRVARDALFGPSATG*
Ga0163163_1279105423300014325Switchgrass RhizosphereMNVPLSIVNGGEAAIVENQGDHVVVRSSVASPPGSTLSMKYGELSVQVKVRGCKRLTEDQLPFRIEGRLVSFT
Ga0157376_1060549223300014969Miscanthus RhizosphereMNVPLSIANGGEAAIVENQGDYVVVRSSVASPPGSTLSMKHGELAVLVKVRGCKRLAESQLPFRIEGRLVSLTRAARETLFGEAPAD*
Ga0157376_1118483823300014969Miscanthus RhizosphereMNVPLSIVNGGQAAIVENQGDYVVVRSSVASPPGSTLSMKHGELPVLVKVRGCKRLAEGQLPFRIEGRLVSFTRVARDALFGQAREGGSDPAKD*
Ga0157376_1250729123300014969Miscanthus RhizosphereMNVPLSIAKGGEAAIVENQGDHVVVRSSIASPPGSTLSMKYGELSVQVKVRGCKRLTEDQLPFRIEGRLVSFTRSAREALFGSDST*
Ga0193728_115522013300019890SoilVNVPLTIASGGDAAIIENQGDHVTLRSSVPSPPGSTLALLHEGLGIQVKVRGCKRLIEAEEALPFRIEGRFVSLTRTTREKLFGP
Ga0179592_1020844323300020199Vadose Zone SoilVNVPLTVASGGEAAIIENQGDHVTLRASVPSPPGSTLALLHEGLAIQVKVRGCKRLTEAEEALPFRIEGRFVSLTRAAREKLFGP
Ga0210396_1172770223300021180SoilMSEAVHVPLTLANGGPAAIVENQGDHVVVRSSVPSPPGSTLALSQQGLSVQVKVRGCKRVAEGDLPFRIEGRLVSLARTAREQLFGVKPNGA
Ga0193699_1046880423300021363SoilVNVELSLAGGARAAIVENHGDHVTLRSSVASPPGSTLVLDHRGLAVQVKVRGCKRLDGELPFRIEGRLVSLTRAARE
Ga0210387_1084726723300021405SoilMSEGLNVVLTLANGGAASIVENDADHVTVRSSMASPPGSTLVLRQRELTVQVKVRGCKRMDDSALPFRIEGRLVSLTRAGREQLFGAKPDAG
Ga0210392_1025374423300021475SoilMSEGLNVALTLANGGAAAIVENQGDHVTVRSSIASPPGSTLTMNQQGLTVLVKVRGCKRLDDSALPFRIEGRLVSLTRAGREQLFGAKSEAT
Ga0210392_1027167423300021475SoilMSEGLNVVLTLANGGAASIVENDADHVTVRSSMASPPGSTLVLRQRELTVQVKVRGCKRMDDGALPFRIEGRLVSLTRAGREQLFGAKPDAG
Ga0247782_102217113300022870Plant LitterMNVPLSIVNGGEAAIVENQGDHVVLRSSVASPPGSTLSLKHGELSLQVKVRGCKRLAESELPFRIEGRLVSLTRAARDALFGLPSSD
Ga0247761_100008993300022878Plant LitterMNVPLTISNGGEAAIVENQGDHVVVRSSVASPPGSTLSMKHGELAVLVKVRGCKRLAESQLPFRIEGRLVSFTRAARDALFGPTSAD
Ga0247778_10000321443300022894Plant LitterMNVPLTIDSGGEAAIVENQGDHVVLRSSIASPPGSTLTMKHGDLPVLVKVRGCKRLSESQLPFRIEGRLVSVTRSARDTLFGHASSD
Ga0247778_104930613300022894Plant LitterMNVPLSLVNGGQAAIVENQGDHVVVRCSVASPPGSTLSMRYGELSLQMKVRGCKRLEESPLPFRIEGRLVSFTRAAREALFGRPASD
Ga0247764_119485323300022897Plant LitterMNVLLSIAAGGEAAIVENQGDHVVVRSSVASPPGSTLSLKHGELPVLVKVRGCKRLPESQLPFRIEGRLVSFTRAAREALFGQTAAD
Ga0247769_107278923300022904Plant LitterVNVPLSIVNGGEAAIVENQGDHVVVRSSVASPPGSTLSMKHGELSVLVKVRGCKRLPESQLPFRIEGRLVSFTRAAREALFGQ
Ga0247766_100047673300022906Plant LitterMNVPLSIVSGGEAAIVEIQGDHVVVRSSIASPPGSTLSMKHGELSVQVKVRGCKRSTEEHLPFRIEGRLVSFTRSAREALFGSDSS
Ga0247779_106327323300022908Plant LitterMNVPLSIVNGGEAAIVENQGDHVVVRSSIASPPGSTLSMKHGELAVQVKVRGCKRLAEAQLPFRIEGRLVSFTRSAREALFGNDSSQ
Ga0247779_111568723300022908Plant LitterMNVPLTIVTGGEAAIVENQGDHVVVRSSIASPPGSTLSMRHGELPVLVKVRGCKRLEESQLPFRIEGRLVSFTRAARETLFGQSPAN
Ga0247783_100993913300022911Plant LitterMNVPLSIVAGGEAAIVENQGDYVVVRSSVASPPGSTLSMKHGQLSVLVKVRGCRRLTEEQLPFRIEGRLVSLTRAARETLFGQAPAD
Ga0247783_101240923300022911Plant LitterMNVPLSLVDGGEAAIVENQGDYVVVRSSIASPPGSTLRMKHGELPVLVKVRGCKRLAESQLPFRIEGRLVSFTRSARDALFGQT
Ga0247783_102645523300022911Plant LitterMNVPLTISNGGEAAIVENQGDHVVVRSSVASPPGSTLSMKHGELAVLVKVRGCKRLPESQLPFRIEGRLVSFTRAAREALFGQ
Ga0247777_117679413300022917Plant LitterMNVPLTIVTGGEAAIVENEGDHVVVRSSIASPPGSTLSMRHGELPVLVKVRGCKRLEESQLPFRIEGRLVSFTRAARETLFGQSPAN
Ga0247755_104090923300023070Plant LitterMNVPLTIVSGGEAAIVENQGDFVVVRSSVASPPGSTLSMKSGELAVAVKVRGCKRLQESSLPFRIEGRLVSFTRAARETLFGQSPAD
Ga0247740_100223473300023092Plant LitterMNVPLTIVTGGEAAIVENQGDHVVVRASVASPPGSTLSMRHGELPVLVKVRGCKRLEERDLPFRIEGRLVSFTRVAREALFGQASAD
Ga0247740_111042513300023092Plant LitterMNVPLSIAAGGEAAIVENQGDHVVVRSSVASPPGSTLSLKHGELPVLVKVRGCKRLPESQLPFRIEGRLVSFTRAAREALFGQTAAD
Ga0247757_10000093443300023097Plant LitterMNVPLTIVTGGEAAIVENQGDHVVVRSSIASPPGSTLSMRHGELPVLVKVRGCKRLEENQLPFRIEGRLVSFTRAARETLFGQSPAN
Ga0247772_1000059303300023264Plant LitterMNVPLTISNGGEAAIVENQGDHVVVRSSVASPPGSTLSMKHGELAVLVKVRGCKRLAESQLPFRIEGRLVSFTRAARDTLFGQTSAD
Ga0247765_105999213300023268Plant LitterPLSIVNGGEAAIVENQGDHVVVRSSIASPPGSTLSMKHGELAVQVKVRGCKRLAEEQLPFRIEGRLVSFTRSAREALFGNDSSQ
Ga0247773_109104323300023269Plant LitterMNVPLSIVNGGEAAIVENQGDHVVVRSSVASPPGSTLSMKHGELPVQVKVRGCKRLTEDLLPFRIEGRLVSFTRSAREALFGNDSSPEQ
Ga0247773_109686923300023269Plant LitterLVNGGQAAIVENQGDHVVVRCSVASPPGSTLSMRYGELSLQMKVRGCKRLEESPLPFRIEGRLVSFTRAAREALFGRPASD
Ga0247760_1000203373300023272Plant LitterMNVSLSIANGGEAAIVENHGDHVVVRSSVASPPGSTLHMKHGELAVLVKVRGCKRLAEDALPFRIEGRLVSFTRVARDALFGPSASE
Ga0247776_1004430313300023275Plant LitterMNVPLSIVAGGEAAIVENQGDYVVVRSSVASPPGSTLSMKHGQLSVLVKVRGCRRLTEEQLPFRIEGRLVSLTRAARE
Ga0207682_1030332113300025893Miscanthus RhizosphereNVPLSLVDGGEAAIVENQGDYVVVRSSIASPPGSTLRMKHGELPVLVKVRGCKRLAESQLPFRIEGRLVSFTRSARDALFGQT
Ga0207703_1147526813300026035Switchgrass RhizosphereMNVPLSIVSGGEAAIIENQGDHVTVRSSIASPPGSTLSMKHGEFSVLVKVRGCKRLEESELPFRIEGRLVSFTRAAREALFGTI
Ga0207641_1037717923300026088Switchgrass RhizosphereMNVPLSIVNGGEAAIVENQGDHVVVRSSVASPPGSTLSMKHGELSVQVKVRGCKRTTEDRLPFRIEGRLVSFTRAAREALFGSDSSE
Ga0207676_1079051833300026095Switchgrass RhizosphereMNVPLSIVNGGEAAIVENQGDHVVLRSSVASPPGSTLSLKHGELSLQVKVRGCKRLPDDQLPFRIEGRLVSLTRGARDALFGPGTS
Ga0207698_1258977513300026142Corn RhizosphereMNVALTIVRGGDAAIVENAGDYVVVRSSVASPPGSTLSMKHGELAVQVKVRGCKRLAESQLPFRIEGRLVSFTRAAREALFGIASGD
Ga0268266_1078813623300028379Switchgrass RhizosphereMNVPLSIVPGGEAAIVENQGDHVVVRSSIASPPGSTLSMKHGELSVLVKVRGCKRLAESQLPFRIEGRLISLTRVARETLFGQ
Ga0302166_1002773023300028652FenMNVPLSIVNGGEAAIVENQGDYVVVRSSVASPPGSTLSMKHGELSVLVKVRGCKRLTESQMPFRIDGRLVSFTRAARDALFGHSATDVRRS
Ga0302259_108974723300028861FenNQGDYVVVRSSVASPPGSTLSMKHGELSVLVKVRGCKRLTESQMPFRIDGRLVSFTRAARDALFGHSATDVRRS
Ga0302254_1008904213300028870FenVPLSIVNGGEAAIVENQGDYVVVRSSVASPPGSTLSMKHGELSVLVKVRGCKRLTESQMPFRIDGRLVSFTRAARDALFGHSATDVRRS
Ga0302298_1027243123300029980FenMKVLLSIASGGEAAIVENQGDYVVVRSSVASPPGSTLSLKHGELPVQVKVRGCKRLDGELPFRIEGRLVSFTRAAREALFGST
Ga0311332_1004808223300029984FenMKVLLSIASGGEAAIVENQGDYVVVRSSVASPPGSTLSLKHGELPVLVKVRGCKRLDGELPFRIEGRLVSFTRAARDALFGST
Ga0311332_1113321023300029984FenMKVLLSIASGGEAAIVENQGDYVVVRSSVASPPGSTLSLKHGELPVQVKVRACKRLDGELPFRIEGRLVSFTRAAREALFGST
Ga0311334_1003811123300029987FenMNVPLAIVNGGDAAIVENQGDFVVLRSSIASPPGSTLSMRHGELAVLVKVRGCKRLAESQLPFRIEGRLVSFTRAARDALFGQPSAKIES
Ga0311336_1126143223300029990FenGGEAAIVENQGDYVVVRSSVASPPGSTLSMKHGELSVLVKVRGCKRLTESQMPFRIDGRLVSFTRAARDALFGHSATDVRRS
Ga0302175_1015480413300030014FenMKVLLSIASGGEAAIVENQGDYVVVRSSVASPPGSTLSLKHGELPVLVKVRGCKRLDGELPFRIEGRLVS
Ga0311348_1035963913300030019FenMNVPLSIVNGGEAAIVENQGDYVVVRSSVASPPGSTLSMKHGELSVLVKVRGCKRLTESQMPFRIDGRLV
Ga0311348_1036789923300030019FenMKVLLSIASGGEAAIVENQGDYVVVRSSVASPPGSTLSLKHGELPVLVKVRGCKRLDGELPFRIEGRLVSFTRAAREALFGST
Ga0311333_1014631013300030114FenMNVPLSIVNGGEAAIVENQGDYVVVRSSVASPPGSTLSMKHGELSVLVKVRGCKRLTESQMPFRIDGRLVSFTRAARDALF
Ga0311333_1035050023300030114FenMKVLLSIASGGEAAIVENQGDYVVVRSSVASPPGSTLSLKHGELTVLVKVRGCKRLDGELPFRIEGRLVSFTRAARDALFGST
Ga0311333_1161021623300030114FenMMVLLSIVSGGDAAIVENQGDHVVVRSSVASPPGSTLSMKHGETPVQVKVRGCKRLDGELPFRIEGRLVSFTRTAREALFGAAS
Ga0311366_1051827523300030943FenMNVPLSIVNGGEAAIVENQGDYVVVRSSVASPPGSTLSMKHGELSVLVKVRGCKRLTESQMPFRIDGRLVSFTRA
Ga0170824_10521864413300031231Forest SoilPERSPRGHATRAKGVNVPLTVASGGDAAIMENQGDHVTLRSSVPSPPGSTLALLHEDLAIQVKVRGCKRLTDAEQALPFRIEGRFVSLTRAAREKLFGP
Ga0302323_10214007323300031232FenMNVPLSIVNGGQAAIVENQGDYVTVRSSVASPPGSTLSMKHGELSVLVKVRGCKRLEDNELPFRIEGRLVSFTRAARLALFGIA
Ga0302323_10329502423300031232FenMNVPLSIVAGGEAAIVENQGDYVVVRASVASPPGSTLSMKHGQLSVLVKVRGCRRLTEEQLPFRIEGRLVSFTRAARETLFGQAPAD
Ga0302323_10330265513300031232FenMNVPLLVVSGGEAAIVENQGDHVVLRSSVASPPGSTLSLKHGELPVLVKVRGCRRLAEAELPFRIEGRLVSFTRLAREALFGQANEA
Ga0307513_1005879543300031456EctomycorrhizaMNVPLTIVSGGAAAIVENQGDHVVVRSSVASPPGSTLSMKHGDISVLVKVRGCKRLPEPELPFRIEGRLVSFTRAARDVLFGQASRA
Ga0307513_1020711533300031456EctomycorrhizaIVENNGDHVFVRSSVASPPGSTLTLRHGETPVLVKVRGCKRIDESELPFRIEGRLVTCTRATREAMFGALPAEPETK
Ga0307513_1043342423300031456EctomycorrhizaMNVPLSIASGGEAAIVENQGDHVVVRSSVASPPGSTLSMKHGEISVLVKVRGCKRLEENELPFRIEGRLVSFTRAAREVLFGAA
Ga0170818_10938303313300031474Forest SoilVNVPLSVASGGDAAIVENQGDHVTLRSSVPSPPGSTLALLHEDLAIQVKVRGCKRLTDAEQALPFRIEGRFVSLTRAAREKLFGP
Ga0311364_1028123713300031521FenMNVPLAIVNGGDAAIVENQGDFVVLRSSIASPPGSTLSMKHDELAVLVKVRGCKRLAESQLPFRIEGRLVSFTRAAREALFGQPSSSRES
Ga0265313_1042442923300031595RhizosphereVNVELSVASGGAAAIVENQGDHVTVRSSVASPPGSTLILVHQGLTVSVKVRGCKRLDESALPFRIEGRLVSLTRAGREQLF
Ga0307508_1007681343300031616EctomycorrhizaMSEVLNVPLTLANGGAAAIVENQGDHVTVRSSVPSPPGSTLALFQQGLAVHIKVRGCKRLAESELPFRIEGRLVSLTRAEREQLFGVKPEA
Ga0302321_10068157113300031726FenGDAAIVENQGDFVVLRSSIASPPGSTLSMKHDELAVLVKVRGCKRLAESQLPFRIEGRLVSFTRAAREALFGQPSSSRES
Ga0302321_10259748913300031726FenMNVPLSIVSGGEAAIVENQGDHVTVRSSVASPPGSTLSMKHGELSVLVKVRGCKRLDENELPFRIEGRLVSFTRAAREALFGAP
Ga0302321_10281408923300031726FenMNVPLSIVNGGQAAIVENQGDYVTVRSSVASPPGSTLSMKHGELSVLVKVRGCKRLEDNELPFRIEGRLVSFTRAARLALFGIAQD
Ga0308175_10052341323300031938SoilMNVALSIVNGGEAKIVENQGDHVVVRSSVASPPGSTLSMKQGELSVLVKVRGCKRLADGELPFRIEGRLVSCTRAAREALFGRAE
Ga0315910_1152149523300032144SoilMMVQLSIVNGGEAAIVENQGDFVVVRSSVASPPGSTLSMKHGELSVSVKVRGCKRLAEEPLPFRIEGRLVSFTRAAREALFGKIQSD


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.