NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F085886

Metagenome Family F085886

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F085886
Family Type Metagenome
Number of Sequences 111
Average Sequence Length 68 residues
Representative Sequence MPKFAVGDYVERIGSLVPEYMRSGVIIRVIPNDQGLDLFNEYEVNFGNQVIAIFYETQLRLATKNP
Number of Associated Samples 56
Number of Associated Scaffolds 111

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 76.15 %
% of genes near scaffold ends (potentially truncated) 17.12 %
% of genes from short scaffolds (< 2000 bps) 85.59 %
Associated GOLD sequencing projects 51
AlphaFold2 3D model prediction Yes
3D model pTM-score0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (84.685 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(43.243 % of family members)
Environment Ontology (ENVO) Unclassified
(29.730 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(58.559 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.
14NP_02077980
2INPgaii200_09181611
3INPhiseqgaiiFebDRAFT_1017306922
4INPhiseqgaiiFebDRAFT_1017310542
5INPhiseqgaiiFebDRAFT_1017313202
6INPhiseqgaiiFebDRAFT_1017319951
7INPhiseqgaiiFebDRAFT_1048760662
8F14TC_1002668577
9Ga0063356_1003622752
10Ga0063356_1015750842
11Ga0063356_1039314162
12Ga0062591_1014363071
13Ga0065704_107839441
14Ga0065705_105851381
15Ga0065707_103709751
16Ga0065707_107439371
17Ga0070690_1016542901
18Ga0066388_1005995151
19Ga0066388_1012630382
20Ga0066388_1019886952
21Ga0066388_1026642702
22Ga0066388_1042679182
23Ga0066388_1069545161
24Ga0070673_1012672301
25Ga0070688_1006054042
26Ga0066905_1000017615
27Ga0066903_1005659172
28Ga0066903_1018904472
29Ga0066903_1019245972
30Ga0066903_1041605441
31Ga0066903_1062509851
32Ga0066903_1075459071
33Ga0066903_1085239972
34Ga0075417_100312401
35Ga0075417_102320261
36Ga0075417_103961663
37Ga0075427_100873991
38Ga0079222_114514112
39Ga0075428_1000768403
40Ga0075428_1001071832
41Ga0075428_1002168574
42Ga0075428_1012884492
43Ga0075428_1015687971
44Ga0075421_1000948182
45Ga0075421_1001355914
46Ga0075421_1008702242
47Ga0075421_1015438451
48Ga0075431_1008261681
49Ga0075433_104943131
50Ga0075433_108035471
51Ga0075425_1002097663
52Ga0075425_1004598033
53Ga0075425_1015459931
54Ga0075434_1006028962
55Ga0075434_1022349082
56Ga0075429_1003475392
57Ga0075429_1015265321
58Ga0075426_101965832
59Ga0075424_1001853076
60Ga0075424_1012364023
61Ga0075436_1009326531
62Ga0075436_1011200731
63Ga0075419_110994092
64Ga0075419_113215251
65Ga0079218_134310692
66Ga0075418_125842941
67Ga0075418_128054772
68Ga0114129_101194061
69Ga0114129_102105843
70Ga0114129_109920762
71Ga0114129_122424522
72Ga0075423_104933181
73Ga0075423_105520922
74Ga0075423_107941801
75Ga0075423_110603201
76Ga0075423_112117461
77Ga0075423_122850361
78Ga0126374_118991041
79Ga0126380_103099061
80Ga0126384_104110122
81Ga0126384_107977732
82Ga0126384_120053512
83Ga0126370_101327893
84Ga0126376_119125011
85Ga0126372_106066212
86Ga0126372_110074192
87Ga0126377_107355622
88Ga0126377_120211631
89Ga0126381_1046480062
90Ga0126383_121622202
91Ga0126383_128615981
92Ga0150985_1103145372
93Ga0137367_104094432
94Ga0137366_104632853
95Ga0150984_1082316532
96Ga0126375_116301351
97Ga0126369_103372683
98Ga0126369_104575272
99Ga0126369_122558221
100Ga0132258_136386472
101Ga0132255_1042243451
102Ga0182032_115753342
103Ga0182037_106009912
104Ga0207652_115321702
105Ga0209814_100695265
106Ga0209382_101828251
107Ga0209382_103530512
108Ga0209382_110426082
109Ga0209382_117090931
110Ga0209382_117788281
111Ga0306925_110855363
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 9.57%    β-sheet: 26.60%    Coil/Unstructured: 63.83%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

5101520253035404550556065MPKFAVGDYVERIGSLVPEYMRSGVIIRVIPNDQGLDLFNEYEVNFGNQVIAIFYETQLRLATKNPSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.76
Powered by PDBe Molstar

Structural matches with SCOPe domains



 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
84.7%15.3%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Vadose Zone Soil
Tropical Forest Soil
Switchgrass Rhizosphere
Soil
Agricultural Soil
Soil
Soil
Soil
Tropical Forest Soil
Corn Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Rhizosphere
Switchgrass Rhizosphere
Avena Fatua Rhizosphere
Arabidopsis Thaliana Rhizosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Avena Fatua Rhizosphere
Switchgrass, Maize And Mischanthus Litter
16.2%5.4%12.6%43.2%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
4NP_020779802170459021Switchgrass, Maize And Mischanthus LitterMPRFKVGDHVERIGSLVPEWMRSGVILRVIPNNQGLDLFNEYEVNFGDQVIAIFYETQLRLAAADRT
INPgaii200_091816112228664022SoilMPKFAVGDHVERIGSLVPEYMRSGVIIRVIPNDQGQDLFNEYEVNFGNRVIAIFYETQLRLVEQS
INPhiseqgaiiFebDRAFT_10173069223300000364SoilMPKFAVGDHVERIGSLVPEYMRSGVIIRVIPNDQGLDLFNEYEVDFGNQVIAIFYETQLXLXXXS*
INPhiseqgaiiFebDRAFT_10173105423300000364SoilMPKFAVGDYVERIGSLVPEYMRSGVIXRVIPNDQGQDLFNEYEVNFGNRVIAIFYETQLRLATTDQT*
INPhiseqgaiiFebDRAFT_10173132023300000364SoilMPKFKVGDHVERIGVLVPEYMRSGVITRVTPNDEGQDLFNEYEVKFGNQVVAILYESQLRLATKANP*
INPhiseqgaiiFebDRAFT_10173199513300000364SoilVSIQPGIGCAAMPKFKIGDHVERVGGIIPEYMREGIIIRVIPDEHRHDLFNAYEVDFGHQVIAILYESQLRLATKANP*
INPhiseqgaiiFebDRAFT_10487606623300000364SoilMPRFKVGDRVERIGSLIPEYMRSGVVIRVIPNEHADWFSEYEVNFGNQQIATFYETQLRPANEASDVNP*
F14TC_10026685773300000559SoilMPKFKVGDHVERIGVLVPEYMRSGVSTRVTPNDEGQDLFNEYEVNFGNQVVAILYESQLRLAS*
Ga0063356_10036227523300004463Arabidopsis Thaliana RhizosphereMPKFKVGDRVERIGSLVPIYMKNGEIIRVIPNEHGFAEFTEYEVNFGNRMIGAFYETQLKPADETANPQYRE*
Ga0063356_10157508423300004463Arabidopsis Thaliana RhizosphereMPKFKVGDHVERIGTLVPPYMKSGVVTFVILSKEGLAWFNEYEVNFGRTGIATFYETQLQLIKAAHAG*
Ga0063356_10393141623300004463Arabidopsis Thaliana RhizosphereMPRFKVGDRVERTGSLVPEYMKTGRVTLVIPNQNGLDWFTEYEVDFGRITARLYETQLRLIDPMKDHSSTL*
Ga0062591_10143630713300004643SoilMPKFNVGDRVERVGSLIPQYMQIGIITRIILNEDGVEMFTEYEVNFGNHLIALFYETQLRLVNVAAHNN*
Ga0065704_1078394413300005289Switchgrass RhizosphereGADAAAPSEEGMFGIGVLVPDYMRSGDIVRVIPNKDGLELFTEYEVNFNNQLVATFYETQLRLVKPNKAATFKAAP*
Ga0065705_1058513813300005294Switchgrass RhizosphereVHFYRNVVREYHRRGMPKFKVGNHVERIGVLVPEYMRSGVVTRVTPNDEGQDLFNEYEVNFGNQVVAILYESQLRLATKANP*
Ga0065707_1037097513300005295Switchgrass RhizosphereMPKFKVGDHVERIGVLVPEYMRSGVITRVTPNDEGQDLFNEYEVNFGNQVVAILYESQLRLATKANP*
Ga0065707_1074393713300005295Switchgrass RhizosphereVPKFKVGDRVERIGWLVPEYMRKGIVTGVIPNKQGHDSFNEYEVNFGNQLIMILYQTQLRLAP*SR
Ga0070690_10165429013300005330Switchgrass RhizosphereMARFQVGDKVERIGSLVPEYMKHGVVVRIMTNEHSDLFTAYEVSFGSQMIAIFYETQLRPANDSN*
Ga0066388_10059951513300005332Tropical Forest SoilMPKSAVGDYVERIGSLVLNTCEAVSLRESFRMTRAVDLFNEYEVNFGNQVIAIFYETQLRLVTKANP*
Ga0066388_10126303823300005332Tropical Forest SoilMPKFKVGDEVERIGSLVPPYMKFGVIVRVIPNKDGPDWSTQYEVNFGNQVKAKFYEMQLRRAEGSSAPV*
Ga0066388_10198869523300005332Tropical Forest SoilMPKFKVGDRVERIGSLVPEWMRSGVILRVIPNDQRQDLFNEYEVNFGNQVIAIFYETQLRLVDTQD*
Ga0066388_10266427023300005332Tropical Forest SoilVPKFKVGDRVERIGWLVPEYMRKGIVTGVTLNKQGQDSFNEYEVNFGNQLIMILFETQLRLVTTDPH*
Ga0066388_10426791823300005332Tropical Forest SoilMPKFNVGDRVERIGSLVPEYMRSGVVTRVIPNPQGQDLFNEYEVNFDNQLIAIFYETQLRLAPKQ*
Ga0066388_10695451613300005332Tropical Forest SoilMPKFKVGDRVERIGTLVPLYMTTGVIIRVMPNPKMDRFTEYEVDFGGQLIATFYETQLRLAPKASKAHPR*
Ga0070673_10126723013300005364Switchgrass RhizosphereMPKFKVGDRVVRIGTLIPEYLREGVITRVIPNKDGLHLFTEYEVELDDKQIAVFYETQLRRAYPSTDRKKG*
Ga0070688_10060540423300005365Switchgrass RhizosphereMARFQVGDKVERIGSLVPEYMKHGVVVRIMPNEHSDLFTAYEVSFGSQMIAIFYETQLRPANDSN*
Ga0066905_10000176153300005713Tropical Forest SoilMPKFKVGDHVERVGSLVPEYMKSGVITRVIPNDQGQDLFNEYEVNFGNQVIAILYERQLRLAPTANP*
Ga0066903_10056591723300005764Tropical Forest SoilVPKFKVGDRVERVGWLVPEYMRKGIVTGVIPNKQRQDSFNEYEVNFGNKLIMIVYETQLRLVPTDPQ*
Ga0066903_10189044723300005764Tropical Forest SoilMPRFKVGDRVERIGSLIPEYMRSGVVVRVIPNEHADWFSEYEVNFGNQQIATFYETQLRPANEASDVNP*
Ga0066903_10192459723300005764Tropical Forest SoilLNAKFAVGDYVERIGSLVPEYMRSDVIIRVIPNDQGLDLFNEYEVNFGDQVIAIFYQTQLRLATKANA*
Ga0066903_10416054413300005764Tropical Forest SoilMSKFQTTSKFKIGDHVERIGVLIPKYMQKGVVTRIIPNPQGIDWFTEYEVNFEDRLIATFYQTQLRLLRPAV
Ga0066903_10625098513300005764Tropical Forest SoilMSKFNVGDQVERIGSLVPEYMRTGIVTKVIPNQDGLDWFTEYEVNFGNKTIAIFYETQLRLVKTAPDN*
Ga0066903_10754590713300005764Tropical Forest SoilRRTALMPKFNLGDQLERIGSLVPEYMRIGIVTKVVPNKDGMVWFTEYEVNFGNKMIAIFYETQLRLINASEK*
Ga0066903_10852399723300005764Tropical Forest SoilMPKFAVGDYVERIGSLVPEYMRSGVITRVIPNDQGLDLFNEYEVNFGNQVIAIFYETQLRTKANP*
Ga0075417_1003124013300006049Populus RhizosphereMPKFAVGDYVERIGSLVPEYMRNGVVIRLIPNDQGLDLFNEYEVNFGNQVIAIFYETQLRLATKANP*
Ga0075417_1023202613300006049Populus RhizosphereMPKFKVGDYVERIGSLVPEYMQSGVVTRVIPNDQGLDLFNEYEVNFGNQVVAILYESQLQATKPNP*
Ga0075417_1039616633300006049Populus RhizosphereMPKFKIGDHVERIGVLVPEYMRHGVVTRVIPNTETNGLDWLTEYEVNFDNQQIATFYETQVRLVESPTD*
Ga0075427_1008739913300006194Populus RhizosphereMPKFAVGDYVERIGSLVPEYMQSGVVTRVIPNDQGLDLFNEYEVNFGNQVVAILYESQLQATKPNP*
Ga0079222_1145141123300006755Agricultural SoilMPKFAVGDYVERIGSLVPEYMRVIIRVIPNDQGLDLFNEYEVNFGNQVIAIFYETQLQLATKPNP*
Ga0075428_10007684033300006844Populus RhizosphereMPKFAVGDHVERIGSLVPEYMRSGVITRVIPNDQGQDLFNEYEVNFSNQVVAILYESQLQLANKANP*
Ga0075428_10010718323300006844Populus RhizosphereMPRFKVGDRVVRIGTLVPEYMREGTIVRVIPNDQGLDLFNEYEVNFGNQVIALLYESQLQLAAEANP*
Ga0075428_10021685743300006844Populus RhizosphereMPRFKVGDRVERVGTLIPPYLKKGTVTKVMPNKDGLDRFTEYEVNFGNQIVATFYETQLRLAEAGDNAATT*
Ga0075428_10128844923300006844Populus RhizosphereVPKFKVGDRVERIGWIVPEYMRNGIVTGVIPNKQGQDSFNEYKVNFGNQLIMILYETQLRLVPTDPH*
Ga0075428_10156879713300006844Populus RhizosphereDSLVLEYHPPRMPKFRVGDQVERIGVLVPEYMRSGVITGVIPNDQGQDLFNEYEVDFGNEVIAILYETQLQLAATDRT*
Ga0075421_10009481823300006845Populus RhizosphereMPKFAVGDYVERIGSLVPEYMRNGVVILLIPNDQGLDLFNEYEVNFGNQVIAIFYETQLRLATKANP*
Ga0075421_10013559143300006845Populus RhizosphereVAIIGGNGVPSRTAMPRFKVGDRVVRIGTLVPEYMREGTIVRVIPNDQGLDLFNEYEVNFGNQVIALLYESQLQLAAEANP*
Ga0075421_10087022423300006845Populus RhizosphereVPRFKIGDRVERIGWLVPEYMSKGIVTGVIPNKQGQDSFNEYEVNFGNRLIMILYETYD*
Ga0075421_10154384513300006845Populus RhizosphereMPKFAVGDYVERIGSLVPEYMRSGVIIRVIPNDQGLDLFNEYEVNFGNQVIAIFYETQLRLATKNP*
Ga0075431_10082616813300006847Populus RhizosphereMPKFKVGDHVERIGSLVPPYMHYGTVTRVTPYKSGMDWLTEYEVNFGDQLIGVFYETQLRLLKRAKDSS*
Ga0075433_1049431313300006852Populus RhizosphereMPNFRVGDEVERIGALVPDYMRSGDIVRVIPNKDGLELFTEYEVNFNNQLVATFYETQLRLVKPNKAATFKAAP*
Ga0075433_1080354713300006852Populus RhizosphereMPKFKVGDRVERIGSLVPEWMHSGVIFQSFQMIRAKTLFNEYEVNFGNQVIAIFYETQLRLVDITS*
Ga0075425_10020976633300006854Populus RhizosphereMPKFKIGDQVERVGSLVAEWMRSGVILRVIPNNQGLNLFNEYEVHFGNQVIAIFYESELRLAVVDPRWE*
Ga0075425_10045980333300006854Populus RhizosphereMPKFKVGDQVERVGSLVPEYMKSGVITRVIPNDQGQDLFNEYEVNFGNQVVAILYESQLQLATKANP*
Ga0075425_10154599313300006854Populus RhizosphereVPKFKVGDRVERVGWLVPEYMRKGIVTGVIPNKQGQDSFNEYEVNFGNQLIMILYETQLRLAPTDPH*
Ga0075434_10060289623300006871Populus RhizosphereMPRFKVGDRVERIGSLIPEYMRSGVVVRVIPNEHADWFSEYEVNFGNQQIATFYETQLRPANDSSDVNS*
Ga0075434_10223490823300006871Populus RhizosphereMPKFKVGDRVERIGSLVPEYMRCGIVTEVIPNDQGRDLFNEYEVNFGNQLIATFYETQLRLYRSPTD*
Ga0075429_10034753923300006880Populus RhizosphereVPKFKVGDRVERIGWLVPEYMRNGIVTGVIPNKQGQDSFNEYKVNFGNQLIMILYETQLRLVPTDPH*
Ga0075429_10152653213300006880Populus RhizosphereNGVPSRTAMPRFKVGDRVVRIGTLVPEYMREGTIVRVIPNDQGLDLFNEYEVNFGNQVIALLYESQLQLAAEANP*
Ga0075426_1019658323300006903Populus RhizosphereMPKFAVGDYVERIGSLVPEYMPNGVVIRLIPNDQGLDLFNEYEVNFGNQVIAIFYETQLRLATKANP*
Ga0075424_10018530763300006904Populus RhizosphereVPKFKVGDRVERVGWLVPEYMRKGIVTGVIPNKQGQDSFNEYEVNFGNQLIMILFETQLRLVTTDPH*
Ga0075424_10123640233300006904Populus RhizosphereMPKFGIGDHVERIGSLVPEYMRSGVITQVIPNAQGLDLFNEYEVHFGNQVIAIFYETQL
Ga0075436_10093265313300006914Populus RhizosphereMAKFKVGDRVERIGSLVPEWMRSGVIMRVIPNDQGQDLFNEYEVNFGNQVVAILYESQLQLATKANP*
Ga0075436_10112007313300006914Populus RhizosphereVPKFKVGDRVERIGWLVPEYMRKGIVTGVIPNKQGHDSFNEYEVNFGNQLIMILYETQLRLAPTDPR*
Ga0075419_1109940923300006969Populus RhizosphereMPKFKIGDHVERIGVLVPEYMRHGVVTRVIPNTETNGLDWLTEYEVNFDNQQIATFYETQ
Ga0075419_1132152513300006969Populus RhizosphereVPRFKIGDRVERIGWLVPEYMSKGIVTGVIPNKQGQDSFNEYEVNFGNRLIMILYETQLR
Ga0079218_1343106923300007004Agricultural SoilMPRFKVGDRVERVGSLIPLYMKKGVIVRVIQDKNLPDWFTQYEVNFADKLIATFYETQLLESARDSN*
Ga0075418_1258429413300009100Populus RhizosphereMVQEAIMPKFKIGDHVERIGVLVPEYMRHGVVTRVIPNTETNGLDWLTEYEVNFDNQQIATFYETQVRLVESPTD*
Ga0075418_1280547723300009100Populus RhizosphereMPRFKVGDRVERVGTLIPPYLKKGTVTKVTPNKDGLDRFTEYEVNFGNQIVATFYETQLRLAEAGDNAATT*
Ga0114129_1011940613300009147Populus RhizosphereVPKFKVGDRVERIGWLAPEYMRNGIVTGVIPNKQGQDPFNEYKVNFGNQLIMILYETQLRLVPTDPH*
Ga0114129_1021058433300009147Populus RhizosphereMPKFKVGDRVERIGSLVPEYMRSGIITRVIPNNQGMDLFNEYEVNFDNRLIAIFYETQLRLAAADQN*
Ga0114129_1099207623300009147Populus RhizosphereMPKFKVGDRVERIGWLVPEYMRKGIVTGVIPNKQGHDSFNEYEVNFGNQLIMILYETQLRLAPRDPH*
Ga0114129_1224245223300009147Populus RhizosphereMVRYDAALALQQGAAQMPKFKVGDRVERIGSLVPEWMHSGVIMRVIPNDQGQDLFNEYEVNFGNQVVAILYESQLRLATKANP*
Ga0075423_1049331813300009162Populus RhizosphereMPKFKVGDRVERIGSLVPEWRRSGVIIRVIPNDQGLDLFNEYEVNVGNQVIAIFYETQLRLSSA*
Ga0075423_1055209223300009162Populus RhizosphereCAGKRSYLAVPKFKVGDRVERVGWLVPEYMRKGIVTGVIPNKQGQDSFNEYEVNFGNQLIMILYETQLRLAPTDPH*
Ga0075423_1079418013300009162Populus RhizosphereMPRFKVGDRVERIGSLIPEYMRSGVVVRVIPNEHADWFSEYEVNFGNQQIATFYETQLRPANDSSDVN
Ga0075423_1106032013300009162Populus RhizosphereVPRFKIGDRVERIGWLVPEYMRRGIVTGIIPNKQGQDSFNEYEVNFGNRLIMILYETQLRLVATDPH*
Ga0075423_1121174613300009162Populus RhizosphereMAKFKVGDRVERIGSLVPEWMRSGVIMRVIPNDQGQDLFNEYEVNFGNQVIAIFYETQLRLVAEAGC*
Ga0075423_1228503613300009162Populus RhizosphereRSYLAVPKFKVGDRVERIGWLAPEYMRNGIVTGVIPNKQGQDPFNEYKVNFGNQLIMILYETQLRLVPTDPH*
Ga0126374_1189910413300009792Tropical Forest SoilMTKFKVGDRVERIGWLVPEYMRKGIVTGVIPNKQGQDSFNEYEVNFDNQLIMILFETQLRLAPTDPH*
Ga0126380_1030990613300010043Tropical Forest SoilVPKFKVGDRVERIGWLVPEYMRNGIVTGVIPNKQGQDSFNEYKVNFGNQLIM
Ga0126384_1041101223300010046Tropical Forest SoilMPKFAVGDYVERIGSLVPEYMRSGVITRVIPNDQGLELFNEYEVNFGNQVIAIFYETQLRLVTNNP*
Ga0126384_1079777323300010046Tropical Forest SoilMPKFKVGDHVERVGSLVPEYMKSGVITRVIPNDQGQDLFNEYEVNFGNQVIAIFYESQLRLATTANP*
Ga0126384_1200535123300010046Tropical Forest SoilMGLMPKFKVGDHVERIGVLASGQMRNGVVVRVIPNKIGQDLFYEYEVTFGTRMIAVLYETQLRLASDSN*
Ga0126370_1013278933300010358Tropical Forest SoilKFKVGDRVERVGWLVPEYMRKGIVTGVIPNKQRQDSFNEYEVNFGNKLIMILSETQLRLVPTDPQ*
Ga0126376_1191250113300010359Tropical Forest SoilMPKFAVGDYVERIGSLVPEYMRSGVITRVIPNDQGLALFNEHEVNFGNQVIAIFYETQLRLVTKANP*
Ga0126372_1060662123300010360Tropical Forest SoilMPKFKVGDRVERIGWLVPEYMRKGIVTGVIPNKQGHDSFNEYEVNFGNQLIMILFETQLRLVTTDPH*
Ga0126372_1100741923300010360Tropical Forest SoilLQQGAAIMPKFKVADRVERIGSLVPDYMRNGIVTRVIPNNEGQDLFNEYEVNFGNQLIATFYETQLRLARDPN*
Ga0126377_1073556223300010362Tropical Forest SoilMPKFKVGDQVERIGSLVPEYMRCGIVTGVIPNDLGQDLFNEYEANFGNQLIATFYETQLRLLRSPTD*
Ga0126377_1202116313300010362Tropical Forest SoilMPKFKVGDHVERVGSLVPEYMKSGVITRVIPNDQGLDLFNENEVSFGNQMIAIFYQMRESLGLKNG*
Ga0126381_10464800623300010376Tropical Forest SoilMPKFAVGDYVERIGSLVPEYMRSGVSTRVIPNDQGLDLFNEYEVNFGNQVIAIFYETQSRLVTKANP*
Ga0126383_1216222023300010398Tropical Forest SoilMPKFAVGDYVERIGSLVPEYMRSGVITRVIPNDQGLDLFNEYEVNYGNQVIAIFYETQLRLVTKANP*
Ga0126383_1286159813300010398Tropical Forest SoilMPKFKVGDRVERIGSLVPEWMRSGVILRVIPNDQRQDLFNEYEVNFGNQVIAIFYETQLRLVDTPD*
Ga0150985_11031453723300012212Avena Fatua RhizosphereLIGRGTALMPNFKVGDHVERTGSLVPEYMRSGIVIKVIPNKHRLDWFTEYEVNFDNKMIGIFYETQLRLVTAANDPDK*
Ga0137367_1040944323300012353Vadose Zone SoilMPRFAVGDHVERIGSLVPEYMRSGVIIRVIPNDQGLDMFNEYEVNFGNQVIAIIYENQLRLETNNP*
Ga0137366_1046328533300012354Vadose Zone SoilMPKFKVGDHVERIGSHVPEYMRSGIVTRVIPNQQGHHLFNEYEVNFGNQVIALFYETQLCLVESPENST*
Ga0150984_10823165323300012469Avena Fatua RhizosphereMFKVGDQVERIGSLVPQYMRNGTIARIVPNKDGIPWLTEYEVNFGNQLIATFYETQLRLVKLPSDGDFGRTHY*
Ga0126375_1163013513300012948Tropical Forest SoilMPKFKVGDRIERIGWLVPEYMRKGIVTGVIPNKQGQDSFNEYEVNFGNKLIMIVYETQLRLVPTDPQ*
Ga0126369_1033726833300012971Tropical Forest SoilMPKFKIGDRVERIGSLVPDYMSSGIVTRVIPNKEGQDLFNEYEVNFGNQLTATFYETQLRLARDPN*
Ga0126369_1045752723300012971Tropical Forest SoilMPRFKVGDRVERIGSLIPEYMRSGVVVRVIPNEHADWFSEYEVNFGNQQIATFYETQLRPANEAPDVNP*
Ga0126369_1225582213300012971Tropical Forest SoilFKVGDRVERVGWLVPEYMRKGIVTGVIPNKQRQDSFNEYEVNFGNKLIMILSETQLRLVPTDPQ*
Ga0132258_1363864723300015371Arabidopsis RhizosphereMPRFKVGDHVERVGVLIPPYMRDGTITRVIPNKDGLDWFTEYEVNFGNQIIAVFYETQLRLVKPATK*
Ga0132255_10422434513300015374Arabidopsis RhizosphereSRVSIQPGIGCAAMPKFKIGDHVERVGGIIPEYMREGIIIRVIPDEHRHDLFNAYEVDFGHQVIAILYESQLRLATKANP*
Ga0182032_1157533423300016357SoilMPRFKVGDRVERIGSLIPEYMRSGVVVRVIPNEHADWFSEYEVNFGNQQIATFYETQLRPANEAPDVNP
Ga0182037_1060099123300016404SoilMSKFKIGDHVERIGSLVPQYMRSGIVTKVIPNKDGMDWFTEYEVNFGNKTIAVFYQTQLRLVKAGMDSV
Ga0207652_1153217023300025921Corn RhizosphereMPKFKVGDHVERTGTLVPDYMHYGDVIRVIPNSQGLYWFTQYEVDFGNQLIRTLYETQLQLGKAVQDSG
Ga0209814_1006952653300027873Populus RhizosphereMPKFAVGDYVERIGSLVPEYMRNGVVIRLIPNDQGLDLFNEYEVNFGNQVIAIFYETQLRLATKANP
Ga0209382_1018282513300027909Populus RhizosphereKFKIGDHVERIGVLVPEYMRHGVVTRVIPNTETNGLDWLTEYEVNFDNQQIATFYETQVRLVESPTD
Ga0209382_1035305123300027909Populus RhizosphereMPRFKVGDRVVRIGTLVPEYMREGTIVRVIPNDQGLDLFNEYEVNFGNQVIALLYESQLQLAAEANP
Ga0209382_1104260823300027909Populus RhizosphereVPKFKVGDRVERIGWIVPEYMRNGIVTGVIPNKQGQDSFNEYKVNFGNQLIMILYETQLRLVPTDPH
Ga0209382_1170909313300027909Populus RhizosphereVPRFKIGDRVERIGWLVPEYMSKGIVTGVIPNKQGQDSFNEYEVNFGNRLIMILYETYD
Ga0209382_1177882813300027909Populus RhizosphereVPKFKVGDRVERIGWVVPEYMHKSIVTGVIPNKQGLDSFNEYEVNFGNQLIMILYET
Ga0306925_1108553633300031890SoilRPVLFLAVGSGNMPRFKVGDRVERIGSLIPEYMRSGVVVRVIPNEHADWFSEYEVNFGNQQIATFYETQLRPANEAPDVNP


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.