Metagenome Family F085802

Basic Information
Family ID	F085802
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	64 residues
Representative Sequence	KTLSITYLKVIKVPTKITPQQAAIAEKIPVLIKVVFLLVILLRIFIFERCIYILQYT
Number of Associated Samples	84
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	17.27 %
% of genes near scaffold ends (potentially truncated)	61.26 %
% of genes from short scaffolds (< 2000 bps)	94.59 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (63.964 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (39.640 % of family members)
Environment Ontology (ENVO)	Unclassified (78.378 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (90.090 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88 1GOS2226_10315611 2GOS2244_10166881 3GOS2249_10051252 4GOS2243_10513212 5GOS2245_11121434 6GOScombined01_1015487103 7Ga0066856_102768571 8Ga0066845_103143761 9Ga0066861_102680351 10Ga0066865_101912211 11Ga0068495_14271314 12Ga0115551_11675083 13Ga0115567_102618553 14Ga0115567_108044181 15Ga0115013_105246132 16Ga0115013_113306792 17Ga0114933_100237785 18Ga0115012_101688702 19Ga0115012_113437881 20Ga0129351_11230391 21Ga0160422_109668672 22Ga0163110_106515481 23Ga0163110_107811662 24Ga0163110_107851021 25Ga0163110_110972103 26Ga0163110_113272752 27Ga0163109_106932933 28Ga0163180_103622313 29Ga0163180_103992793 30Ga0163111_106161083 31Ga0163111_111700042 32Ga0163111_122080601 33Ga0163111_122495451 34Ga0163111_124195971 35Ga0163111_124929842 36Ga0163111_125653281 37Ga0171647_11116363 38Ga0181404_10337161 39Ga0181396_10685011 40Ga0181426_11031702 41Ga0181409_12018911 42Ga0181414_11596431 43Ga0181406_11116311 44Ga0181425_10520623 45Ga0181395_11402282 46Ga0181423_13453051 47Ga0181380_10788072 48Ga0181424_100525662 49Ga0181607_105562071 50Ga0181600_102004712 51Ga0181596_100995261 52Ga0211533_10547661 53Ga0211658_11189451 54Ga0211522_10458041 55Ga0211507_10504822 56Ga0211593_11346501 57Ga0211592_10380641 58Ga0211600_10976011 59Ga0211677_104254531 60Ga0211678_101529952 61Ga0211678_102157841 62Ga0211678_102466541 63Ga0211678_103053853 64Ga0211618_100709802 65Ga0211497_101461262 66Ga0211583_100327542 67Ga0211499_100256023 68Ga0211659_101028503 69Ga0211516_103269983 70Ga0211523_101542153 71Ga0211523_102540853 72Ga0211523_102708813 73Ga0211644_103415092 74Ga0211557_104138501 75Ga0211512_105282682 76Ga0211620_100638133 77Ga0211556_103051842 78Ga0211539_101501413 79Ga0211576_102703111 80Ga0211695_100546091 81Ga0211574_103199091 82Ga0211574_103599351 83Ga0211638_103447012 84Ga0211638_106208372 85Ga0211642_104645061 86Ga0211550_101252903 87Ga0211548_103437371 88Ga0211664_102857003 89Ga0211551_103996402 90Ga0211643_106303402 91Ga0211676_102295381 92Ga0211475_104610631 93Ga0211577_102125221 94Ga0211577_107858992 95Ga0211614_103901312 96Ga0209992_102706973 97Ga0209305_10590093 98Ga0209631_101327083 99Ga0208390_10282062 100Ga0208878_10522001 101Ga0209503_102549752 102Ga0209503_102876462 103Ga0315328_101410693 104Ga0315332_104223412 105Ga0310343_115412081 106Ga0315316_109622753 107Ga0315315_100841504 108Ga0315315_102162403 109Ga0315315_106513342 110Ga0315315_107587732 111Ga0315315_110510232
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88 1GOS2226_10315611 2GOS2244_10166881 3GOS2249_10051252 4GOS2245_11121434 5Ga0066861_102680351 6Ga0068495_14271314 7Ga0115567_108044181 8Ga0114933_100237785 9Ga0163110_106515481 10Ga0163111_106161083 11Ga0171647_11116363 12Ga0181409_12018911 13Ga0181395_11402282 14Ga0181423_13453051 15Ga0211592_10380641 16Ga0211600_10976011 17Ga0211516_103269983 18Ga0211523_101542153 19Ga0211523_102708813 20Ga0211557_104138501 21Ga0211676_102295381 22Ga0211614_103901312 23Ga0209992_102706973 24Ga0209631_101327083 25Ga0208878_10522001
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56. 1Ga0211644_103415092 2GOS2249_10051252 3GOS2243_10513212 4Ga0066856_102768571 5Ga0115551_11675083 6Ga0115567_108044181 7Ga0115013_105246132 8Ga0114933_100237785 9Ga0115012_113437881 10Ga0163110_106515481 11Ga0163110_110972103 12Ga0163109_106932933 13Ga0163111_122495451 14Ga0181426_11031702 15Ga0181409_12018911 16Ga0181414_11596431 17Ga0181425_10520623 18Ga0181423_13453051 19Ga0181596_100995261 20Ga0211658_11189451 21Ga0211507_10504822 22Ga0211593_11346501 23Ga0211600_10976011 24Ga0211678_101529952 25Ga0211678_102157841 26Ga0211618_100709802 27Ga0211659_101028503 28Ga0211516_103269983 29Ga0211523_101542153 30Ga0211523_102708813 31Ga0211557_104138501 32Ga0211695_100546091 33Ga0211550_101252903 34Ga0211643_106303402 35Ga0211577_102125221 36Ga0209992_102706973 37Ga0315328_101410693 38Ga0310343_115412081
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.47% β-sheet: 0.00% Coil/Unstructured: 43.53%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF01925	TauE	35.14
PF02910	Succ_DH_flav_C	21.62
PF04295	GD_AH_C	0.90
PF00890	FAD_binding_2	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	35.14
COG2721	Altronate dehydratase	Carbohydrate transport and metabolism [G]	0.90

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.96 %
Unclassified	root	N/A	36.04 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.96 %
Unclassified	root	N/A	36.04 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.96 %
Unclassified	root	N/A	36.04 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	62.16 %
Unclassified	root	N/A	36.04 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	61.26 %
Unclassified	root	N/A	36.04 %

Name	Rank	Taxonomy	Distribution
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	23.42 %
Unclassified	root	N/A	36.04 %

Name	Rank	Taxonomy	Distribution
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	23.42 %
Unclassified	root	N/A	36.04 %

Name	Rank	Taxonomy	Distribution
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	19.82 %
Unclassified	root	N/A	36.04 %

Name	Rank	Taxonomy	Distribution
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	5.41 %
Unclassified	root	N/A	36.04 %
unclassified Candidatus Pelagibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter	1.80 %

Name	Rank	Taxonomy	Distribution
Candidatus Pelagibacter sp. RS39	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. RS39	1.80 %
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	5.41 %
Unclassified	root	N/A	36.04 %

Scaffold	Taxonomy	Length	IMG/M Link
3300001943\|GOS2226_1031561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	1877	Open in IMG/M
3300001946\|GOS2244_1016688	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300001951\|GOS2249_1005125	All Organisms → cellular organisms → Bacteria	1475	Open in IMG/M
3300001965\|GOS2243_1051321	All Organisms → cellular organisms → Bacteria → Proteobacteria	933	Open in IMG/M
3300001966\|GOS2245_1112143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	3722	Open in IMG/M
3300002040\|GOScombined01_101548710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1176	Open in IMG/M
3300005404\|Ga0066856_10276857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	725	Open in IMG/M
3300005432\|Ga0066845_10314376	Not Available	606	Open in IMG/M
3300005522\|Ga0066861_10268035	Not Available	581	Open in IMG/M
3300005523\|Ga0066865_10191221	Not Available	766	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	1.80%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	14.41%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.90%
Oceanic	Environmental → Aquatic → Marine → Oceanic	27.93%
Pelagic	Environmental → Aquatic → Marine → Pelagic	3.60%
Strait	Environmental → Aquatic → Marine → Strait	9.91%
Unclassified	Environmental → Aquatic → Marine → Unclassified	39.64%
Volcanic	Environmental → Aquatic → Marine → Volcanic	1.80%

Habitat	Taxonomy	Distribution
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	13.51%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	2.70%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	39.64%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	14.41%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	11.71%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	9.91%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	3.60%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	1.80%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.90%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	39.64%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	11.71%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	4.50%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	0.90%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.90%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	3.60%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.90%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	2.70%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	9.91%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	7.21%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.80%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.90%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	0.90%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	11.71%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001943	Marine microbial communities from Cape May, New Jersey, USA - GS010	Environmental	Open in IMG/M
3300001946	Marine microbial communities from North James Bay, Santigo Island, Equador	Environmental	Open in IMG/M
3300001951	Marine microbial communities from North Seamore Island, Equador - GS034	Environmental	Open in IMG/M
3300001965	Marine microbial communities from Coastal Floreana, Equador - GS028	Environmental	Open in IMG/M
3300001966	Marine microbial communities from Roca Redonda, Equador - GS030	Environmental	Open in IMG/M
3300002040	GS000c - Sargasso Station 3	Environmental	Open in IMG/M
3300005404	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV205	Environmental	Open in IMG/M
3300005432	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV78	Environmental	Open in IMG/M
3300005522	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV257	Environmental	Open in IMG/M
3300005523	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV265	Environmental	Open in IMG/M

Showing 1 to 10 of 84 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GOS2226_10315611	3300001943	Marine	SITYLKVIKVPTKITPQQAKIAEKIPVLIKVDFLLVILLIIFIFERCIYIPQYTQCKNCQIII*
GOS2244_10166881	3300001946	Marine	YNKTLSITYLKVIKVPSKITPQQAAIAEKIPVLIKVVFLFIILFRIFIFERCIYILQYTQ
GOS2249_10051252	3300001951	Marine	LVKKLPSNNKKLLSITYLKVIKVPTKITPQQAAIAEKIPVLINVVFLLIILLRIFIFKRRIYIPQYTH*
GOS2243_10513212	3300001965	Marine	LVKRHPFKIQKTLNITYLKVIKVPTKITLQQATMAEKIPVLIKVDFLLVILLRIFIFERCIYIPQYTQCKNCQIII*
GOS2245_11121434	3300001966	Marine	LVKKRPSNIKTQNITYLKVIKVPTKITPQHAAIAEKIPVLIKVDFLLAMIFRIFKFERCI
GOScombined01_1015487103	3300002040	Marine	LVKKLPSNIKTLTINYLKVMKVPTIMTPQQAAIAEKIPVLIKVDFLLVILFKIFKFERCI
Ga0066856_102768571	3300005404	Marine	VKKLPSNNKKLLSITYLKVIKVPTKITPQQAAIAEKIPVLINVLFLLVILLSIFIFEKCIYIPQYTR*
Ga0066845_103143761	3300005432	Marine	KTLSITYLKVIKVPTKITPQQAAIAEKIPVLIKVVFLLVILLRIFIFERCIYIPQYTQWKNCQIII*
Ga0066861_102680351	3300005522	Marine	LKFIKVPNNIIPQQAAIAEKIPVLIKVVFLFVILLRIFIFERCIYIPQYTQWKNCQ
Ga0066865_101912211	3300005523	Marine	LVKKHPSNNKKLLSITYLKVIKVPTKITPQQAAIAEKIPVLINVVFLLVILLRIFIFERCIYIPQYTH*
Ga0068495_14271314	3300006337	Marine	MFYLKVIKVPIKITLQQAAIAEKIPVLIKVDLFSVIFWGIFIFGKFIYNSNYTQSKNCQTIIEFK*
Ga0115551_11675083	3300009193	Pelagic Marine	LVKKLPSNNKNFKNITYLKVIKVPTKITPQQAAIAEKIPVLIKVVFLLEILLRIFIFERLIYIPQYTQLKNCQIII*
Ga0115567_102618553	3300009508	Pelagic Marine	TYLKVIKVPTKITPQQAAIAEKIPVLIKVVLLLVILLRIFIFEKCIYILEYTQLENCQIII*
Ga0115567_108044181	3300009508	Pelagic Marine	LELLVKKLPSNNKKLLSITYLKVTKVPTKITLQQAAIAEKIPVLINVVFLLVILLRIFLFEKCIYIPEYTQLKNCQMIIL*
Ga0115013_105246132	3300009550	Marine	LVKKHPSKNKKLKFLFYLKVTKVPIMITPQQAAIAEKIPVLIKVVFLLEIFCRIFIFERCIYIPQYT*
Ga0115013_113306792	3300009550	Marine	VKKLPSDNKKTLNITYLKVIKVPTKITPQQAAIAEKIPVLIKVVFLLVILLRIFIFERCIYILQYTQL*
Ga0114933_100237785	3300009703	Deep Subsurface	LVKKRPSKNKKTLSIAYLKVIKVPTKITLQQAAIAEKIPVLIKVVFLLLIFFKIFIFDKCIYISHTPQKKIVKL*
Ga0115012_101688702	3300009790	Marine	LVKKLPSNNKKLLSITYLKVIKVPNKITPQQAAIAEKIPVLINVVFLLVILLRIFIFERCIYIPQYTH*
Ga0115012_113437881	3300009790	Marine	ILTYLKVIKVPSKITPQHAAIAEIIPVFIKVVFLFVILLRNFIFERCIYILQYTQ*
Ga0129351_11230391	3300010300	Freshwater To Marine Saline Gradient	VIKVPTKITLQQAAIAEKIPVLIKVVFLLVILLKIFIFERCIYIPQYTQWKNCQIII*
Ga0160422_109668672	3300012919	Seawater	VLLVKRHPFKISKTLNITYLKVIKVPTKITPQQAAIAEKIPVLINVVFLLVILVRIFIFERCIYILQYTQ*
Ga0163110_106515481	3300012928	Surface Seawater	KVRKVPTKITPQQAAIAEKIPVFIKVVLLLFIFWKILIFERCIYISEYTQGKNCQTIIT*
Ga0163110_107811662	3300012928	Surface Seawater	LVKQLPSNNKKLLSITYLKVIKVPTKITPQQAAIAEKIPVLINVVFLLVILLRIFIFERCIYIPQYTH*
Ga0163110_107851021	3300012928	Surface Seawater	IITYLKDIKVPIKITPQQATIAEKIPVLIKVVFLLIILFKIFIFERCIYIPQYTQQKNCQIII*
Ga0163110_110972103	3300012928	Surface Seawater	TYLKVIKVPTKITPQQAAIAEKIPVLIKVVFLLVTFWRNFIFERRIYIPQYTQQKNCQILI*
Ga0163110_113272752	3300012928	Surface Seawater	LVKKLPSKKNKNFYIFYLKVIKVPIKITLQQAAIAEKIPVLIKVDLFSVIFWGIFIFGKFIYISNYTQSKNCQTIIEFK*
Ga0163109_106932933	3300012936	Surface Seawater	YLKVIKVPNNMTPQQAAIAEKIPVLINVVFLFVILLKIFIFERCICIPQYTQ*
Ga0163180_103622313	3300012952	Seawater	LVKKLPSNNKKLLSVTYLKVIKVPNKITPQQAAIAEKIPVLINVVFLLVILLRIFIFERCIYILQYTQW*
Ga0163180_103992793	3300012952	Seawater	LKVIKVPTKITPQQAAIAEKIPVLIKVDFLLIILLRIFIFERCIYIPQYTQCKNCQIII*
Ga0163111_106161083	3300012954	Surface Seawater	ELLVKKHPSKNKKLKFLFYLKVTKVPIMITPQQATIAEKIPVLIKVVFLLEIFCRIFIFERCIYIPQYTQ*
Ga0163111_111700042	3300012954	Surface Seawater	LVKKHPSKNKKLKFLFYLKVTKVPIMITPQQAAIAEKIPVLIKVVFLLEIFCKIFIFERCIYIPQYTQ*
Ga0163111_122080601	3300012954	Surface Seawater	SITYLKVIKVPTKITPQQAAIAEKIPVLINVVFLLIILLRIFIFDRFIYIPQYTH*
Ga0163111_122495451	3300012954	Surface Seawater	KNKKLKFSFYLKVTKVPIKITPQQAAIAEKITVLIKVVFLVEIFWRNFIFERCIYILQYTQ*
Ga0163111_124195971	3300012954	Surface Seawater	LKVIKVPNKITPQQAAIAEKIPVLINVVFLLVILLKIFIFERCIYIPQYTHWKNCQIII*
Ga0163111_124929842	3300012954	Surface Seawater	LVKKLPSNNKKLLSITYLKVIKVPTKITPQQAAIAEKIPVLINVVFLLIILLRIFIFERCIYIPQYTH*
Ga0163111_125653281	3300012954	Surface Seawater	LLVKKLPSNNKKLLSITYLKVIKVPTKITPQQAAIAEKIPVLINVVFLLVNLLKIFIFERCIYIPQYTHCKNCQIII*
Ga0171647_11116363	3300013113	Marine	YLKVTKVPIKITLQQAAIAEKIPVLIKVDFLVEIFCRNFIFDRCIYILQYTQ*
Ga0181404_10337161	3300017717	Seawater	SNNKKLLSITYLKVIKVPTKITPQQAAIAEKIPVLINVVFLLVILLRIFIFEKCIYILEYTH
Ga0181396_10685011	3300017729	Seawater	KRLPSNNKKTLSITYLKVIKVPTKITPQQAAIAEKIPVLIKVVFLLVILLRIFIFERCI
Ga0181426_11031702	3300017733	Seawater	LVKKHPSNNKKLLSITYLKVIKVPTKITPQQAAIAEKIPVLINVVFLLVILFKIFIFERCIYISPYTH
Ga0181409_12018911	3300017758	Seawater	HLIIKTLNTTYLKVIKVPTKITPQQATIAEKIPVFINVVFLLVILFMIFIFEECIFIPQYTQC
Ga0181414_11596431	3300017759	Seawater	KLGLLVKKLPSNNKKLFNITYLKVIKVPTKITPQQAAIAEKIPVLINVVFLLVILLRIFIFEKCIYILEYTH
Ga0181406_11116311	3300017767	Seawater	VPTKITPQQAAIAEKIPVLIKVVFLLVILLSIFIFERCIYILEYTQYKNCQIII
Ga0181425_10520623	3300017771	Seawater	FLTYLKVIKVPTNITPQQAAMAEKIPVLIKVVFLLVILFRIFIFEKCIYILQYTQLKNCQIII
Ga0181395_11402282	3300017779	Seawater	LVKRHPFKIQKTLNIAYLKVIKVPTKITPQQATIAEKIPVLIKVVFLLVILLRIFIFERCICIPQYTRYKNCQIII
Ga0181423_13453051	3300017781	Seawater	TFIKAYLKLIKVPIKITPQQAAIAEKIPVLIKVALLSVIFLGIFIFERCIYISEYTQ
Ga0181380_10788072	3300017782	Seawater	LVKRHPFKISKTLSITYLKVIKVPTKITPQHAAIAEKIPVLIKVVFLLVILLRIFIFERCIYI
Ga0181424_100525662	3300017786	Seawater	LVKRHPFKILKTLSITYLKVIKVPTNITPQHAAIAEKIPVLIKVVFLLEILLRIFIFERCIYILQYTQCKNCQIII
Ga0181607_105562071	3300017950	Salt Marsh	MTYLKVIKVPTKITPQQAAIAEKIPVLIKVVFLLVILLRIFIFERCIYISQYTY
Ga0181600_102004712	3300018036	Salt Marsh	LKFIKVPNNITPQQAAIAEKIPVLIKVVFLLVILLRIFIFEKCIYIPQYTQ
Ga0181596_100995261	3300020177	Salt Marsh	AYLKVIKVPIKITPQQANIAEKIPVLMKVIFLLVILLRIFIFDRCIYIPQYT
Ga0211533_10547661	3300020265	Marine	NIIYLKVRKVPTKITPQQAAIAEKIPVLIKVVLLLFIFWKIFVFERCIYISEYTQGKNCQTIITSNSNFFI
Ga0211658_11189451	3300020274	Marine	NKKTLNITYLKVIKVPTKITPQHTAIVDKIPVLIKVVFLLVILLRIFIFERCIYISQYTH
Ga0211522_10458041	3300020314	Marine	LSITYLKVIKVPSKITPQQAAIAEKIPVFIKVVFLLVILFKIFIFERCIYIPQYTH
Ga0211507_10504822	3300020325	Marine	LKFIKVPNNITPQQAAIAEKIPVLIKVVFLFAILLRIFKFERCIYIPQYTQWKNCQIII
Ga0211593_11346501	3300020334	Marine	KKNKNFYMIYLKVIKVPIKITLQQAAIAEKIPVLINVDFFSVILRGIFIFGKFIYISQYTQYKNCQTIIEFK
Ga0211592_10380641	3300020341	Marine	TPQQTTIAEKIPVLIKVVFLVFNLLRILILEIRIYISEYTHLRNCQTNIR
Ga0211600_10976011	3300020348	Marine	KNFHLIIKTLNITYLKVIKVPTKITPQHAAIAEKIPVLIKVDFLLAMLFRIFKFERRIQIPEYTQ
Ga0211677_104254531	3300020385	Marine	KTLSITYLKVIKVPTKITLQQAAIAEKIPVLIKVDFLLVILLRIFIFERCIYILQYTQFKNCQIII
Ga0211678_101529952	3300020388	Marine	LVKKHPSKNLKTLSLTYLKVIKVPSKIIPQQAAIAEKIPVFKKVVFLLEILLRIFIFKRCIYIPQYTQ
Ga0211678_102157841	3300020388	Marine	NIKTLIITYLKDIKVPTKITPQQATIAEKIPVLIKVVLLLFILFRIFIFERRIYIPQYTQ
Ga0211678_102466541	3300020388	Marine	LVKKHPSKNKKLKFLFYLKVTKVPIMITPQQAAIAEKIPVLIKVVFLLEIFCRIFIFERCIYIPQYTQ
Ga0211678_103053853	3300020388	Marine	LSITYLKVIKVPTKITPQQAAIAEKIPVLIKVVFLSVILLRIFIFERCIYNPQYTQWLNCQIII
Ga0211618_100709802	3300020393	Marine	LVKKLPSKKNKNFYMFYLKVIKVPIKITLQQAAIAEKIPVLIKVDLFSVIFWGIFIFGKIIYNSNYTQSKNCQTIIEIK
Ga0211497_101461262	3300020394	Marine	MFYLKVIKVPIKITLQQAAIAEKIPVLIKVDLFSVIFWGIFNFGKFIYISNYTQGKNCQTIIEFK
Ga0211583_100327542	3300020397	Marine	MFYLKVIKVPIKITLQQAAIAEKIPVLIKVDLFSVIFWGIFIFGKFIYSSNYTQGKNCQTIIEFK
Ga0211499_100256023	3300020402	Marine	MFYLKVIKVPIKITLQQAAIAEKIPVLIKVDLFSVIFWGIFIFGKFIYISNYTQSKNCQTIIEFK
Ga0211659_101028503	3300020404	Marine	HLIIKIFSETYLKVIKVPNKITPQQAAIAEKIPVLIKVVFLLFILLRIFIFERCILISQY
Ga0211516_103269983	3300020413	Marine	SNNKNLTINYLKVIKVPTIMTPQQAAIAEKIPVLIKVDFLLVILFKIFKFERCIQLIEYT
Ga0211523_101542153	3300020414	Marine	NIKILIKTYLKDIKVPIKITPQQATIAEKIPVLIKVVFLLIILFKIFIFERCIYIPHTPSVKIVKL
Ga0211523_102540853	3300020414	Marine	SITYLKVIKVPTKIKPQQAAIAEKIPVLIKVVFLLVIFLRIFIFERCIYIPQYTQWKNCQIII
Ga0211523_102708813	3300020414	Marine	TKITLQQVNIAEKIPVLIMTDFLLLNFERIFIFERCIYISEYTWCKNCQTIIEQKNIFFD
Ga0211644_103415092	3300020416	Marine	KTLSITYLKVIKVPTKITPQQAAIAEKIPVLIKVVFLLVILLRIFIFERCIYILQYT
Ga0211557_104138501	3300020418	Marine	ITYLKVKKVPTNITPQQATIAEKIPVLIKVVFLFVIFCRIFMFERCIYISQ
Ga0211512_105282682	3300020419	Marine	LVKRHPSKYKTLIITYLKDIKVPTKITPQQATIAEKIPVLIKVVFLLVILFKIFIFERCIYIPQYT
Ga0211620_100638133	3300020424	Marine	LVKKLPSKKNKNFYMFYLKVIKVPIKITLQQAAIAEKIPVLIKVDLFSVIFWGIFIFGKFICISNYTQSKNCQTIIEFK
Ga0211556_103051842	3300020432	Marine	MFYLKVIKVPIKITLQQAAIAEKIPVLIKVDLFSVIFWGIFIFGKFIYISNYTQGKNCQTIIEFK
Ga0211539_101501413	3300020437	Marine	YLKVRKVPTKITPQQATIAEKIPVLIKVVLLLFIFWKIFIFVRCILISEYTWWKNCQTII
Ga0211576_102703111	3300020438	Marine	FKLLKTLSITYLKVIKVPTKITPQQAAIAEKIPVLIKVVFLLVILLRIFIFERCIYILQYTQW
Ga0211695_100546091	3300020441	Marine	KTLNIAYLKVIKVPIKITPQQATIAEKIPVLIKVVFLFIILFKIFIFERCIYIPQYT
Ga0211574_103199091	3300020446	Marine	NIKLLNITYLKVKKVPTKITPQQAAIAEKIPVLINVVFLLIILLRIFIFERRIYISQYTH
Ga0211574_103599351	3300020446	Marine	FKINYLKVIKVPTKITPQQAAIAEKIPVLINVVFLLVILVRIFIFERCIYILQYTQ
Ga0211638_103447012	3300020448	Marine	LVKKLPSNIKTLTINYLKVIKVPTIMKPQQAAIAEKIPVLIKDDFLLVILFKIFKFERYI
Ga0211638_106208372	3300020448	Marine	MIYLKVIKVPIKITLQQAAIAEKIPVLINVDFFSAIFWEIFIFGKFIYISNYTQVKNCQTIIQFK
Ga0211642_104645061	3300020449	Marine	ELLVKKHPSKNKKLKFLFYLKVTKVPIMITPQQAAIAEKIPVLIKVVFLLEIFCRIFIFERCIYIPQYTQ
Ga0211550_101252903	3300020453	Marine	KITYLKVKKVPTNITPQQAIIAEKIPVLIKVVLLFISFCRIFMFESCIRIFQ
Ga0211548_103437371	3300020454	Marine	KKTLSITYLKVIKVPTKITPQQAAIAEKIPVLINVVFLLVILFRIFIFERCIYIPQYTH
Ga0211664_102857003	3300020455	Marine	YLKVRKVPTKITPQQAAIAEKIPVLIKVVFLLVILLRIFIFERCILISEYT
Ga0211551_103996402	3300020456	Marine	LVKKHPFKIQKTLSITYLKVIKVPTKITPQQAAIAEKIPVLIKVDFLLIILLRIFIFKRRIYIPQYTQCKNCQIII
Ga0211643_106303402	3300020457	Marine	IAYLKVIKVPTNITPQQAAIAEKIPVLINVVFLLLILLKIFIFKKCIYIPQYTQLKNCQIIN
Ga0211676_102295381	3300020463	Marine	VIKVPTKITPQQAAIAEKIPVLINVVFLLVILLRIFIFEKCIYILEYTH
Ga0211475_104610631	3300020468	Marine	KKLPSNIKTLTINYLKVIKVPTIMTPQQAAIAEKIPVLIKVDFLLVILFKIFKFERCIQLIEYTQ
Ga0211577_102125221	3300020469	Marine	SITYLKVIKVPTKITPQQAAIADKIPVLINFVFLLVILLKIFIFERCIYNPHYTH
Ga0211577_107858992	3300020469	Marine	LSITYLKVIKVPTKITPQHAAIAEKIPVLIKVVFLLVILLRIFIFERCIYILQYTQCKNCQIIN
Ga0211614_103901312	3300020471	Marine	MFYLKVIKVPIKITLQQAAIAEKIPVLIKVDLFSVIFWGIFIFGKFICIS
Ga0209992_102706973	3300024344	Deep Subsurface	KKLPSNNKKLLSNIYLKVTKVPTNITPQQATIAEKIPVFINVVFLLVIFCRIFIFERCIYILEYTYCKICQIII
Ga0209305_10590093	3300025712	Pelagic Marine	LVKKLPSNNKNFKNITYLKVIKVPTKITPQQAAIAEKIPVLIKVVFLLEILLRIFIFERLIYIPQYTQLKNCQIII
Ga0209631_101327083	3300025890	Pelagic Marine	LVKKHPFKIQKTISITYLKVIKVPTKITPQQVAIAEKIPVLIKVVFLLVILLRIFIFERCIFIL
Ga0208390_10282062	3300026081	Marine	MFYLKVIKVPIKITLQQAAIAEKIPVLIKVDLFSVIFWGIFIFEKFIYISNYTQSKNCQTIIEFK
Ga0208878_10522001	3300026083	Marine	MGKKTSIKNKNYKKIIYLKVRKVPTKITPQQATIAEKIPVLINVVLLLFIFWKIFIFERCICISEYTQ
Ga0209503_102549752	3300027859	Marine	LVKKLPSNNKKLLSITYLKVIKVPTKITPQQAAIAEKIPVLINVVFLLIILLRIFIFERCIYIPQYTH
Ga0209503_102876462	3300027859	Marine	LVKKHPSKNKKLKFLFYLKVTKVPIMITPQQAAIAEKIPVLIKVVFLIEIFCRIFIFERCIYIPQYTQ
Ga0315328_101410693	3300031757	Seawater	TLSITYLKVIKVPTKITPQQAAIAEKIPVLIKVIFLFVSFSRIFIFERCIYISQYTQWKNCQTII
Ga0315332_104223412	3300031773	Seawater	LVKRHPFKIQKTLSITYLKVIKVPTKITPQQAAIAEKIPVFINVVFLLVILLRIFIFEVNIYILQYTQYKNCQIII
Ga0310343_115412081	3300031785	Seawater	IKNKNYKKIIYLKVRKVPTKITPQQATIAEKIPVLINVVLLLFIFWKIFIFERCICISEYTQ
Ga0315316_109622753	3300032011	Seawater	AYLKLIKVPIKITPQQAAIAEKIPVLIKVALLSVIFLGIFIFERCIYISEYTR
Ga0315315_100841504	3300032073	Seawater	KRHPFKIQKTLSITYLKVIKVPTKITLQQAAIAEKIPVLIKVVFLLVILLRIFIFERCIYILQYTQR
Ga0315315_102162403	3300032073	Seawater	LVKKLPSNNKKLLSIAYLKVIKVPTKITPQQAAIAEKIPVLINVVFLLIILLKIFIFERCIYILQYTR
Ga0315315_106513342	3300032073	Seawater	LVKRHPFKIQKTLSITYLKVIKVPTKITPQQAAIAEKIPVLINVVFLLVILLSIFIFERCIYILEYTQYKNCQIII
Ga0315315_107587732	3300032073	Seawater	LVKRHPFKISKTLNITYLKVIKVPTKITPQHAAIAEKIPVLIKVVFLLVILLRIFIFERCIYILQYTQCKNCQIIN
Ga0315315_110510232	3300032073	Seawater	LVRKHPFKKQKTLSITYLKVIKVPTKITPQQAAIAEKIPVLIKVVFLLVILFRIFIFDRCIYYPQYT

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F085802

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences