Metagenome Family F085703

Basic Information
Family ID	F085703
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	59 residues
Representative Sequence	MAAIEIYGAPVVEKYYCLYCSFDMTITMVCTDCNEYKSAVTLKEFVEFNGHYPKLRAVK
Number of Associated Samples	69
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	92.79 %
% of genes near scaffold ends (potentially truncated)	7.21 %
% of genes from short scaffolds (< 2000 bps)	58.56 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Duplodnaviria (79.279 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (36.937 % of family members)
Environment Ontology (ENVO)	Unclassified (63.964 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (72.072 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68. 1JGI12421J11937_100103299 2FwDRAFT_100633897 3B570J14230_101038694 4B570J40625_1002061205 5Water_1019338 6JGI25907J50239_10317362 7JGI25913J50563_10729272 8JGI25925J51416_100314175 9Ga0065166_103710801 10Ga0065166_104251392 11Ga0066179_101737431 12Ga0066180_103023072 13Ga0066599_1001085763 14Ga0069718_160876112 15Ga0070374_102100022 16Ga0070374_102221503 17Ga0049080_102946722 18Ga0049085_102079901 19Ga0070744_100246314 20Ga0070744_100576934 21Ga0070744_100687153 22Ga0070744_101302213 23Ga0070744_102206412 24Ga0075464_101442892 25Ga0075464_101603623 26Ga0075464_110766302 27Ga0102859_10105813 28Ga0102859_10535182 29Ga0105746_10292453 30Ga0114336_100533019 31Ga0114364_10845202 32Ga0114880_10131354 33Ga0105105_100234724 34Ga0105093_102640241 35Ga0105099_104341643 36Ga0114968_1000781211 37Ga0114968_100705957 38Ga0114977_100684056 39Ga0114977_102523033 40Ga0114977_106105642 41Ga0114978_101415964 42Ga0114978_103715782 43Ga0114978_104518653 44Ga0114970_100659753 45Ga0114975_100515463 46Ga0114975_106377092 47Ga0114969_100033987 48Ga0114969_101346733 49Ga0114974_1001459311 50Ga0114974_100191526 51Ga0114974_100353198 52Ga0114974_100380451 53Ga0114974_102332014 54Ga0114974_107349521 55Ga0114974_107591102 56Ga0114976_100381884 57Ga0114976_100805113 58Ga0114976_104445982 59Ga0129324_101207262 60Ga0133913_111266831 61Ga0136712_10091684 62Ga0157138_10788932 63Ga0157210_100025638 64Ga0181344_10155581 65Ga0181344_10300802 66Ga0181344_11056843 67Ga0181343_10105423 68Ga0181359_10837752 69Ga0181359_11032934 70Ga0211734_100172496 71Ga0211726_105193573 72Ga0208360_10045514 73Ga0214163_10599504 74Ga0181351_10740754 75Ga0181351_10992342 76Ga0212119_10612201 77Ga0214919_1000642417 78Ga0214919_100763301 79Ga0244775_100746963 80Ga0244775_100927916 81Ga0244775_105067983 82Ga0244775_109274693 83Ga0244776_106560232 84Ga0209551_11731332 85Ga0209297_10021348 86Ga0209297_11491571 87Ga0209087_10026358 88Ga0209087_10037065 89Ga0209087_10489193 90Ga0209087_10620174 91Ga0209190_11182963 92Ga0209296_10078518 93Ga0209296_10166238 94Ga0209296_10276312 95Ga0209296_10420102 96Ga0209088_100269012 97Ga0209134_100063297 98Ga0209134_100727551 99Ga0209500_103593441 100Ga0209107_100176823 101Ga0209668_100306964 102Ga0209400_100272018 103Ga0209400_10499422 104Ga0209191_10419134 105Ga0247723_10080468 106Ga0247723_10153397 107Ga0304730_10429103 108Ga0315909_107724202 109Ga0315901_107361871 110Ga0315274_103268922 111Ga0315284_110487542
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68. 1JGI12421J11937_100103299 2FwDRAFT_100633897 3B570J14230_101038694 4Ga0065166_104251392 5Ga0075464_101603623 6Ga0114977_102523033 7Ga0133913_111266831 8Ga0214919_1000642417 9Ga0209500_103593441
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58. 1Ga0211726_105193573 2FwDRAFT_100633897 3B570J40625_1002061205 4JGI25907J50239_10317362 5JGI25925J51416_100314175 6Ga0075464_101442892 7Ga0075464_101603623 8Ga0075464_110766302 9Ga0114336_100533019 10Ga0114880_10131354 11Ga0114968_1000781211 12Ga0114977_106105642 13Ga0114978_103715782 14Ga0114969_100033987 15Ga0114969_101346733 16Ga0114974_1001459311 17Ga0114974_107591102 18Ga0114976_100381884 19Ga0114976_104445982 20Ga0133913_111266831 21Ga0136712_10091684 22Ga0157210_100025638 23Ga0181344_10300802 24Ga0211734_100172496 25Ga0214919_1000642417 26Ga0214919_100763301 27Ga0244775_105067983 28Ga0244775_109274693 29Ga0315909_107724202
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.20% β-sheet: 8.05% Coil/Unstructured: 82.76%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF14279	HNH_5	5.41
PF12850	Metallophos_2	4.50
PF01844	HNH	2.70
PF01527	HTH_Tnp_1	1.80
PF06199	Phage_tail_2	1.80
PF03354	TerL_ATPase	0.90
PF04586	Peptidase_S78	0.90
PF05065	Phage_capsid	0.90
PF09723	Zn-ribbon_8	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG3740	Phage head maturation protease	Mobilome: prophages, transposons [X]	0.90
COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	Mobilome: prophages, transposons [X]	0.90
COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	Mobilome: prophages, transposons [X]	0.90

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	0.90 %
Unclassified	root	N/A	0.00 %
Viruses	superkingdom	All Organisms → Viruses	99.10 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.90 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	79.28 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.82 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.90 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	79.28 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.82 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.82 %
Unclassified	root	N/A	0.00 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	79.28 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.90 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	79.28 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.82 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.90 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	79.28 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.82 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.82 %
Unclassified	root	N/A	0.00 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	79.28 %

Scaffold	Taxonomy	Length	IMG/M Link
3300000756\|JGI12421J11937_10010329	All Organisms → Viruses → Predicted Viral	3594	Open in IMG/M
3300000882\|FwDRAFT_10063389	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2094	Open in IMG/M
3300001282\|B570J14230_10103869	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	853	Open in IMG/M
3300002835\|B570J40625_100206120	All Organisms → Viruses → Predicted Viral	2121	Open in IMG/M
3300002930\|Water_101933	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3711	Open in IMG/M
3300003394\|JGI25907J50239_1031736	All Organisms → Viruses → Predicted Viral	1128	Open in IMG/M
3300003431\|JGI25913J50563_1072927	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	521	Open in IMG/M
3300003497\|JGI25925J51416_10031417	All Organisms → Viruses → Predicted Viral	1513	Open in IMG/M
3300004112\|Ga0065166_10371080	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	594	Open in IMG/M
3300004112\|Ga0065166_10425139	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	557	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.20%
Terrestrial	Environmental → Terrestrial	1.80%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.80%
Freshwater	Environmental → Aquatic → Freshwater	81.98%
Marine	Environmental → Aquatic → Marine	16.22%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	4.50%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	3.60%
Lake	Environmental → Aquatic → Freshwater → Lake	45.05%
Lentic	Environmental → Aquatic → Freshwater → Lentic	26.13%
Lotic	Environmental → Aquatic → Freshwater → Lotic	2.70%
Pond	Environmental → Aquatic → Freshwater → Pond	0.90%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.60%
Unclassified	Environmental → Aquatic → Marine → Unclassified	8.11%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	3.60%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.80%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	3.60%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	3.60%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	1.80%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.80%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.90%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	0.90%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	43.24%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	19.82%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	8.11%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	4.50%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.60%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	3.60%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	2.70%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.80%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	2.70%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	1.80%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	8.11%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	2.70%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.90%
Estuary Water	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuary Water	0.90%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	3.60%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.80%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.80%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	1.80%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	1.80%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	1.80%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	0.90%
Freshwater And Marine	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater And Marine	0.90%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	1.80%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	36.94%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	18.02%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.90%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.90%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	1.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.70%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.90%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	1.80%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.80%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.90%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300000882	Freshwater microbial communities from the Columbia River	Environmental	Open in IMG/M
3300001282	Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnion	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300002930	Estuary water microbial communities from Pearl Estuary, Zhujiang, China	Environmental	Open in IMG/M
3300003394	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN	Environmental	Open in IMG/M
3300003431	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN	Environmental	Open in IMG/M
3300003497	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN	Environmental	Open in IMG/M
3300004112	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)	Environmental	Open in IMG/M
3300004126	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.DN (version 2)	Environmental	Open in IMG/M

Showing 1 to 10 of 69 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12421J11937_100103299	3300000756	Freshwater And Sediment	MQIGTQMSAIEIYGPLVQEKYYCLYCSFDMTITKVCTECNEYKSAVTLQEFFEMNGHYPKPRLVK*
FwDRAFT_100633897	3300000882	Freshwater And Marine	MATIEIYGPAVVERYYCLYCSFDMTATMVCKDCNEYKSAVTLQEFVEFNGHYPKLRAVK*
B570J14230_101038694	3300001282	Freshwater	IEIYGPVKVENYYCCYCGFDMTITQVCTDCNEYKSAVTLQEYIEMNGRYPKMRVVK*
B570J40625_1002061205	3300002835	Freshwater	MATIEIYGPVKVENYYCCYCGFDMTITQVCTDCNEYKSAVTLQEYIEMNGRYPKMRVVK*
Water_1019338	3300002930	Estuary Water	MATIEIYGAPSVETYYCIYCGFDMTATGICIDCNEYKSAVTLQEFVEFNGHYPKLKAVK*
JGI25907J50239_10317362	3300003394	Freshwater Lake	MSAIEIYDLVKTERYYCLYCSFDMTITKVCLECNEYKSAVTLQEFFEMNKHYPKPRLVK*
JGI25913J50563_10729272	3300003431	Freshwater Lake	MAAIEIYGAPAIENYYCLYCGFDMTITHVCTDCNEYKSAVTLEEYFEMNGHYPKLRAVK*
JGI25925J51416_100314175	3300003497	Freshwater Lake	MSAIEIYGPLVQEKYYCLYCSFDMTITKVCLECNEYKSAVTLQEFFEMNGHYPKPRLVK*
Ga0065166_103710801	3300004112	Freshwater Lake	MAAIEIYGPLAVEKLYCLYCSFDMTVTGVCIDCNEYKSAVTLQEFIEHNGHYPKLRAVK*
Ga0065166_104251392	3300004112	Freshwater Lake	MAAIEIYGAPAIENFYCLYCGFDMTITHVCTDCNEYKSAVTLEEYFEMNGHYPKLRAVK*
Ga0066179_101737431	3300004126	Freshwater Lake	MQIGTQMSAIEIYELDKTERYYCLYCSFDMTITKVCLYCNEYKSAVTLQEFFEMNGHYPKPRLVK*
Ga0066180_103023072	3300004128	Freshwater Lake	MSAIEIYGPRVQEKYYCLYCSFDMTITKVCTECNEYKSAVTLQEFFEMNGHYPKLKLVK*
Ga0066599_1001085763	3300004282	Freshwater	VATIEIYGAPKVESYYCCYCGFDMTITHVCTDCNEYKSAVTLAEYFEMNGHYPKMRVVK*
Ga0069718_160876112	3300004481	Sediment	MATIEIYGAPKVENYYCCYCGFDMTITHVCTDCNEYKSAVTLAEYFDMNGHYPKLRAVK*
Ga0070374_102100022	3300005517	Freshwater Lake	MSTIEIYGPLVQEKYYCLYCSFDMTITKVCTECNEYKSAVTLQEFFEMNGHYPKLNLVK*
Ga0070374_102221503	3300005517	Freshwater Lake	MSAIEIYGPLVQEKYYCLYCSFDMTITKVCTECNEYKSAVTLQEFFEMNGHYPKLKLVK*
Ga0049080_102946722	3300005582	Freshwater Lentic	MSTIEIYGPLVQEKYYCLYCSFDMTITKVCTECNEYKSAVTLQEFFEMNGHYPKPRLVK*
Ga0049085_102079901	3300005583	Freshwater Lentic	MAAIEIYGAPVVEKYYCLYCSFDMTITMVCIDCNEYKSAVTLQEFIEFNGHYPRLRAVK*
Ga0070744_100246314	3300006484	Estuarine	MSTIEIYGPLVQEKYYCLYCSFDMTITKVCLDCNEYKSAVTLQEFFEMNGHYPKLKLVK*
Ga0070744_100576934	3300006484	Estuarine	MAAIEIYGAPVVEKYYCLYCSFDMTETMVCTDCNEYKSAVTLNEFVSMNGHYPKLRAVK*
Ga0070744_100687153	3300006484	Estuarine	MATIEIYGAPSVQTYYCIYCGFDMTATGICIDCHEYKSAVTLQEFVEFNGHYPKLKAVK*
Ga0070744_101302213	3300006484	Estuarine	MAAIEIYGAPVVEKYYCLYCSFDMTATMVCIDCNEYKSAVTLQEFIEFNGHYPKLRAVK*
Ga0070744_102206412	3300006484	Estuarine	MSTIEIYGAPVVDNYYCLYCGFDMTVTMVCTDCNEYKSAVTLEEYFEMNGHYPKLRAVK*
Ga0075464_101442892	3300006805	Aqueous	MATIEVYYAPTVERYYCLYCSFDMTETMVCTDCNEYKSAVTLEEFIEMNGHYPKLRAVK*
Ga0075464_101603623	3300006805	Aqueous	MATIEIYESAVTKQERYYCVYCGFDMTIKQICIDCNEYKSAVTLAEFVEMNGCYPKMRRIK*
Ga0075464_110766302	3300006805	Aqueous	MGAIEIYGAPIVNNFYCCYCGFDMTIAQVCTDCNEYKSAVTLEEYIEMNGHYPTLRAVK*
Ga0102859_10105813	3300007708	Estuarine	MATIEIYGPVKVENYYCCYCGFDMTIAQVCTDCNEYKSAVTLQEYIEMNGRYPKMRVVK*
Ga0102859_10535182	3300007708	Estuarine	MAAIEIYGAPIVNNFYCCYCGFDMTISQVCTDCNEYKSAVTLDEYIEMNGHYPKLRAVK*
Ga0105746_10292453	3300007973	Estuary Water	MSAIEIYGPLVQEKYYCLYCSFDMTITKVCTECNEYKSAVTLQEFFEMNGHYPKPRLVK*
Ga0114336_100533019	3300008261	Freshwater, Plankton	MATIEIYGAPKVENYYCCYCGFDMTITHVCTDCNEYKSAVTLQEYFEMNGHYPRLRAVK*
Ga0114364_10845202	3300008267	Freshwater, Plankton	MATIEIYGAPKVENYYCCYCGFDMTITHVCTDCNEYKSAVTLQEYFEMNGHY
Ga0114880_10131354	3300008450	Freshwater Lake	MAAIEIYGAPIVNNFYCLYCGFDMTISKVCTDCNEYKSAVTLDEYIEMNGHYPKLRAVK*
Ga0105105_100234724	3300009009	Freshwater Sediment	MATIEIYGAPKVENYYCCYCGFDMTITQVCTDCNEYKSAVTLSEYIEMNGHYPKLRAVK*
Ga0105093_102640241	3300009037	Freshwater Sediment	MATIEIYGAPKIENYYCCYCGFDMTITHVCTDCNEYKSAVTLSEYIEMNGHYPKLRAVK*
Ga0105099_104341643	3300009082	Freshwater Sediment	SGCIMATIEIYGAPKVESYYCCYCGFDMTITQVCTDCNEYKSAVTLSEYIEMNGHYPKLRAVK*
Ga0114968_1000781211	3300009155	Freshwater Lake	MTTIELYYTPPVERYYCLYCSFDMTETMVCTDCNEYKSAVTLQEFVEFNGHYPKLRAVN*
Ga0114968_100705957	3300009155	Freshwater Lake	MTTIEVYYTPPVERYYCLYCSFDMTETMVCTDCNEYKSAVTLQEFVEFNGHYPKLRAVN*
Ga0114977_100684056	3300009158	Freshwater Lake	MATIEVYYAPVVEKYYCLYCSFDMTETMVCTDCNEYKSAVTLEEFIEMNGHYPKLRAVK*
Ga0114977_102523033	3300009158	Freshwater Lake	MATIEVFYAPNTCAYYCLFCGFDMTSTGICTDCNEYKSAVTLEEYIEHNGHYPKLRAVK*
Ga0114977_106105642	3300009158	Freshwater Lake	MATIEVYYTPAVEKYYCLYCSFDMTATMVCTDCNEYKSAVTLQEFVEFNGHYPKLRAVK*
Ga0114978_101415964	3300009159	Freshwater Lake	MAAIEIYGAPVVEKYYCLYCSFDMTATMVCLDCNEYKSAVTLQEFIEFNGHYPKLRAVK*
Ga0114978_103715782	3300009159	Freshwater Lake	MATIEIYGAPVVEKFYCVYCSFDMTITGVCTDCNEYKSAVTLEEFIQMNGHYPRLRAVK*
Ga0114978_104518653	3300009159	Freshwater Lake	MATIEVYYTPAVEKYYCLYCSFDMTATMVCTDCNEYKSAVTLQEFVEFNGHYPKLKAVK*
Ga0114970_100659753	3300009163	Freshwater Lake	MTTIEVYYTPPVEKYYCLYCSFDMTETMVCTDCNEYKSAVTLQEFVEFNGHYPKLRAVN*
Ga0114975_100515463	3300009164	Freshwater Lake	MAAIEIYGSLAVEKLYCIYCSFDMTLTGVCIDCNEYKSAVTLQEFIKHNGHYPKLRAVK*
Ga0114975_106377092	3300009164	Freshwater Lake	MAAIEIYGPLAKEKWYCIYCSFDMTLTGVCTDCNEYKSAVTLQEFIEHNGHYPKLRAVK*
Ga0114969_100033987	3300009181	Freshwater Lake	MATIEIYGAPSVKTYYCVYCGFDMTTTGICIDCNEYKSAVTLQEFVEFNGHYPKLKAVK*
Ga0114969_101346733	3300009181	Freshwater Lake	MATIEIYGAPILEKYYCLYCSFDMTETMVCTDCNEYKSAVTLNEFVSMNGHYPKLRTVK*
Ga0114974_1001459311	3300009183	Freshwater Lake	MGAIEIYGPLAVEKWYCLYCSFDMTITGICTDCNEYKSAVTLEEFVEHNGHYPRLRVVK*
Ga0114974_100191526	3300009183	Freshwater Lake	MAAIEIYGAPVVERYYCLYCSFDMTATMVCLDCNEYKSAVTLQEFIEFNGHYPKLRAVK*
Ga0114974_100353198	3300009183	Freshwater Lake	MATIEVYYTPAAEKYYCLYCSFDMTATMVCTDCNEYKSAVTLQEFVEFNGHYPKLRAVK*
Ga0114974_100380451	3300009183	Freshwater Lake	MATIEIYGENAVQNWYCLYCGFDMTVTMVCTDCNEYKSAVTLEYFVEWNGHFPKLRAVK*
Ga0114974_102332014	3300009183	Freshwater Lake	MATIEIYGENAVQNWYCLYCGFDMTVTMVCTDCKEYKSAVTLEYFVEWNGHYPKLRAVK*
Ga0114974_107349521	3300009183	Freshwater Lake	MATIEIYGAPTVERYYCLYCSFDMTETMVCVDCNEYKSAVTLEEFIEFNGHYPKLRAVK*
Ga0114974_107591102	3300009183	Freshwater Lake	MATIEVFYAPNTCAYYCLFCGFDMTITGICTDCNEYKSAVTLEEYVEHNGHYPKLRAVK*
Ga0114976_100381884	3300009184	Freshwater Lake	MAAIEIYGAPAIENYYCLYCGFDMTITQVCTDCNEYKSAVTLEEYFEMNGHYPKLRAVK*
Ga0114976_100805113	3300009184	Freshwater Lake	MATIEVFYAPNTCAYYCLFCGFDMTSTGICTDCNEYKSAVTLEEYVEHNGHYPRLRAVK*
Ga0114976_104445982	3300009184	Freshwater Lake	MATIEIYGVNAVQNWYCLYCGFDMTITGVCTDCNEYKSAVTLEYFVEWNGHYPKLRVIK*
Ga0129324_101207262	3300010368	Freshwater To Marine Saline Gradient	MATIEIYGAPKVENYYCCYCGFDMTITQVCTDCNEYKSAVTLSEYYEMNGHYPKMRVVK*
Ga0133913_111266831	3300010885	Freshwater Lake	GGCIMATIEIYGENAVQNWYCLYCGFDMTVTMVCTDCKEYKSAVTLEYFVEWNGHYPKLRAVK*
Ga0136712_10091684	3300012266	Freshwater	MATIEIYGAPKVENYYCCYCGFDMTIEQFCIDCNEYKSAVTLAEYVDMNGHYPKLRAVK*
Ga0157138_10788932	3300012352	Freshwater	MATIEIYGAPKVENYYCCYCGFDMTITQVCTDCNEYKSAVTLEEYFEMNGHYPRLRAVK*
Ga0157210_100025638	3300012665	Freshwater	MATIEIYGPITVENYYCCYCGFDMTITQVCKDCNEYKSAVTLDEYVQLNGRYPKMRVIK*
Ga0181344_10155581	3300017754	Freshwater Lake	MAAIEIYGAPAIENFYCLYCGFDMTITHVCTDCNEYKSAVTLEEYFEMNGHYPKLRAVK
Ga0181344_10300802	3300017754	Freshwater Lake	MAAIEIYGPLAVEKLYCLYCSFDMTVTGVCIDCNEYKSAVTLQEFIEHNGHYPKLRAVK
Ga0181344_11056843	3300017754	Freshwater Lake	MAAIEIYGAPAIENYYCLYCGFDMTMTHVCTECNEYKSAVTLEEYFEMNGHYPKLRAAK
Ga0181343_10105423	3300017766	Freshwater Lake	MAAIEIYGVPAIENFYCLYCGFDMTITHVCTDCNEYKSAVTLEEYFEMNGHYPKLRAVK
Ga0181359_10837752	3300019784	Freshwater Lake	MQIGTQMSAIEIYELDKTERYYCLYCSFDMTITKVCLYCNEYKSAVTLQEFFEMNGHYPKPRLVK
Ga0181359_11032934	3300019784	Freshwater Lake	MSAIEIYGPLVQEKYYCLYCSFDMTITKVCLECNEYKSAVTLQEFFEMNGHYPKPRLVK
Ga0211734_100172496	3300020159	Freshwater	MATIEIYGAPKVENYYCCYCGFDMTITHICADCNEYKSAVTLAEYFEMNGHYPKMRVVK
Ga0211726_105193573	3300020161	Freshwater	MAAIEIYGAPVVEKYYCLYCSFDMTITMVCTDCNEYKSAVTLKEFVEFNGHYPKLRAVK
Ga0208360_10045514	3300020551	Freshwater	MATIEIYGPVKVENYYCCYCGFDMTITQVCTDCNEYKSAVTLQEYIEMNGRYPKMRVVK
Ga0214163_10599504	3300021141	Freshwater	IEIYGPVKVENYYCCYCGFDMTITQVCTDCNEYKSAVTLQEYIEMNGRYPKMRVVK
Ga0181351_10740754	3300022407	Freshwater Lake	MAAIEIYGAPIVNNFYCCYCGFDMTIAQVCTDCNEYKSAVTLDEYIEMNGHYPKLRAVK
Ga0181351_10992342	3300022407	Freshwater Lake	MSTIEIYGPLVQEKYYCLYCSFDMTITKVCTECNEYKSAVTLQEFFEMNGHYPKPRLVK
Ga0212119_10612201	3300022543	Freshwater	IMATIEIYGAPKVENYYCLYCGFDMTITQVCTDCNEYKSAVTLEEYFEMNGHYPRLRAVK
Ga0214919_1000642417	3300023184	Freshwater	MATIEIYENPTKRAEQYFCVYCGFDMTIAGVCIDCNEYKSAVTLDEYYELNGHYPKPRLV
Ga0214919_100763301	3300023184	Freshwater	MATIEIYETRIVKAEQYFCLYCGFDMTISGVCTDCNEYKSAVTLDEYYEMNGHYPKLKLV
Ga0244775_100746963	3300024346	Estuarine	MAAIEIYGAPVVEKYYCLYCSFDMTETMVCTDCNEYKSAVTLNEFVSMNGHYPKLRAVK
Ga0244775_100927916	3300024346	Estuarine	MAAIEIYGAPVVEKYYCLYCSFDMTATMVCIDCNEYKSAVTLQEFIEFNGHYPKLRAVK
Ga0244775_105067983	3300024346	Estuarine	MSTIEIYGAPVVDNYYCLYCGFDMTVTMVCTDCNEYKSAVTLEEYFEMNGHYPKLRAVK
Ga0244775_109274693	3300024346	Estuarine	MATIEIYGPLATQRWYCIYCSFDMTLTGVCTDCNEYKSAVTLEEFIEHNGHYPKLRVVK
Ga0244776_106560232	3300024348	Estuarine	MAAIEIYGAPIVNNFYCCYCGFDMTISQVCTDCNEYKSAVTLDEYIEMNGHYPKLRAVK
Ga0209551_11731332	3300027689	Freshwater Lake	MQIGTQMSAIEIYGPLVQEKYYCLYCSFDMTITKVCLECNEYKSAVTLQEFFEMNGHYPKPRLVK
Ga0209297_10021348	3300027733	Freshwater Lake	MATIEVYYAPVVEKYYCLYCSFDMTETMVCTDCNEYKSAVTLEEFIEMNGHYPKLRAVK
Ga0209297_11491571	3300027733	Freshwater Lake	MATIEVYYTPAVEKYYCLYCSFDMTATMVCTDCNEYKSAVTLQEFVEFNGHYPKLRAVK
Ga0209087_10026358	3300027734	Freshwater Lake	MATIEVFYAPNTCAYYCLFCGFDMTSTGICTDCNEYKSAVTLEEYIEHNGHYPKLRAVK
Ga0209087_10037065	3300027734	Freshwater Lake	MAAIEIYGAPAIENYYCLYCGFDMTITQVCTDCNEYKSAVTLEEYFEMNGHYPKLRAVK
Ga0209087_10489193	3300027734	Freshwater Lake	MAAIEIYGAPAIENYYCLYCGFDMTITQVCTDCNEYKSTVTLEEYFEMNGHYPKLRAVK
Ga0209087_10620174	3300027734	Freshwater Lake	MATIEVFYAPNTCAYYCLFCGFDMTSTGICTDCNEYKSAVTLEEYVEHNGHYPRLRAVK
Ga0209190_11182963	3300027736	Freshwater Lake	MTTIEVYYTPPVEKYYCLYCSFDMTETMVCTDCNEYKSAVTLQEFVEFNGHYPKLRAVN
Ga0209296_10078518	3300027759	Freshwater Lake	MAAIEIYGAPVVERYYCLYCSFDMTATMVCLDCNEYKSAVTLQEFIEFNGHYPKLRAVK
Ga0209296_10166238	3300027759	Freshwater Lake	MATIEVYYTPAAEKYYCLYCSFDMTATMVCTDCNEYKSAVTLQEFVEFNGHYPKLRAVK
Ga0209296_10276312	3300027759	Freshwater Lake	MAAIEIYGPLAKEKWYCIYCSFDMTLTGVCTDCNEYKSAVTLQEFIEHNGHYPKLRAVK
Ga0209296_10420102	3300027759	Freshwater Lake	MGAIEIYGPLAVEKWYCLYCSFDMTITGICTDCNEYKSAVTLEEFVEHNGHYPRLRVVK
Ga0209088_100269012	3300027763	Freshwater Lake	MATIEVYYTPAVEKYYCLYCSFDMTATMVCTDCNEYKSAVTLQEFVEFNGHYPKLKAVK
Ga0209134_100063297	3300027764	Freshwater Lake	MAAIEIYGAPAIENYYCLYCGFDMTITHVCTDCNEYKSAVTLEEYFEMNGHYPKLRAVK
Ga0209134_100727551	3300027764	Freshwater Lake	IYGAPAIENYYCLYCGFDMTITHVCTECNEYKSAVTLEEYFEMNGHYPKLRAVK
Ga0209500_103593441	3300027782	Freshwater Lake	QHGIERIMATIEIYGAPVVEKFYCVYCSFDMTITGVCTDCNEYKSAVTLEEFIQMNGHYPRLRAVK
Ga0209107_100176823	3300027797	Freshwater And Sediment	MQIGTQMSAIEIYGPLVQEKYYCLYCSFDMTITKVCTECNEYKSAVTLQEFFEMNGHYPKPRLVK
Ga0209668_100306964	3300027899	Freshwater Lake Sediment	MATIEIYENPTKRAEQYFCVYCGFDMTIAGVCIDCNEYKSAVTLDEYYEMNGHYPKLKLV
Ga0209400_100272018	3300027963	Freshwater Lake	MTTIELYYTPPVERYYCLYCSFDMTETMVCTDCNEYKSAVTLQEFVEFNGHYPKLRAVN
Ga0209400_10499422	3300027963	Freshwater Lake	MTTIEVYYTPPVERYYCLYCSFDMTETMVCTDCNEYKSAVTLQEFVEFNGHYPKLRAVN
Ga0209191_10419134	3300027969	Freshwater Lake	MAAIEIYGSLAVEKLYCIYCSFDMTLTGVCIDCNEYKSAVTLQEFIKHNGHYPKLRAVK
Ga0247723_10080468	3300028025	Deep Subsurface Sediment	MATIEIYGPITVENYYCCYCGFDMTITQVCTDCNEYKSAVTLDEYVQLNGRYPKMRVIK
Ga0247723_10153397	3300028025	Deep Subsurface Sediment	MATIEIYGAPKVENYYCCYCGFDMTIEQVCINCNEYKSAVTLAEYVDMNGHYPKLRAVK
Ga0304730_10429103	3300028394	Freshwater Lake	MATIEIYGAPSVKTYYCVYCGFDMTTTGICIDCNEYKSAVTLQEFVEFNGHYPKLKAVK
Ga0315909_107724202	3300031857	Freshwater	MSTIEIYGPVTEEKYYCLYCSFDMTITKACLDCNEYKSAVTLEEFYEMNGHYPKLKLVK
Ga0315901_107361871	3300031963	Freshwater	MATIEIYGAPKIENYYCCYCGFDMTITHVCTDCNEYKSAVTLSEYYEMNGHYPKMRVVK
Ga0315274_103268922	3300031999	Sediment	MAAIEIYGAPVVERYYCLYCSFDMTITMVCTDCNEYKSAVTLQQFIQFNGHYPKLRAVK
Ga0315284_110487542	3300032053	Sediment	MAAIEIYGAPVVEKYYCLYCSFDMTITMVCTDCNEYKSAVTLQEFIQMNGHYPRLRAVK

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F085703

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences