Metagenome / Metatranscriptome Family F085790

Basic Information
Family ID	F085790
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	38 residues
Representative Sequence	PNPPLNSDPACIAFRSLSAFRFLGFAHRLGAGGAG
Number of Associated Samples	72
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	18.02 %
% of genes near scaffold ends (potentially truncated)	75.68 %
% of genes from short scaffolds (< 2000 bps)	73.87 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Most Common Taxonomy
Group	Bacteria (78.378 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen (34.234 % of family members)
Environment Ontology (ENVO)	Unclassified (25.225 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (37.838 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.51% β-sheet: 0.00% Coil/Unstructured: 63.49%
Feature Viewer

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Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF08818	DUF1801	2.75
PF04365	BrnT_toxin	1.83
PF14384	BrnA_antitoxin	1.83
PF08695	Coa1	1.83
PF06271	RDD	0.92
PF09832	DUF2059	0.92
PF13671	AAA_33	0.92
PF14317	YcxB	0.92
PF06580	His_kinase	0.92
PF02493	MORN	0.92
PF02796	HTH_7	0.92
PF08592	Anthrone_oxy	0.92
PF10387	DUF2442	0.92
PF06940	DUF1287	0.92
PF12850	Metallophos_2	0.92
PF07883	Cupin_2	0.92
PF07166	DUF1398	0.92
PF13577	SnoaL_4	0.92
PF00565	SNase	0.92
PF12441	CopG_antitoxin	0.92
PF01844	HNH	0.92
PF03050	DDE_Tnp_IS66	0.92
PF00072	Response_reg	0.92
PF04657	DMT_YdcZ	0.92
PF08401	ArdcN	0.92
PF10077	DUF2314	0.92
PF05016	ParE_toxin	0.92
PF00583	Acetyltransf_1	0.92
PF01845	CcdB	0.92
PF00903	Glyoxalase	0.92
PF13714	PEP_mutase	0.92
PF14659	Phage_int_SAM_3	0.92
PF03544	TonB_C	0.92
PF02278	Lyase_8	0.92
PF04191	PEMT	0.92
PF04072	LCM	0.92
PF01694	Rhomboid	0.92
PF15428	Imm26	0.92
PF01936	NYN	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	2.75
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	2.75
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	2.75
COG2929	Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin system	Defense mechanisms [V]	1.83
COG3315	O-Methyltransferase involved in polyketide biosynthesis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.92
COG5562	Prophage-encoded protein YbcV, DUF1398 family	Mobilome: prophages, transposons [X]	0.92
COG4642	Uncharacterized conserved protein	Function unknown [S]	0.92
COG4227	Antirestriction protein ArdC	Replication, recombination and repair [L]	0.92
COG3738	Uncharacterized conserved protein YijF, DUF1287 family	Function unknown [S]	0.92
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.92
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	0.92
COG3275	Sensor histidine kinase, LytS/YehU family	Signal transduction mechanisms [T]	0.92
COG3238	Uncharacterized membrane protein YdcZ, DUF606 family	Function unknown [S]	0.92
COG2972	Sensor histidine kinase YesM	Signal transduction mechanisms [T]	0.92
COG2849	Antitoxin component YwqK of the YwqJK toxin-antitoxin module	Defense mechanisms [V]	0.92
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	0.92
COG1432	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	General function prediction only [R]	0.92
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.28 %
Unclassified	root	N/A	20.72 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.28 %
Unclassified	root	N/A	20.72 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.38 %
Unclassified	root	N/A	20.72 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	35.14 %
Unclassified	root	N/A	20.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	14.41 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.90 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.90 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.90 %

Name	Rank	Taxonomy	Distribution
Holophagae	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae	34.23 %
Unclassified	root	N/A	20.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.60 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.70 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.90 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.90 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	0.90 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.90 %

Name	Rank	Taxonomy	Distribution
Holophagales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales	34.23 %
Unclassified	root	N/A	20.72 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1.80 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.80 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.90 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.90 %
Ciliophora	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	0.90 %
Gammaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis	0.90 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.90 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.90 %
Neisseriales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	0.90 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.90 %

Name	Rank	Taxonomy	Distribution
Holophagaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae	34.23 %
Unclassified	root	N/A	20.72 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	1.80 %
Neisseriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Neisseriaceae	0.90 %
Candidatus Competibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae	0.90 %
Alphaproteobacteria bacterium RIFOXYD12_FULL_60_8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium RIFOXYD12_FULL_60_8	0.90 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.90 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.90 %
Alteromonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae	0.90 %
Intramacronucleata	subphylum	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	0.90 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.90 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.90 %

Name	Rank	Taxonomy	Distribution
Geothrix	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix	32.43 %
Unclassified	root	N/A	20.72 %
Bowmanella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Bowmanella	0.90 %
unclassified Nitrospiraceae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae	0.90 %
Chitinolyticbacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Neisseriaceae → Chitinolyticbacter	0.90 %
unclassified Candidatus Competibacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → unclassified Candidatus Competibacteraceae	0.90 %
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	0.90 %
Holophaga	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Holophaga	0.90 %
Polaromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas	0.90 %
Oligohymenophorea	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	0.90 %
Alphaproteobacteria bacterium RIFOXYD12_FULL_60_8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium RIFOXYD12_FULL_60_8	0.90 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.90 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
unclassified Geothrix	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix	26.13 %
Unclassified	root	N/A	20.72 %
Chitinolyticbacter meiyuanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Neisseriaceae → Chitinolyticbacter → Chitinolyticbacter meiyuanensis	0.90 %
Bowmanella dokdonensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Bowmanella → Bowmanella dokdonensis	0.90 %
Nitrospiraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	0.90 %
Candidatus Competibacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → unclassified Candidatus Competibacteraceae → Candidatus Competibacteraceae bacterium	0.90 %
unclassified Lysobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → unclassified Lysobacter	0.90 %
unclassified Polaromonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas → unclassified Polaromonas	0.90 %
Peniculida	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea → Peniculida	0.90 %
Holophaga foetida	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Holophaga → Holophaga foetida	0.90 %
Geothrix fermentans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → Geothrix fermentans	0.90 %
Alphaproteobacteria bacterium RIFOXYD12_FULL_60_8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium RIFOXYD12_FULL_60_8	0.90 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.90 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Geothrix sp. SG10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG10	25.23 %
Unclassified	root	N/A	20.72 %
Polaromonas sp. A23	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas → unclassified Polaromonas → Polaromonas sp. A23	0.90 %
Lysobacter sp. M15	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → unclassified Lysobacter → Lysobacter sp. M15	0.90 %
Geothrix sp. SG195	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG195	0.90 %
Parameciidae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea → Peniculida → Parameciidae	0.90 %
Chitinolyticbacter meiyuanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Neisseriaceae → Chitinolyticbacter → Chitinolyticbacter meiyuanensis	0.90 %
Bowmanella dokdonensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Bowmanella → Bowmanella dokdonensis	0.90 %
Nitrospiraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	0.90 %
Candidatus Competibacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → unclassified Candidatus Competibacteraceae → Candidatus Competibacteraceae bacterium	0.90 %
Holophaga foetida	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Holophaga → Holophaga foetida	0.90 %
Geothrix fermentans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → Geothrix fermentans	0.90 %
Alphaproteobacteria bacterium RIFOXYD12_FULL_60_8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium RIFOXYD12_FULL_60_8	0.90 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.90 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Geothrix sp. SG10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG10	25.23 %
Unclassified	root	N/A	20.72 %
Paramecium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea → Peniculida → Parameciidae → Paramecium	0.90 %
Polaromonas sp. A23	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas → unclassified Polaromonas → Polaromonas sp. A23	0.90 %
Lysobacter sp. M15	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → unclassified Lysobacter → Lysobacter sp. M15	0.90 %
Geothrix sp. SG195	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG195	0.90 %
Chitinolyticbacter meiyuanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Neisseriaceae → Chitinolyticbacter → Chitinolyticbacter meiyuanensis	0.90 %
Bowmanella dokdonensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Bowmanella → Bowmanella dokdonensis	0.90 %
Nitrospiraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	0.90 %
Candidatus Competibacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → unclassified Candidatus Competibacteraceae → Candidatus Competibacteraceae bacterium	0.90 %
Holophaga foetida	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Holophaga → Holophaga foetida	0.90 %
Geothrix fermentans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → Geothrix fermentans	0.90 %
Alphaproteobacteria bacterium RIFOXYD12_FULL_60_8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium RIFOXYD12_FULL_60_8	0.90 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.90 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000203\|TB18AUG2009E_c002485	All Organisms → cellular organisms → Bacteria	2982	Open in IMG/M
3300000439\|TBL_comb48_EPIDRAFT_1010950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → unclassified Lysobacter → Lysobacter sp. M15	4884	Open in IMG/M
3300003852\|Ga0031655_10118317	All Organisms → cellular organisms → Bacteria	1053	Open in IMG/M
3300003887\|Ga0062443_1075623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → unclassified Candidatus Competibacteraceae → Candidatus Competibacteraceae bacterium	1571	Open in IMG/M
3300003888\|Ga0062442_1002988	All Organisms → cellular organisms → Bacteria	9543	Open in IMG/M
3300003888\|Ga0062442_1006455	Not Available	10327	Open in IMG/M
3300003888\|Ga0062442_1008533	All Organisms → cellular organisms → Bacteria	6904	Open in IMG/M
3300003888\|Ga0062442_1008533	All Organisms → cellular organisms → Bacteria	6904	Open in IMG/M
3300003888\|Ga0062442_1011422	All Organisms → cellular organisms → Bacteria → Proteobacteria	3309	Open in IMG/M
3300003888\|Ga0062442_1032855	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG10	728	Open in IMG/M
3300003888\|Ga0062442_1080039	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG10	524	Open in IMG/M
3300005261\|Ga0071345_1013351	All Organisms → cellular organisms → Bacteria	11564	Open in IMG/M
3300005261\|Ga0071345_1013536	All Organisms → cellular organisms → Bacteria	3161	Open in IMG/M
3300005263\|Ga0071346_1013123	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix	568	Open in IMG/M
3300006109\|Ga0007870_1021957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium RIFOXYD12_FULL_60_8	1272	Open in IMG/M
3300006354\|Ga0075021_10845432	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG10	593	Open in IMG/M
3300006354\|Ga0075021_11069493	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG10	527	Open in IMG/M
3300006642\|Ga0075521_10150681	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG10	1090	Open in IMG/M
3300007959\|Ga0079306_1186552	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG10	525	Open in IMG/M
3300009032\|Ga0105048_10907515	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	770	Open in IMG/M
3300009175\|Ga0073936_10313283	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG10	1011	Open in IMG/M
3300011442\|Ga0137437_1184066	Not Available	724	Open in IMG/M
3300012228\|Ga0137459_1193624	Not Available	595	Open in IMG/M
3300014496\|Ga0182011_10888792	Not Available	555	Open in IMG/M
3300014498\|Ga0182019_10172723	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG10	1383	Open in IMG/M
3300014498\|Ga0182019_10248901	All Organisms → cellular organisms → Bacteria	1168	Open in IMG/M
3300014502\|Ga0182021_10236583	All Organisms → cellular organisms → Bacteria	2139	Open in IMG/M
3300014502\|Ga0182021_13615670	Not Available	514	Open in IMG/M
3300016422\|Ga0182039_10537598	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG10	1014	Open in IMG/M
3300016682\|Ga0180044_1017617	Not Available	1658	Open in IMG/M
3300019788\|Ga0182028_1369239	Not Available	4883	Open in IMG/M
3300020680\|Ga0214215_101395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Bowmanella → Bowmanella dokdonensis	2437	Open in IMG/M
3300020681\|Ga0214253_100508	All Organisms → cellular organisms → Bacteria	8755	Open in IMG/M
3300020689\|Ga0214210_1007425	Not Available	1076	Open in IMG/M
3300020700\|Ga0214225_1000392	All Organisms → cellular organisms → Bacteria	10373	Open in IMG/M
3300020708\|Ga0214228_1004982	All Organisms → cellular organisms → Bacteria → Proteobacteria	1437	Open in IMG/M
3300020712\|Ga0214255_1013197	Not Available	1078	Open in IMG/M
3300020719\|Ga0214257_1000679	All Organisms → cellular organisms → Bacteria	9090	Open in IMG/M
3300021069\|Ga0194062_1112622	Not Available	815	Open in IMG/M
3300021072\|Ga0194057_10024672	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix	2387	Open in IMG/M
3300021126\|Ga0214187_1007841	Not Available	1375	Open in IMG/M
3300021137\|Ga0214165_1036129	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1137	Open in IMG/M
3300021354\|Ga0194047_10328097	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG10	581	Open in IMG/M
3300021520\|Ga0194053_10041052	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix	2071	Open in IMG/M
3300023075\|Ga0224520_1020402	All Organisms → cellular organisms → Bacteria	1617	Open in IMG/M
3300023075\|Ga0224520_1080951	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG10	728	Open in IMG/M
3300023254\|Ga0224524_1023496	All Organisms → cellular organisms → Bacteria	1257	Open in IMG/M
3300024233\|Ga0224521_1055079	Not Available	882	Open in IMG/M
3300024233\|Ga0224521_1106502	Not Available	602	Open in IMG/M
3300025366\|Ga0208505_1004791	All Organisms → cellular organisms → Bacteria	2117	Open in IMG/M
3300027265\|Ga0208789_1001267	All Organisms → cellular organisms → Bacteria → Proteobacteria	15132	Open in IMG/M
3300027894\|Ga0209068_10945369	Not Available	511	Open in IMG/M
3300028069\|Ga0255358_1000943	Not Available	3695	Open in IMG/M
3300028069\|Ga0255358_1000943	Not Available	3695	Open in IMG/M
3300028736\|Ga0302214_1021089	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300028857\|Ga0302289_1059756	All Organisms → cellular organisms → Bacteria → Proteobacteria	891	Open in IMG/M
3300028868\|Ga0302163_10126678	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG10	668	Open in IMG/M
3300029987\|Ga0311334_11401314	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG10	590	Open in IMG/M
3300029990\|Ga0311336_10531345	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG10	999	Open in IMG/M
3300030000\|Ga0311337_10051796	All Organisms → cellular organisms → Bacteria	3192	Open in IMG/M
3300030000\|Ga0311337_11456326	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG10	600	Open in IMG/M
3300030002\|Ga0311350_10032100	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix	4573	Open in IMG/M
3300030002\|Ga0311350_10628982	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300030003\|Ga0302172_10159678	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300030048\|Ga0302273_1233868	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300030294\|Ga0311349_10871368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	847	Open in IMG/M
3300030339\|Ga0311360_11231321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Neisseriaceae → Chitinolyticbacter → Chitinolyticbacter meiyuanensis	588	Open in IMG/M
3300030339\|Ga0311360_11482563	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300030838\|Ga0311335_10627696	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG10	753	Open in IMG/M
3300030838\|Ga0311335_10657657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	735	Open in IMG/M
3300030943\|Ga0311366_10505796	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG10	1051	Open in IMG/M
3300030943\|Ga0311366_11694406	Not Available	540	Open in IMG/M
3300031232\|Ga0302323_100066239	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix	3376	Open in IMG/M
3300031232\|Ga0302323_100239294	All Organisms → cellular organisms → Bacteria	1854	Open in IMG/M
3300031232\|Ga0302323_101841564	Not Available	686	Open in IMG/M
3300031232\|Ga0302323_102787311	Not Available	558	Open in IMG/M
3300031238\|Ga0265332_10138049	Not Available	1022	Open in IMG/M
3300031251\|Ga0265327_10039117	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Holophaga → Holophaga foetida	2579	Open in IMG/M
3300031521\|Ga0311364_10643728	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300031521\|Ga0311364_11651654	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	632	Open in IMG/M
3300031521\|Ga0311364_12009166	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300031521\|Ga0311364_12129839	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG10	549	Open in IMG/M
3300031521\|Ga0311364_12358900	Not Available	519	Open in IMG/M
3300031669\|Ga0307375_10821710	All Organisms → cellular organisms → Bacteria → Proteobacteria	523	Open in IMG/M
3300031681\|Ga0318572_10329364	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300031681\|Ga0318572_10396488	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG10	820	Open in IMG/M
3300031681\|Ga0318572_10573540	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG195	672	Open in IMG/M
3300031726\|Ga0302321_100183179	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG10	2178	Open in IMG/M
3300031726\|Ga0302321_100565977	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae	1262	Open in IMG/M
3300031726\|Ga0302321_100835844	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG10	1040	Open in IMG/M
3300031726\|Ga0302321_101099833	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300031726\|Ga0302321_103165500	Not Available	536	Open in IMG/M
3300031726\|Ga0302321_103485985	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300031726\|Ga0302321_103639764	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG10	501	Open in IMG/M
3300031819\|Ga0318568_10805453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas → unclassified Polaromonas → Polaromonas sp. A23	583	Open in IMG/M
3300031821\|Ga0318567_10066652	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG10	1895	Open in IMG/M
(restricted) 3300031825\|Ga0255338_1114599	All Organisms → cellular organisms → Bacteria → Proteobacteria	877	Open in IMG/M
3300031902\|Ga0302322_100063404	All Organisms → cellular organisms → Bacteria → Proteobacteria	3724	Open in IMG/M
3300031902\|Ga0302322_101055030	All Organisms → cellular organisms → Bacteria → Proteobacteria	981	Open in IMG/M
3300031902\|Ga0302322_101361764	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300031902\|Ga0302322_102312438	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300031902\|Ga0302322_103065163	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → Geothrix fermentans	574	Open in IMG/M
3300031902\|Ga0302322_103807080	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG10	515	Open in IMG/M
3300031918\|Ga0311367_11682840	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG10	619	Open in IMG/M
3300032275\|Ga0315270_10014081	All Organisms → cellular organisms → Bacteria	4303	Open in IMG/M
3300032668\|Ga0316230_1051836	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG10	1807	Open in IMG/M
3300032675\|Ga0316225_1036655	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea → Peniculida → Parameciidae → Paramecium	1946	Open in IMG/M
3300033408\|Ga0316605_10003733	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix	8618	Open in IMG/M
3300033408\|Ga0316605_12126336	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG10	546	Open in IMG/M
3300033821\|Ga0334818_019200	Not Available	910	Open in IMG/M
3300034080\|Ga0373897_028044	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG10	1013	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.30%
Host-Associated	Host-Associated	1.80%
Engineered	Engineered	0.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.26%
Aquatic	Environmental → Aquatic	36.04%
Plants	Host-Associated → Plants	1.80%
Bioremediation	Engineered → Bioremediation	0.90%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	44.14%
Freshwater	Environmental → Aquatic → Freshwater	31.53%
Soil	Environmental → Terrestrial → Soil	15.32%
Sediment	Environmental → Aquatic → Sediment	4.50%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.80%
Metal	Engineered → Bioremediation → Metal	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	44.14%
Lentic	Environmental → Aquatic → Freshwater → Lentic	14.41%
Sediment	Environmental → Aquatic → Freshwater → Sediment	9.91%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.21%
Lake	Environmental → Aquatic → Freshwater → Lake	6.31%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	6.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.50%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.80%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.80%
Ice	Environmental → Aquatic → Freshwater → Ice	0.90%
Sand	Environmental → Terrestrial → Soil → Sand	0.90%
Clay	Environmental → Terrestrial → Soil → Clay	0.90%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	44.14%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	9.91%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	8.11%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	5.41%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.41%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.50%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	3.60%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	1.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.80%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.80%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.90%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.90%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	0.90%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.90%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.90%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.90%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	34.23%
Anaerobic Enrichment Culture	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Anaerobic Enrichment Culture	9.91%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	8.11%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	7.21%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	5.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.50%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	3.60%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	3.60%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.70%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.70%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.80%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.80%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	1.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.80%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.90%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.90%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	0.90%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.90%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	0.90%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.90%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.90%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000203	Freshwater microbial communities from Trout Bog Lake, WI - Practice 18AUG2009 epilimnion	Environmental	Open in IMG/M
3300000439	Trout Bog Lake June 7 2007 Epilimnion (Trout Bog Lake Combined Assembly 48 Epilimnion Samples, Aug 2012 Assem)	Environmental	Open in IMG/M
3300003852	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB	Environmental	Open in IMG/M
3300003887	Freshwater pond sediment microbial communities from Middleton WI, HM 5/6 enriched by Humin under anaerobic conditions -HM Sample 3	Environmental	Open in IMG/M
3300003888	Freshwater pond sediment microbial communities from Midddleton WI, HM 3/4 enriched by Glucose under anaerobic conditions -HM Sample 2	Environmental	Open in IMG/M
3300005261	Freshwater pond sediment microbial communities from Midddleton WI, HA 3/4 enriched by Glucose under anaerobic conditions -HA Sample 2	Environmental	Open in IMG/M
3300005263	Freshwater pond sediment microbial communities from Middleton WI, enriched with Humic Acid Only under anaerobic conditions - HA Sample 3	Environmental	Open in IMG/M
3300006109	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH04Jul08	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300007959	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanotroph_Enrichment_5	Environmental	Open in IMG/M
3300009032	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-05	Environmental	Open in IMG/M
3300009175	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG	Environmental	Open in IMG/M
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental	Open in IMG/M
3300012228	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT700_2	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016682	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES101 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020680	Freshwater microbial communities from Trout Bog Lake, WI - 13JUN2007 hypolimnion	Environmental	Open in IMG/M
3300020681	Freshwater microbial communities from Trout Bog Lake, WI - 21JUL2009 hypolimnion	Environmental	Open in IMG/M
3300020689	Freshwater microbial communities from Trout Bog Lake, WI - 03AUG2009 epilimnion	Environmental	Open in IMG/M
3300020700	Freshwater microbial communities from Trout Bog Lake, WI - 17SEP2007 hypolimnion	Environmental	Open in IMG/M
3300020708	Freshwater microbial communities from Trout Bog Lake, WI - 05NOV2007 hypolimnion	Environmental	Open in IMG/M
3300020712	Freshwater microbial communities from Trout Bog Lake, WI - 03AUG2009 hypolimnion	Environmental	Open in IMG/M
3300020719	Freshwater microbial communities from Trout Bog Lake, WI - 18AUG2009 hypolimnion	Environmental	Open in IMG/M
3300021069	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L224-25m	Environmental	Open in IMG/M
3300021072	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L442-15m	Environmental	Open in IMG/M
3300021126	Freshwater microbial communities from Trout Bog Lake, WI - 24JUN2008 epilimnion	Environmental	Open in IMG/M
3300021137	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 hypolimnion	Environmental	Open in IMG/M
3300021354	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L221-5m	Environmental	Open in IMG/M
3300021520	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L227-8m	Environmental	Open in IMG/M
3300023075	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T-25	Environmental	Open in IMG/M
3300023254	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T75	Environmental	Open in IMG/M
3300024233	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T0	Environmental	Open in IMG/M
3300025366	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH15Jul08 (SPAdes)	Environmental	Open in IMG/M
3300027265	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanotroph_Enrichment_5 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028069	Peat soil microbial communities from Stordalen Mire, Sweden - G.F.S.T0	Environmental	Open in IMG/M
3300028736	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N1_3	Environmental	Open in IMG/M
3300028857	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N1_2	Environmental	Open in IMG/M
3300028868	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_3	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030003	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_3	Environmental	Open in IMG/M
3300030048	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N1_3	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030339	III_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031238	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG	Host-Associated	Open in IMG/M
3300031251	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG	Host-Associated	Open in IMG/M
3300031521	III_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031669	Soil microbial communities from Risofladan, Vaasa, Finland - TR-1	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031825 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - MeOH1_35cm_T4_195	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300032668	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18025	Environmental	Open in IMG/M
3300032675	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18015	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033821	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-2-X0	Environmental	Open in IMG/M
3300034080	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A5A4.1	Engineered	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085790

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TB18AUG2009E_0024855	3300000203	Freshwater	MPNPPLNSDPARTVFRSFSSFRFLGFVQRLGAGEAA*
TBL_comb48_EPIDRAFT_10109506	3300000439	Freshwater	MTPNPSLKSDPACIAFRSLSTFRYLGSAHRLGAGVAA*
Ga0031655_101183171	3300003852	Freshwater Lake Sediment	PAKSGLTPPLNSDSACTVFRCFSSSRFLGSAHRLGADGAG*
Ga0062443_10756233	3300003887	Anaerobic Enrichment Culture	PCVNPCSPNLSLKSDPACIAFRSLSAFSYLGSARHLGAGVAA*
Ga0062442_10029882	3300003888	Anaerobic Enrichment Culture	MIDIFSHLPTRPNPALKSDPACIASRSLSSFRYLGSAHRLGAGVAA*
Ga0062442_10064556	3300003888	Anaerobic Enrichment Culture	MREPPNPRLNSDPTCIAFRSLSTFCYLGFVQRLGAGGAG*
Ga0062442_10085331	3300003888	Anaerobic Enrichment Culture	MRKSLLANLSLKSDPACIAFRSLSAFSYLGSARHLGAGVAA*
Ga0062442_10085337	3300003888	Anaerobic Enrichment Culture	MVPGLPNPPLKSDPACIALRSLSAFRYHGSAHRLGAGVAA*
Ga0062442_10114227	3300003888	Anaerobic Enrichment Culture	MEWTLAQSRLPNPPLKSDPACIAFRSLSTSRYPGSAHRLGAGVAA*
Ga0062442_10328552	3300003888	Anaerobic Enrichment Culture	VPNPALHSDPACIAFRSLSTSRFLGFARRLGAGVAGELHSLG
Ga0062442_10800393	3300003888	Anaerobic Enrichment Culture	MNHRLPNLPLNSDPACIAFRSLSASRFLGFARRLGAGGAG
Ga0071345_101335110	3300005261	Anaerobic Enrichment Culture	MKQNHDFPPAPNPPLKSDPACIAFLSLSTSRYLGSARRLGAGVAA*
Ga0071345_10135364	3300005261	Anaerobic Enrichment Culture	MQARGSNLSLKSDPACIAFRSLSSFRYHGSARRLGAGVAA*
Ga0071346_10131233	3300005263	Anaerobic Enrichment Culture	PVNRTRPNPPLKSDPACIVFRSLSASRYLGSAHRLGAGGAA*
Ga0007870_10219573	3300006109	Freshwater	LRNSLMPNLPLYPAPACITFRSISTTRFLGSARRLGAGVAG*
Ga0075021_108454321	3300006354	Watersheds	PNPPLKSDPACIAFRSLSTSRYLGFAQRLGAGVAA*
Ga0075021_110694931	3300006354	Watersheds	NYWAFVQAPNPPLKSDPACIAFRSLSTSRYLGSAHRLGAGVAA*
Ga0075521_101506811	3300006642	Arctic Peat Soil	PNPPLNSDPACIVFRSFSSFVFLGFAHRLGAGGAG*
Ga0079306_11865522	3300007959	Deep Subsurface	APNPSLKSDPACIAFRSLSMSRFLGSAQRLGAGEAG*
Ga0105048_109075151	3300009032	Freshwater	NPSLNSDPACIAFRSFSSFRYLGFVQRLGAGGAG*
Ga0073936_103132831	3300009175	Freshwater Lake Hypolimnion	PNPPLNSDPARTVSRSFSLFRFLGSAHRLGAGGAG*
Ga0137437_11840662	3300011442	Soil	GGFQREGVPNPPLKSDPACIAFRSLSVFRYLGSAHRLGAGVAA*
Ga0137459_11936242	3300012228	Soil	GGAPNPPLKSDPACIAFRSLSSFRYLGFAHRLGAGVAG*
Ga0182011_108887921	3300014496	Fen	KTLSECVKMPNPPLNSDPARTAIRSFSSSRFLGFVHRLGAGGAG*
Ga0182019_101727233	3300014498	Fen	NPPLKSDPACIAFRSLSNSRYLGSARRLGAGGAA*
Ga0182019_102489011	3300014498	Fen	PVSNAPNSPLNSDPARTTLRSFSSSRFLGFVRRLDAGGAG*
Ga0182021_102365831	3300014502	Fen	NSPLNSDPARIVFRSLSASHFLGFVHRLGAGGAG*
Ga0182021_136156702	3300014502	Fen	PNPPLSSDPARTVSRSFSSFRFLGFVQRLDVGGAG*
Ga0182039_105375981	3300016422	Soil	NPSVNPTPNLSLNPDPACIAFRSLSIFRFLGSAPRLGAGGAG
Ga0180044_10176171	3300016682	Freshwater	GPNPPLNSGPARTVFRSFSSFRFLGSAQHLGSGVAG
Ga0182028_13692391	3300019788	Fen	KKEKKIPLNSDPTCIVFLSLSASRFLRLRSPLGAGGAG
Ga0214215_1013954	3300020680	Freshwater	MLMPNPPLNSDPARTVFRSFSSFRFLVFAHRLGAGRAG
Ga0214253_1005088	3300020681	Freshwater	MPNPPLNSDPARTVFRSFSSFRFLGFVQRLGAGEAA
Ga0214210_10074254	3300020689	Freshwater	SMPNPPLNSDPARTVFRSFSSFRFLGFVQRLGAGEAA
Ga0214225_10003924	3300020700	Freshwater	MLMPNPPLNSDRARTVFRSFSSFRFLVFAHRLGAGRAG
Ga0214228_10049823	3300020708	Freshwater	TLWQGHSMPNPPLNSDPARTVFRSFSSFRFLGFVQRLGAGEAA
Ga0214255_10131973	3300020712	Freshwater	RCKVTPNPPLNSDPARTAFRSLSASRFLDSAQLLGAGGAG
Ga0214257_10006793	3300020719	Freshwater	MTPNPSLKSDPACIAFRSLSTFRYLGSAHRLGAGVAA
Ga0194062_11126223	3300021069	Anoxic Zone Freshwater	APNRVLKSDPARIAFRSLSAPGLLGSFQHLSAGGAA
Ga0194057_100246723	3300021072	Anoxic Zone Freshwater	MSAIPVMPNPPLKSDPACIASRSLSAFRYLGSVHRLGAGVAA
Ga0214187_10078411	3300021126	Freshwater	WQGHSMPNPPLNSDPARTVFRSFSSFRFLGFVQRLGAGEAA
Ga0214165_10361293	3300021137	Freshwater	MIFYRSPNPLLNADSACIAFRSLLAFLFFGFAHRLGAG
Ga0194047_103280972	3300021354	Anoxic Zone Freshwater	VAPNPQLNSDPACIDFRSLTTFVLLGFVHRLGAGGAG
Ga0194053_100410521	3300021520	Anoxic Zone Freshwater	PNPQLNSDPACIGTRSFSSFVLLGSVQRLGAGVAG
Ga0224520_10204021	3300023075	Soil	PNSPLNSDPARIVFRSLSASHFLGFVHRLGAGGAG
Ga0224520_10809511	3300023075	Soil	AVVLPPAPNPPLNSDPARTIPRSFSSFRFLGFAQRLGAGGAG
Ga0224524_10234963	3300023254	Soil	PNPPLNSDPARTIFRSLSASGFLGFVQRLGAGGAG
Ga0224521_10550791	3300024233	Soil	VLPPAPNPPLNSDPARTIPRSFSSFRFLGFAQRLGAGGAG
Ga0224521_11065021	3300024233	Soil	LPNPPLNSDPARTVFRSLSPSRFLGSAQRLGAGGAG
Ga0208505_10047912	3300025366	Freshwater	MPNLPLYPAPACITFRSISTTRFLGSARRLGAGVAA
Ga0208789_10012674	3300027265	Deep Subsurface	MAPNLPLNSDPACIVFRSFSSFVFLGSVHRLGAGGAG
Ga0209068_109453692	3300027894	Watersheds	PNLTLKSDPACIAFRSLSTSRYLGFVHRLGAGGAA
Ga0255358_10009437	3300028069	Soil	MAVDSRPNPPLKSDPACIAFRSLSNSRYLGSARRLGAGGAA
Ga0255358_10009439	3300028069	Soil	MAGDRPNPPLKSDPACIAFHSLSTSRYPGSARRLGAGVAA
Ga0302214_10210892	3300028736	Fen	MQRSNLSLKSDPACIAFRSFSSFRYLGFVQRLGAGGAG
Ga0302289_10597563	3300028857	Fen	LGALSNPALNSDPACIAFRSLSTFRYLGFVHRLGAGGAG
Ga0302163_101266782	3300028868	Fen	HQPNPPLNSDPACIAFRSLSTSRFLGFAQRLGAGGAG
Ga0311334_114013142	3300029987	Fen	MPNPPLKSDPACIAFRSLSTSRYLGSAHRLGAGVAG
Ga0311336_105313453	3300029990	Fen	PEAPNPPLNSDPACIAFRSLSTSRYLGSAQRLGAGAAG
Ga0311337_100517964	3300030000	Fen	MITLRPNPPLKSDPACIAFRSLSSFRYLGSAHRLGAGVAA
Ga0311337_114563261	3300030000	Fen	VRPNPPLNSDPARIVFRSLSSSRFLGFAHRLGAGVAG
Ga0311350_100321002	3300030002	Fen	MRPNPPLKSDPACIAFRPLSTSRYLGFAHRLGAGVAA
Ga0311350_106289823	3300030002	Fen	TKVQVSPNLSLKSDPACIAFRSLSSFRYLGFAHRLGTGAAA
Ga0302172_101596781	3300030003	Fen	NARNPTMQRSNLSLKSDPACIAFRSFSSFRYLGFVQRLGAGGAG
Ga0302273_12338682	3300030048	Bog	TMQRSNLSLKSDPACIAFRSFSSFRYLGFVQRLGAGGAG
Ga0311349_108713681	3300030294	Fen	NALPNLPLNSDPARTVFRSFSSFRFLGSVHRLGAGGAG
Ga0311360_112313211	3300030339	Bog	RLGALANPALNSDPAYIAFRSLSTSRFLGSVQRLGAGGAG
Ga0311360_114825632	3300030339	Bog	RPNLALKSDPACIAFRSLSTSRYLGSAHRLGAGGAA
Ga0311335_106276961	3300030838	Fen	VHEHPPADLQLNSDPACIAFRSLSAFRYLGSAQRLGAGGAG
Ga0311335_106576572	3300030838	Fen	SSWPNPPLNSDPACIAFRSLSTSRFLGSAQRLGAGGAG
Ga0311366_105057961	3300030943	Fen	APNLSLKSDPACIAFRSLSTFCYLGSAHRLGAGVAA
Ga0311366_116944061	3300030943	Fen	RPNPPLNSDPARIVFRSLSSSRFLGFAHRLGAGVAG
Ga0302323_1000662393	3300031232	Fen	MPNPPLNSDPACIVLRSFSSFVFLGFVRRFAAGGAG
Ga0302323_1002392941	3300031232	Fen	MITLRPNPPLKSDPACIAFRSLSSFRYLGSAHRLG
Ga0302323_1018415642	3300031232	Fen	SIVNLASNLSLTSDHARTVLHSFSSFRFLSSAQRLGAGGAG
Ga0302323_1027873111	3300031232	Fen	YAPTKPPNPPLKSDPACIAFRSLSAFRYLGSAQRLAAGVAA
Ga0265332_101380491	3300031238	Rhizosphere	GFQVPNTSLNSDPARTVFRSFSSSRFLDSARRLGAGGAG
Ga0265327_100391173	3300031251	Rhizosphere	MLVRSRGPNPPLNSDPADIAFRSFSSFRFLGFAQRLGAGVAG
Ga0311364_106437281	3300031521	Fen	NLSTMATMPNPLLKSDPAYPVFHSFSPSRFLGSARRLGAGEAG
Ga0311364_116516542	3300031521	Fen	SNLIHALPNPPLNSDPARTVFRSLSSSRFLGFVQRLDAGGAG
Ga0311364_120091662	3300031521	Fen	MPTPPLNSASACIAFRSLSSFLYLGSARCLGAGGAA
Ga0311364_121298391	3300031521	Fen	RSNSPLNSDPACIAFRSLSNSRFLGSAQRLGAGAAG
Ga0311364_123589001	3300031521	Fen	MIILPPRPNPPLNSDPAYIVFRSLSASRFLGFVHRLGAG
Ga0307375_108217102	3300031669	Soil	MVFLAHAPNPSLNSDPACVVFRSFSSFGFLGFVHRLGAGGA
Ga0318572_103293641	3300031681	Soil	PNLSLKSDPACIAFRSLSAFRYLGSAHRLGAGVAA
Ga0318572_103964881	3300031681	Soil	MYTEASFREAPNPPLKSDPACIAFRSLSIFRYLGSAHRLGAGAAA
Ga0318572_105735402	3300031681	Soil	SVPEEMPNPSLNSDPACIAFRSLSTFRYLGSALCLGAGGAG
Ga0302321_1001831793	3300031726	Fen	MTNNHRPNPALKSDPACIAFRSLSSFRYLGSVHRLGAGVAA
Ga0302321_1005659771	3300031726	Fen	DSLAGRPNPPLKSDPACIAFRSLSTSRYLGSARHLGAGVAA
Ga0302321_1008358441	3300031726	Fen	PNPPLNSDPACIAFRSLSAFRFLGFAHRLGAGGAG
Ga0302321_1010998331	3300031726	Fen	RPNLALKSDPACIAFRSLSTLRYLGSVHRLGAGVAA
Ga0302321_1031655001	3300031726	Fen	LSLPNPPLKSDPACIAFPSLSAFRYLGSAHRLGAGVAA
Ga0302321_1034859851	3300031726	Fen	PNPPLNSDPACIVFRSLSTSRFPGFVQRLGAGVAG
Ga0302321_1036397641	3300031726	Fen	MVKAFPVAPNPPLNSDPACIVFRSFSSFVFLGFVQRLGAG
Ga0318568_108054531	3300031819	Soil	PNRTLKSDPACSAFRSLSVSRYLGSAQRLGAGVAA
Ga0318567_100666521	3300031821	Soil	EVLASLPNPALNSDPACIAFRSFSSSRFLGFVYRLGAGGAG
(restricted) Ga0255338_11145992	3300031825	Sandy Soil	PNPPLNSDLACIAFRSLSVSRFLGFVQRLGAGVAG
Ga0302322_1000634042	3300031902	Fen	MESTPAPNPSLKSDPACISSRSLSLSCYLGSAHRLGAGVAA
Ga0302322_1010550303	3300031902	Fen	MDPACIVFRSLSTARFLGFVQRLGAGGAGELHSLGLSHG
Ga0302322_1013617641	3300031902	Fen	PNPSLKSDPTCIAFRSLSAFCYLGSAHRLGAGVAA
Ga0302322_1023124381	3300031902	Fen	NLSLNSDPACIAFRSVSTFTFLGFARRLGAGGAGPFQSLDRQ
Ga0302322_1030651631	3300031902	Fen	EGPNLPLKSDPACIAFRPLSSARYPGSAHRLGAGVAA
Ga0302322_1038070802	3300031902	Fen	RPNPQLNSDPACIVFRSLSASRFLGSVQRLGAGGAG
Ga0311367_116828401	3300031918	Fen	HRPNPALKSDPACIAFRSLSAFRYLGSAHRFGAGVAA
Ga0315270_100140815	3300032275	Sediment	MPNPPLKSDPACIAFRSLSSFRYPGSARRLGAGGAA
Ga0316230_10518364	3300032668	Freshwater	TPNPPLNSDPARTAFRSLSASRFLDSAQLLGAGGAG
Ga0316225_10366556	3300032675	Freshwater	PEPNPPLNSDPARIVIFPLSSSVFLGFVQLSFAGVAG
Ga0316605_100037332	3300033408	Soil	MPNLSLKSDPACIAFRSLSTSCYLGFAHRLGAGVAA
Ga0316605_121263361	3300033408	Soil	PNPSLNPDPACITFRSLSTSRFHGFVQRLGAGGSG
Ga0334818_019200_2_121	3300033821	Soil	MAEYCRVVPNLSLKSDPACIAFRSLSTFRYLGFAHRLGAG
Ga0373897_028044_3_155	3300034080	Sediment Slurry	AGILAIYFLMQSNVRPNPPLKSDPACIAFRSLSTSRYLGSARRLGAGAAA

Hidden Markov Model


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