Metagenome Family F085598

Basic Information
Family ID	F085598
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	55 residues
Representative Sequence	MSVRLNNWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMTLVKKLEDKIATHLAKTK
Number of Associated Samples	81
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	76.58 %
% of genes near scaffold ends (potentially truncated)	36.04 %
% of genes from short scaffolds (< 2000 bps)	70.27 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	No

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Duplodnaviria (47.748 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (38.739 % of family members)
Environment Ontology (ENVO)	Unclassified (65.766 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (73.874 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76. 1Water_1003682 2JGI25908J49247_1000003040 3JGI25909J50240_10912972 4JGI25930J51415_10082999 5Ga0049083_103137513 6Ga0049081_100194902 7Ga0049080_101714461 8Ga0075471_102513643 9Ga0070749_100146936 10Ga0070749_104947622 11Ga0070749_106619542 12Ga0075464_100612888 13Ga0075464_108742652 14Ga0102862_10774051 15Ga0114363_11869531 16Ga0114876_12382951 17Ga0114966_103580435 18Ga0114979_107480892 19Ga0114959_100400695 20Ga0114974_105592032 21Ga0114976_102838961 22Ga0114976_104081313 23Ga0133913_106825669 24Ga0137575_100456971 25Ga0139557_10019223 26Ga0151515_1076725 27Ga0136709_10622942 28Ga0153697_15538 29Ga0153703_121425 30Ga0153799_10197651 31Ga0153799_10234532 32Ga0177922_111932372 33Ga0119960_10109301 34Ga0181338_10178751 35Ga0181363_100121210 36Ga0181350_10176037 37Ga0181350_10394575 38Ga0181350_10705575 39Ga0181347_10943571 40Ga0181362_10807202 41Ga0181365_10637104 42Ga0181365_11030381 43Ga0181365_11061831 44Ga0181352_10336454 45Ga0181352_11722851 46Ga0181344_10504131 47Ga0181344_11170462 48Ga0181344_11983482 49Ga0181356_11060403 50Ga0181343_11800752 51Ga0181358_10115176 52Ga0181358_11146662 53Ga0181357_10254242 54Ga0181357_10430673 55Ga0181349_10459942 56Ga0181349_11744751 57Ga0181349_12727292 58Ga0181349_13165883 59Ga0181346_10383241 60Ga0181346_10549321 61Ga0181346_11477481 62Ga0181346_12676991 63Ga0181346_13343041 64Ga0181348_11432485 65Ga0181361_1000645 66Ga0181359_100567116 67Ga0181359_10371947 68Ga0181359_10998252 69Ga0181359_12026042 70Ga0207193_12665532 71Ga0211734_109644442 72Ga0211726_105228572 73Ga0181556_11111092 74Ga0194047_1000307113 75Ga0194047_100568519 76Ga0194047_104087003 77Ga0213922_10710992 78Ga0181354_10497163 79Ga0181351_11016086 80Ga0181351_11838821 81Ga0214919_100472333 82Ga0244775_100248032 83Ga0209615_1008268 84Ga0208923_10092461 85Ga0208133_11461821 86Ga0209188_10060138 87Ga0209087_10261104 88Ga0209596_10689302 89Ga0209296_100046632 90Ga0209088_100227902 91Ga0209134_103075242 92Ga0209086_100591231 93Ga0209191_13193723 94Ga0209079_102913582 95Ga0209298_100704121 96Ga0247723_10026322 97Ga0247723_10038832 98Ga0268283_11187294 99Ga0304730_11658322 100Ga0315293_100838763 101Ga0315909_102378484 102Ga0315904_104439251 103Ga0315901_103577842 104Ga0315274_120764062 105Ga0315903_109019911 106Ga0334722_100408372 107Ga0334722_103401231 108Ga0334987_0073555_2571_2723 109Ga0334987_0303357_917_1057 110Ga0335001_0085377_993_1217 111Ga0335058_0070020_309_479
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76. 1Water_1003682 2Ga0070749_106619542 3Ga0102862_10774051 4Ga0114966_103580435 5Ga0181350_10394575 6Ga0181346_10383241
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76. 1Water_1003682 2Ga0070749_106619542 3Ga0102862_10774051 4Ga0114966_103580435 5Ga0181350_10394575 6Ga0181346_10383241
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 89.09% β-sheet: 0.00% Coil/Unstructured: 10.91%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF00271	Helicase_C	36.94
PF10926	DUF2800	6.31
PF13539	Peptidase_M15_4	4.50
PF08291	Peptidase_M15_3	3.60
PF04851	ResIII	3.60
PF00152	tRNA-synt_2	0.90
PF03245	Phage_lysis	0.90
PF03237	Terminase_6N	0.90
PF00176	SNF2-rel_dom	0.90
PF13392	HNH_3	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0017	Aspartyl/asparaginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.90
COG0173	Aspartyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.90
COG1190	Lysyl-tRNA synthetase, class II	Translation, ribosomal structure and biogenesis [J]	0.90
COG2269	Elongation factor P--beta-lysine ligase (EF-P beta-lysylation pathway)	Translation, ribosomal structure and biogenesis [J]	0.90

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.46 %
Unclassified	root	N/A	40.54 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	9.01 %
Unclassified	root	N/A	40.54 %
Viruses	superkingdom	All Organisms → Viruses	50.45 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	9.01 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	47.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.70 %
Unclassified	root	N/A	40.54 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	47.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %
Unclassified	root	N/A	40.54 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.70 %
Unclassified	root	N/A	40.54 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	47.75 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	47.75 %
Neisseriales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	0.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.70 %
Unclassified	root	N/A	40.54 %

Name	Rank	Taxonomy	Distribution
Chromobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae	0.90 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	47.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.70 %
Unclassified	root	N/A	40.54 %

Name	Rank	Taxonomy	Distribution
Chromobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Chromobacterium group	0.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.70 %
Unclassified	root	N/A	40.54 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	47.75 %

Name	Rank	Taxonomy	Distribution
Chromobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Chromobacterium group → Chromobacterium	0.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.70 %
Unclassified	root	N/A	40.54 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	47.75 %

Name	Rank	Taxonomy	Distribution
Chromobacterium phragmitis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Chromobacterium group → Chromobacterium → Chromobacterium phragmitis	0.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.70 %
Unclassified	root	N/A	40.54 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	47.75 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002930\|Water_100368	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	10019	Open in IMG/M
3300003277\|JGI25908J49247_10000030	Not Available	34572	Open in IMG/M
3300003393\|JGI25909J50240_1091297	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300003499\|JGI25930J51415_1008299	All Organisms → Viruses → Predicted Viral	2142	Open in IMG/M
3300005580\|Ga0049083_10313751	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	524	Open in IMG/M
3300005581\|Ga0049081_10019490	Not Available	2575	Open in IMG/M
3300005582\|Ga0049080_10171446	Not Available	723	Open in IMG/M
3300006641\|Ga0075471_10251364	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300006802\|Ga0070749_10014693	Not Available	4993	Open in IMG/M
3300006802\|Ga0070749_10494762	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.20%
Terrestrial	Environmental → Terrestrial	1.80%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.80%
Freshwater	Environmental → Aquatic → Freshwater	86.49%
Marine	Environmental → Aquatic → Marine	10.81%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.90%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	5.41%
Creek	Environmental → Aquatic → Freshwater → Creek	0.90%
Ice	Environmental → Aquatic → Freshwater → Ice	0.90%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	3.60%
Lake	Environmental → Aquatic → Freshwater → Lake	33.33%
Lentic	Environmental → Aquatic → Freshwater → Lentic	41.44%
Lotic	Environmental → Aquatic → Freshwater → Lotic	1.80%
Pond	Environmental → Aquatic → Freshwater → Pond	0.90%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.90%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.90%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	6.31%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.80%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.80%

Habitat	Taxonomy	Distribution
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	2.70%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.90%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	4.50%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	41.44%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	28.83%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	6.31%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	5.41%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.80%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.90%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.90%
Unclassified	Environmental → Aquatic → Freshwater → Pond → Unclassified	0.90%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	0.90%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	2.70%
Aquatic	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Aquatic	0.90%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	5.41%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	1.80%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.80%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	1.80%
Estuary Water	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuary Water	0.90%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	5.41%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	4.50%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	3.60%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	1.80%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	1.80%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater	0.90%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	0.90%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	38.74%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	14.41%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.90%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.90%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	2.70%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.90%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	0.90%
Pond Fresh Water	Environmental → Aquatic → Freshwater → Pond → Unclassified → Pond Fresh Water	0.90%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	0.90%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.90%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	3.60%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002930	Estuary water microbial communities from Pearl Estuary, Zhujiang, China	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental	Open in IMG/M
3300003499	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.DN	Environmental	Open in IMG/M
3300005580	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300006641	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Water_1003682	3300002930	Estuary Water	MSIRFNNWKTQLKAEKSIHKIYQRDFNAAWRKLSKSMETIKKLENKIATHLATTK*
JGI25908J49247_1000003040	3300003277	Freshwater Lake	MSVRLNNWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMTLVKKLEDKVATHLAKIK*
JGI25909J50240_10912972	3300003393	Freshwater Lake	MSVRLNNWKTQLKAEKSIQKIYRRDHNAAWRKLSKSMALTKKLEDKIATHMAKIK*
JGI25930J51415_10082999	3300003499	Freshwater Lake	MSVRLNNWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMALTKKLEDKVATYLAKIK*
Ga0049083_103137513	3300005580	Freshwater Lentic	MSIRLNNWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMTLVKKLEDKVATHLAKIK*
Ga0049081_100194902	3300005581	Freshwater Lentic	MSVRLNNWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMALTKKLEDKIATHMAKIK*
Ga0049080_101714461	3300005582	Freshwater Lentic	MSVRLNNWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMTLVKKLEDKVATHLEKTK*
Ga0075471_102513643	3300006641	Aqueous	MSVRLNNWKTQLKAEKSIHKIYQRDFNAAWRKLSKNMDTIKKLEEKIASHMATTKQ*
Ga0070749_100146936	3300006802	Aqueous	MSVRLNNWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMALTKKLEDKVATYLAKTK*
Ga0070749_104947622	3300006802	Aqueous	MRLLKWKTQLKAEKSIHKIYQRDFNAAWRKLSKNMDTIKKLEEKIASHMATTKQ*
Ga0070749_106619542	3300006802	Aqueous	MRLLKWKTQLKAEKSIRKIYQRDFNAAWRKLSKNMNLIKQLEDKIANHLAKTKQ*
Ga0075464_100612888	3300006805	Aqueous	MSVRLNNWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMTLVKKLEDKVANHLAKIKQ*
Ga0075464_108742652	3300006805	Aqueous	MRLLKWKTQLKAEKSIRKIYQRDFNAAWRKLSKNMEMIKQLEDKIATHLAKTKQ*
Ga0102862_10774051	3300007670	Estuarine	RIGYCNGGVEMSVRLNNWKTQLKAEKSIQKIYRRDHNAAWRKLSKSMALTKKLENKIATHMAKIK*
Ga0114363_11869531	3300008266	Freshwater, Plankton	VGYCNGGVEMSVRLNNWKTQLKAEKSIQKIYRRDHNAAWRKLSKSMALTKKLEDKIATHMAKIK*
Ga0114876_12382951	3300008448	Freshwater Lake	EVRLLKWKTQLKAEKSIHKIYQRDFNAAWRKLSKSMETIKKLEDKIATHLASIKQ*
Ga0114966_103580435	3300009161	Freshwater Lake	GEFEMSVRLNNWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMTLVKKLEDKVANHLAKIKQ
Ga0114979_107480892	3300009180	Freshwater Lake	MSVRLNNWKTQLKAEKSIQKIYQRDFNAALRKLSKSITLAKKLEDKVANHLAKIKQ*
Ga0114959_100400695	3300009182	Freshwater Lake	MSVRLNNWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMTLVKKLEDKIATHLAKTK*
Ga0114974_105592032	3300009183	Freshwater Lake	MSVRLNNWKTQLKAEKSIRKIYQRDFNAAWRKLSKNMEMIKQLEDKIATHLAKTKQ*
Ga0114976_102838961	3300009184	Freshwater Lake	QLRAEKSINKIYQRDFNAAWRKLSKSMETIKKLEDKIATHLATTK*
Ga0114976_104081313	3300009184	Freshwater Lake	MSVRLNNWKTQLKAEKSIHKIYQRDFNAAWRKLSKSMETIKKLEDKIATHLAT
Ga0133913_106825669	3300010885	Freshwater Lake	MSVRLNNWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMTVSKKLEDKIATHLAKVK*
Ga0137575_100456971	3300010970	Pond Fresh Water	MRLLKWKTQLKAEKSIRKIYQRDFNATWRKLSKNMKLINQLEEKIANHLAKTKQ*
Ga0139557_10019223	3300011010	Freshwater	VRLNNWKTQLKAEKSIHKIYQRDFNAAWRKLSKSLKTIKQLEDKIATHLAKTE*
Ga0151515_1076725	3300011114	Freshwater	MRLLKWKTQLKAEKSIRKIYQRDFNAAWRKLSKNMSMIKQLEDKIANHLAKTKQ*
Ga0136709_10622942	3300011184	Freshwater	MSVRLNNWKTQLKAEKSIRKIYQRDFNATWRKLSKNMKLINQLEEKIANHLAKTKQ*
Ga0153697_15538	3300011334	Freshwater	VRLLKWKTQLKAEKSIHKIYQRDFNAAWRKLSKSVKTIKQLEDKIATHLATTK*
Ga0153703_121425	3300011336	Freshwater	MSVRLNNWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMALTKKLEDKVAAYLAKTK*
Ga0153799_10197651	3300012012	Freshwater	RGVGYCNGGTEMSVRLNNWKTQLKAEKSIQKIYRRDHNAAWRKLSKSMALTKKLEDKVATHLAKIK*
Ga0153799_10234532	3300012012	Freshwater	MSIRFNNWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMTLVKKLEDKVATHLAKIK*
Ga0177922_111932372	3300013372	Freshwater	MRLLKWKTQLKAEKSIHKIYQRDFNAAWRKLSKSMETIKKLEDKIATHLATTK*
Ga0119960_10109301	3300014811	Aquatic	MSVRLNNWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMTLVKKLEDKVANHLAKTKQ*
Ga0181338_10178751	3300015050	Freshwater Lake	VRLNNWKTQLKAEKSIHKIYQRDFNAAWRKLSKSLKTIKQLEVKIATHLAKIE*
Ga0181363_100121210	3300017707	Freshwater Lake	MSVRLNNWKTQLKAEKSIQKLYQRDFNAAWRKLSKSMALTKKLEDKVATYLAKIK
Ga0181350_10176037	3300017716	Freshwater Lake	VRLNNWKTQLKAEKSIHKIYQRDFNAAWRKLSKSLKTIKQLEVKIATHLAKIE
Ga0181350_10394575	3300017716	Freshwater Lake	IGYCNGGTEVRLNNWKTQLRAEKSINKIYQRDFNAAWRKLSKSMKTIKQLEDKIATHLATIEQRT
Ga0181350_10705575	3300017716	Freshwater Lake	MRLLKWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMPLVKKLEDKIATHLATTKQ
Ga0181347_10943571	3300017722	Freshwater Lake	MRLLKWKTQLKAEKSIHKIYQRDFNAAWRKLSKSMETIKKLEDKIATHL
Ga0181362_10807202	3300017723	Freshwater Lake	VRLNNWKTQLKAEKSIHKIYQRDFNAAWRKLSKSMETIKKLEDKIATHLATTK
Ga0181365_10637104	3300017736	Freshwater Lake	GGTEMSVRLNNWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMTLVKKLEDKVATHLAKIK
Ga0181365_11030381	3300017736	Freshwater Lake	MSVRLNNWKTQLKAEKSIQKIYQRDFNAACRKLSKSMTLVKKLEDKVATHLAKIK
Ga0181365_11061831	3300017736	Freshwater Lake	VRLNNWKTQLKAEKSIHKIYQRDFNAAWRKLSKSMETIKKLEDKIATHLATT
Ga0181352_10336454	3300017747	Freshwater Lake	MSVRLNNWKTQLKAEKSIHKIYQRDFNAAWRKLSKNMDTIKKLEAKIASHMATTKY
Ga0181352_11722851	3300017747	Freshwater Lake	MRLLKWKTQLKAEKSIHKIYQRDFNAAWRKLSKSMETIKKLEDKIAT
Ga0181344_10504131	3300017754	Freshwater Lake	RCVGYCYGGTEMRLLKWKTQLKAEKSIHKIYQRDFNAAWRKLSKSMETIKKLEDKIATHLATTK
Ga0181344_11170462	3300017754	Freshwater Lake	VRLNNWKTQLRAEKSINKIYQRDFNAAWRKLNKSMKTIKQLEDKIATHLAKIEQRT
Ga0181344_11983482	3300017754	Freshwater Lake	MSVRLNNWKTQLKAEKSIQKIYRRDHNAAWRKLSKSMTLSKKLEDKIATHLAKTK
Ga0181356_11060403	3300017761	Freshwater Lake	VRLNNWKTQLKAEKSIHKIYQRDFNAAWRKLNKSMKTIKKLEDKIATYLATTK
Ga0181343_11800752	3300017766	Freshwater Lake	MRLLKWKTQLKAEKSIRKIYQRDFNAAWRKLSKNMNMIKQLEDKIATHLAKTK
Ga0181358_10115176	3300017774	Freshwater Lake	MSIRLNNWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMTLVKKLEDKVATHLA
Ga0181358_11146662	3300017774	Freshwater Lake	MRLLKWKTQLKAEKSIYKIYQRDFNAAWRKLNKSLKTIKQLEDKIATHLATTK
Ga0181357_10254242	3300017777	Freshwater Lake	MSVRLNNWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMTLVKKLEDKVANYLAQIKQ
Ga0181357_10430673	3300017777	Freshwater Lake	MSVRLNNWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMTLVKKLEDKVATHLA
Ga0181349_10459942	3300017778	Freshwater Lake	VRLNNWKTQLRAEKSINKIYQRDFNAAWRKLSKSMKTIKRVEDKIATHLAKIKQGA
Ga0181349_11744751	3300017778	Freshwater Lake	TEMRLLKWKTQLKAEKSIHKIYQRDFNAAWRKLSKSLKTIKQLEVKIATHLAKIE
Ga0181349_12727292	3300017778	Freshwater Lake	MSIRLNNWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMTLVKKLEDKVATHLAK
Ga0181349_13165883	3300017778	Freshwater Lake	MRLLKWKTQLKAEKSIHKIYQRDLNAAWRKLSKSMETIKKLEDKIATHLATTKQ
Ga0181346_10383241	3300017780	Freshwater Lake	LKAEKSIQKIYQRDFNAAWRKLSKSMTLVKKLEDKIATHLEKTK
Ga0181346_10549321	3300017780	Freshwater Lake	MSVRLNNWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMTLVKKLEDKV
Ga0181346_11477481	3300017780	Freshwater Lake	GTEVRLNNWKTQLKAEKSIHKIYQRDFNAAWRKLSKSMETIKKLEDKIATYLATTK
Ga0181346_12676991	3300017780	Freshwater Lake	LKAEKSIQKIYQRDFNAAWRKLSKSMTLVKKLEDKIATHLAKTK
Ga0181346_13343041	3300017780	Freshwater Lake	MSIRFNNWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMTLVKKLEDKIATHL
Ga0181348_11432485	3300017784	Freshwater Lake	VEMSVRLNNWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMTLVKKLEDKVANYLAKIKQ
Ga0181361_1000645	3300019783	Freshwater Lake	MSVRLNNWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMTLVKKLEDKVATHLAKIK
Ga0181359_100567116	3300019784	Freshwater Lake	MSVRLNNWKTQLKAEKSIQKIYRRDHNAAWRKLSKSMALTKKLEDKIATHMAKIK
Ga0181359_10371947	3300019784	Freshwater Lake	MSIRFNNWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMTLVKKLEDKIATHLEKTK
Ga0181359_10998252	3300019784	Freshwater Lake	MSVRLNNWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMALTKKLEDKVATYLAKIK
Ga0181359_12026042	3300019784	Freshwater Lake	VRLNNWKTQLKAEKSIHKIYQRDFNAAWRKLNKSMKTIKQLEDKIATHLAKIE
Ga0207193_12665532	3300020048	Freshwater Lake Sediment	MSVRLNNWKTQLKAEKSIQKIYRRDHNAAWRKLSKSMALTKKLEDKIATHLAKTK
Ga0211734_109644442	3300020159	Freshwater	MRLLKWKTQLKAEKSIRKIYQRDFNAAWRKLSKNMNMIKQLEDKIANHLAKTKQ
Ga0211726_105228572	3300020161	Freshwater	MRLLKWKTQLKAEKSIHKIYQRDFNAAWRKLSKSVKTIKQLEDKVATHLAKIK
Ga0181556_11111092	3300020176	Salt Marsh	MSVRLNNWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMTLVKKLEDKVATHLAKI
Ga0194047_1000307113	3300021354	Anoxic Zone Freshwater	MSVRLNNWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMTLVKKLEDKVATHMAKIK
Ga0194047_100568519	3300021354	Anoxic Zone Freshwater	NWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMTLVKKLEDKVATHLAKTK
Ga0194047_104087003	3300021354	Anoxic Zone Freshwater	RYGEFEMSVRLNNWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMTLVKKLEDKIATHLAKT
Ga0213922_10710992	3300021956	Freshwater	MRLLKWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMTLVKKLEDKIATHLAKTK
Ga0181354_10497163	3300022190	Freshwater Lake	MRLLKWKTQLKAEKSIHKIYQRDFNAAWRKLSKSMETIKKLEDKIATYLATTK
Ga0181351_11016086	3300022407	Freshwater Lake	LKAEKSIQKIYRRDHNAAWRKLSKSMALTKKLEDKIATHMAKIK
Ga0181351_11838821	3300022407	Freshwater Lake	MSVRLNNWKTQLKAEKSIQKIYRRDHNAAWRKLSKSMALTKKLEDKIATHMAKI
Ga0214919_100472333	3300023184	Freshwater	MSIRLNNWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMTLSKKLEDKIAAHLAKTK
Ga0244775_100248032	3300024346	Estuarine	MSVRLNNWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMTLVKKLEDKVANHLAKIKQ
Ga0209615_1008268	3300025075	Freshwater	VRLNNWKTQLRAEKSINKIYQRDFNAAWRKLNKSMKTIKQLEEKIATHLATIEQRS
Ga0208923_10092461	3300027320	Estuarine	TRQARGVGYCNGGTEMSVRLNNWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMTLVKKLEDKVANHLAKIKQ
Ga0208133_11461821	3300027631	Estuarine	MSVRLNKWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMTLVKKLEDKVANHLAKIKQ
Ga0209188_10060138	3300027708	Freshwater Lake	MSVRLNNWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMTLVKKLEDKIATHLAKTK
Ga0209087_10261104	3300027734	Freshwater Lake	VRLLKWKTQLKAEKSIHKIYQRDFNAAWRKLSKSMETIKKLEDKIATHLATTK
Ga0209596_10689302	3300027754	Freshwater Lake	MSVRLNNWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMTLVKKLEDKVATHLAKTK
Ga0209296_100046632	3300027759	Freshwater Lake	VRLNNWKTQLRAEKSINKIYQRDFNAAWRKLNKSMKTIKQLEDKIATHLATIKQGA
Ga0209088_100227902	3300027763	Freshwater Lake	MSVRLNNWKTQLKAEKSIQKIYQRDFNAALRKLSKSITLAKKLEDKVANHLAKIKQ
Ga0209134_103075242	3300027764	Freshwater Lake	MSVRLNNWKTQLKAEKSIQKIYQRDFNAAWRKLYKSMTLTKKLEDKIATHLAKTK
Ga0209086_100591231	3300027770	Freshwater Lake	TQLKAEKSIQKIYQRDFNAAWRKLSKSMTLVKKLEDKVANHLAKIKQ
Ga0209191_13193723	3300027969	Freshwater Lake	RIGYCNGGTEVRLNNWKTQLRAEKSINKIYQRDFNAAWRKLNKSMKTIKQLEDKIATHLATIKQGA
Ga0209079_102913582	3300027972	Freshwater Sediment	MRLLKWKTQLKAEKSIQKIYRRDHNAAWRKLSKSMALTKKLEDKIATHMAKIK
Ga0209298_100704121	3300027973	Freshwater Lake	MSVRLNNWKTQLKAEKTIQKIYQRDFNAAWRKLSKSMTLVKKLEDKVANHLAKIKQ
Ga0247723_10026322	3300028025	Deep Subsurface Sediment	MRLLKWKTQLKAEKSIRKIYQRDFNAAWRKLSKNMNMIKQLEDKIATHLAKTKQ
Ga0247723_10038832	3300028025	Deep Subsurface Sediment	MSVRLNNWKTQLKAEKSIRKIYQRDFNATWRKLSKNMKLINQLEEKIANHLAKTKQ
Ga0268283_11187294	3300028283	Saline Water	TQLKAEKSIQKIYQRDFNAAWRKLSKSMTLVKKLEDKVATHLAKIK
Ga0304730_11658322	3300028394	Freshwater Lake	MSVRLNNWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMTLVKKLEDKVANYLAKIKQ
Ga0315293_100838763	3300031746	Sediment	MRLLKWKTQLKAEKSIHKIYQRDFNAAWRKLSKSLKTIKQLEDKIATHLAKTE
Ga0315909_102378484	3300031857	Freshwater	MSVRLNNWKTQLKAEKSIQKIYRRDYNAAWRKLSKSMALTKKLEDKIATHLAKIK
Ga0315904_104439251	3300031951	Freshwater	MSVRLNNWKTQLKAEKSIQKIYRRDHNAAWRKLSKSMALTKKLEDKIATHMA
Ga0315901_103577842	3300031963	Freshwater	MSVRLNNWKTQLKAEKSIQKIYRRDHNAAWRKLSKSMALTKKLEDKIATHLAKIK
Ga0315274_120764062	3300031999	Sediment	VRLNNWKTQLRAEKSINKIYQRDFNAAWRKLSKSMKTIKQLEDKIATHLAKIEQRT
Ga0315903_109019911	3300032116	Freshwater	EMSVRLNNWKTQLKAEKSIQKIYRRDYNAAWRKLSKSMALTKKLEDKIATHLAKIK
Ga0334722_100408372	3300033233	Sediment	MSIRLNNWKTQLKAEKSIQKIYQRDFNAAWRKLSKSMTLVKKLEDKVANHLAKIKQ
Ga0334722_103401231	3300033233	Sediment	MRLLKWKTQLKAEKSIHKIYQRDFNAAWRKLSKSLKTIKQLEDKIATHLAKT
Ga0334987_0073555_2571_2723	3300034061	Freshwater	KWKTQLKAEKSIRKIYQRDFNAAWRKLSKNMNMIKQLEDKIATHLAKTKQ
Ga0334987_0303357_917_1057	3300034061	Freshwater	MRLLKWKTQLKAEKSIRKIYQRDFNAAWRKLSKNMNMIKQLEDKIAT
Ga0335001_0085377_993_1217	3300034064	Freshwater	LGRATRQARGIGYCNGGVEMSVRLNNWKTQLKAEKSIQKIYRRDHNAAWRKLSKSMALTKKLEDKIATHMAKIK
Ga0335058_0070020_309_479	3300034121	Freshwater	MRLNNWKTQLRAEKSINKIYQRDFNAAWRKLSKSMETIKKLEDKIATHVATTKQGT

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F085598

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences