Metagenome Family F085385

Basic Information
Family ID	F085385
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	48 residues
Representative Sequence	MYAIQEVAMWMLLGVLTGFTGGYTLGLKEGKREGFIRGKIAARKNAESR
Number of Associated Samples	73
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	81.98 %
% of genes near scaffold ends (potentially truncated)	18.02 %
% of genes from short scaffolds (< 2000 bps)	66.67 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (45.946 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (22.523 % of family members)
Environment Ontology (ENVO)	Unclassified (54.054 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (47.748 % of family members)

Multiple Sequence Alignments

Select alignment to view:

Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58. 1B570J40625_1007707932 2JGI25908J49247_100938862 3JGI25922J50271_100553172 4Ga0069718_155738122 5Ga0069718_156993562 6Ga0049081_100625821 7Ga0049080_101154213 8Ga0049082_102696101 9Ga0078894_106862922 10Ga0070749_101897084 11Ga0075464_103191443 12Ga0075464_107467051 13Ga0075464_107550111 14Ga0075464_108960422 15Ga0075464_110523621 16Ga0075459_10381542 17Ga0070748_10898401 18Ga0070748_12690521 19Ga0102859_10141105 20Ga0102859_10492661 21Ga0102859_11081762 22Ga0104986_14325 23Ga0114340_10123516 24Ga0114347_10137085 25Ga0114363_100140716 26Ga0114363_10053013 27Ga0114363_10387373 28Ga0114880_11575981 29Ga0105093_101406571 30Ga0105099_101594161 31Ga0114975_100588602 32Ga0114969_102330562 33Ga0114969_103414932 34Ga0114974_100043094 35Ga0114974_102793222 36Ga0114976_100874024 37Ga0114976_104710912 38Ga0114982_10578284 39Ga0114982_10694774 40Ga0133913_103212284 41Ga0157210_10022538 42Ga0157210_10127312 43Ga0157210_10480562 44Ga0164292_102377664 45Ga0164292_105115562 46Ga0119960_10214681 47Ga0119960_10475362 48Ga0181347_11296481 49Ga0181344_100060616 50Ga0181343_10103754 51Ga0181358_10498872 52Ga0181355_13764822 53Ga0181359_10088293 54Ga0207193_15482461 55Ga0211731_105023516 56Ga0211731_1060154910 57Ga0208360_10111642 58Ga0222712_1000461316 59Ga0255147_10296554 60Ga0255178_10144802 61Ga0255148_10326891 62Ga0255142_10585672 63Ga0255171_10475072 64Ga0255151_10009752 65Ga0255175_10733101 66Ga0208644_13421962 67Ga0208644_13624242 68Ga0209599_100508391 69Ga0209599_101382321 70Ga0209599_102148561 71Ga0209442_12762511 72Ga0209087_10381063 73Ga0209296_11065783 74Ga0209134_101780462 75Ga0209230_106149322 76Ga0209253_104066332 77Ga0209191_10795634 78Ga0209401_10453966 79Ga0247723_100156016 80Ga0247723_10722242 81Ga0304730_10278848 82Ga0315907_100583537 83Ga0315900_101238992 84Ga0315909_1000993914 85Ga0315909_100975795 86Ga0315909_109181262 87Ga0315904_103010212 88Ga0315903_110180342 89Ga0334994_0003672_2817_2960 90Ga0334994_0007172_5451_5600 91Ga0334994_0225707_323_472 92Ga0334994_0339316_201_353 93Ga0334994_0396617_318_464 94Ga0334987_0003657_2947_3096 95Ga0334995_0069459_2547_2696 96Ga0334995_0766769_287_430 97Ga0335012_0302449_683_811 98Ga0335027_0002783_2947_3096 99Ga0335027_0003316_11563_11715 100Ga0335027_0044952_3496_3606 101Ga0335027_0145720_511_654 102Ga0335029_0002362_4465_4614 103Ga0335029_0003183_1318_1470 104Ga0335029_0140794_427_579 105Ga0335030_0006139_2332_2481 106Ga0335031_0070341_10_135 107Ga0335031_0142165_1379_1522 108Ga0335031_0258180_143_292 109Ga0335031_0487980_62_211 110Ga0335066_0306107_766_897 111Ga0335058_0041634_33_182
Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58. 1B570J40625_1007707932 2JGI25908J49247_100938862 3Ga0069718_155738122 4Ga0049080_101154213 5Ga0070749_101897084 6Ga0075464_108960422 7Ga0104986_14325 8Ga0114880_11575981 9Ga0105093_101406571 10Ga0114974_100043094 11Ga0114976_100874024 12Ga0157210_10127312 13Ga0119960_10214681 14Ga0181343_10103754 15Ga0209087_10381063 16Ga0315904_103010212
Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48. 1Ga0069718_156993562 2B570J40625_1007707932 3JGI25908J49247_100938862 4Ga0049081_100625821 5Ga0078894_106862922 6Ga0070749_101897084 7Ga0075464_107467051 8Ga0075464_107550111 9Ga0070748_10898401 10Ga0070748_12690521 11Ga0102859_10141105 12Ga0102859_10492661 13Ga0102859_11081762 14Ga0104986_14325 15Ga0114363_100140716 16Ga0105093_101406571 17Ga0114969_102330562 18Ga0114969_103414932 19Ga0157210_10480562 20Ga0211731_105023516 21Ga0211731_1060154910 22Ga0208360_10111642 23Ga0222712_1000461316 24Ga0255178_10144802 25Ga0255148_10326891 26Ga0255171_10475072 27Ga0208644_13624242 28Ga0209599_100508391 29Ga0209087_10381063 30Ga0209296_11065783 31Ga0209230_106149322 32Ga0247723_100156016 33Ga0315909_109181262 34Ga0334994_0007172_5451_5600 35Ga0334994_0225707_323_472 36Ga0334994_0396617_318_464 37Ga0334987_0003657_2947_3096 38Ga0334995_0069459_2547_2696 39Ga0335027_0003316_11563_11715 40Ga0335058_0041634_33_182
Powered by MSAViewer

Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.44% β-sheet: 0.00% Coil/Unstructured: 41.56%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
Powered by Feature Viewer

Structure Viewer
WebGL does not seem to be available. This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser. For a list of supported browsers, refer to http://caniuse.com/#feat=webgl. Load File(s)

Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
Powered by PDBe Molstar

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF05257	CHAP	20.72
PF01844	HNH	3.60
PF03354	TerL_ATPase	2.70
PF04860	Phage_portal	1.80
PF12850	Metallophos_2	0.90
PF04586	Peptidase_S78	0.90
PF05065	Phage_capsid	0.90
PF05869	Dam	0.90
PF14279	HNH_5	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	Mobilome: prophages, transposons [X]	2.70
COG3740	Phage head maturation protease	Mobilome: prophages, transposons [X]	0.90
COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	Mobilome: prophages, transposons [X]	0.90

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.05 %
Unclassified	root	N/A	45.95 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	0.90 %
Unclassified	root	N/A	45.95 %
Viruses	superkingdom	All Organisms → Viruses	53.15 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.90 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	45.95 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.21 %
Unclassified	root	N/A	45.95 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.90 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	45.95 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.21 %
Unclassified	root	N/A	45.95 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.21 %
Unclassified	root	N/A	45.95 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	45.95 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.90 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	45.95 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.21 %
Unclassified	root	N/A	45.95 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.90 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	45.05 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.21 %
Unclassified	root	N/A	45.95 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.21 %
Unclassified	root	N/A	45.95 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	45.05 %

Scaffold	Taxonomy	Length	IMG/M Link
3300002835\|B570J40625_100770793	Not Available	850	Open in IMG/M
3300003277\|JGI25908J49247_10093886	Not Available	727	Open in IMG/M
3300003413\|JGI25922J50271_10055317	Not Available	883	Open in IMG/M
3300004481\|Ga0069718_15573812	Not Available	1605	Open in IMG/M
3300004481\|Ga0069718_15699356	Not Available	887	Open in IMG/M
3300005581\|Ga0049081_10062582	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1401	Open in IMG/M
3300005582\|Ga0049080_10115421	Not Available	909	Open in IMG/M
3300005584\|Ga0049082_10269610	Not Available	572	Open in IMG/M
3300005662\|Ga0078894_10686292	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	905	Open in IMG/M
3300006802\|Ga0070749_10189708	Not Available	1181	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	93.69%
Terrestrial	Environmental → Terrestrial	6.31%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	6.31%
Freshwater	Environmental → Aquatic → Freshwater	80.18%
Marine	Environmental → Aquatic → Marine	13.51%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	9.91%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.70%
Lake	Environmental → Aquatic → Freshwater → Lake	43.24%
Lentic	Environmental → Aquatic → Freshwater → Lentic	16.22%
Lotic	Environmental → Aquatic → Freshwater → Lotic	2.70%
River	Environmental → Aquatic → Freshwater → River	6.31%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.60%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	8.11%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	6.31%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	1.80%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	2.70%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.90%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.90%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	42.34%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	13.51%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	9.91%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	8.11%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	6.31%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	6.31%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.60%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	2.70%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Aquatic	1.80%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	9.91%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	4.50%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	1.80%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	2.70%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.90%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	22.52%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	6.31%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	6.31%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.70%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	2.70%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	1.80%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.90%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	11.71%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	9.91%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.90%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.90%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.90%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	2.70%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.80%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	4.50%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	1.80%

Visualization
Download SVG Download PNG Download CSV
Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003413	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005584	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M

Showing 1 to 10 of 73 entries

Previous1 2 3 4 5…8Next

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J40625_1007707932	3300002835	Freshwater	MYAFQEVAMWMLLGVLTGFVGGYSLGMKEGKREGFIRGKIAARTLKEYRD*
JGI25908J49247_100938862	3300003277	Freshwater Lake	MYTLGEVAAWLLIGVLMGFISGYTLGLKEGKREGFVRGKIAARKGDR*
JGI25922J50271_100553172	3300003413	Freshwater Lake	MYSIGEVAMWLLIGVAIGFTFGYTAGLKEGKREGFIRGKIAARKAVR*
Ga0069718_155738122	3300004481	Sediment	MYAFQEVAMWMLLGVLAGFTAGYTMGLKDGKREGFIRGKIAGRKNAEIR*
Ga0069718_156993562	3300004481	Sediment	MYAIQEVAMWMLLGVLTGFTGGYTLGLKEGKREGFIRGKIAARKNAESR*
Ga0049081_100625821	3300005581	Freshwater Lentic	MYAFQEVAMWMLFGVFTGFMAGYAIGRKEGKREGFIRGKVAARRNVEIR*
Ga0049080_101154213	3300005582	Freshwater Lentic	EVAMWMLFGVFTGFMAGYAIGRKEGKREGFIRGKVAARRNVEIR*
Ga0049082_102696101	3300005584	Freshwater Lentic	MYTLGEVAAWLLLGVLMGFTSGYTLGLKEGKREGFIRGRIAGRKNAEIR*
Ga0078894_106862922	3300005662	Freshwater Lake	MYTIMEVAAWMMLGVLTGFTGGYTVGLKEGKREGFIRGKIAARRNAEIR*
Ga0070749_101897084	3300006802	Aqueous	MYTITEVAAWMMLGILTGFTGGYTLGLKEGKREGYIRGKIAGRRNAEYRD*
Ga0075464_103191443	3300006805	Aqueous	MYTFQEVAMWMLLGVAIGFVSGYTAGLKEGKREGFIRGKIAARKKMELR*
Ga0075464_107467051	3300006805	Aqueous	NMYTFQEVAMWMLLGILTGFTGGYTMGLKEGKREGFIRGKIAARRNAEIR*
Ga0075464_107550111	3300006805	Aqueous	MYTFQEVAMWMLLGILSGFTGGYTLGLKEGKREGYIRGKIAGRRNAEYRD*
Ga0075464_108960422	3300006805	Aqueous	MYTFMEVAMWMLLGVGIGFVSGFTAGLKEGKREGYIRGKIAGRRKAE
Ga0075464_110523621	3300006805	Aqueous	KMYTFQEVAMWMLLGVAIGFVSGYTAGLKEGKREGFIRGKIAARRNAEIR*
Ga0075459_10381542	3300006863	Aqueous	MYAFQEVAMWMLIGVLVGFTAGYTAGLKEGKREGFIRGKIAARKNAETR*
Ga0070748_10898401	3300006920	Aqueous	MYTFMEVAMWMLLGAGIGFVSGFTAGLKEGKREGYIRGKIAGRRKAEYRD*
Ga0070748_12690521	3300006920	Aqueous	MYTIGEVAMWMMLGVLVGFTSGYTLGLKEGKREGFIRGKIAARRNAEIR*
Ga0102859_10141105	3300007708	Estuarine	MYTLGEVAAWLLLGVLIGFTSGYTLGLKEGKREGFIRGKIAARKNAEIR*
Ga0102859_10492661	3300007708	Estuarine	VAMWMLLGVLAGFTGGYTMGLKDGKREGFIRGKIAGRKNVEIQ*
Ga0102859_11081762	3300007708	Estuarine	MYTLGEVAAWLLLGVLMGFISGYTLGLKEGKREGFVRGRIAGRKNVEIR*
Ga0104986_14325	3300007734	Freshwater	MYAIQEVAMWMLIASTIGFTIGYTVGLKEGKREGFIRGKIAARKSSEVR*
Ga0114340_10123516	3300008107	Freshwater, Plankton	MYAIQEVAMWMLLGVLTGFVSGYTLGLKEGKREGFIRGKIAARKSLESR*
Ga0114347_10137085	3300008114	Freshwater, Plankton	MYTIMEVAAWMMLGILTGFTGGYTLGLKEGKREGFIRGKIAARKAVNQ*
Ga0114363_100140716	3300008266	Freshwater, Plankton	MYTIMEVAAWMMLGILTGFTGGYTLGLKEGKREGFIRGKIAARKNMEVR*
Ga0114363_10053013	3300008266	Freshwater, Plankton	MYAFQEVAMWMLLGILSGFTGGYTLGLKEGKREGYIRGKIAGRRNAEYRD*
Ga0114363_10387373	3300008266	Freshwater, Plankton	MYAFQEVAMWMLLGVLTGFVGGYSLGLKEGKREGFIRGKIAARKNAETR*
Ga0114880_11575981	3300008450	Freshwater Lake	WMLLGVLTGFVGGYTLGQKDGKREGYIRGKIAGSRKAEYRD*
Ga0105093_101406571	3300009037	Freshwater Sediment	METAAWMGLGIMSGFVGGYSLGMKEGKREGFIRGKVAARRSAEYRD*
Ga0105099_101594161	3300009082	Freshwater Sediment	METAAWMGLGIMSGFVGGYSLGMKEGKREGFIRGKIAARRSAEYRD*
Ga0114975_100588602	3300009164	Freshwater Lake	MYAFHEVAMWMLLGVLVGFTAGYTAGLKEGKREGFIRGKIAARRNQEIR*
Ga0114969_102330562	3300009181	Freshwater Lake	MYTFQEAAIWMLLGVLTGFIAGYTAGLKEGKREGFIRGKIAARRNAEIR*
Ga0114969_103414932	3300009181	Freshwater Lake	MYTFQEVTMWILLGVFLGFIVGYTAGLKEGKREGFIRGKIASRKKAEIR*
Ga0114974_100043094	3300009183	Freshwater Lake	MYAFSEIVAWSLLGVLTGFTGGYASGFKEGKREGFIRGRIAASRKAVSQ*
Ga0114974_102793222	3300009183	Freshwater Lake	MEVAMWMLLGVGIGFVSGFTAGLKEGKREGYIRGKIAGRRKAEYRD*
Ga0114976_100874024	3300009184	Freshwater Lake	LIGVFMGFIVGYTAGLKEGKREGFIRGKIASRRKAEI*
Ga0114976_104710912	3300009184	Freshwater Lake	MYTFQEVAMWMLLGVAIGFISGYTAGLKEGKREGFIRGKIAARRKAEIQ*
Ga0114982_10578284	3300009419	Deep Subsurface	MYTIGEVAMWMMLGVLVGFTSGYTLGLKEGKREGFIRGKIAARKNMEVR*
Ga0114982_10694774	3300009419	Deep Subsurface	MYAFQEVAMWMLIGVAIGFTFGYTLGLKEGKREGYIRGKIAGRRVAEYRD*
Ga0133913_103212284	3300010885	Freshwater Lake	MYAFSEIVAWSLLGVLTGFTGGYASGFKEGRREGFIRGRIAASRKAVSQ*
Ga0157210_10022538	3300012665	Freshwater	MYTFQEVAMWMLLGVAIGFVSGYTAGLKEGKREGFIRGKIAARRNAEIR*
Ga0157210_10127312	3300012665	Freshwater	MYSIGEVAMWLLIGVAIGFTFGYTAGLKEGKREGFIRGKIAARKAVQ*
Ga0157210_10480562	3300012665	Freshwater	MYTFQEVAIWMLLGVLTGFIAGYTAGLKEGKREGYIRGKIAGRRKAEYRD*
Ga0164292_102377664	3300013005	Freshwater	MYSMGEVAMWLLISVAIGFTFGYTAGLKEGKREGFIRGKIAARKAVR*
Ga0164292_105115562	3300013005	Freshwater	MMYSIGEVAMWLLIGVAIGFTFGYTAGLKEGKREGFIRGKIAARKAVR*
Ga0119960_10214681	3300014811	Aquatic	FPSHDQGAKMYTFQEVAMWMLLGVAIGFVSGYTAGLKEGKREGFIRGKIAARRNAEIR*
Ga0119960_10475362	3300014811	Aquatic	MYTFQEVAIWMLLGVLTGFIAGYTAGLKEGKREGFIRGKIAARRKAEIR*
Ga0181347_11296481	3300017722	Freshwater Lake	LGEVAAWLLIGVLMGFISGYTLGLKEGKREGFVRGKIAARKGDR
Ga0181344_100060616	3300017754	Freshwater Lake	MYTFQEVAMWMLLGVAIGFVSGYTAGLKEGKREGFIRGKIAARRNAEIR
Ga0181343_10103754	3300017766	Freshwater Lake	MWMLLGVAIGFVSGYTAGLKEGKREGFIRGKIAARRNAEIR
Ga0181358_10498872	3300017774	Freshwater Lake	MYTLGEVAAWLLIGVLMGFISAYTLGLKEGKREGFVRGKIAARKGDR
Ga0181355_13764822	3300017785	Freshwater Lake	MYTIGEVAMWMLFGVFTGFMAGYAIGRKEGKREGFIRGKVAARRNVEIR
Ga0181359_10088293	3300019784	Freshwater Lake	MYTLGEVAAWLLIGVLMGFISGYTLGLKEGKREGFVRGKIAARKGDR
Ga0207193_15482461	3300020048	Freshwater Lake Sediment	MYSIGEVAMWLLIGVAIGFTFGYTAGLKEGKREGFIRGKSAARKAVR
Ga0211731_105023516	3300020205	Freshwater	MYTITEVAAWLMLGVLTGFVGGYSLGLKEGKREGFIRGKIAARRSVEQR
Ga0211731_1060154910	3300020205	Freshwater	MYTFQEVAMWMLLGVAIGFISGYTAGLKEGKREGFIRGKIAARKKMEIR
Ga0208360_10111642	3300020551	Freshwater	MYTLAETAMWMLLGVGIGFTTGYTVGLKEGKREGFIRGKIAARRSLESR
Ga0222712_1000461316	3300021963	Estuarine Water	MYTIQEVAIWMLLGVLAGFMAGYANGLREGKREGFIRGKVAARRNAEIR
Ga0255147_10296554	3300024289	Freshwater	EVAMWLLIGVGIGFVGGYTAGLKEGKREGFIRGKIAARRSLESR
Ga0255178_10144802	3300024298	Freshwater	MYTIGEVAMWLLIGVGIGFVGGYTAGLKEGKREGFIRGKIAARRSLESR
Ga0255148_10326891	3300024306	Freshwater	MYAFQEVAMWMLIGVLVGFTTGYTAGLKEGKREGFIRGKIAARRNAEIR
Ga0255142_10585672	3300024352	Freshwater	AMWLLIGVGIGFVGGYTAGLKEGKREGFIRGKIAARRSLESR
Ga0255171_10475072	3300024354	Freshwater	MYAFQEVAMWMLIGVLVGFAAGYTAGLKEGKREGFIRGKIAARKIKEYRD
Ga0255151_10009752	3300024496	Freshwater	MWLLIGVGIGFVGGYTAGLKEGKREGFIRGKIAARRSLESR
Ga0255175_10733101	3300024509	Freshwater	GEVAMWLLIGVGIGFVGGYTAGLKEGKREGFIRGKIAARRSLESR
Ga0208644_13421962	3300025889	Aqueous	MYTLAETAMWMLLGVGIGFATGYTVGLKEGKREGFIRGKIAARKSLESR
Ga0208644_13624242	3300025889	Aqueous	MYAFQEVAAWMLLGVLVGFTAGYTLGLKDGKREGFIRGKIAARKNVEIR
Ga0209599_100508391	3300027710	Deep Subsurface	MYAFQEVAMWMLIGVAIGFTFGYTLGLKEGKREGYIRGKIAGRRVAEYRD
Ga0209599_101382321	3300027710	Deep Subsurface	MYTIGEVAMWMMLGVLVGFTSGYTLGLKEGKREGFIRGKIAARKNMEVR
Ga0209599_102148561	3300027710	Deep Subsurface	YTIAEVGMWILIASTMGFTIGYTVGLKEGKREGFIRGKIAARRSLESR
Ga0209442_12762511	3300027732	Freshwater Lake	LLIGVLMGFISGYTLGLKEGKREGFVRGKIAARKGDR
Ga0209087_10381063	3300027734	Freshwater Lake	MYTFQEVAMWILIGVFMGFIVGYTAGLKEGKREGFIRGKIASRRKVEIQ
Ga0209296_11065783	3300027759	Freshwater Lake	MYAFSEIVAWSLLGVLTGFTGGYASGFKEGKREGFIRGRIAASRKAVSQ
Ga0209134_101780462	3300027764	Freshwater Lake	MYSIGEVAMWLLIGVAMGFTFGYTAGLKEGKREGFIRGKIAARKAVR
Ga0209230_106149322	3300027836	Freshwater And Sediment	MYTLQEVAMWMLLGVGIGFASGYTAGLKEGKREGFIRGKIAARKAVK
Ga0209253_104066332	3300027900	Freshwater Lake Sediment	MYTFQEVAMWMLLGVAIGFISGYTAGLKEGKREGFIRGKIAARRNAEIR
Ga0209191_10795634	3300027969	Freshwater Lake	MYAFHEVAMWMLLGVLVGFTAGYTAGLKEGKREGFIRGKIAARRNQEIR
Ga0209401_10453966	3300027971	Freshwater Lake	MYTFQEVAMWILLGVFSGFIVGYTAGLKEGKREGFIRGKIASRRKAEIQ
Ga0247723_100156016	3300028025	Deep Subsurface Sediment	MYTIAEVGMWILIASTMGFTIGYTVGLKEGKREGFIRGKIAARRSLESR
Ga0247723_10722242	3300028025	Deep Subsurface Sediment	MYTFQEVAMWMLMGVAIGFTFGYTLGLKEGKREGYIRGKIAGRRVSEYRD
Ga0304730_10278848	3300028394	Freshwater Lake	MYTFQEVAMWILIGVLMGFIVGYTAGLKEGKREGFIRGKIASRRKAEIQ
Ga0315907_100583537	3300031758	Freshwater	MYTIMEVAAWMMLGILTGFTGGYTLGLKEGKREGFIRGKIAARKAVNQ
Ga0315900_101238992	3300031787	Freshwater	MYAIQEVAMWMLLGVLTGFVSGYTLGLKEGKREGFIRGKIAARKSLESR
Ga0315909_1000993914	3300031857	Freshwater	MYAFQEVAMWMLLGILSGFTGGYTLGLKEGKREGYIRGKIAGRRNAEYRD
Ga0315909_100975795	3300031857	Freshwater	MYAFQEVAMWMLLGVLTGFVGGYSLGLKEGKREGFIRGKIAARKNAETR
Ga0315909_109181262	3300031857	Freshwater	MYAFQEVAMWMLLGVLTGFVGGYTLGQKDGKREGYIRGKIAGSRKAEYRD
Ga0315904_103010212	3300031951	Freshwater	MEVAAWMMLGILTGFTGGYTLGLKEGKREGFIRGKIAARKAVNQ
Ga0315903_110180342	3300032116	Freshwater	MYTIMEVAAWMMLGILTGFTGGYTLGLKEGKREGFIRGKIAARKNMEVR
Ga0334994_0003672_2817_2960	3300033993	Freshwater	MYSIGEVAMWLLIGVAIGFTFGYTAGLKEGKREGFIRGKIAARKAVQ
Ga0334994_0007172_5451_5600	3300033993	Freshwater	MYSIGEVAMWILISSLMGFTIGYTVGLKEGKREGFIRGKIAARKSLESR
Ga0334994_0225707_323_472	3300033993	Freshwater	MYALQEVAAWMLFGVLTGFMSGYAIGRREGKREGFIRGKVAARRNVEIR
Ga0334994_0339316_201_353	3300033993	Freshwater	MYAFQEVAMWMLLGVLTGFVGGYSLGMKEGKREGFIRGKIAARTLKEYRD
Ga0334994_0396617_318_464	3300033993	Freshwater	MMYSIGEVAMWLLIGVAIGFTFGYTAGLKEGKREGFIRGKIAARKAVR
Ga0334987_0003657_2947_3096	3300034061	Freshwater	MYALQEVAAWMLFGVLAGFTGGYTLGLKEGKREGFIRGRIAGRKNAEIR
Ga0334995_0069459_2547_2696	3300034062	Freshwater	MYAFQEVAMWMLLGVLTGFVGGYSIGLKEGKREGFIRGKIAARKNMEQR
Ga0334995_0766769_287_430	3300034062	Freshwater	MYALQEVAAWMLLGVLAGFTGGYTLGLKEGKREGFVRGKIAARKEIR
Ga0335012_0302449_683_811	3300034093	Freshwater	MYAFQEVAMWMLLGVLAGFTGGYTMGLKDGKREGFIRGKIAGR
Ga0335027_0002783_2947_3096	3300034101	Freshwater	MYALQEVAAWMLFGVLAGFTSGYALGLKEGKREGFIRGRIAGRKNAEIR
Ga0335027_0003316_11563_11715	3300034101	Freshwater	MYAFQEVAMWMLFGVFTGFMAGYAIGRKEGKREGFIRGRIAANRKAEYRD
Ga0335027_0044952_3496_3606	3300034101	Freshwater	MWLLIGVAIGFTFGYTAGLKEGKREGFIRGKIAARKA
Ga0335027_0145720_511_654	3300034101	Freshwater	MYSIGEVAMWLLIGVAIGFTAGYTAGLKEGKREGFIRGKIAARKAVR
Ga0335029_0002362_4465_4614	3300034102	Freshwater	MYAFQEVAMWMLLGVLVGFTAGYTLGLKDGKREGFIRGKIAGRKNVEIQ
Ga0335029_0003183_1318_1470	3300034102	Freshwater	MYTIMEVAAWMMLGILTGFTGGYTLGQKEGKREGYIRGKIAGSRKAEYRD
Ga0335029_0140794_427_579	3300034102	Freshwater	MYAFQEVAMWMLLGVLTGFVGGYSLGMKEGKREGFIRGKIAARTIREYRD
Ga0335030_0006139_2332_2481	3300034103	Freshwater	MYAFQEVAMWMLFGVFTGFMAGYAIGRKEGKREGFIRGKVAARRNAEIR
Ga0335031_0070341_10_135	3300034104	Freshwater	MWMLLGVLAGFTAGYTMGLKDGKREGFIRGKIAGRKNAEIR
Ga0335031_0142165_1379_1522	3300034104	Freshwater	MYSIGEVAMWLLIGVAIGFTSGYTAGLKEGKREGFIRGKIAARKAVR
Ga0335031_0258180_143_292	3300034104	Freshwater	MYAFQEVAMWMLLGVLTGFVGGYSIGIKEGKREGFIRGKIAARKNMEQR
Ga0335031_0487980_62_211	3300034104	Freshwater	MYAFQEVAMWMLLGVLAGFTGGYTMGLKDGKREGFIRGKIAGRKNAEIR
Ga0335066_0306107_766_897	3300034112	Freshwater	MYTIAEVGMWILIASTMGFTIGYTVGLKEGKREGFIRGKIAARR
Ga0335058_0041634_33_182	3300034121	Freshwater	MYAFQEVAMWMLLGVLAGFTAGYTMGLKDGKREGFIRGKIAARKNAESR

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F085385

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences