Metagenome / Metatranscriptome Family F085491

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085491
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	104 residues
Representative Sequence	MNDSVRERIVRNNYTFREANEQIRARADEYDAPIERIPFLCECPVPSCTEVLRLTMAEYSDVRAHPDHFFTAPGHEQADAVVAHVVSREEGYVVVEKEEGVPEQ
Number of Associated Samples	82
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	37.84 %
% of genes near scaffold ends (potentially truncated)	50.45 %
% of genes from short scaffolds (< 2000 bps)	86.49 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (57.658 % of family members)
Environment Ontology (ENVO)	Unclassified (45.946 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (68.468 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.79% β-sheet: 18.18% Coil/Unstructured: 53.03%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF03861	ANTAR	39.64
PF13472	Lipase_GDSL_2	9.01
PF01381	HTH_3	6.31
PF12706	Lactamase_B_2	2.70
PF00027	cNMP_binding	1.80
PF07883	Cupin_2	0.90
PF00266	Aminotran_5	0.90
PF13365	Trypsin_2	0.90
PF10101	DUF2339	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	39.64

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	96.40 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	96.40 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9.91 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	8.11 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.11 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000880\|AL20A1W_1138212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2556	Open in IMG/M
3300001334\|A2165W6_1096839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	753	Open in IMG/M
3300001535\|A3PFW1_10111554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3616	Open in IMG/M
3300001536\|A1565W1_11109381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1587	Open in IMG/M
3300004114\|Ga0062593_100408198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1218	Open in IMG/M
3300004114\|Ga0062593_100611627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1042	Open in IMG/M
3300004114\|Ga0062593_102632646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	572	Open in IMG/M
3300004156\|Ga0062589_102243420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	560	Open in IMG/M
3300004157\|Ga0062590_101745587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	636	Open in IMG/M
3300005093\|Ga0062594_102474064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	569	Open in IMG/M
3300006791\|Ga0066653_10372525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	727	Open in IMG/M
3300010166\|Ga0126306_10895110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	719	Open in IMG/M
3300010301\|Ga0134070_10246447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	667	Open in IMG/M
3300010371\|Ga0134125_11849705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	656	Open in IMG/M
3300010999\|Ga0138505_100031627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	722	Open in IMG/M
3300011991\|Ga0120153_1070025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	603	Open in IMG/M
3300011992\|Ga0120146_1047154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	721	Open in IMG/M
3300011994\|Ga0120157_1008829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2738	Open in IMG/M
3300012003\|Ga0120163_1063631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	861	Open in IMG/M
3300012010\|Ga0120118_1126772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	614	Open in IMG/M
3300012011\|Ga0120152_1000854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	15352	Open in IMG/M
3300012019\|Ga0120139_1219131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	506	Open in IMG/M
3300012200\|Ga0137382_10614715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	776	Open in IMG/M
3300012204\|Ga0137374_10002473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	21657	Open in IMG/M
3300012208\|Ga0137376_10125790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2191	Open in IMG/M
3300012208\|Ga0137376_10309785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1370	Open in IMG/M
3300012208\|Ga0137376_10959559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	733	Open in IMG/M
3300012350\|Ga0137372_10320228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1196	Open in IMG/M
3300012353\|Ga0137367_10076147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2484	Open in IMG/M
3300012360\|Ga0137375_11346142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	536	Open in IMG/M
3300012951\|Ga0164300_10103560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1254	Open in IMG/M
3300012958\|Ga0164299_10458307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	836	Open in IMG/M
3300012958\|Ga0164299_10698980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	709	Open in IMG/M
3300012958\|Ga0164299_10864689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	652	Open in IMG/M
3300012960\|Ga0164301_11402411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	571	Open in IMG/M
3300012989\|Ga0164305_10264425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1251	Open in IMG/M
3300012989\|Ga0164305_11468289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	603	Open in IMG/M
3300012989\|Ga0164305_11665777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	571	Open in IMG/M
3300013294\|Ga0120150_1012844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1766	Open in IMG/M
3300013766\|Ga0120181_1138882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	529	Open in IMG/M
3300013770\|Ga0120123_1049986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	896	Open in IMG/M
3300014827\|Ga0120171_1076905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	903	Open in IMG/M
3300014829\|Ga0120104_1073355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	665	Open in IMG/M
3300015209\|Ga0167629_1025814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2112	Open in IMG/M
3300015372\|Ga0132256_102647551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	601	Open in IMG/M
3300018000\|Ga0184604_10009089	All Organisms → cellular organisms → Bacteria	2031	Open in IMG/M
3300018027\|Ga0184605_10030215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2229	Open in IMG/M
3300018027\|Ga0184605_10076379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1456	Open in IMG/M
3300018028\|Ga0184608_10096595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1229	Open in IMG/M
3300018061\|Ga0184619_10060596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1659	Open in IMG/M
3300018061\|Ga0184619_10097754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1317	Open in IMG/M
3300018071\|Ga0184618_10038032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1692	Open in IMG/M
3300019869\|Ga0193705_1080155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	630	Open in IMG/M
3300019875\|Ga0193701_1035601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1022	Open in IMG/M
3300019878\|Ga0193715_1047002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	929	Open in IMG/M
3300020022\|Ga0193733_1045656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1237	Open in IMG/M
3300020059\|Ga0193745_1093314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	647	Open in IMG/M
3300021073\|Ga0210378_10333098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	568	Open in IMG/M
3300022195\|Ga0222625_1829888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	863	Open in IMG/M
3300022756\|Ga0222622_10766104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	704	Open in IMG/M
3300028705\|Ga0307276_10001588	All Organisms → cellular organisms → Bacteria	3211	Open in IMG/M
3300028710\|Ga0307322_10005492	All Organisms → cellular organisms → Bacteria	2707	Open in IMG/M
3300028711\|Ga0307293_10030316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1632	Open in IMG/M
3300028711\|Ga0307293_10168774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	697	Open in IMG/M
3300028713\|Ga0307303_10135394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	584	Open in IMG/M
3300028714\|Ga0307309_10009651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1708	Open in IMG/M
3300028715\|Ga0307313_10111861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	833	Open in IMG/M
3300028715\|Ga0307313_10164329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	687	Open in IMG/M
3300028716\|Ga0307311_10160063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	650	Open in IMG/M
3300028716\|Ga0307311_10195975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	591	Open in IMG/M
3300028718\|Ga0307307_10099320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	886	Open in IMG/M
3300028718\|Ga0307307_10212710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	613	Open in IMG/M
3300028719\|Ga0307301_10039425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1439	Open in IMG/M
3300028719\|Ga0307301_10180560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	683	Open in IMG/M
3300028744\|Ga0307318_10318942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	546	Open in IMG/M
3300028771\|Ga0307320_10044545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1632	Open in IMG/M
3300028771\|Ga0307320_10201321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	778	Open in IMG/M
3300028771\|Ga0307320_10288124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	651	Open in IMG/M
3300028778\|Ga0307288_10330289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	611	Open in IMG/M
3300028784\|Ga0307282_10289425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	789	Open in IMG/M
3300028784\|Ga0307282_10472764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	608	Open in IMG/M
3300028787\|Ga0307323_10330377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	547	Open in IMG/M
3300028791\|Ga0307290_10117794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	971	Open in IMG/M
3300028799\|Ga0307284_10173569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	839	Open in IMG/M
3300028799\|Ga0307284_10349806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	598	Open in IMG/M
3300028799\|Ga0307284_10430482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	539	Open in IMG/M
3300028807\|Ga0307305_10124270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1192	Open in IMG/M
3300028807\|Ga0307305_10165436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1020	Open in IMG/M
3300028811\|Ga0307292_10179723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	864	Open in IMG/M
3300028819\|Ga0307296_10251942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	961	Open in IMG/M
3300028819\|Ga0307296_10556081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	628	Open in IMG/M
3300028824\|Ga0307310_10033542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2074	Open in IMG/M
3300028824\|Ga0307310_10149049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1078	Open in IMG/M
3300028824\|Ga0307310_10657717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	536	Open in IMG/M
3300028828\|Ga0307312_10684518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	679	Open in IMG/M
3300028828\|Ga0307312_11015632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	549	Open in IMG/M
3300028878\|Ga0307278_10008297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4902	Open in IMG/M
3300028878\|Ga0307278_10449505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	564	Open in IMG/M
3300028880\|Ga0307300_10038395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1327	Open in IMG/M
3300028881\|Ga0307277_10271248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	750	Open in IMG/M
3300028884\|Ga0307308_10026715	All Organisms → cellular organisms → Bacteria	2674	Open in IMG/M
3300028885\|Ga0307304_10398452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	621	Open in IMG/M
3300030830\|Ga0308205_1037948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	610	Open in IMG/M
3300030993\|Ga0308190_1120710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	595	Open in IMG/M
3300031058\|Ga0308189_10116242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	872	Open in IMG/M
3300031058\|Ga0308189_10177929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	753	Open in IMG/M
3300031058\|Ga0308189_10194721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	730	Open in IMG/M
3300031058\|Ga0308189_10220813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	699	Open in IMG/M
3300031092\|Ga0308204_10096137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	809	Open in IMG/M
3300031093\|Ga0308197_10153033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	743	Open in IMG/M
3300031123\|Ga0308195_1049785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	604	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.10%
Host-Associated	Host-Associated	0.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.09%
Aquatic	Environmental → Aquatic	9.01%
Plants	Host-Associated → Plants	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.19%
Sediment	Environmental → Aquatic → Sediment	7.21%
Freshwater	Environmental → Aquatic → Freshwater	1.80%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	89.19%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.21%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.80%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	68.47%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	14.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.21%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.41%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.90%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	57.66%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	14.41%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.21%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.41%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.80%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.90%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.90%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.90%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.90%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000880	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-65cm-20A)- 1 week illumina	Environmental	Open in IMG/M
3300001334	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A21-65cm)- 6 month illumina	Environmental	Open in IMG/M
3300001535	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illumina	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300011991	Permafrost microbial communities from Nunavut, Canada - A34_65cm_12M	Environmental	Open in IMG/M
3300011992	Permafrost microbial communities from Nunavut, Canada - A23_65cm_12M	Environmental	Open in IMG/M
3300011994	Permafrost microbial communities from Nunavut, Canada - A7_65cm_12M	Environmental	Open in IMG/M
3300012003	Permafrost microbial communities from Nunavut, Canada - A20_80cm_0.25M	Environmental	Open in IMG/M
3300012010	Permafrost microbial communities from Nunavut, Canada - A7_35cm_12M	Environmental	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013294	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0M	Environmental	Open in IMG/M
3300013766	Permafrost microbial communities from Nunavut, Canada - A26_65cm_6M	Environmental	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300014827	Permafrost microbial communities from Nunavut, Canada - A3_80cm_18M	Environmental	Open in IMG/M
3300014829	Permafrost microbial communities from Nunavut, Canada - A10_35cm_6M	Environmental	Open in IMG/M
3300015209	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G3B, Proglacial river margin, by glacier terminus)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030830	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031123	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_196 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AL20A1W_11382123	3300000880	Permafrost	MNDSVRERIVRNNYTFREANEQIRARADEYDAPIERIPFLCECPVPACTEVLRLTLVEYADVRANPAHFFTTPGHEQADAAVGHVVSRENDYVVVEKDAKAREQ*
A2165W6_10968391	3300001334	Permafrost	CGRRRTTRLAVHSPRKNERTVNDSVRERILENNYTFREANEQIRAKADEYDAPVERVPFLCECPVPSCTQILRLTLAEYENVRANPRHFFTAPGHEQADAAVGHVVSRESDYVIVETDEQVSKE*
A3PFW1_101115543	3300001535	Permafrost	MNDSVRERIVRNNYTFREANEQIRARADEYDAPIERIPFLCECPVPACTEVLRLTLVEYAGVRATPAHFFTAPGHEQADAAVGHVVSRENDYVVVEKDAKAREQ*
A1565W1_111093814	3300001536	Permafrost	MNDSVRERIVRNNYTFREANEQIRARADEYDAPIERIPFLCECPVPSCTEVLRLTMAEYSDVRAHPDHFFTVPGHEQADAAVGHVVSRENGYVVVEKDKDLAEQ*
Ga0062593_1004081983	3300004114	Soil	MNDSVRERIVRNNYTFREANEKIRARADEYDAPIERIPFLCECPVPSCTEVLRLTIAEYSGVRAHPDHFFTVPGHEQEDSAVAHVVSREEGYVVVEKEESVHEQ*
Ga0062593_1006116272	3300004114	Soil	MNDSVHERIVRNNYTFREANEKIRARADEYDAPIERIPFLCECPVPSCTEVLRLTIAEYSGVRANPDHFFTVPGHEQADSAVGHVVSREQGYVVVEKEEGVPEQ*
Ga0062593_1026326461	3300004114	Soil	ERLAGHDPRKKVRAMNDSVRERIVRNNYTFREANEKIRARADEYDAPIERIPFLCECPVPSCTEVLRLTIAEYSGVRAHPEHFFTVPGHEQADSAVGHVVSREEGYVVVEKEESVPEQ*
Ga0062589_1022434201	3300004156	Soil	MNDSVRERIVRNNYTFREANEKIRARADEYDAPIERIPFLCECPVPSCTEVLRLTIAEYSGVRAHPEHFFTVPGHEQADSAVGHVVSREEGYVVVEKEEGVPEQ*
Ga0062590_1017455871	3300004157	Soil	MNDSVRERIVRNNHTFREANEQIRARADEYDAPIERIPFLCECPVPSCTEVLRLTIAEYSRVRAHPSQFFTVPGHEQADSAVAHVVSREKGYVVVEKEESVQEQ*
Ga0062594_1024740642	3300005093	Soil	MNDSVRERIVRNNYTFREANEKIRARADEYDAPIERIPFLCECPVPSCTEVLRLTIAEYSGVRAHPAHFFTVPGHEQADSAVGHVVSREEGYVVVEKEESVPEQ*
Ga0066653_103725251	3300006791	Soil	KNERVMNDSVRERIVRNNYTFRKANEQIRAKADEYDAPIERIPFLCECPVPSCTEVLRLTLAEYSDVRADPARFFTAPGHEQADAAVGHVVSRESGYVVVEKDEEDRDQ*
Ga0126306_108951102	3300010166	Serpentine Soil	VQERIARNNQTFREANEQIRAKADEYDAPLERIPFLCECPRADCTEIVRLTLAEYAGVRADRTHFLTLPGHEDAERPLARVVSRENGYVIVEKDVDGPDES*
Ga0134070_102464472	3300010301	Grasslands Soil	MNDSVRERIVRNNYTFRKANEQIRAKADEYDAPIERIPFLCECPVPSCTEVLRLTLAEYSDVRADPARFFTAPGHEQADAAVGHVVSRESGYVVV
Ga0134125_118497052	3300010371	Terrestrial Soil	MNDSVRERIVRNNYTFREANEKIRARADEYDAPIERIPFLCECPVPSCTEVLRLTIAEYSGVRAHPDHFFTVPGHEQEDSAVAHVVSREEGYVVVE
Ga0138505_1000316272	3300010999	Soil	MNDSVRERIVRNNYTFREANEQIRARADEYDAPIERIPFLCECPVPSCTEVLRLTMAEYSDVRAHPDHFFTAPGHEQADAVVAHVVSREEGYVVVEKEEGVPEQ*
Ga0120153_10700252	3300011991	Permafrost	VNDSVRERIVENNYTFREANEQIRAKADEYDAPVERVPFLCECPVSSCTQILRLTLAEYEEVRANPRHFFTVPGHEQADASVGHVVSRESDYVIVEKDQQVSKE*
Ga0120146_10471542	3300011992	Permafrost	VNDSVRERILENNYTFREANEQIRAKADEYDAPVERVPFLCECPVSSCTQILRLTLAEYEEVRANPRHFFTVPGHEQADASVGHVVSRESDYVIVEKDQQVSKE*
Ga0120157_10088293	3300011994	Permafrost	VNDSVRERIVENNYTFREANEQIRAKADEYDAPVERVPFLCECPVPSCTQILRLTLAEYEEVRANPRHFFTVPGHEQADASVGHVVSRESGYVIVEKDQQVSKE*
Ga0120163_10636311	3300012003	Permafrost	PSESQNEQIRAKADEYDAPVERVPFLCECPVPACTEVLRLTLVEYADVRANPAHFFTTPGHEQADAAVGHVVSRENDYVVVEKDAKAREQ*
Ga0120118_11267722	3300012010	Permafrost	VNDSVRERIVENNYTFREANEQIRAKADEYDAPVERVPFLCECPVPSCTQILRLTLAEYEEVRANPRHFFTVPGHEPADASVGHVVSRESDYVIVEKDQQVSKE*
Ga0120152_100085411	3300012011	Permafrost	VNDSVRERILENNYTFREANEQIRAKADEYDAPVERVPFLCECPVPSCTQILRLTLAEYENVRANPRHFFTAPGHEQADAAVGHVVSRESDYVIVETDEQVSKE*
Ga0120139_12191312	3300012019	Permafrost	VNDSVRERIVENNYTFREANEQIRAKADEYDAPVERVPFLCECPVPSCTEILRLTIAEYEEVRANPRHFFTAPGHEQADAAVGHVVSRESDYVIVEKDEHSTK
Ga0137382_106147151	3300012200	Vadose Zone Soil	TFREANEQIRARANEYNAPIERIPFLCECPVPACTEVLRLTLAEYADVRSNPAHFFTAPGHEQADADVGHVVSRADDYVVVEKDA*
Ga0137374_1000247314	3300012204	Vadose Zone Soil	MNDHVRERIVQNNYTFREANEQIRARADEYEAPIERIPFLCECPVPSCTEVLRLTLAEYSDVRAHPAHFFTAPGHEQADAIVGHVASRENGYVVVEKDEDGPEQ*
Ga0137376_101257904	3300012208	Vadose Zone Soil	MNDSVRERIVRNNYTFREANEQIRARANEYNAPIERIPFLCECPVPACTEVLRLTLAEYADVRSNPAHFFTAPGHEQADADVGHVVSRADDYVVVEKDA*
Ga0137376_103097853	3300012208	Vadose Zone Soil	MNDNVRERIVRNNYTFREANERIRARADEYDAPLERIPFLCECPVPSCTEVLRLTLAEYSDVRAHPAHFFTAPGHERADAVVGHVASRENGYVVVEKDEDVPEQYSGL*
Ga0137376_109595592	3300012208	Vadose Zone Soil	RLAAHPSRKNERTVNEGLRGRIVQNNYTFREANERIRAKADAYEAPVERVPFLCECPIPSCTEILRLTLAEYADVRANPNLFFTAPGHEEADAPVGHVVSREGDYVIVQKDDQVGEE*
Ga0137372_103202283	3300012350	Vadose Zone Soil	VSDRVRERIAENNRTFRGANEKIRARADELGAALELIPFLCECPTPACTAIVRLTLADYGEVRSNPMQFRTLPGHEAAEAPVGRVVSRRDGYVVVEKELAER*
Ga0137367_100761474	3300012353	Vadose Zone Soil	MNGHVRERIVQNNYTFREANEQIRASADEYEAPIERIPFLCECPVPSCTEVLRLTLAEYSDVRAHPAHFFTAPGHEQADAIVGHVASRENGYVVVEKDEDGPEQ*
Ga0137375_113461421	3300012360	Vadose Zone Soil	KNERIMNDNVSERIVQNNYTFRKANEQIRARADEYNAPIERIPFLCECPVPWCTEVLRLTLAEYSDVRANPAHFFTAPGHEQADAAVGHVASRENGYVVVEKDEDVYEQ*
Ga0164300_101035602	3300012951	Soil	MNDSVRERIAKNNYTFRDANEQIRARADEYNAPIERIPFLCECPVPACTEVLRLTLTEYGEVRANPARFFTAPGHEEADAAVGHVVSREDGYVVVEKDEELREQ*
Ga0164299_104583073	3300012958	Soil	VSDSVNERIVQNNYTFREANEKIRARADEYDAPIERIPFLCECPVPACTEVLRLTLAEYSEVRAHPGHFFTAPGHEEADASVASVVSREDGYVVVEKTAAAR
Ga0164299_106989802	3300012958	Soil	MNDSVRERIAKNNYTFRDANERIRARADEYDAPIERIPFLCECPVPACTEVLRLTLTEYGEVRANPARFFTAPGHEEADAAVGHVVSREDGYVVVEKDEELREQ*
Ga0164299_108646892	3300012958	Soil	LAARDLRKNVRAMNDSVRERIVRNNYTFREANEKIRARADEYDAPIERIPFLCECPVPSCAEVLRLTIAEYSGVRAHPDRFFTVPGHEQEDLAVAHVVSRQEGYVVVEKEEIIHEQ*
Ga0164301_114024112	3300012960	Soil	RGADRLESERLAARDLRKNVRAMNDSVRERIVRNNYTFREANEKIRARADEYDAPIERIPFLCECPVPSCAEVLRLTIAEYSGVRAHPDRFFTVPGHEQEDLAVAHVVSRQEGYVVVEKEEIIHEQ*
Ga0164305_102644252	3300012989	Soil	MNHSVRQRIAKNNYTFRDANEQIRARADEYNAPIERIPFLCECPVPACTEVLRLTLTEYGEVRANPARFFTAPGHEEADAAVGHVVSREDGYVVVEKDEELREQ*
Ga0164305_114682892	3300012989	Soil	MSDSVRERIVKNNYTFREANEQIRARADEYDAPIERIPFLCECPVPACTEVLRLTLAEYSDVRAHPGHFFTAPGHEEADASVASVVSREDGYVVVEKTAAAREQ*
Ga0164305_116657771	3300012989	Soil	MNDSVRERIVRNNYTFREANEKIRARADEYDAPIERIPFLCECPVPSCAEVLRLTIAEYSGVRAHPDRFFTVPGHEQEDLAVAHVVSRQEGYVVVEKEEIIHEQ*
Ga0120150_10128444	3300013294	Permafrost	MNDSVRERIVRNNYTFREANEQIRARADEYDAPIERIPFLCECPVPACTEVLRLTLVEYADVRANPAHFFTAPGHEQADAAVGHVVSRENDYVVVEKDAKAREQ*
Ga0120181_11388821	3300013766	Permafrost	RIVENNYTFREANEQIRAKADEYDAPVERVPFLCECPVSSCTQILRLTLAEYEEVRANPRHFFTVPGHEQADASVGHVVSRESDYVIVEKDEQVSKE*
Ga0120123_10499861	3300013770	Permafrost	NDSVRERIVRNNYTFREANEQIRARADEYDAPIERIPFLCECPVPACTEVLRLTLVEYADVRANPAHFFTAPGHEQADAAVGHVVSRENDYVVVEKDAKAREQ*
Ga0120171_10769053	3300014827	Permafrost	MNDSVRERIVRNNYTFREANEQIRARADEYDAPIERIPFLCECPVPACTEVLRLTMAEYSDARAHPDHFFTVPGHEQADAAVGHVVSRENGYVVVEKDKDLA
Ga0120104_10733551	3300014829	Permafrost	EQTRARADEYAAPIERIPFLCECPVPACTEVLRLTLVEYADVRANPAHFFTTPGHEQADAAVGHVVSRENDYVVVEKDAKAREQ*
Ga0167629_10258144	3300015209	Glacier Forefield Soil	MNDGVRERIVRNNYTFREANERIRARADEYGAPIERIPFLCECPVPSCTEILRLTLAEYGEVRANPAHFFTVPGHEQADAPVGHVVARENDYVVVEKDEEVREQ*
Ga0132256_1026475512	3300015372	Arabidopsis Rhizosphere	MNDSVRERIVRNNYTFREANEKIRARADEYDAPIERIPFLCECPVPSCTEVLRLTIAEYSGVRAHPEHFFTVPGHEQADSAVGHVVSREEGYVVVEKEESVPEQ*
Ga0184604_100090892	3300018000	Groundwater Sediment	MNDSVRERIVRNNYTFREANEKIRARADEYDAPIERIPFLCECPVPSCTEVLRLTMAEYSDVRANPDHFFTVTGHEQADGAVAHVVSREEGYVVVEKEEGVPEQ
Ga0184605_100302154	3300018027	Groundwater Sediment	MNDNVRERIVQNNYTFRQANEQIRARADEYSAPIERIPFLCECPVPSCTEVLRLTLAEYSDVRANPAHFFTAPGHEQADAAVGHVASRENGYVVVEKDEDVPEQ
Ga0184605_100763793	3300018027	Groundwater Sediment	MNDSVRERIVRNNYTFREANEQIRAKADEYDAPIERIPFLCECPVPSCTEVLRLTLAEYSDVRADPAHFFTAPGHEQADAPVGHVVSRESGYVVVEKDEEDRDQ
Ga0184608_100965953	3300018028	Groundwater Sediment	MNDSVRERIVRNNYTFREANEQIRAKADEYDAPIERIPFLCECPVPACTAVLRLTLAEYSDVRADPAHFFTAPGHEQADAAVGHVVSRESGYVVVEKDEEDRDQ
Ga0184619_100605964	3300018061	Groundwater Sediment	MNDSVRERIVKNNYTFREANEQIHAKAGEYDAPVERVPFLCECPVPSCTRILRLTLAEYEGVRANPAHFFTIPGHEQADAAVGRVVSRENDYVIVEKDEEVRVE
Ga0184619_100977543	3300018061	Groundwater Sediment	MNDSVRERIVRNNYTFREANEQIRARADEYNAPIERVPFLCECPVPACTEVLRLTLAEYADVRVNPAHFFTAPGHEQEDAAVGHVVARANGYVVVEKDAQTGE
Ga0184618_100380324	3300018071	Groundwater Sediment	MNDNVRERIVQNNYTFRQANEQIRARADEYSAPIERIPFLCECPVPSCTEVLRLTLAEYSDVRADPAHFFTAPGHEQADAAVGHVVSRESGYVVVEKDEEDRDQ
Ga0193705_10801552	3300019869	Soil	MSDGVRERIVKNNYTFREANEQIRAKANEYDAPVERVPFLCECPLPSCTQILRLTLAEYEGVRADPNHFFTVPGHEHADAAVGRVVSREDGYVIVEKDKEVGK
Ga0193701_10356011	3300019875	Soil	ANEQIRARADEYDAPIERIPFLCECPVPSCTEVLRLTMAEYSDVRAHPDHFFTAPGHEQADAVVAHVVSREEGYVVVEKEEGVPEQ
Ga0193715_10470023	3300019878	Soil	MNDSVRERIVRNNYTFREANEKIRARADEYDAPIERIPFLCECPVPSCTEVLRLTIAEYSGVRAHPDHFFTVPGHEQADGAVSHVVSREEGYVVVEKEQGVPEQ
Ga0193733_10456564	3300020022	Soil	MNDSVRERIVRNNYTFREANEKIRARADEYDAPIERIPFLCECPVPSCTEVLRLTMAEYSDVRAHPDHFFTVPGHEQADAVVAHVVSREEGYVVVEKEEGVPEQ
Ga0193745_10933142	3300020059	Soil	MNDSVRERIVRNNYTFREANEKIRARADEYDAPIERIPFLCECPVPSCTEVLRLTMAEYSGVRAHPDHFFTVPGHEQADSAVAHVVSREEGYVVVEKEEGVPEE
Ga0210378_103330981	3300021073	Groundwater Sediment	MSDGVRERIVKNNYTFREANEQIRAKADEYDAPIERIPFLCECPVPSCTEVLRLTLAEYSDVRADPAHFFTAPGHEQADAPVGHVVSRESG
Ga0222625_18298881	3300022195	Groundwater Sediment	SDGVRERIVKNNYTFREANEQIRAKANEYDAPVERVPFLCECPLPSCTQILRLTLAEYEGVRADPNHFFTVPGHEHADAAVGRVVSREDDYVIVEKDKEVGKQ
Ga0222622_107661041	3300022756	Groundwater Sediment	MNDSVRERIVRNNYTFREANEKIRARADEYDAPIERIPFLCECPVPSCTEVLRLTMAEYSDVRAHPDHFFTAPGHEQADAVVAHVVSREEGYVVVEKEEGVPEQ
Ga0307276_100015881	3300028705	Soil	IVRNNYTFREANEKIRARADEYDAPIERIPFLCECPVPSCMEVLRLTLAEYSEVRAHPDHFFTVPGHEQADSAVGHVVSREEGYVVVEKEEDVPKE
Ga0307322_100054925	3300028710	Soil	MNDSVRERIVRNNYTFREANEQIRARADEYDAPIERIPFLCECPVPSCTEVLRLTMAEYSDVRAHPDHFFTAPGHEQADAVVAHVVSREEGYVVVEKEEGVPEQ
Ga0307293_100303162	3300028711	Soil	VNDNVRERIVKNNYRFREANEHIRARADEYDAPIERIPFLCECPVPSCTEVLRLTLAEYSDVRANSAHFFTMPGHEQADSAVGHVVSRENGYVVVEKDEESPEQ
Ga0307293_101687742	3300028711	Soil	MNDSVRERIVRNNYTFREANEKIRARADEYDAPIERIPFLCECPVPSCTEVLRLTMAEYSDVRANPDHFFTVPGHEQADRAVAHVVSRQEGYVVVEKEEGVPEQ
Ga0307303_101353942	3300028713	Soil	KNLRAMNDSVRERIVRNNYTFREANEQIRARADEYDAPIERIPFLCECPVPSCTEVLRLTMAEYSDVRAHPDHFFTVPGHEQADAVVAHVVSREEGYVVVEKEEGVPEQ
Ga0307309_100096511	3300028714	Soil	RKNLRAMNDSVRERIVRNNYTFREANEQIRARADEYDAPIERIPFLCECPVPSCTEVLRLTMAEYSDVRAHPDHFFTAPGHEQADAVVAHVVSREEGYVVVEKEEGVPEQ
Ga0307313_101118613	3300028715	Soil	MNDSVRERIVRNNYTFPEANEQIRSRADEYDAPIERIPFLCECPVQSCTEVLRMTMAQYSDVQAHPDHFFTVPGHEQADGAVSHVVSREEGYVVVEKEQGVPEQ
Ga0307313_101643292	3300028715	Soil	TGRLGGPDPRKNERVMNDSVRERIVRNNYTFREANEQIRAKADEYDAPIERIPFLCECPVPSCTEVLRLTLAEYSDVRADPAHFFTAPGHEQADAPVGHVVSRESGYVVVEKDEEDRDQ
Ga0307311_101600632	3300028716	Soil	MNDSVRERIVRNNYTFREANEKIRARADEYDAPIERIPFLCECPVPSCTEVLRLTMAEYSDVRAHPDHFFTVPGHEQADSAVAHVVSREEGYVVVEKEEGVPEQ
Ga0307311_101959751	3300028716	Soil	IVQNNYTFREANEQIHAKAGEYDAPVERVPFLCECPVPSCTRILRLTLAEYEGVRANPAHFFTAPGHEQADAAVGHVVSREADYVIVEKDEEVRVQ
Ga0307307_100993201	3300028718	Soil	PGPGDSARARGADRLESERLAAHDPRKKVRAMNDSVRERIVRNNYTFREANEKIRARADEYDAPIERIPFLCECPVPSCTEVLRLTMAEYSGVRANPDHFFTVPGHEQADGAVAHVFSREEGYVVVEKEEGVPEQ
Ga0307307_102127101	3300028718	Soil	MNDSVRERIVRNNYTFREANEKIRARADEYDAPIERIPFLCECPVPSCTEVLRLTMAEYSDVRAHPDHFFTVPGHEQADSAVAHVVSREE
Ga0307301_100394253	3300028719	Soil	MDDSVRERIVRNNYTFREANEQIRARADEYDAPIERIPFLCECPVTSCTEVLRLTMAEYSDVRANPDHFFTVPGHEQADGAVAHVVSREEGYVVVEKEEGAPEQ
Ga0307301_101805601	3300028719	Soil	RNNYTFREANEQIRAKADEYDAPIERIPFLCECPVPSCTEVLRLTLAEYSDVRADPAHFFTAPGHEQADAPVGHVVSRESGYVVVEKDEEDRDQ
Ga0307318_103189421	3300028744	Soil	MDDSVRERIVRNNYTFREANEKIRARADEYDAPIERIPFLCECPVPSCTEVLRLTLAEYSDVRADPAHFFTAPGHEQADAPVGHVVSRESGYVVVEKDEDDRDQ
Ga0307320_100445453	3300028771	Soil	MDDSVRERIVRNNYTFREANEQIRARADEYDAPIERIPFLCECPVPSCMEVLRLTLAEYSEVRARPDHFFTVPGHEQADSAVGHVVSREDGYVVVEKEEDVPKE
Ga0307320_102013212	3300028771	Soil	VNESVRERIVKNNYRFREANEHIRARADEYDAPIERIPFLCECPVPSCTEVLRLTLAEYSDVRANSAHFFTVPGHEQADSAVGHVVSRESGYVVVEKDEESPEQ
Ga0307320_102881242	3300028771	Soil	PGDTTRARGVDHPETWRLGGPDPRKNERVMNDSVRERIVRNNYTFREANEQIRAKADEYDAPIERIPFLCECPVPSCTEVLRLTLAEYSDVRADPAHFFTAPGHEQADAPVGHVVSRESGYVVVEKDEEDRDQ
Ga0307288_103302892	3300028778	Soil	MNDSVRERIVKNNFTFREANERIRARADEYDAPIERIPFLCECPVPACTEILRLTLAEYGEVRANPAHFFTVPGHEQADAAVGHVVSRGNGYVVVEKDEGVGEQ
Ga0307282_102894251	3300028784	Soil	NDSVRERIVRNNYTFREANEKIRARADEYDAPIERIPFLCECPVPSCTEVLRLTMAEYSDVRAHPDHFFTVPGHEQADSAVAHVVSREEGYVVVEKEEGVPEQ
Ga0307282_104727642	3300028784	Soil	MNDSVRERIVRNNYTFREANEQIRARADEYNAPIERVPFLCECPVPACTEVLRLTLAEYADVRANPAHFFTAPGHEQADAAVGHVVARANGYVVVEKDAQTGE
Ga0307323_103303771	3300028787	Soil	LRPGRGNPPWSGNSARACGADHPKTRRLGGPDPRKNERIVNDNVRERIVKNNYRFREANEHIRARADEYDAPIERIPFLCECPVPSCTEVLRLTLAEYSDVRANSAHFFTMPGHEQADSAVGHVVSRENGYVVVEKDEESPEQ
Ga0307290_101177942	3300028791	Soil	MNDPVRDRIVQNNYTFREANEQIHAKAGEYDAPVERVPFLCECPVPSCTRILRLTLAEYEGVRANPAHFFTAPGHEQADAAVGHVVSREAHYVIVEKDEEVRVQ
Ga0307284_101735691	3300028799	Soil	MNDSVRERIVRNNYTFREANEQIRSRADEYDAPIERIPFLCECPVQSCTEVLRLTMAQYSDVRANPDHFFTVPGHEQADAVVAHVVSREEGYVVVEKEEGVPEQ
Ga0307284_103498062	3300028799	Soil	AMNDSVRERIVRNNYTFPEANEQIRSRADEYDAPIERIPFLCECPVQSCTEVLRMTMAQYSDVQAHPDHFFTVPGHEQADGAVSHVVSREEGYVVVEKEQGVPEQ
Ga0307284_104304822	3300028799	Soil	GPGDTTRARGVDHPETGRLGGPDPRKNERVMNDSVRERIVRNNYTFREANEQIRAKADEYDAPIERIPFLCECPVPSCTEVLRLTLAEYSDVRADPAHFFTAPGHEQADAPVGHVVSRESGYVVVEKDDEDPTSSLA
Ga0307305_101242701	3300028807	Soil	MNDSVRERIVRNNYTFREANEQIRAKADEYDAPIERIPFLCECPVPSCTEVLRLTLAEYSDVRADPAHFFTAPGHEQADAAVGHVVSRASGYV
Ga0307305_101654361	3300028807	Soil	MNDSVRERIVRNNYTFREANEKIRARADEYDAPIERIPFLCECPVPSCTEVLRLTMAEYSDVRAHPDHFFTVPGHEQADSAVAHVVSREEGYVIVEKEEGVPEQ
Ga0307292_101797232	3300028811	Soil	MNDSVRERIVRNNYTFREANEQIRAKADEYDAPIERIPFLCECPVPSCTEVLRLTLAEYSDVRADPAHFFTAPGHEQADAAVGHVVSRESGYVVVEKDDEDPTSSLA
Ga0307296_102519423	3300028819	Soil	MNDSVRERIVRNNYTFREANEQIRARADEYDAPIERIPFLCECPVPSCTEVLRLTMAEYSDVRANPDHFFTVPGHEQADGAVAHVVSREEGYVVVEKEEGVSEQ
Ga0307296_105560811	3300028819	Soil	ERIVNDNVRERIVKNNYRFREANEHIRARADEYDAPIERIPFLCECPVPSCTEVLRLTLAEYSDVRANSAHFFTMPGHEQADSAVGHVVSRENGYVVVEKDEESPEQ
Ga0307310_100335424	3300028824	Soil	VNESVRERIVKNNYRFREANEHIRARADEYDAPIERIPFLCECPVPSCTEVLRLTLAEYSDVRANSAHFFTMPGHEQADSAVGHVVSRENGYVVVEKDEESPEQ
Ga0307310_101490492	3300028824	Soil	MNDPVRDRIVQNNYTFREANEQIHAKAGEYDAPVERVPFLCECPVPSCTRILRLTLAEYEGVRANPAHFFTAPGHEQADAAVGHVVSREADYVIVEKDEEVRVQ
Ga0307310_106577171	3300028824	Soil	FRRPLTAQEPADMNDSVRERIVRNNYTFREANEQIRARADEYNAPIERVPFLCECPVPACTEVLRLTLAEYADVRANPAHFFTAPGHEQADAAVGHVVARANGYVVVEKDAQTGE
Ga0307312_106845182	3300028828	Soil	MNDSVRERIVKNNYRFREANEQIRARADEYEAPIERIPFLCECPVPACTEVLRLTLTEYSGVRANSAHFFTVPGHEQADAAVGHVVSREDGYVVVEKDGDVPEQ
Ga0307312_110156321	3300028828	Soil	LRPGRGNPPWSGNSARACGADHPKTRRLGGPDPRKNERIVNDSVRERIVKNNYRFREANEHIRARADEYDAPIERIPFLCECPVPSCTEVLRLTLAEYSDVRANSAHFFTMPGHEQADSAVGHVVSRENGYVVVEKDEESPEQ
Ga0307278_100082974	3300028878	Soil	MNDSVRERIVRNNYTFREANEQIRAKADEYDAPIERIPFLCECPVPSCTEVLRLTLAEYSDVRADPAHFFTAPGHEQADATVGHVISRESGYVVVEKDGEDRDQ
Ga0307278_104495051	3300028878	Soil	VRERIVRNNYTFREANEQIRAKADEYDAPIERIPFLCECPVPACTEVLRLTLAEYSDVRADPSHFFTAPGHEQADAAVGHVVSRESGYVVVEKDEEDRDQ
Ga0307300_100383954	3300028880	Soil	NYTFREANEQIRARADEYDAPIERIPFLCECPVPDCTEILRLTLAEYADVRANPAHFFTAPGHEQADAAVGHVVSRENDYVVVEKDGASGDL
Ga0307277_102712482	3300028881	Soil	MNDSVRERIVRNNYTFREANEQIRARADEYDAPIERIPFLCECPVPSCTEVLRLTMAEYSDVRAHPDHFFTVPGHEQADAVVAHVVSREEGYVVVEKEEGVPEQ
Ga0307308_100267156	3300028884	Soil	RERIVRNNYTFPEANEQIRSRADEYDAPIERIPFLCECPVQSCTEVLRMTMAQYSDVQANPDHFFTVPGHEQADGAVAHVVSREEGYVVVEKEQGVPEQ
Ga0307304_103984522	3300028885	Soil	MNDSVRERIVRNNYTFREANEKIRARADEYDAPIERIPFLCECPVPSCTEVLRLTMAEYSDVRAHPDHFFTVPGHEQADSAVAHVVSRDEGYVVV
Ga0308205_10379481	3300030830	Soil	DSVRERIVRNNYTFREANEQIRAKADEYDAPIERIPFLCECPVPSCTEVLRLTLAEYSDVRADPAHFFTAPGHEQADAAVGHVVSRESGYVVVEKDEEDRDQ
Ga0308190_11207102	3300030993	Soil	VNDSVRERIVRNNYTFREANEQIRARADEYDAPIERIPFLCECPVPSCTEVLRLTMAEYSDVRAHPDHFFTAPGHEQADAVVAHVVSREEGYVVVEKE
Ga0308189_101162422	3300031058	Soil	MDDSVRERIVRNNYTFREANEQIRARADEYDAPIERIPFLCECPVPSCTEVLRLTMAEYSDVRAHPDHFFTAPGHEQADAVVAHVVSREEGYVVVEKEEGVPEQ
Ga0308189_101779291	3300031058	Soil	SVRERIVRNNYTFREANEQIRAKADEYDAPIERIPFLCECPVPSCTEVLRLTLAEYSDVRADPAHFFTAPGHEQADAPVGHVVSRESGYVVVEKDEEDRDQ
Ga0308189_101947212	3300031058	Soil	DSVRERIVRNNYTFREANEKIRARADEYDAPIERIPFLCECPVPSCTEVLRLTMAEYSGVRANPDHFFTVPGHEQADGAVAHVVSREEGYVVVEKEEGVPEQ
Ga0308189_102208131	3300031058	Soil	RNNYTFRAANEQIRARADEYDAPIERIPFLCECPVPACTEILRLTLAEYGDVRANPAHFFTVPGHEEADAVVAHVVFRGNGYVVVEKNEAARRE
Ga0308204_100961372	3300031092	Soil	VRNNYTFREANEKIRARADEYDAPIERIPFLCECPVPSCMEVLRLTLAEYSEVRAHPDHFFTVPGHEQADSAVGHVVSREDGYVVVEKEEDVPKE
Ga0308197_101530331	3300031093	Soil	SVRERIVRNNYTFREANEQIRARADEYDAPIERIPFLCECPVPSCTEVLRLTMAEYSDVRAHPDHFFTAPGHEQADAVVAHVVSREEGYVVVEKEEGVPEQ
Ga0308195_10497851	3300031123	Soil	NYTFREANEQIRARADEYDAPIERIPFLCECPVPSCTEVLRLTMAEYSDVRAHPDHFFTAPGHEQADAVVAHVVSREEGYVVVEKEEGVPEQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085491

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences