Metagenome Family F085560

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085560
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	55 residues
Representative Sequence	MVNIKKTKYTFLYRSRDGHYMRPESFLNINKGRTLSSSQLRALGITKVKLKDVRI
Number of Associated Samples	94
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	27.93 %
% of genes near scaffold ends (potentially truncated)	37.84 %
% of genes from short scaffolds (< 2000 bps)	82.88 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (80.180 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (36.036 % of family members)
Environment Ontology (ENVO)	Unclassified (66.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (72.973 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.28% β-sheet: 16.87% Coil/Unstructured: 63.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF03592	Terminase_2	8.11
PF08241	Methyltransf_11	0.90
PF03889	ArfA	0.90
PF03237	Terminase_6N	0.90
PF13392	HNH_3	0.90
PF00166	Cpn10	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG3728	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	8.11
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	0.90
COG3036	Stalled ribosome alternative rescue factor ArfA	Translation, ribosomal structure and biogenesis [J]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.18 %
All Organisms	root	All Organisms	19.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.18 %
cellular organisms	root	All Organisms → cellular organisms	17.12 %
Viruses	superkingdom	All Organisms → Viruses	2.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.18 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	17.12 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	1.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.18 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	13.51 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	1.80 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.18 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6.31 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4.50 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	1.80 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	1.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.18 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.60 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.70 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1.80 %
Vibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales	1.80 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	1.80 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.18 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	3.60 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	2.70 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	1.80 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.80 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1.80 %
Vibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae	1.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.18 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	3.60 %
unclassified Methylocystaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae	2.70 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1.80 %
Aphanizomenonaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae	1.80 %
Vibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio	1.80 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.18 %
Rhodospirillaceae bacterium TMED8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	3.60 %
Methylocystaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium	2.70 %
unclassified Vibrio	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → unclassified Vibrio	1.80 %
Aphanizomenon	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon	1.80 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1.80 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.18 %
Rhodospirillaceae bacterium TMED8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	3.60 %
Methylocystaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium	2.70 %
Vibrio sp. HI00D65	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → unclassified Vibrio → Vibrio sp. HI00D65	1.80 %
Aphanizomenon flos-aquae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae	1.80 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1.80 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.18 %
Rhodospirillaceae bacterium TMED8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	3.60 %
Methylocystaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium	2.70 %
Aphanizomenon flos-aquae WA102	isolate	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	1.80 %
Vibrio sp. HI00D65	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → unclassified Vibrio → Vibrio sp. HI00D65	1.80 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1.80 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001460\|JGI24003J15210_10035147	Not Available	1793	Open in IMG/M
3300002231\|KVRMV2_101147239	Not Available	563	Open in IMG/M
3300002242\|KVWGV2_10926569	Not Available	578	Open in IMG/M
3300002511\|JGI25131J35506_1014103	Not Available	1099	Open in IMG/M
3300005086\|Ga0072334_10290135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	1476	Open in IMG/M
3300005510\|Ga0066825_10322921	Not Available	568	Open in IMG/M
3300005512\|Ga0074648_1002804	Not Available	15355	Open in IMG/M
3300005611\|Ga0074647_1001783	Not Available	7974	Open in IMG/M
3300006027\|Ga0075462_10037210	Not Available	1560	Open in IMG/M
3300006735\|Ga0098038_1274243	Not Available	528	Open in IMG/M
3300006737\|Ga0098037_1159418	Not Available	754	Open in IMG/M
3300006738\|Ga0098035_1108486	Not Available	962	Open in IMG/M
3300006749\|Ga0098042_1178486	Not Available	513	Open in IMG/M
3300006752\|Ga0098048_1221759	Not Available	556	Open in IMG/M
3300006753\|Ga0098039_1131230	Not Available	858	Open in IMG/M
3300006753\|Ga0098039_1152427	Not Available	789	Open in IMG/M
3300006754\|Ga0098044_1045537	Not Available	1883	Open in IMG/M
3300006789\|Ga0098054_1284907	Not Available	592	Open in IMG/M
3300006790\|Ga0098074_1017174	Not Available	2232	Open in IMG/M
3300006790\|Ga0098074_1040964	Not Available	1318	Open in IMG/M
3300006793\|Ga0098055_1250709	Not Available	666	Open in IMG/M
3300006868\|Ga0075481_10071636	Not Available	1307	Open in IMG/M
3300006919\|Ga0070746_10173984	Not Available	1038	Open in IMG/M
3300006922\|Ga0098045_1029044	Not Available	1433	Open in IMG/M
3300006928\|Ga0098041_1040869	Not Available	1507	Open in IMG/M
3300006929\|Ga0098036_1092238	Not Available	932	Open in IMG/M
3300006990\|Ga0098046_1030982	Not Available	1309	Open in IMG/M
3300007963\|Ga0110931_1142838	Not Available	719	Open in IMG/M
3300007963\|Ga0110931_1259405	Not Available	516	Open in IMG/M
3300008050\|Ga0098052_1246366	Not Available	684	Open in IMG/M
3300008216\|Ga0114898_1020774	Not Available	2291	Open in IMG/M
3300008219\|Ga0114905_1025260	Not Available	2312	Open in IMG/M
3300008219\|Ga0114905_1121182	Not Available	891	Open in IMG/M
3300008952\|Ga0115651_1074492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	2621	Open in IMG/M
3300009001\|Ga0102963_1003203	Not Available	7239	Open in IMG/M
3300009149\|Ga0114918_10401563	Not Available	747	Open in IMG/M
3300009149\|Ga0114918_10639247	Not Available	560	Open in IMG/M
3300009172\|Ga0114995_10704758	Not Available	552	Open in IMG/M
3300009481\|Ga0114932_10109207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1718	Open in IMG/M
3300009481\|Ga0114932_10690028	Not Available	594	Open in IMG/M
3300009481\|Ga0114932_10707598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → unclassified Vibrio → Vibrio sp. HI00D65	586	Open in IMG/M
3300009505\|Ga0115564_10419164	Not Available	652	Open in IMG/M
3300009620\|Ga0114912_1023852	Not Available	1702	Open in IMG/M
3300009620\|Ga0114912_1118954	Not Available	626	Open in IMG/M
3300010149\|Ga0098049_1153391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	712	Open in IMG/M
3300010150\|Ga0098056_1066379	All Organisms → cellular organisms → Bacteria → Proteobacteria	1241	Open in IMG/M
3300011116\|Ga0151516_10524	Not Available	18621	Open in IMG/M
3300011118\|Ga0114922_10820137	Not Available	760	Open in IMG/M
3300012919\|Ga0160422_10324151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	951	Open in IMG/M
3300012920\|Ga0160423_10554802	Not Available	780	Open in IMG/M
3300012920\|Ga0160423_11010925	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	557	Open in IMG/M
3300012950\|Ga0163108_10097711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1869	Open in IMG/M
3300012953\|Ga0163179_11768977	Not Available	563	Open in IMG/M
(restricted) 3300013131\|Ga0172373_10822144	Not Available	542	Open in IMG/M
(restricted) 3300014720\|Ga0172376_10350048	Not Available	864	Open in IMG/M
(restricted) 3300014720\|Ga0172376_10753076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium	523	Open in IMG/M
3300017710\|Ga0181403_1039319	Not Available	994	Open in IMG/M
3300017718\|Ga0181375_1049173	Not Available	701	Open in IMG/M
3300017950\|Ga0181607_10289662	Not Available	924	Open in IMG/M
3300017951\|Ga0181577_10191807	Not Available	1370	Open in IMG/M
3300017951\|Ga0181577_10409236	All Organisms → cellular organisms → Bacteria → Proteobacteria	861	Open in IMG/M
3300018424\|Ga0181591_10514895	Not Available	870	Open in IMG/M
3300020365\|Ga0211506_1190345	Not Available	575	Open in IMG/M
3300020410\|Ga0211699_10075846	All Organisms → cellular organisms → Bacteria → Proteobacteria	1243	Open in IMG/M
3300020467\|Ga0211713_10491881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	596	Open in IMG/M
3300021425\|Ga0213866_10556193	Not Available	540	Open in IMG/M
3300022061\|Ga0212023_1001024	Not Available	2622	Open in IMG/M
3300022063\|Ga0212029_1014579	All Organisms → Viruses → Predicted Viral	1008	Open in IMG/M
3300022065\|Ga0212024_1097106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	525	Open in IMG/M
3300022072\|Ga0196889_1006877	Not Available	2599	Open in IMG/M
3300022836\|Ga0222654_1019918	Not Available	1352	Open in IMG/M
3300024262\|Ga0210003_1236898	Not Available	728	Open in IMG/M
3300024344\|Ga0209992_10278988	Not Available	687	Open in IMG/M
3300024433\|Ga0209986_10009759	Not Available	7340	Open in IMG/M
3300024433\|Ga0209986_10175320	Not Available	1089	Open in IMG/M
(restricted) 3300024520\|Ga0255047_10236607	Not Available	927	Open in IMG/M
3300025050\|Ga0207892_1012274	Not Available	912	Open in IMG/M
3300025069\|Ga0207887_1049699	Not Available	683	Open in IMG/M
3300025070\|Ga0208667_1004185	Not Available	4142	Open in IMG/M
3300025093\|Ga0208794_1013770	Not Available	1862	Open in IMG/M
3300025101\|Ga0208159_1104153	Not Available	501	Open in IMG/M
3300025108\|Ga0208793_1005584	Not Available	5623	Open in IMG/M
3300025108\|Ga0208793_1066421	Not Available	1071	Open in IMG/M
3300025108\|Ga0208793_1192089	Not Available	516	Open in IMG/M
3300025109\|Ga0208553_1117425	Not Available	605	Open in IMG/M
3300025110\|Ga0208158_1018953	Not Available	1814	Open in IMG/M
3300025110\|Ga0208158_1154835	Not Available	519	Open in IMG/M
3300025141\|Ga0209756_1032347	Not Available	2787	Open in IMG/M
3300025168\|Ga0209337_1078914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1601	Open in IMG/M
3300025251\|Ga0208182_1075353	Not Available	645	Open in IMG/M
3300025267\|Ga0208179_1006589	Not Available	4217	Open in IMG/M
3300025274\|Ga0208183_1069049	Not Available	679	Open in IMG/M
3300025286\|Ga0208315_1019645	Not Available	2131	Open in IMG/M
3300025305\|Ga0208684_1038881	Not Available	1362	Open in IMG/M
3300025425\|Ga0208646_1056868	Not Available	708	Open in IMG/M
3300025610\|Ga0208149_1038687	Not Available	1275	Open in IMG/M
3300025652\|Ga0208134_1180360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → unclassified Vibrio → Vibrio sp. HI00D65	507	Open in IMG/M
3300025873\|Ga0209757_10007842	Not Available	2786	Open in IMG/M
3300026183\|Ga0209932_1052852	Not Available	973	Open in IMG/M
(restricted) 3300027730\|Ga0247833_1078889	Not Available	1561	Open in IMG/M
(restricted) 3300027977\|Ga0247834_1259968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium	619	Open in IMG/M
3300028022\|Ga0256382_1046965	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	999	Open in IMG/M
(restricted) 3300028044\|Ga0247838_1159493	Not Available	851	Open in IMG/M
(restricted) 3300028557\|Ga0247832_1058800	Not Available	1919	Open in IMG/M
(restricted) 3300028557\|Ga0247832_1163506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium	838	Open in IMG/M
(restricted) 3300028559\|Ga0247831_1318752	Not Available	510	Open in IMG/M
3300029318\|Ga0185543_1036326	Not Available	1093	Open in IMG/M
3300029448\|Ga0183755_1094983	Not Available	600	Open in IMG/M
3300029787\|Ga0183757_1005111	All Organisms → cellular organisms → Bacteria	4415	Open in IMG/M
3300029787\|Ga0183757_1041447	Not Available	865	Open in IMG/M
3300031566\|Ga0307378_10116855	All Organisms → cellular organisms → Bacteria	2748	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.10%
Terrestrial	Environmental → Terrestrial	0.90%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	83.78%
Freshwater	Environmental → Aquatic → Freshwater	9.01%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	5.41%
Unclassified	Environmental → Aquatic → Unclassified	0.90%
Soil	Environmental → Terrestrial → Soil	0.90%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	54.95%
Coastal	Environmental → Aquatic → Marine → Coastal	9.91%
Lake	Environmental → Aquatic → Freshwater → Lake	9.01%
Unclassified	Environmental → Aquatic → Marine → Unclassified	6.31%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	5.41%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	3.60%
Volcanic	Environmental → Aquatic → Marine → Volcanic	3.60%
Pelagic	Environmental → Aquatic → Marine → Pelagic	1.80%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	1.80%
Inlet	Environmental → Aquatic → Marine → Inlet	0.90%
Strait	Environmental → Aquatic → Marine → Strait	0.90%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.90%
Clay	Environmental → Terrestrial → Soil → Clay	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	45.95%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	9.91%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	9.01%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	6.31%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	5.41%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	4.50%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	3.60%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	3.60%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	3.60%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	1.80%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	1.80%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	0.90%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.90%
Epilimnion	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion	0.90%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.90%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	36.04%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	9.01%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	8.11%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	8.11%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	6.31%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	5.41%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	3.60%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	3.60%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	1.80%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	1.80%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	1.80%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	1.80%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.90%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.90%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.90%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.90%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.90%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	0.90%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.90%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.90%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	0.90%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	0.90%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water And Sediment	0.90%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment	0.90%
Water	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Water	0.90%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300002231	Marine sediment microbial communities from Santorini caldera mats, Greece - red mat	Environmental	Open in IMG/M
3300002242	Marine sediment microbial communities from Kolumbo Volcano mats, Greece - white/grey mat	Environmental	Open in IMG/M
3300002511	Marine viral communities from the Pacific Ocean - ETNP_2_1000	Environmental	Open in IMG/M
3300005086	Microbial Community from Halfdan Field MHDA3	Environmental	Open in IMG/M
3300005510	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV45	Environmental	Open in IMG/M
3300005512	Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_water	Environmental	Open in IMG/M
3300005611	Saline surface water microbial communities from Etoliko Lagoon, Greece	Environmental	Open in IMG/M
3300006027	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental	Open in IMG/M
3300006749	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006790	Marine viral communities from the Gulf of Mexico - 32_GoM_OMZ_CsCl metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006868	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300006922	Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG	Environmental	Open in IMG/M
3300006928	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG	Environmental	Open in IMG/M
3300006929	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG	Environmental	Open in IMG/M
3300006990	Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG	Environmental	Open in IMG/M
3300007963	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)	Environmental	Open in IMG/M
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental	Open in IMG/M
3300008216	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar	Environmental	Open in IMG/M
3300008219	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05	Environmental	Open in IMG/M
3300008952	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 250-2.7um	Environmental	Open in IMG/M
3300009001	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG	Environmental	Open in IMG/M
3300009149	Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG	Environmental	Open in IMG/M
3300009172	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154	Environmental	Open in IMG/M
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental	Open in IMG/M
3300009505	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523	Environmental	Open in IMG/M
3300009620	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51	Environmental	Open in IMG/M
3300010149	Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG	Environmental	Open in IMG/M
3300010150	Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG	Environmental	Open in IMG/M
3300011116	Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2015Nov	Environmental	Open in IMG/M
3300011118	Deep subsurface microbial communities from Aarhus Bay to uncover new lineages of life (NeLLi) - Aarhus_00045 metaG	Environmental	Open in IMG/M
3300012919	Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaG	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300012950	Marine microbial communities from the Central Pacific Ocean - Fk160115 155m metaG	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300013131 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10m	Environmental	Open in IMG/M
3300014720 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_35m	Environmental	Open in IMG/M
3300017710	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28	Environmental	Open in IMG/M
3300017718	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_11 viral metaG	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020365	Marine microbial communities from Tara Oceans - TARA_B100000034 (ERX555943-ERR599143)	Environmental	Open in IMG/M
3300020410	Marine microbial communities from Tara Oceans - TARA_B100000519 (ERX555959-ERR599148)	Environmental	Open in IMG/M
3300020467	Marine microbial communities from Tara Oceans - TARA_B100000945 (ERX555966-ERR598957)	Environmental	Open in IMG/M
3300021425	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284	Environmental	Open in IMG/M
3300022061	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v2)	Environmental	Open in IMG/M
3300022063	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v2)	Environmental	Open in IMG/M
3300022065	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v2)	Environmental	Open in IMG/M
3300022072	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3)	Environmental	Open in IMG/M
3300022836	Saline water microbial communities from Ace Lake, Antarctica - #421	Environmental	Open in IMG/M
3300024262	Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes)	Environmental	Open in IMG/M
3300024344	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)	Environmental	Open in IMG/M
3300024433	Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG (SPAdes)	Environmental	Open in IMG/M
3300024520 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_1	Environmental	Open in IMG/M
3300025050	Marine viral communities from the Pacific Ocean - LP-54 (SPAdes)	Environmental	Open in IMG/M
3300025069	Marine viral communities from the Pacific Ocean - LP-38 (SPAdes)	Environmental	Open in IMG/M
3300025070	Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025093	Marine viral communities from the Gulf of Mexico - 32_GoM_OMZ_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025101	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG (SPAdes)	Environmental	Open in IMG/M
3300025108	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)	Environmental	Open in IMG/M
3300025109	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)	Environmental	Open in IMG/M
3300025110	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG (SPAdes)	Environmental	Open in IMG/M
3300025141	Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)	Environmental	Open in IMG/M
3300025168	Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)	Environmental	Open in IMG/M
3300025251	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)	Environmental	Open in IMG/M
3300025267	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar (SPAdes)	Environmental	Open in IMG/M
3300025274	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51 (SPAdes)	Environmental	Open in IMG/M
3300025286	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215 (SPAdes)	Environmental	Open in IMG/M
3300025305	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05 (SPAdes)	Environmental	Open in IMG/M
3300025425	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK8 (SPAdes)	Environmental	Open in IMG/M
3300025610	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025652	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)	Environmental	Open in IMG/M
3300025873	Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)	Environmental	Open in IMG/M
3300026183	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300027730 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_8m	Environmental	Open in IMG/M
3300027977 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_12m	Environmental	Open in IMG/M
3300028022	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750m	Environmental	Open in IMG/M
3300028044 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_15m	Environmental	Open in IMG/M
3300028557 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_4m	Environmental	Open in IMG/M
3300028559 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_1m	Environmental	Open in IMG/M
3300029318	Marine giant viral communities collected during Tara Oceans survey from station TARA_038 - TARA_Y100000289	Environmental	Open in IMG/M
3300029448	Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082	Environmental	Open in IMG/M
3300029787	Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172	Environmental	Open in IMG/M
3300031566	Soil microbial communities from Risofladan, Vaasa, Finland - UN-1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24003J15210_100351472	3300001460	Marine	MIKHKTKYTFMYQAADGHLMRPESFLNINKGRTLSKSQLRMLHITKVSSKSVXX*
KVRMV2_1011472393	3300002231	Marine Sediment	MENTKKTKYTFMYRSRDGHYMRPESFLNINKGRTLSSSQLRALGITKVKLKDVRI*
KVWGV2_109265692	3300002242	Marine Sediment	MVNIKTKYTFVYRSADGYYMRPESFLNINKGRTLSSSQLRALGITKVKLKDVRI*
JGI25131J35506_10141032	3300002511	Marine	MENTRKTKYTFMYRSAEGHLMRPESFLNINKGRTLSSSQLRVLGITKVKLKDVRI*
Ga0072334_102901352	3300005086	Water	MIKHKTKYTFMYQAADGHLMRPESFLNINKGRTLSKSQLRMLGITKVSSKGIKY*
Ga0066825_103229211	3300005510	Marine	MIKHQTKYTFLYRSWDGHLMRPESFLNINKGRTLSKSQLRMLGITKVKLKEIKQYGKH*
Ga0074648_10028047	3300005512	Saline Water And Sediment	MKKTNYSFYYRSRDGHIMRPESFLNINKGRTLSGVQLRALGITKIKKEEVDNEQKK*
Ga0074647_10017832	3300005611	Saline Water And Sediment	MKKTNYSFYYRSRDGHIMRPESFLNINKGRTLSGVQLRALGITKIKKEEVDNEQKR*
Ga0075462_100372101	3300006027	Aqueous	MENTKYTFLYRSSCGHLMRPESFLNINKGRTLSGRQLRMLGITKVKLKDVKR*
Ga0098038_12742431	3300006735	Marine	MVNIKKTKYTFLYRSRDGHYMRPESFLNINKGRTLSSSQLRTLGITKVKLKDVRI*
Ga0098037_11594181	3300006737	Marine	MANTRYTFLYRSADGHLMRPESFLNINKGRTLSKSQLRMLGITKVKLKEIKQYGKH*
Ga0098035_11084862	3300006738	Marine	MYHMVNIKTRYTFVYRSRDGHYMRPESFLNINKGRTLSSSQLRVLGIKKVKLKDVRI*
Ga0098042_11784861	3300006749	Marine	MANTRYTFLYRSADGHLMRPESFLNINKGRTLSKSQLRMLGIKKVKLKEIKQ*
Ga0098048_12217591	3300006752	Marine	KKTKYTFLYRSRDGHYMRPESFLNINKGRTLSSSQLRALGITKVKLKDVRI*
Ga0098039_11312302	3300006753	Marine	MVNTRKTKYTFMYRSRDGHYMRPESFLNINKGRTLSSSQLRVLGITKVKLKDVRV*
Ga0098039_11524272	3300006753	Marine	MENTRKTKYTFMYRSADGHLMRPESFLNINKGRTLSSSQLRVLGITKVKLKDVRI*
Ga0098044_10455371	3300006754	Marine	MYHMVNIKTRYTFVYRSRDGHYMRPESFLNINKGRTLSSSQLRVLGITKVKLKDVRI*
Ga0098054_12849072	3300006789	Marine	MENIKTRYTFVYRSRDGHYMRPESFLNINKGRTLSSSQLRVLGITKVKLKDVSVQAS*
Ga0098074_10171745	3300006790	Marine	MASIKKTRYTFLYRAHDGSIMRPESFLNINKGRTLSSSQLRMLGITKIPKTHCHVKGKEQRAGSIPPALKQK*
Ga0098074_10409642	3300006790	Marine	MANIKKTKYTFMYRSRDGHYMRPESFLNINKGRTLSSSQLRMLGITKVKLKNVQAS*
Ga0098055_12507092	3300006793	Marine	MANTRYTFLYQSADGHLMRPESFLNINKGRTLSKSQLRMLGIRKVKLKETKQ*
Ga0075481_100716361	3300006868	Aqueous	MIRESKYTFLYKSADGNLMRPESFLNINKGRTLSASQLRALGITKVKNES
Ga0070746_101739843	3300006919	Aqueous	MANTRYTFLYRSADGHLMRPESFLNINKGRTLSGRQLRMLGITKVKLKDVK
Ga0098045_10290442	3300006922	Marine	MVNTKKTKYTFMYKSRDGHYMRPESFLNINKGRTLSSSQLRFLGITKVKLKDVRI*
Ga0098041_10408691	3300006928	Marine	TKYTFLYRSRDGHYMRPESFLNINKGRTLSSSQLRALGITKVKLKDVRI*
Ga0098036_10922382	3300006929	Marine	MVNTRKTKYTFMYRSRDGHYMRPESFLNINKGRTLSSSQLRTLGITKVKLKDVRI*
Ga0098046_10309821	3300006990	Marine	MVNTKKTKYTFMYRSSCGHLMRPESFLNINKGRTLSSSQLRFLGITKVKLKDVRI*
Ga0110931_11428381	3300007963	Marine	KYTFLYRSRDGHYMRPESFLNINKGRTLSSSQLRALGITKVKLKDVRI*
Ga0110931_12594052	3300007963	Marine	NIKKTKYTFLYRSRDGHYMRPESFLNINKGRTLSSSQLRALGITKVKLKDVRI*
Ga0098052_12463662	3300008050	Marine	MVNTRKTKYTFMYRSADGHLMRPESFLNINKGRTLSSSQLRVLGITKVKLKDVRI*
Ga0114898_10207741	3300008216	Deep Ocean	MVNTRKTKYTFMYRSRDGHYMRPESFLNINKGRTLSSSQLRALGITKVKLKDVRI*
Ga0114905_10252602	3300008219	Deep Ocean	MVNIKKTKYTFMYRSRDGHYMRPESFLNINKGRTLSSSQLRVLGITKVKLKDVRI*
Ga0114905_11211821	3300008219	Deep Ocean	MASIKKTRYTFLYQAHDGSIMRPESFLNINKGRTLSSSQLRMLGITKIPNKEQRAGSIPPALKQK*
Ga0115651_10744923	3300008952	Marine	MVNTKKTRYTFLYRSRDGHYMRPESFLNINKGRTLSSSQLRVLGITKVKLKDVSIQTP*
Ga0102963_100320316	3300009001	Pond Water	MIKHKTKYTFMYRSSCGHLMRPESFLNINKGRTLSSSQLRALGITKVKLKDVRI*
Ga0114918_104015632	3300009149	Deep Subsurface	MKKTKYTFIYRSRDGHLMRPESFLNINKGRTLSSSQLRMLGITKIKASSVNH*
Ga0114918_106392471	3300009149	Deep Subsurface	INMKKTKYTFMYRSRDGHLMRPESFLNINKGRTLSSSQLRALGITKIKASSVKH*
Ga0114995_107047581	3300009172	Marine	KTKYTFMYQAADGHLMRPESFLNINKGRTLSKSQLRMLHITKVSSKSVKY*
Ga0114932_101092073	3300009481	Deep Subsurface	MIKHKTKYTFMYQAADGHLMRPESFLNINKGRTLSKSQLRMLGITKVSSKGVKY*
Ga0114932_106900281	3300009481	Deep Subsurface	ENAGTKKFKPWYMVNTRKTKYTFMYRSKDGHYMRPESFLNINKGRTLSGSQLRALGITKVKLKDVCI*
Ga0114932_107075981	3300009481	Deep Subsurface	NAGMPQLRQLNMVNIKKTKYTFMYRSRDGHYMRPESFLNINKGRTLSSSQLRVLGITKVKLKDVRI*
Ga0115564_104191643	3300009505	Pelagic Marine	GTKEFKPWYMVNTKKTKYTFLYRSRDGHYMRPESFLNINKGRTLSSSQLRMLGITKVKLKDARI*
Ga0114912_10238527	3300009620	Deep Ocean	GTRLLKILNMVNTRKTKYTFMYRSRDGHYMRPESFLNINKGRTLSSSQLRALGITKVKLKDVRI*
Ga0114912_11189541	3300009620	Deep Ocean	MQNTKKTKYTFMYRSADGHLMRPESFLNINKGRTLSSSQLRILGITKIKLKDACNITYAKH*
Ga0098049_11533911	3300010149	Marine	TFMYKSRDGHYMRPESFLNINKGRTLSSSQLRLLGITKVKLNEKN*
Ga0098056_10663794	3300010150	Marine	VNIKKTKYTFLYRSRDGHYMRPESFLNINKGRTLSSSQLRVLGITKVKLKDVCI*
Ga0151516_105244	3300011116	Freshwater	MKESKYTFLYKTACGSLMRPESFINVNSGRTLSSSQLKALNITKVKNERKRPR*
Ga0114922_108201372	3300011118	Deep Subsurface	MLKHKTKYTFMYQAADGHLMRPESFLNINKGRTLSKSQLRMLGITKVSSKGIKY*
Ga0160422_103241511	3300012919	Seawater	YTFLYRSADGHLMRPESFLNINKGRTLSGRQLRMLGITKVKLKDVKR*
Ga0160423_105548022	3300012920	Surface Seawater	MVNIKKTKYTFVYRSADGYYMRPESFLNINKGRTLSSSQLRALGITKVKLKDVRI*
Ga0160423_110109251	3300012920	Surface Seawater	MKKTKYTFMYRSSCGHLMRPESFLNINKGRTLSSSQLRALGITKVKTNGLV
Ga0163108_100977116	3300012950	Seawater	QNQLRMYHMVNIKTRYTFVYRSRDGHYMRPESFLNINKGRTLSSSQLRVLGITKVKLKDVRI*
Ga0163179_117689772	3300012953	Seawater	MVNTKKTKYTFMYRSRDGHYMRPESFLNISKGGTLSSSQLRALGITKVKLK
(restricted) Ga0172373_108221441	3300013131	Freshwater	MKESKYTFLYKSRDGHIMRPESFLNINKGRTLSSSQLRALGITKIKNESNRIK*
(restricted) Ga0172376_103500483	3300014720	Freshwater	MKQSQYTFLYKARDGHIMRPESFLNINKGRTLSSSQLRALGITKIKNETIKKTRI*
(restricted) Ga0172376_107530763	3300014720	Freshwater	MKESKYTFLYKSKDGHIMRPESFLNINKGRTLSSSQLRALGITKIKNESNRIR
Ga0181403_10393193	3300017710	Seawater	MVNTRKTKYTFMYRSRDGHYMRPESFLNINKGRTLSSSQLRALGITKVKLKDV
Ga0181375_10491731	3300017718	Marine	MVNTRKTKYTFMYRSADGHLMRPESFLNINKGRTLSSSQLRVLGITKVKLKDVRV
Ga0181607_102896623	3300017950	Salt Marsh	MENTKYTFLYRSSCGHLMRPESFLNINKGRTLSGRQLRMLGITKVKLKDVKR
Ga0181577_101918071	3300017951	Salt Marsh	MASIKKTRYTFLYRAHDGSIMRPESFLNINKGRTLSSSQLRMLGITKIPKTHCHVKGKEQRAGSIPPALKQK
Ga0181577_104092363	3300017951	Salt Marsh	GIKKLKVLYMVNIKTRYTFVYRSRDGHYMRPESFLNINKGRTLSSSQLRVLGITKVKLKDVRI
Ga0181591_105148951	3300018424	Salt Marsh	VIRESKYSFLYQAHDGSIMRPESFLNINKGRTLSSSQLRALGITKVKLKDVRI
Ga0211506_11903453	3300020365	Marine	MVNTRYTFLYRSADGHLMRPESFLNINKGRTLSKSQLRMLGITKVKLTGAS
Ga0211699_100758462	3300020410	Marine	MVNTKKTKYTFMYRSADGHYMRPESFLNINKGRTLSSSQLRLLGITKVKLKDVPRI
Ga0211713_104918811	3300020467	Marine	MEPRDGQHMELNTRYTFLYRSADGHLMRPESFLNINKGRTLSGRQLRMLGITKVKLKDVKRDPF
Ga0213866_105561932	3300021425	Seawater	ASIKKTRYTFLYKAHDGSIMRPESFLNINKGRTLSSSQLRMLGITKIPNKEQRAGSIPPALKLK
Ga0212023_10010241	3300022061	Aqueous	MIKHKTKYTFMYQAADGHLMRPESFLNINKGRTLSKSQLRMLGITKVSSKGIKY
Ga0212029_10145794	3300022063	Aqueous	MKKTNYSFYYRSRDGHIMRPESFLNINKGRTLSGVQLRALGITKIKKEEVNNEQKNKSIR
Ga0212024_10971061	3300022065	Aqueous	LIMIKHKTKYTFMYQAADGHLMRPESFLNINKGRTLSKSQLRMLGITKVSSKGIKY
Ga0196889_10068775	3300022072	Aqueous	MYQAADGHLMRPESFLNINKGRTLSKSQLRMLGITKVSSKGIKY
Ga0222654_10199183	3300022836	Saline Water	MKKTKYTFMYRSRDGHLMRPESFLNINKGRTLSSSQLRMLGITKIKASSAKH
Ga0210003_12368981	3300024262	Deep Subsurface	MYQAADGHLMRPESFLNINKGRTLSKSQLRMLHITKVSSKGIKY
Ga0209992_102789882	3300024344	Deep Subsurface	MIKHKTKYTFMYQAADGHLMRPESFLNINKGRTLSKSQLRMLGITKVSSKGVKY
Ga0209986_100097596	3300024433	Deep Subsurface	MVNTRKTKYTFMYRSRDGHYMRPESFLNINKGRTLSSSQLRALGITKVKLKDARI
Ga0209986_101753201	3300024433	Deep Subsurface	MASIKKTRYTFLYRANDGSIMRPESFLNINKGRTLSSSQLRMLGITKIPNKEQRAGSIPPALKQK
(restricted) Ga0255047_102366072	3300024520	Seawater	MASTKKTKYTFMYRSRDGHYMRPESFLNINKGRTLSSSQLRVLGITKVK
Ga0207892_10122742	3300025050	Marine	MENTRKTKYTFMYRSADGHLMRPESFLNINKGRTLSSSQLRVLGITKVKLKDVRI
Ga0207887_10496992	3300025069	Marine	MENTRKTKYTFMYRSADGHLMRPESFLNINKGRTLSSSQLLVLGITKVKLKDV
Ga0208667_10041852	3300025070	Marine	MVNIKKTKYTFLYRSRDGHYMRPESFLNINKGRTLSSSQLRVLGITKVKLKDVCI
Ga0208794_10137703	3300025093	Marine	MANIKKTKYTFMYRSRDGHYMRPESFLNINKGRTLSSSQLRMLGITKVKLKNVQAS
Ga0208159_11041531	3300025101	Marine	MANTRYTFLYRSADGHLMRPESFLNINKGRTLSKSQLRMLGIRKVKLKEIKQ
Ga0208793_10055842	3300025108	Marine	MVNTKKTKYTFMYKSRDGHYMRPESFLNINKGRTLSSSQLRLLGITKVKLKDVRI
Ga0208793_10664211	3300025108	Marine	MENIKTRYTFVYRSRDGHYMRPESFLNINKGRTLSSSQLRLLGITKVKL
Ga0208793_11920891	3300025108	Marine	MENIKTRYTFVYKSRDGHYMRPESFLNINKGRTLSSSQLRLLGITKVKLKDARI
Ga0208553_11174251	3300025109	Marine	MVNTRKTKYTFMYRSRDGHYMRPESFLNINKGRTLSSSQLRVLGITKVKLKDVRV
Ga0208158_10189537	3300025110	Marine	MVNIKKTKYTFLYRSRDGHYMRPESFLNINKGRTLSSSQLRALGITKVKLKDVRI
Ga0208158_11548351	3300025110	Marine	NMVNIKKTKYTFLYRSRDGHYMRPESFLNINKGRTLSSSQLRALGITKVKLKDVRI
Ga0209756_10323479	3300025141	Marine	MENIKTRYTFVYRSRDGHYMRPESFLNINKGRTLSSSQLRVLGITKVKLKDVSVQAS
Ga0209337_10789142	3300025168	Marine	MYQAADGHLMRPESFLNINKGRTLSKSQLRMLHITKVSSKSVKY
Ga0208182_10753532	3300025251	Deep Ocean	MENTRKTKYTFMYRSADGHLMRPESFLNINKGRTLSSSQLRVLGITKVKLKDV
Ga0208179_10065893	3300025267	Deep Ocean	MVNTRKTKYTFMYRSRDGHYMRPESFLNINKGRTLSSSQLRALGITKVKLKDVRI
Ga0208183_10690491	3300025274	Deep Ocean	FMYRSADGHLMRPESFLNINKGRTLSSSQLRVLGITKVKLKDVRI
Ga0208315_10196452	3300025286	Deep Ocean	MVNTRKTKYTFMYRSADGHLMRPESFLNINKGRTLSSSQLRVLGITKVKLKDVRI
Ga0208684_10388811	3300025305	Deep Ocean	TFMYRSRDGHYMRPESFLNINKGRTLSSSQLRVLGITKVKLKDVRI
Ga0208646_10568681	3300025425	Saline Lake	MVNTKKTKYTFMYRSRDGHLMRPESFLNINKGRTLSSSQLRALGITKIKASS
Ga0208149_10386871	3300025610	Aqueous	MIKHKTKYTFMYRSADGHYMRPESFLNINKGRTLSSSQLRALGITKVR
Ga0208134_11803602	3300025652	Aqueous	LTLKILNMVNTRKTKYTFMYRSRDGHYMRPESFLNINKGRTLSSSQLRALGITKVKLKDVRI
Ga0209757_100078423	3300025873	Marine	MENTRKTKYTFMYRSAEGHLMRPESFLNINKGRTLSSSQLRVLGITKVKLKDVRI
Ga0209932_10528522	3300026183	Pond Water	MIKHKTKYTFMYRSSCGHLMRPESFLNINKGRTLSSSQLRALGITKVKLKDVRI
(restricted) Ga0247833_10788892	3300027730	Freshwater	MKESKYTFLYKARDGHIMRPESFLNINKGRTLSSSQLRALGITKIKNESNRIR
(restricted) Ga0247834_12599684	3300027977	Freshwater	MKESKYTFLYKARDGHIMRPESFLNINKGRTLSSSQLRALGITKIKNESN
Ga0256382_10469652	3300028022	Seawater	MASIKKTRYTFLYQAHDGSIMRPESFLNINKGRTLSSSQLRMLGITKIPNKEQRAGSIPPALKQK
(restricted) Ga0247838_11594932	3300028044	Freshwater	MKESKYTFLYKSRDGHIMRPESFLNINKGRTLNSSQLRALGITKIKNENNRIR
(restricted) Ga0247832_10588001	3300028557	Freshwater	KESKYTFLYKARDGHIMRPESFLNINKGRTLSSSQLRALGITKIKNESNRTR
(restricted) Ga0247832_11635061	3300028557	Freshwater	MKESKYTFLYKARDGHIMRPESFLNINKGRTLSSSQLRALGITKIKNESNR
(restricted) Ga0247831_13187522	3300028559	Freshwater	YKARDGHIMRPESFLNINKGRTLSSSQLRALGITKIKNESNRVR
Ga0185543_10363263	3300029318	Marine	NTRYTFLYRSADGHLMRPESFLNINKGRTLSKSQLRALGITKVKLKGASASVQARKGARIQA
Ga0183755_10949832	3300029448	Marine	MVNTKKTKYTFMYRSADGHYMRPESFLNINKGRTLSSSQLRALGITKVKLKD
Ga0183757_10051113	3300029787	Marine	LIMIKHKTKYTFMYQAADGHLMRPESFLNINKGRTLSKSQLRMLGITKVSSKGVKY
Ga0183757_10414472	3300029787	Marine	MASIKKTRYTFLYQAHDGSIMRPESFLNINKGRTLSSSQLRMLGITKIPNKEQRA
Ga0307378_101168551	3300031566	Soil	MIKHKTKYTFMYQAADGHLMRPESFLNINKGRTLSKSQLRMLHITKVSSKGIKY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters