Metagenome Family F085759

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085759
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	66 residues
Representative Sequence	MQRRLAAQDVLDKHRVSCPRCRCPEAVVLIDEQFEVTWQCVDCESRWPASDEESALLLGPSLKTIH
Number of Associated Samples	83
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	50.45 %
% of genes near scaffold ends (potentially truncated)	22.52 %
% of genes from short scaffolds (< 2000 bps)	86.49 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.694 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (20.721 % of family members)
Environment Ontology (ENVO)	Unclassified (29.730 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (40.541 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.89% β-sheet: 15.96% Coil/Unstructured: 69.15%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF00459	Inositol_P	12.61
PF07452	CHRD	5.41
PF07690	MFS_1	2.70
PF00072	Response_reg	1.80
PF03551	PadR	1.80
PF13545	HTH_Crp_2	1.80
PF01435	Peptidase_M48	1.80
PF12760	Zn_Tnp_IS1595	1.80
PF00226	DnaJ	0.90
PF13365	Trypsin_2	0.90
PF03928	HbpS-like	0.90
PF07820	TraC	0.90
PF09594	GT87	0.90
PF01148	CTP_transf_1	0.90
PF08757	CotH	0.90
PF05987	DUF898	0.90
PF03328	HpcH_HpaI	0.90
PF05726	Pirin_C	0.90
PF03098	An_peroxidase	0.90
PF13620	CarboxypepD_reg	0.90
PF14340	DUF4395	0.90
PF00149	Metallophos	0.90
PF01421	Reprolysin	0.90
PF01925	TauE	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	1.80
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.80
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	1.80
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	0.90
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.90
COG1741	Redox-sensitive bicupin YhaK, pirin superfamily	General function prediction only [R]	0.90
COG2301	Citrate lyase beta subunit	Carbohydrate transport and metabolism [G]	0.90
COG3836	2-keto-3-deoxy-L-rhamnonate aldolase RhmA	Carbohydrate transport and metabolism [G]	0.90
COG4269	Uncharacterized membrane protein YjgN, DUF898 family	Function unknown [S]	0.90
COG5337	Spore coat protein CotH	Cell wall/membrane/envelope biogenesis [M]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.69 %
Unclassified	root	N/A	6.31 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.69 %
Unclassified	root	N/A	6.31 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.69 %
Unclassified	root	N/A	6.31 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	54.05 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.21 %
Unclassified	root	N/A	6.31 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.70 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	48.65 %
Unclassified	root	N/A	6.31 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.60 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.80 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.90 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.90 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	48.65 %
Unclassified	root	N/A	6.31 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	1.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.80 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.90 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	0.90 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.90 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	48.65 %
Unclassified	root	N/A	6.31 %
Shewanellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Shewanellaceae	1.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.80 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.90 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	0.90 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.90 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	48.65 %
Unclassified	root	N/A	6.31 %
Shewanella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Shewanellaceae → Shewanella	1.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.80 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.90 %
Povalibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter	0.90 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.90 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	48.65 %
Unclassified	root	N/A	6.31 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.80 %
unclassified Luteitalea	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea	0.90 %
Povalibacter uvarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	0.90 %
Shewanella violacea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Shewanellaceae → Shewanella → Shewanella violacea	0.90 %
Shewanella colwelliana	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Shewanellaceae → Shewanella → Shewanella colwelliana	0.90 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.90 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	48.65 %
Unclassified	root	N/A	6.31 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.80 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	0.90 %
Povalibacter uvarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	0.90 %
Shewanella violacea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Shewanellaceae → Shewanella → Shewanella violacea	0.90 %
Shewanella colwelliana	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Shewanellaceae → Shewanella → Shewanella colwelliana	0.90 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.90 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_101674753	All Organisms → cellular organisms → Bacteria → Proteobacteria	786	Open in IMG/M
3300000956\|JGI10216J12902_102463018	All Organisms → cellular organisms → Bacteria	6623	Open in IMG/M
3300000956\|JGI10216J12902_103535329	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300000956\|JGI10216J12902_108678920	Not Available	1194	Open in IMG/M
3300000956\|JGI10216J12902_112818015	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1582	Open in IMG/M
3300001431\|F14TB_100416724	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300001431\|F14TB_102006829	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300003319\|soilL2_10238957	All Organisms → cellular organisms → Bacteria	1545	Open in IMG/M
3300004114\|Ga0062593_100160341	Not Available	1724	Open in IMG/M
3300004156\|Ga0062589_100321763	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1209	Open in IMG/M
3300004156\|Ga0062589_101484503	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300004157\|Ga0062590_100224623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1385	Open in IMG/M
3300004157\|Ga0062590_100452160	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300004157\|Ga0062590_100663413	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	931	Open in IMG/M
3300004463\|Ga0063356_100078804	All Organisms → cellular organisms → Bacteria → Proteobacteria	3468	Open in IMG/M
3300004463\|Ga0063356_100657580	All Organisms → cellular organisms → Bacteria	1431	Open in IMG/M
3300004463\|Ga0063356_102660651	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	769	Open in IMG/M
3300004463\|Ga0063356_106453813	All Organisms → cellular organisms → Bacteria → Proteobacteria	502	Open in IMG/M
3300004480\|Ga0062592_100329182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1174	Open in IMG/M
3300004480\|Ga0062592_102472960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Shewanellaceae → Shewanella → Shewanella colwelliana	522	Open in IMG/M
3300005093\|Ga0062594_101706407	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300005294\|Ga0065705_10991629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Shewanellaceae → Shewanella → Shewanella violacea	549	Open in IMG/M
3300005353\|Ga0070669_100806356	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	798	Open in IMG/M
3300005354\|Ga0070675_101172638	Not Available	707	Open in IMG/M
3300005459\|Ga0068867_101773929	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300005466\|Ga0070685_10570549	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	810	Open in IMG/M
3300005549\|Ga0070704_100140777	All Organisms → cellular organisms → Bacteria → Acidobacteria	1883	Open in IMG/M
3300005564\|Ga0070664_100766975	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	901	Open in IMG/M
3300005617\|Ga0068859_100795805	Not Available	1033	Open in IMG/M
3300006358\|Ga0068871_101444068	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300006894\|Ga0079215_10314612	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300006894\|Ga0079215_10751129	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300006918\|Ga0079216_10554850	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	776	Open in IMG/M
3300007004\|Ga0079218_10079008	All Organisms → cellular organisms → Bacteria	2176	Open in IMG/M
3300007004\|Ga0079218_10158476	All Organisms → cellular organisms → Bacteria	1664	Open in IMG/M
3300007004\|Ga0079218_10327893	All Organisms → cellular organisms → Bacteria	1260	Open in IMG/M
3300007004\|Ga0079218_10348805	All Organisms → cellular organisms → Bacteria	1231	Open in IMG/M
3300007004\|Ga0079218_10732190	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300009053\|Ga0105095_10276646	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	922	Open in IMG/M
3300009087\|Ga0105107_10013585	All Organisms → cellular organisms → Bacteria → Proteobacteria	5662	Open in IMG/M
3300009087\|Ga0105107_11182643	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300009147\|Ga0114129_11643415	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	785	Open in IMG/M
3300009551\|Ga0105238_11008841	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	853	Open in IMG/M
3300009609\|Ga0105347_1031040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1864	Open in IMG/M
3300009610\|Ga0105340_1039169	All Organisms → cellular organisms → Bacteria	1845	Open in IMG/M
3300010036\|Ga0126305_10071299	All Organisms → cellular organisms → Bacteria	2026	Open in IMG/M
3300010038\|Ga0126315_10458731	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	808	Open in IMG/M
3300010038\|Ga0126315_11018532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300010039\|Ga0126309_10719566	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300010403\|Ga0134123_13381034	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300011399\|Ga0137466_1040189	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300011415\|Ga0137325_1059866	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300012043\|Ga0136631_10374709	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300012530\|Ga0136635_10083674	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	998	Open in IMG/M
3300012906\|Ga0157295_10198179	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300014326\|Ga0157380_10931182	Not Available	897	Open in IMG/M
3300015077\|Ga0173483_10657330	All Organisms → cellular organisms → Bacteria → Acidobacteria	585	Open in IMG/M
3300015200\|Ga0173480_10075336	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1580	Open in IMG/M
3300015360\|Ga0163144_10303224	All Organisms → cellular organisms → Bacteria	2032	Open in IMG/M
3300015371\|Ga0132258_11688623	All Organisms → cellular organisms → Bacteria	1598	Open in IMG/M
3300015373\|Ga0132257_103225622	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300017792\|Ga0163161_10739312	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	822	Open in IMG/M
3300017965\|Ga0190266_10544995	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300018422\|Ga0190265_10212058	All Organisms → cellular organisms → Bacteria	1957	Open in IMG/M
3300018422\|Ga0190265_10349061	All Organisms → cellular organisms → Bacteria	1565	Open in IMG/M
3300018429\|Ga0190272_10758596	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	885	Open in IMG/M
3300018429\|Ga0190272_10979077	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300018429\|Ga0190272_12113207	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300018432\|Ga0190275_10030173	All Organisms → cellular organisms → Bacteria	4338	Open in IMG/M
3300018469\|Ga0190270_10021664	All Organisms → cellular organisms → Bacteria	3982	Open in IMG/M
3300018469\|Ga0190270_11785769	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300018476\|Ga0190274_10071436	All Organisms → cellular organisms → Bacteria	2624	Open in IMG/M
3300018481\|Ga0190271_12258565	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300018481\|Ga0190271_12365781	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300018920\|Ga0190273_10872837	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300019377\|Ga0190264_10497652	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	832	Open in IMG/M
3300019377\|Ga0190264_10692933	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300019767\|Ga0190267_11461763	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300020020\|Ga0193738_1011848	All Organisms → cellular organisms → Bacteria	2831	Open in IMG/M
3300020057\|Ga0163151_10496166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300020186\|Ga0163153_10048602	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2916	Open in IMG/M
3300021339\|Ga0193706_1062967	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1025	Open in IMG/M
3300025918\|Ga0207662_10193805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	1312	Open in IMG/M
3300025924\|Ga0207694_10951044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300025925\|Ga0207650_11732471	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300025926\|Ga0207659_11695279	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300025931\|Ga0207644_10525446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	978	Open in IMG/M
3300025937\|Ga0207669_10012725	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4148	Open in IMG/M
3300025945\|Ga0207679_11225534	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300025986\|Ga0207658_11310640	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300025986\|Ga0207658_11525041	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300027665\|Ga0209983_1027612	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1202	Open in IMG/M
3300027731\|Ga0209592_1149755	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	837	Open in IMG/M
3300027818\|Ga0209706_10016072	All Organisms → cellular organisms → Bacteria	3820	Open in IMG/M
3300027843\|Ga0209798_10129340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1273	Open in IMG/M
3300027886\|Ga0209486_10263586	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300027886\|Ga0209486_10996288	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300028578\|Ga0272482_10222815	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300030606\|Ga0299906_10670425	All Organisms → cellular organisms → Bacteria → Acidobacteria	780	Open in IMG/M
3300031538\|Ga0310888_10066984	Not Available	1735	Open in IMG/M
3300031720\|Ga0307469_10828914	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	851	Open in IMG/M
3300031824\|Ga0307413_10790070	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	797	Open in IMG/M
3300031854\|Ga0310904_10448582	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	855	Open in IMG/M
3300031908\|Ga0310900_10553270	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	903	Open in IMG/M
3300031908\|Ga0310900_10789184	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	767	Open in IMG/M
3300031940\|Ga0310901_10034394	All Organisms → cellular organisms → Bacteria	1571	Open in IMG/M
3300031995\|Ga0307409_102035835	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300032002\|Ga0307416_100119115	All Organisms → cellular organisms → Bacteria	2348	Open in IMG/M
3300032003\|Ga0310897_10019891	All Organisms → cellular organisms → Bacteria	2136	Open in IMG/M
3300032144\|Ga0315910_10560725	All Organisms → cellular organisms → Bacteria → Acidobacteria	884	Open in IMG/M
3300034281\|Ga0370481_0101907	Not Available	964	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	74.77%
Host-Associated	Host-Associated	25.23%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.26%
Plants	Host-Associated → Plants	25.23%
Aquatic	Environmental → Aquatic	13.51%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.32%
Freshwater	Environmental → Aquatic → Freshwater	9.91%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.01%
Sediment	Environmental → Aquatic → Sediment	3.60%
Roots	Host-Associated → Plants → Roots	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.86%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.01%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.31%
Sediment	Environmental → Aquatic → Freshwater → Sediment	4.50%
Loam	Environmental → Terrestrial → Soil → Loam	4.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.60%
Lake	Environmental → Aquatic → Freshwater → Lake	2.70%
Ice	Environmental → Aquatic → Freshwater → Ice	1.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.80%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.90%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.13%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	18.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.01%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.31%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.41%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	4.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.60%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	2.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.70%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.80%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.90%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.90%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	9.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	8.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.41%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	4.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.50%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	4.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.50%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.60%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.60%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	2.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.70%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.80%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.80%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.80%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.90%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.90%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.90%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011399	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT842_2	Environmental	Open in IMG/M
3300011415	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT469_2	Environmental	Open in IMG/M
3300012043	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ601 (22.06)	Environmental	Open in IMG/M
3300012530	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ85 (21.06)	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015360	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020020	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a1	Environmental	Open in IMG/M
3300020057	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP5.IB-2	Environmental	Open in IMG/M
3300020186	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP6.IB-1	Environmental	Open in IMG/M
3300021339	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c1	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027665	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027731	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027818	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027843	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028578	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300034281	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1016747532	3300000956	Soil	MQRRLAAQDVLDKHSVSCPRCRCPEALVLIDEQFEVTWQCVDCESRWPASDEESALLLGPSLNTIH*
JGI10216J12902_1024630188	3300000956	Soil	MQRRLAAHDVLDKHRMLCPRCRCPEAVVLIDELFEVTWQCVDCESRWPASDEESEMLLGPTLKTIH*
JGI10216J12902_1035353292	3300000956	Soil	MQRRLVVTEVLDRHRAICPRCRCPEAVVLIDAQFEVTWQCVDCESRWPASDDEAALLLGPSLKTIH*
JGI10216J12902_1086789201	3300000956	Soil	DKHSLVCPRCRCPEAVVLIDLSFEVTWQCVDCDTRWPASDEETAMLLGPSMRTIH*
JGI10216J12902_1128180152	3300000956	Soil	MQRRLAVHDVLDKHRVSCPRCRCPEAVVLIDELFEVTWQCVDCESRWPASDEESELLLGSSLKTIH*
F14TB_1004167242	3300001431	Soil	MQRRLAAHDVLDKHRVACPRCRCPEAVVLIDELFEVTWQCVDCESRWPASDEESELLLGPSSKTIH*
F14TB_1020068291	3300001431	Soil	MGKRLAVADLLDKHRVACPRCRCNEAVVVVDTKFEVVWQCVDCESRWPASDDETALLLGSALTTIH*
soilL2_102389572	3300003319	Sugarcane Root And Bulk Soil	MHRRIALSDVLDQHRVTCPRCRCTEAIVLIDTQFEVTWQCVDCESRWPASDEEAALLLGESLKTIH*
Ga0062593_1001603411	3300004114	Soil	AVADVLDKHRVACPRCRCNEAVVVVDTKFEVVWQCVDCESRWPASDDETALLLGSALTTIH*
Ga0062589_1003217632	3300004156	Soil	VGMGKRLAVADVLDKHRVACPRCRCNEAVVVVDTKFEVVWQCVDCESRWPASDDETALLLGSALTTIH*
Ga0062589_1014845031	3300004156	Soil	MEKRLSLGEVLDKYRLICPRCRCNEAIVLIDIAFEVTWQCVDCETRWPASDAERELLLGPSLKMIH*
Ga0062590_1002246232	3300004157	Soil	MDMQRRLAAHDVLDKHRVACPRCRCPEAVVLIDELFEVTWQCVDCESRWPASDEESELLLGPSLKTIH*
Ga0062590_1004521602	3300004157	Soil	MEKRIALGEVLDKYRLICPRCRCPEAIVLIDIAFEVTWQCVDCETRWPASDAERELLLGPSLKMIH*
Ga0062590_1006634132	3300004157	Soil	MAKRVALTELLDKHRVACPRCQCTEAVVVMDTKFEVVWQCVDCESRWPASDDETALLLGTAMTTIH*
Ga0063356_1000788046	3300004463	Arabidopsis Thaliana Rhizosphere	MQRRLAVHDVLDKHQACCPRCRCPEAVVLIDEQFEITWQCVDCETRWPASDEESALLLGSSLKTVH*
Ga0063356_1006575802	3300004463	Arabidopsis Thaliana Rhizosphere	MQRRLAVHEVLDKHRAYCPRCRCTEAVVLIDEQFEITWQCVDCESRWPASDEESALLLGRSLKTIH*
Ga0063356_1026606512	3300004463	Arabidopsis Thaliana Rhizosphere	MQRRLAVQEMLDKHRVSCPRCRCPEAVVLIDEQFEVTWQCVDCESRWPASDEESAILLGPSLKTIH*
Ga0063356_1064538131	3300004463	Arabidopsis Thaliana Rhizosphere	MHRRIALSDVLDQHRVTCPRCRCSEAIVLIDTQFEVTWQCVDCESRWPASDEEAALLLGESLKTIH*
Ga0062592_1003291822	3300004480	Soil	MQRRLALTEVLDKHRAICPRCRCPEAVVLIDAQFEVTWQCIDCETRWPASDDETALLLGSSLKTIH*
Ga0062592_1024729601	3300004480	Soil	MQRRLAVHDVLDKHRACCPRCRCTEAVVLIDEQFEITWQCVDCESRWPASDEESELLLGPSLKTIH*
Ga0062594_1017064072	3300005093	Soil	VGMGKRLAVADVLDKHRVACPRCQCNEAVVVVDTKFEVVWQCVDCESRWPASDDETALLLGSALTTIH*
Ga0065705_109916291	3300005294	Switchgrass Rhizosphere	MQRRLAAQDVLDKHRVCCPRCRCPEAVVLIDEQFEVTWQCVDCESRWPASDEESELLLGPALKTIH*
Ga0070669_1008063562	3300005353	Switchgrass Rhizosphere	MQRRLAAHDVLDKHRVACPRCRCPEAVVLIDELFEVTWQCVDCESRWPASDEESELLLGPSLKTIH*
Ga0070675_1011726382	3300005354	Miscanthus Rhizosphere	AHDVLDKHRVACPRCRCPEAVVLIDELFEVTWQCVDCESRWPASDEESELLLGPSLKTIH
Ga0068867_1017739291	3300005459	Miscanthus Rhizosphere	VADLLDKHRVACPRCRCNEAVVVVDTKFEVVWQCVDCESRWPASDDETALLLGSALTTIH
Ga0070685_105705492	3300005466	Switchgrass Rhizosphere	MGKRLAVADVLDKHRVACPRCQCNEAVVVVDTKFEVVWQCVDCESRWPASDDETALLLGSALTTIH*
Ga0070704_1001407771	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	GMEKRLSLGEVLDKYRLICPRCRCNEAIVLIDIAFEVTWQCVDCETRWPASDAERELLLGPSLKMIH*
Ga0070664_1007669753	3300005564	Corn Rhizosphere	MGKRLAVADVLDKHRVACPRCRCNEAVVVVDTKFEVVWQCVDCESRWPASDDETALLLGSALTTIH*
Ga0068859_1007958051	3300005617	Switchgrass Rhizosphere	GEVLDKYRLICPRCRCNEAIVLIDIAFEVTWQCVDCETRWPASDAERELLLGPSLKMIH*
Ga0068871_1014440682	3300006358	Miscanthus Rhizosphere	MGKRVAVTELLDKHRIACPRCQCTEAVVVMDTNFEVVWQCVDCESRWPASDDETALLLGSALTTIH*
Ga0079215_103146122	3300006894	Agricultural Soil	MQRRLAAHDVLDKHQVSCPRCRCPEAVVLIDEQFEVTWQCVDCESKWPASDEESQMLLGPSLKTIH*
Ga0079215_107511293	3300006894	Agricultural Soil	VRADKLYMQRRLAVHDVLDRHRVSCPRCRCPEAVVLIDEQFEVTWQCVDCESRWPASDEETAMPLGRSLKTIH*
Ga0079216_105548502	3300006918	Agricultural Soil	MQRRLAAHDVLDKHRVSCPRCRCPEAVVLIDEQFEVTWQCVDCESKWPASDEESELLLGPSLKTIH*
Ga0079218_100790084	3300007004	Agricultural Soil	MQRRLAAQDVLDKHRVCCPRCRCPEAVVLIDEQFEVTWQCVDCESRWPASDEESELLLGSSLKTIH*
Ga0079218_101584763	3300007004	Agricultural Soil	MQRRLAAQEMLDKHRVSCPRCRCPEAVVLIDEHFEVTWQCVDCESRWPASDEESAILLGPSLKTIH*
Ga0079218_103278933	3300007004	Agricultural Soil	MQRRLAAHDVLDKHRVSCPRCRCPEAVVLIDEQFEVTWQCVDCESRWPASDEESALLLGPSLKTIH*
Ga0079218_103488052	3300007004	Agricultural Soil	MQRRLAAHDLLDKHRGSCPRCRCPEAVVLIDEQFEVTWQCVDCESKWPASDEESELLLGPSLKTIH*
Ga0079218_107321901	3300007004	Agricultural Soil	MQRRLATQDVLDKHRVCCPRCRCPEAVVLIDEQFEVTWQCVDCESRWPASDEESELLLGPSLKTIH*
Ga0105095_102766461	3300009053	Freshwater Sediment	MQKRIALGEVLDKYRQTCPRCRCPEAIVLIDIDFEVTWQCVDCETRWPASDEARDLLLGPSLKMVH*
Ga0105107_100135855	3300009087	Freshwater Sediment	MDKRIALGEVLDKYRLVCPRCKCPEAVVLIDLDFEVTWQCVDCETRWPATDEERDLLLGPTLKMVH*
Ga0105107_111826431	3300009087	Freshwater Sediment	MQRRLAAQDVLDKHRVSCPRCRCPEAVVLIDEQFEVTWQCVDCESRWPASDEESALLLGPSLKTIH*
Ga0114129_116434152	3300009147	Populus Rhizosphere	MQRRLAVHDVLDKHRACCPRCRCPEAVVLIDEQFEVTWQCVDCESRWPASDEESALLLGPSLKTIH*
Ga0105238_110088412	3300009551	Corn Rhizosphere	MGKRVAVTELLDKHRIACPRCQCNEAVVVMDTNFEVVWQCVDCDSRWPASDDETALLLGSAMTTIH*
Ga0105347_10310401	3300009609	Soil	MQRRLATHDVLDKHRAACPRCRCPEAVVLIDELFEVTWQCVDCESRWPASDEESELLLGPSLKTIH*
Ga0105340_10391691	3300009610	Soil	MQRRLATHDVLDKHRVACPRCRCPEAVVLIDELFEVTWQCVDCESRWPASDEESELLLGPSLKTIH*
Ga0126305_100712992	3300010036	Serpentine Soil	MQRRLAAQDVLDKHRVSCPRCRCPEAVVLIDEQFEITWQCVDCESRWPASDEESELLLGPSLKTIH*
Ga0126315_104587311	3300010038	Serpentine Soil	MQRRLAVRDVLDKHRACCPRCRCPEAVVLIDEQFEITWQCVDCESRWPASDEESALLLGPSLKTIH*
Ga0126315_110185321	3300010038	Serpentine Soil	MAKRVALTELLDKHRVACPQCQCSEAVVVMDTKFEVVWQCVDCESRWPASDDETALLLGTAMTTIH*
Ga0126309_107195662	3300010039	Serpentine Soil	VRAETSFMQRRLAAQDVLDKHRVSCPRCRCPEAVVLIDEQFEITWQCVDCESRWPASDEESELLLGPSLKTIH*
Ga0134123_133810342	3300010403	Terrestrial Soil	MRKRLAVADLLDKHRVACPRCRCNEAVVVVDTKFEVVWQCVDCDSRWPASDDETALLLGSALTTIH*
Ga0137466_10401892	3300011399	Soil	MQRRLAAQDVLDKHRVSCPRCRCPEAVVLIDEQFEVTWQCVDCESRWPASDEESELLLGPSLKTIH*
Ga0137325_10598661	3300011415	Soil	MQRRLAAQDVLDKHRACCPRCRCPEAVVLIDEQFEVTWQCVDCESRWPASDEESELLLGPALKTIH*
Ga0136631_103747092	3300012043	Polar Desert Sand	MQRRIAVTEVLDKHRIVCPRCRCPEAIVLIDPQFEVTWQCVDCESRWPASDEESALLLGPALKTIH*
Ga0136635_100836741	3300012530	Polar Desert Sand	DKHRIVCPRCRCPEAIVLIDPQFEVTWQCVDCESRWPASDEESALLLGPALKTIH*
Ga0157295_101981791	3300012906	Soil	RGQALPVPLTRAAGQTDNPDMAKRVALTELLDKHRVACPRCQCSEAVVVMDTKFEVVWQCVDCESRWPASDDETALLLGTAMTTIH*
Ga0157380_109311821	3300014326	Switchgrass Rhizosphere	RLAAHDVLDKHRVACPRCRCPEAVVLIDELFEVTWQCVDCESRWPASDEESELQLGPSLKTIH*
Ga0173483_106573302	3300015077	Soil	MQRRLAVHDVLDKHRACCPRCRCTEAVVLIDEQFEITWQCVDCESRWPASDEESALLLGPSLKTIH*
Ga0173480_100753361	3300015200	Soil	MAKRVALTELLDKHRVACPRCQCSEAVVVMDTKFEVVWQCVDCESRWPASDDETALLLGTAMTTIH*
Ga0163144_103032241	3300015360	Freshwater Microbial Mat	MQRRLVLNEVLDKHRVICPRCRCPEAVVLIDALFEVSWQCVDCETRWPANDDEAALLLGSSLKTIH*
Ga0132258_116886232	3300015371	Arabidopsis Rhizosphere	MQRRLAAHDWLDKHRVACPRCRCPEAVVLIDELFEVTWQCVDCESRWPASDEESELLLGPSLKTIH*
Ga0132257_1032256222	3300015373	Arabidopsis Rhizosphere	MGKRLAVADLLDKHRVACPRCRCNEAVVVVDTKFEVVWQCVDCDSRWPASDDETALLLGSALTTIH*
Ga0163161_107393121	3300017792	Switchgrass Rhizosphere	MGKRLAVADVLDKHRVACPRCQCNEAVVVVDTKFEVVWQCVDCESRWPASDDETALLLGSALTTIH
Ga0190266_105449952	3300017965	Soil	MQRRLAAHDVLDKHRVACPRCRCPEAVVLIDELFEVTWQCVDCESRWPASDEESELLLGPSLKTIH
Ga0190265_102120582	3300018422	Soil	MQRRLAAQDILDKHRALCPRCRGPEAVVLIDEQFEVTWQCVDCESRWPASDEESELLLGSSLKTIH
Ga0190265_103490613	3300018422	Soil	MQRRLAAQDVLDKHRVCCPRCRCPEAVVLIDEQFEVTWQCVDCESRWPASDEESELLLGPALKTIH
Ga0190272_107585962	3300018429	Soil	MQRRLAAQEMLDKHRVSCPRCRCPEAVVLIDEQFEITWQCVDCESRWPASDEESAILLGPSLKTIH
Ga0190272_109790771	3300018429	Soil	ADKLFMQRRLAAQDVLDKHRVCCPRCRCPEAVVLIDEQFEVTWQCVDCESRWPASDEESELLLGPALKTIH
Ga0190272_121132072	3300018429	Soil	MQRRLAAQDVLDKHRVCCPRCRCPEAIVLIDEQFEVTWQCVDCESRWPASDEESELLLGPSLKTIH
Ga0190275_100301738	3300018432	Soil	MQRRLATTQDVLDKHRVCCPRCRCPEAVVLIDEQFEVTWQCVDCESRWPASDEESELLLGPSLKTIH
Ga0190270_100216643	3300018469	Soil	MQRRLAAHDILDKHRVSCPRCRCPEAVVLIDEQFEVTWQCVDCESRWPASDEESELLLGSSLKTIH
Ga0190270_117857693	3300018469	Soil	AEKWYMQRRLAVQEMLDKHRVSCPRCRCPEAVVLIDEQFEVTWQCVDCESRWPASDEESAILLGPSLKTIH
Ga0190274_100714364	3300018476	Soil	MYMQRRLAAHDVLDKHRVACPRCRCPEAVVLIDELFEVTWQCVDCESRWPASDEESELLLGPSLKTIH
Ga0190271_122585652	3300018481	Soil	MQRRLAAQDVLDKHRVCCPRCRCPEAVVLIDEQFEVTWQCVDCESRWPASDEESELLLRPSLKTIH
Ga0190271_123657811	3300018481	Soil	MQRRLAAQDVLDKHRVSCPRCRCPEAVVLIDEQFEVTWQCVDCESRWPASDEESALLLGPSLNTIH
Ga0190273_108728372	3300018920	Soil	MQRRLAAQEMLDKHRVSCPRCRCPEAVVLIDEHFEVTWQCVDCESRWPASDEESAILLGPSLKTIH
Ga0190264_104976523	3300019377	Soil	MLDKHRVSCPRCRCPEAVVLIDEQFEVTWQCVDCESRWPASDEESAILLGPSLKTIH
Ga0190264_106929332	3300019377	Soil	MQRRLAAQDVLVKHRVSCPRCRCPEAVVLIDEQFEVTWQCVDCESRWPASDEESALLLGPSLKTIH
Ga0190267_114617632	3300019767	Soil	MQRRLATQDVLDKHRACCPRCRCPEAVVLIDEQFEVTWQCVDCESRWPASDEESELLLGPSLKTIH
Ga0193738_10118481	3300020020	Soil	MQRRLAAQDVLDKHRVSCPRCRCPEAMVLIDEQFEVTWQCVDCESRWPASDEESALLLGPSLKTIH
Ga0163151_104961661	3300020057	Freshwater Microbial Mat	VWRCLPTRPVRADTTGMQRRLVLNEVLDKHRVICPRCRCPEAVVLIDALFEVSWQCVDCETRWPANDDEAALLLGSSLKTIH
Ga0163153_100486023	3300020186	Freshwater Microbial Mat	MQRRLVLNEVLDKHRVICPRCRCPEAVVLIDALFEVSWQCVDCETRWPANDDEAALLLGSSLKTIH
Ga0193706_10629672	3300021339	Soil	MQRRLVSQEMLDKHRVSCPRCRCPEALVLIDEQFEVTWQCVDCDSKWPASDEESAILLGPSLKTIH
Ga0207662_101938051	3300025918	Switchgrass Rhizosphere	LAAHDVLDKHRVACPRCRCPEAVVLIDELFEVTWQCVDCESRWPASDEESELLLGPSLKTIH
Ga0207694_109510441	3300025924	Corn Rhizosphere	MGKRVAVTELLDKHRIACPRCQCNEAVVVMDTNFEVVWQCVDCDSRWPASDDETALLLGSAMTTIH
Ga0207650_117324711	3300025925	Switchgrass Rhizosphere	VADVLDKHRVACPRCRCNEAVVVVDTKFEVVWQCVDCESRWPASDDETALLLGSALTTIH
Ga0207659_116952792	3300025926	Miscanthus Rhizosphere	MEKRLSLGEVLDKYRLICPRCRCNEAIVLIDIAFEVTWQCVDCETRWPASDAERELLLGPSLKMIH
Ga0207644_105254463	3300025931	Switchgrass Rhizosphere	MGKRLAVADVLDKHRVACPRCQCNEAVVVVDTKFEVVWQCVDCESRWPASDDETALLLGSALTT
Ga0207669_100127254	3300025937	Miscanthus Rhizosphere	MQRRLALTEVLDKHRAICPRCRCPEAVVLIDAQFEVTWQCIDCETRWPASDDETALLLGSSLKTIH
Ga0207679_112255341	3300025945	Corn Rhizosphere	MGKRLAVADVLDKHRVACPRCRCNEAVVVVDTKFEVVWQCVDCESRWPASDDETALLLGSALTTIH
Ga0207658_113106401	3300025986	Switchgrass Rhizosphere	PENVGMGKRLAVADVLDKHRVACPRCQCNEAVVVVDTKFEVVWQCVDCESRWPASDDETALLLGSALTTIH
Ga0207658_115250411	3300025986	Switchgrass Rhizosphere	IALDEVLDKHSTCCPHCQCPEAVVLLNEQFEVLWQCVDCESRWPASEEESALLLSFAPKMIH
Ga0209983_10276122	3300027665	Arabidopsis Thaliana Rhizosphere	MQRRLAVHEVLDKHRAYCPRCRCTEAVVLIDEQFEITWQCVDCESRWPASDEESALLLGPSLKTIH
Ga0209592_11497551	3300027731	Freshwater Sediment	MQKRIALGEVLDKYRQTCPRCRCPEAIVLIDIDFEVTWQCVDCETRWPASDEARDLLLGPSLKMVH
Ga0209706_100160724	3300027818	Freshwater Sediment	MDKRIALGEVLDKYRLVCPRCKCPEAVVLIDLDFEVTWQCVDCETRWPATDEERDLLLGPTLKMVH
Ga0209798_101293403	3300027843	Wetland Sediment	MRRRLAVTRVLDKHRITCPRCRCPEGVVVIDATFNVGWQCIDCEFRWPASSEEATLLLGSSLKTIH
Ga0209486_102635863	3300027886	Agricultural Soil	DVLDKHRVSCPRCRCPEAVVLIDEQFEVTWQCVDCESRWPASDEESALLLGPSLKTIH
Ga0209486_109962882	3300027886	Agricultural Soil	MQRRLAAQDVLDKHRVCCPRCRCPEAVVLIDEQFEVTWQCVDCESRWPASDEESELLLGSSLKTIH
Ga0272482_102228151	3300028578	Soil	MQRRLATPDLLDKHRVSCPRCRCPEAVVLIDEQFEVTWQCVDCESRWPASDEESEMLLGPALRTIH
Ga0299906_106704251	3300030606	Soil	MQRRLAAQDLLDKHRVSCPRCRCPEAVVLIDEQFEVTWQCVDCESRWPASDEESALLLGPSLKTIH
Ga0310888_100669841	3300031538	Soil	VSADKLGMEKRLSLGEVLDKYRLICPRCRCNEAIVLIDIAFEVTWQCVDCETRWPASDAERELLLGPSLKMIH
Ga0307469_108289142	3300031720	Hardwood Forest Soil	MRKHVRIDELLDKHNVMCPRCRGPEAVVLIDAQFELTWQCVDCQTRWPASDEETEMMLGSALKTIH
Ga0307413_107900702	3300031824	Rhizosphere	PLRVVRADNVYMQRRLAAREVLDKHRVSCPRCRCPEAVVLIDELFEVTWQCVDCETRWPASDEESELLLGPASKTVH
Ga0310904_104485821	3300031854	Soil	MQRRLATHDVLDKHRVACPRCRCPEAVVLIDELFEVTWQCVDCESRWPASDEESELLLGPSLKTIH
Ga0310900_105532703	3300031908	Soil	TELLDKHRVACPRCQCSEAVVVMDTKFEVVWQCVDCESRWPASDDETALLLGTAMTTIH
Ga0310900_107891842	3300031908	Soil	MQRRLAVHDVLDKHRVCCPRCRCTEAVVLIDEQFEITWQCVDCESRWPASDEESALLLGPSLKTIH
Ga0310901_100343941	3300031940	Soil	MEKRLSLGEVLDKYRLICPRCRCNEAIVLIDIAFEVTWQCVDCETRWPASDAERELLLGP
Ga0307409_1020358352	3300031995	Rhizosphere	MQRRLAAQDVLDKHRVSCPRCRCPEAVVLIDEQFEITWQCVDCESRWPASDEESELLLGPSLKTIH
Ga0307416_1001191155	3300032002	Rhizosphere	VVRADNVYMQRRLAAREVLDKHRVSCPRCRCPEAVVLIDELFEVTWQCVDCETRWPASDEESELLLGPASKTVH
Ga0310897_100198911	3300032003	Soil	RLSLGEVLDKYRLICPRCRCNEAIVLIDIAFEVTWQCVDCETRWPASDAERELLLGPSLKMIH
Ga0315910_105607251	3300032144	Soil	LGEVLDKYRSACPRCKCPEAIVLIDLSFEVTWQCVDCETRWPASDEERDMLLGPALKTVH
Ga0370481_0101907_278_466	3300034281	Untreated Peat Soil	VAIDEALDKHHITCPRCRGPEAVVVLNERFEVLWQCVDCESRWPASDEETALILGVSTKTVH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F085759

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences