Metagenome / Metatranscriptome Family F085366

Basic Information
Family ID	F085366
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	66 residues
Representative Sequence	MANMDKNEPKGYGYGNSAKMAGNPAPEMKSNGSVKNRIPDAMTNKVGKDAKFEGGKSSGVCYTHDRKSYQ
Number of Associated Samples	77
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	87.39 %
% of genes near scaffold ends (potentially truncated)	17.12 %
% of genes from short scaffolds (< 2000 bps)	76.58 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.12

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Duplodnaviria (74.775 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (48.649 % of family members)
Environment Ontology (ENVO)	Unclassified (71.171 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (77.477 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78. 1JGI25908J49247_101047081 2Ga0066177_102235643 3Ga0065861_10690651 4Ga0066222_11129104 5Ga0069718_151932292 6Ga0007794_100892531 7Ga0007796_100055557 8Ga0049081_100724252 9Ga0075465_100781051 10Ga0070749_105467392 11Ga0070748_10364531 12Ga0102859_10726982 13Ga0108970_115754646 14Ga0114973_103770522 15Ga0114962_101879243 16Ga0114962_104411561 17Ga0114980_101356391 18Ga0114980_103523671 19Ga0114980_105988071 20Ga0114980_106058241 21Ga0114968_100042557 22Ga0114968_100184572 23Ga0114968_100268277 24Ga0114968_104341142 25Ga0114978_1000609515 26Ga0114978_103315402 27Ga0114978_106902452 28Ga0114981_104175541 29Ga0114975_100999096 30Ga0114975_101510354 31Ga0114975_104772661 32Ga0114975_106139493 33Ga0105104_108178821 34Ga0114979_1001423711 35Ga0114979_100561335 36Ga0114979_105851562 37Ga0114969_101667794 38Ga0114969_102221892 39Ga0114969_106314652 40Ga0114959_1000171421 41Ga0114974_104836141 42Ga0114976_102143382 43Ga0136644_106649132 44Ga0133913_132610374 45Ga0136709_10061644 46Ga0153697_107627 47Ga0153801_10412563 48Ga0164293_106870031 49Ga0164292_103442874 50Ga0164292_106102333 51Ga0119960_10156622 52Ga0119960_10713221 53Ga0181338_10015868 54Ga0181352_10848281 55Ga0181356_10770551 56Ga0181349_12109042 57Ga0181355_10213398 58Ga0181359_10074538 59Ga0181359_11512891 60Ga0181359_12487532 61Ga0211736_109965542 62Ga0211733_101686473 63Ga0211735_111926517 64Ga0194062_12500421 65Ga0213922_10448003 66Ga0181354_10106441 67Ga0244776_106512372 68Ga0255276_11190042 69Ga0207954_10213664 70Ga0208916_103056682 71Ga0208975_10575225 72Ga0208975_12051702 73Ga0209188_100147322 74Ga0209188_10594072 75Ga0209499_10743635 76Ga0209087_10115089 77Ga0209087_10886504 78Ga0209087_11292212 79Ga0209087_11717112 80Ga0209190_101228011 81Ga0209085_11623792 82Ga0209189_10052056 83Ga0209596_100263818 84Ga0209596_11100404 85Ga0209596_12402711 86Ga0209296_10005425 87Ga0209296_12501321 88Ga0209088_1000045513 89Ga0209088_101121131 90Ga0209088_102808782 91Ga0209134_100779703 92Ga0209500_102071232 93Ga0209500_102192853 94Ga0209253_101466744 95Ga0209400_100170722 96Ga0209400_11570381 97Ga0209401_10359023 98Ga0247723_10016578 99Ga0247723_11431041 100Ga0304729_11368001 101Ga0315291_114103882 102Ga0315293_103353921 103Ga0315288_112734852 104Ga0315288_112869342 105Ga0315290_112481362 106Ga0315294_105733532 107Ga0315278_114414912 108Ga0315274_102370397 109Ga0315268_127690881 110Ga0315273_112200293 111Ga0335013_0402834_609_815
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78. 1JGI25908J49247_101047081 2Ga0065861_10690651 3Ga0069718_151932292 4Ga0049081_100724252 5Ga0114973_103770522 6Ga0114962_104411561 7Ga0114980_101356391 8Ga0114968_100268277 9Ga0114975_106139493 10Ga0164293_106870031 11Ga0315293_103353921 12Ga0315290_112481362
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70 1Ga0181349_12109042 2Ga0070748_10364531 3Ga0114980_106058241 4Ga0114978_103315402 5Ga0114979_100561335 6Ga0114969_102221892 7Ga0114976_102143382 8Ga0133913_132610374 9Ga0153801_10412563 10Ga0181338_10015868 11Ga0211733_101686473 12Ga0194062_12500421 13Ga0213922_10448003 14Ga0209087_11292212 15Ga0209596_100263818 16Ga0209596_12402711 17Ga0209401_10359023 18Ga0247723_10016578 19Ga0315291_114103882 20Ga0315293_103353921 21Ga0315288_112869342 22Ga0315278_114414912 23Ga0315268_127690881 24Ga0335013_0402834_609_815
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.08% β-sheet: 0.00% Coil/Unstructured: 95.92%
Feature Viewer
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.12
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.12
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Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF00166	Cpn10	27.03
PF16510	P22_portal	2.70
PF05772	NinB	1.80
PF02592	Vut_1	1.80
PF04404	ERF	1.80
PF02195	ParBc	1.80
PF04466	Terminase_3	1.80
PF11651	P22_CoatProtein	1.80
PF08291	Peptidase_M15_3	0.90
PF00145	DNA_methylase	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	27.03
COG1738	Queuosine precursor transporter YhhQ, DUF165 family	Translation, ribosomal structure and biogenesis [J]	1.80
COG1783	Phage terminase large subunit	Mobilome: prophages, transposons [X]	1.80
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	0.90
COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	Replication, recombination and repair [L]	0.90

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	10.81 %
Unclassified	root	N/A	0.00 %
Viruses	superkingdom	All Organisms → Viruses	89.19 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	10.81 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	74.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.41 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	74.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.41 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.01 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.41 %
Unclassified	root	N/A	0.00 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	74.77 %

Name	Rank	Taxonomy	Distribution
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.90 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	74.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.41 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.90 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	74.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.41 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.41 %
Unclassified	root	N/A	0.00 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	74.77 %

Scaffold	Taxonomy	Length	IMG/M Link
3300003277\|JGI25908J49247_10104708	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	679	Open in IMG/M
3300004096\|Ga0066177_10223564	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	779	Open in IMG/M
3300004448\|Ga0065861_1069065	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
3300004460\|Ga0066222_1112910	All Organisms → Viruses → Predicted Viral	1481	Open in IMG/M
3300004481\|Ga0069718_15193229	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	705	Open in IMG/M
3300004774\|Ga0007794_10089253	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	919	Open in IMG/M
3300004804\|Ga0007796_10005555	All Organisms → cellular organisms → Bacteria	4898	Open in IMG/M
3300005581\|Ga0049081_10072425	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1296	Open in IMG/M
3300006037\|Ga0075465_10078105	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	720	Open in IMG/M
3300006802\|Ga0070749_10546739	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	628	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.10%
Host-Associated	Host-Associated	0.90%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	97.30%
Plants	Host-Associated → Plants	0.90%
Terrestrial	Environmental → Terrestrial	1.80%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.80%
Freshwater	Environmental → Aquatic → Freshwater	90.09%
Leaf	Host-Associated → Plants → Leaf	0.90%
Marine	Environmental → Aquatic → Marine	7.21%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	5.41%
Creek	Environmental → Aquatic → Freshwater → Creek	0.90%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.80%
Lake	Environmental → Aquatic → Freshwater → Lake	65.77%
Lentic	Environmental → Aquatic → Freshwater → Lentic	17.12%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.90%
River	Environmental → Aquatic → Freshwater → River	0.90%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	2.70%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.80%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.80%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	9.01%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.90%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	56.76%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	16.22%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	5.41%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	2.70%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.80%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.90%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.90%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.90%
Aquatic	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Aquatic	1.80%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	3.60%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	1.80%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.80%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	0.90%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.60%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.60%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	2.70%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.90%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.90%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.90%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	0.90%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	48.65%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	10.81%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.90%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	2.70%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.90%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.80%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	9.01%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.90%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300004096	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 2)	Environmental	Open in IMG/M
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004460	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300004774	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA5M	Environmental	Open in IMG/M
3300004804	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA0M	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300006037	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_>0.8_DNA	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M

Showing 1 to 10 of 77 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25908J49247_101047081	3300003277	Freshwater Lake	MKKLTKDMMGYGNSAKLAGNPAPEMVSKGSVKNNIPKAMTNMVGADKKFDGGKSNGVCYTHDRKCYQD*
Ga0066177_102235643	3300004096	Freshwater Lake	DMMGYGNSAKLAGNPAPEMVSKGSVKNNIPKAMTNMVGADKKFDGGKSNGVCYTHDRKCYQD*
Ga0065861_10690651	3300004448	Marine	MKKLTKDMMGYGNSAKMAGNPVPDMKSNGSVKNNIPDAMSNKMGKDEKFEGGKREGSCYTHDRKSYQ*
Ga0066222_11129104	3300004460	Marine	MKKLTKDMMGYGNSAKMAGNPVPDMKSNSSVKNRIPDAMTNKVGKDEKFEGGKREGSCYTHDRKSYQ*
Ga0069718_151932292	3300004481	Sediment	MANMDKNEPKGYGYGNSAKLAGNPAPEMKSNGSVKNRIPDAMTNKVGKDAKFDGGKSSGTCYTHDRKSYQ*
Ga0007794_100892531	3300004774	Freshwater	DMMGYGNSAKMAGNPVPDMKSNGSVKNNIPDAMSNKMGKDEKFEGGKREGSCYTHDRKSYQ*
Ga0007796_100055557	3300004804	Freshwater	MKKLTKDMMGYGNSAKMAGNPVPDMKSNGSVKNNIPNAMTNKGKEEKFEGGKREGSCYTHDRKSYQ*
Ga0049081_100724252	3300005581	Freshwater Lentic	MNHMDKNQPAGYGNKAKMAGNPAPDMKSNGSVKNNIPNAMTNKMSGGNECTGGKSSGVCYTHNRKSCQ*
Ga0075465_100781051	3300006037	Aqueous	MKDMNGKYGYGNQAKMAGNPAPEMKSNGTVKNNIPKAMTNMVGADKKFDGGKTSGVAYVHDRKCYQD*
Ga0070749_105467392	3300006802	Aqueous	MANMDKNEPKGYGYGNSAKLVGNPAPEMKSNGSVKNRIPDAMTNKVGKDAKFDGGKSSGVCYTHDRKSYQ*
Ga0070748_10364531	3300006920	Aqueous	MKDMNSKYGYGNQAKMAGNPAPEMKSNGSVKNNIPKAMTNMVGADKKFDGGKTSGVAYVHDRKCYQD*
Ga0102859_10726982	3300007708	Estuarine	MMNKNEPKGYGYGNSAKLAGNPAPEMKSNGSVKNRIPDAMTNKVGKDAKFDGGKSSGTCYTHDRKSYQ*
Ga0108970_115754646	3300008055	Estuary	MKEMNGKYGYGNQAKMAGNPAPEMKTKGSVKNNIPKAMTNMVGADKKFDGGKSSGVAYVHDRKCYQD*
Ga0114973_103770522	3300009068	Freshwater Lake	MKLTKDMTGYGNTAKMSGNPVPDMKSNGSVKNNIPNAMSNQSGKENNCVGGKSSGVCYTHDRKSCQ*
Ga0114962_101879243	3300009151	Freshwater Lake	MKKLTKDMMGYGNSAKMAGNPTPDMKSNGSVKNNIPDAMSNKMGKDEKFEGGKREGSCYTHDRKSYQ*
Ga0114962_104411561	3300009151	Freshwater Lake	MKEMNGKYGYGNQAKLAGNPSPEMKSNGSVKNNIPKAMTNMVGADKKFDGGKTSGVAY
Ga0114980_101356391	3300009152	Freshwater Lake	MKQMTKDVMGYGNNAKMVGNPTPDMKSNGSVKNNIPNAMTNNVGKDNKCEGGKSSGTCYTHDRK
Ga0114980_103523671	3300009152	Freshwater Lake	MMNKNEPKGYGYGNSAKMVGNPAPEMKPNGSVKNRIPDAMTNKVGKDSKFEGGKSSGVCYTHDRKSYQ*
Ga0114980_105988071	3300009152	Freshwater Lake	MKEMNGEYGNKVKMAGNPAPEMKSNGSVKNNIPKAMTNMVGADKKFDGGKTSGVAYVHDRKCYQD*
Ga0114980_106058241	3300009152	Freshwater Lake	MQKLSKDMAGYGNTAKMAGNPTPDMKSKGSVKNNIPNAMSNKMGADNKCEGGKSMGVCYTHDRKSSQ*
Ga0114968_100042557	3300009155	Freshwater Lake	MKEMNGKYGYGNQAKLAGNPAPEMKSNGSVKNNIPKAMTNMVGADKKFDGGKTSGVAYVHDRKCYQD*
Ga0114968_100184572	3300009155	Freshwater Lake	MKKLTKDMMGYGNSAKMAGNPVPDMKSNGSVKNNIPDAMSNKMGKDEKFEGGKQEGTCYTHGRKSYQ*
Ga0114968_100268277	3300009155	Freshwater Lake	MANMMKNEPKGYGAQVSMKGNPAPDMKSNGSVKNNIPNAMTNKTGADKKFEGGKMSGICYTHDRKCYQD*
Ga0114968_104341142	3300009155	Freshwater Lake	MKKLTKDMMGYGNSAKMAGNPVPDMKSNGSVKKNIPDAMSNKMGKDEKFEGGKREGSCYTHDRKSYQ*
Ga0114978_1000609515	3300009159	Freshwater Lake	MKEMNGKYGYGNQAKMAGNPAPEMVSKGSVKNNIPKAMTNMVGADKKFDGGKTSGVAYVHDRKCYQD*
Ga0114978_103315402	3300009159	Freshwater Lake	MKLNKDMMGYGNSAKMAGNPTPDMKSNGSVKNRIPDAMTNKVGKDEKFEGGKREGSCYTHDRKSYQ*
Ga0114978_106902452	3300009159	Freshwater Lake	RNPMKEMNGKYGYGNQAKMAGNPAPEMVSKGSVKNNIPKAMTNMVGTDKKFDGGKSSGVAYVHDRKCYQD*
Ga0114981_104175541	3300009160	Freshwater Lake	MKEMNGKYGYGNQAKMAGNPAPEMVSKGSVKNNIPKAMTNMVGADKKFDGGKSSGVAYVHDRKCYQD*
Ga0114975_100999096	3300009164	Freshwater Lake	MKKLTKDMMGYGNSAKMAGNPVPDMKSNGSVKNNIPNAMTNKMGKEEKFEGGKKEGSCYTHDRKSYQ*
Ga0114975_101510354	3300009164	Freshwater Lake	MKLTKDMAGYGNTAKMSGNPVPDMKSNGSVKNNIPNAMTNKMGKDEKFEGGKQEGTCYVHDRKSSQ*
Ga0114975_104772661	3300009164	Freshwater Lake	MKKLTKDMMGYGNDVKMPGNPVPDMKSNGSVKNNIPNAMTNKGKEEKFEGGKREGSCYTHDRKSYQ*
Ga0114975_106139493	3300009164	Freshwater Lake	TAKMAGNPTPDMKSKGSVKNNIPNAMSNKMGADNKCEGGKSMGVCYTHDRKSSQ*
Ga0105104_108178821	3300009168	Freshwater Sediment	MMNKNEPKGYGYGNSAKMAGNPAPEMKPNGSVKNRIPDAMTNKVGKDSKFEGGKSSGVCYTHDRKS
Ga0114979_1001423711	3300009180	Freshwater Lake	MKDMNGKYGYGNQAKMAGNPAPEMKSNGSVKNNIPKAMTNMVGADKKFDGGKTSGVAYVHDRKCYQD*
Ga0114979_100561335	3300009180	Freshwater Lake	MKQMTKDVMGYGNNAKMVGNPTPDMKSNGSVKNNIPNAMTNNVGKDNKCEGGKSSGTCYTHDRKSYQ*
Ga0114979_105851562	3300009180	Freshwater Lake	MKKLTKDMMGYGNSAKMAGNPVPDMKSNGSVKNNIPDAMSNKMGKDEKFEGGKREGSCYTHDRK
Ga0114969_101667794	3300009181	Freshwater Lake	MQLTKDMAGYGNTAKMSANPVPDMKSNGSVKNNIPNAMTNKMGKDEKFEGGKQEGTCYVHDRKSSQ*
Ga0114969_102221892	3300009181	Freshwater Lake	MNHMDKSQPAGYGNKAKMAGNPAPDMKSNGSVKNNIPNAMTNKMPSGNECTGGKSSGVCYTHDRKSCQ*
Ga0114969_106314652	3300009181	Freshwater Lake	MDKSQPTGYGNKAKMAGNPAPDMKSNGSVKNNIPNAMTNKMSGGNECTGGKSNGVCYTHDRKSCQ*
Ga0114959_1000171421	3300009182	Freshwater Lake	MKEMNGKYGYGNQAKLAGNPSPEMKSNGSVKNNIPKAMTNMVGADKKFDGGKTSGVAYVHDRKCYQD*
Ga0114974_104836141	3300009183	Freshwater Lake	MKDMNGKYGYGNQAKMAGNPAPEMKSNGSVKNNIPKAMTNMVGADKKFDGGKTSGV
Ga0114976_102143382	3300009184	Freshwater Lake	MANLMKNEPAGYGYGNQVKMAGNPAPDMKKTGMVKKNIPDAMTNQTGKDAKFDGGKMNGCCYTHDRKSYQ*
Ga0136644_106649132	3300010334	Freshwater Lake	MDKNQPTGYGNKVKMAGNPAADMKSNGSVKNNIPKAMSNKMPSGNECTGGKSSGVCYTHDRKCYQ*
Ga0133913_132610374	3300010885	Freshwater Lake	MDKNQPAGYGNKVKMAGNPAPDMKSGEQGSAKKGIPNAMTNKTGADKKFEGGKMSGICYTHDRKCYQ*
Ga0136709_10061644	3300011184	Freshwater	MANMMKNEPKGYGTKVSMAGNPAPEMVSKGSVKNNIPKAMTNMVGADKKFDGGKTSGVAYVHDRKCYQ*
Ga0153697_107627	3300011334	Freshwater	MMDKNEPKGYGYGNSAKMAGNPAPEMKSNGSVKNRIPNAMTNNVGKDNKCEGGKSSGVCYTHDRKSYQ*
Ga0153801_10412563	3300012017	Freshwater	MKQMTKDMTGYGNSAKMAGNPTPDMKSKGSVKNNIPNAMSNKVGADNKFEGGKSSGVCYTHDRKSCQ*
Ga0164293_106870031	3300013004	Freshwater	MANMMKNEPKGYGTKVSMAGNPAPEMKTKGSVKNNIPKAITNMVGADKKFDGGKTSGV
Ga0164292_103442874	3300013005	Freshwater	MANMDKNEPKGYGYGNSAKLAGNPAPEMKSNGSVKNRIPDAMTNKVGKDAKFDGGKMSGTCYTHDRKSYQ*
Ga0164292_106102333	3300013005	Freshwater	MANMMKNEPKGYGTKVSMAGNPAPEMKTKGSVKNNIPKAITNMVGADKKFDGGKTS
Ga0119960_10156622	3300014811	Aquatic	MMNKNEPKGYGYGNSAKMAGNPAPEMKPNGSVKNRIPDAMTNKVGKDAKFDGGKSSGTCYTHDCKSYQ*
Ga0119960_10713221	3300014811	Aquatic	MKLTKDMAGYGNTAKMSSNPVPDMKSNGSVKNNIPNAMSNQSGKENNCVGGKSSGVCYTHDRKSCQ*
Ga0181338_10015868	3300015050	Freshwater Lake	MKKLTKDMMGYGNSAKLAGNPAPEMVNKGSVKNNIPKAMTNMVGADKKFDGGKSNGVCYTHDRKCYQD*
Ga0181352_10848281	3300017747	Freshwater Lake	MKKLTKDMMGNGNSAKLAGNPAPEMVSKGSVKNNIPKAMTNMVGADKKFDGGKSNGVCYTHDRKCYQD
Ga0181356_10770551	3300017761	Freshwater Lake	MGYGNSAKLAGNPAPEMVNKGSVKNNIPKAMTNMVGADKKFDGGKSNGVCYTHDRKCYQD
Ga0181349_12109042	3300017778	Freshwater Lake	MANMDKNEPKGYGYGNSAKMAGNPAPEMKSNGSVKNRIPDAMTNKVGKDAKFEGGKSSGVCYTHDRKSYQ
Ga0181355_10213398	3300017785	Freshwater Lake	MANMDKNEPKGYGYGNSAKMASNPAPEMKSNGSVKNRIPDAMTNKVGKDAKFDGGKSSGVCYTHDRKSYQ
Ga0181359_10074538	3300019784	Freshwater Lake	MKKLTKDMMGYGNSAKLAGNPAPEMVNKGSVKNNIPKAMTNMVGADKKFDGGKSNGVCYTHDRKCYQD
Ga0181359_11512891	3300019784	Freshwater Lake	MANMDKNEPKGYGYGNSAKMASNPAPEMKSNGSVKNRIPDAMTNKVGKDAKFDGGKSSGTCYTHDRKSYQ
Ga0181359_12487532	3300019784	Freshwater Lake	MNKNEPKGYGYGNSAKMAGNPAPEMKPNGSVKNRIPDAMTNKVGKDSKFEGGKSSGVCYTHDRKSYQ
Ga0211736_109965542	3300020151	Freshwater	MDKSQPTGYGNKAKMAGNPAPDMKSNGSVKNNIPNAMTNKMSGGNECTGGKSSGVCYTHDRKSYQ
Ga0211733_101686473	3300020160	Freshwater	MANLDKNQPKGYGNDVKMAGNPAPDMKSNGSTKNRIPDAMTNKVGKDAKFDGGKSSGTCYTHDRKSYQ
Ga0211735_111926517	3300020162	Freshwater	MANLDKNQPKGYGNDVKMAGNPAPDMKSNGSVKNRIPDAMTNKVGKDSKFEGGKSSGVCYTHDRKSYQ
Ga0194062_12500421	3300021069	Anoxic Zone Freshwater	MANMDKNQPAGYGNKVKMAGNPAPDMKSNGSVKNNIPNAMTNKMPSGNNCTGGKSSGVCYTHDRKCYQ
Ga0213922_10448003	3300021956	Freshwater	MANLMKNEPKGYGFGNKATLAGNPAPEMKSNGSVKNNIPNAMTNKTGADKKFDGGKTSGICYTHDRKCYQD
Ga0181354_10106441	3300022190	Freshwater Lake	MANMDKNEPKGYGYGNSAKMASNPAPEMKSNGSVKNRIPDAMTNKVGKDAKFDGGKSSGVCY
Ga0244776_106512372	3300024348	Estuarine	MMNKNEPKGYGYGNSAKLAGNPAPEMKSNGSVKNRIPDAMTNKVGKDAKFDGGKSSGTCYTHDRKSYQ
Ga0255276_11190042	3300024570	Freshwater	MANLMKNEPKGYGTKATMSGNPAPEMKSNGSAKNNIPNAMTNKTGADKKFEGGKMSGICYTHDRKCY
Ga0207954_10213664	3300025606	Freshwater	MKKLTKDMMGYGNSAKMAGNPVPDMKSNGSVKNNIPNAMTNKGKEEKFEGGKREGSCYTHDRKSYQ
Ga0208916_103056682	3300025896	Aqueous	MKDMNSKYGYGNQAKMAGNPAPEMKSNGTVKNNIPKAMTNMVGADKKFDGGKTSGVAYVHDRKCYQD
Ga0208975_10575225	3300027659	Freshwater Lentic	MNHMDKSQPTGYGNKAKMAGNPAPDMKSNGSVKNNIPNAMTNKMSGGNECTGGKSSGVCYTHNRKSCQ
Ga0208975_12051702	3300027659	Freshwater Lentic	MNHMDKNQPAGYGNKAKMAGNPAPDMKSNGSVKNNIPNAMTNKMSGGNECTGGKSSGVCYTHNRKSCQ
Ga0209188_100147322	3300027708	Freshwater Lake	MKEMNGKYGYGNQAKLAGNPSPEMKSNGSVKNNIPKAMTNMVGADKKFDGGKTSGVAYVHDRKCYQD
Ga0209188_10594072	3300027708	Freshwater Lake	MGYGNSAKMAGNPTPDMKSNGSVKNNIPDAMSNKMGKDEKFEGGKREGSCYTHDRKSYQ
Ga0209499_10743635	3300027712	Freshwater Lake	KDMMGYGNSAKMAGNPVPDMKSNGSVKNNIPDAMSNKMGKDEKFEGGKREGSCYTHDRKSYQ
Ga0209087_10115089	3300027734	Freshwater Lake	MKLNKDMMGYGNSAKMAGNPTPDMKSNGNVKNRIPDAMTNKVGKDEKFEGGKREGSCYTHDRKSYQ
Ga0209087_10886504	3300027734	Freshwater Lake	MKLTKDMAGYGNTAKMSGNPVPDMKSNGSVKNNIPNAMTNKMGKDEKFEGGKQEGTCYVHDRKSSQ
Ga0209087_11292212	3300027734	Freshwater Lake	MKKLTKDMMGYGNSAKMAGNPVPDMKSNGSVKNNIPNAMTNKMGKEEKFEGGKKEGSCYTHDRKSYQ
Ga0209087_11717112	3300027734	Freshwater Lake	MANLMKNEPAGYGYGNQVKMAGNPAPDMKKTGMVKKNIPDAMTNQTGKDAKFDGGKMNGVCYTHDRKSYQ
Ga0209190_101228011	3300027736	Freshwater Lake	MKEMNGKYGYGNQAKLAGNPAPEMKSNGSVKNNIPKAMTNMVGADKKFDGGKTSGVAYVHDRKCYQD
Ga0209085_11623792	3300027741	Freshwater Lake	MKKLTKDMMGYGNSAKMAGNPVPDMKSNGSVKNNIPDAMSNKMGKDEKFEGGKREGSCYTHDRKSYQ
Ga0209189_10052056	3300027747	Freshwater Lake	MKKLTKDMMGYGNSAKMAGNPTPDMKSNGSVKNNIPDAMSNKMGKDEKFEGGKREGSCYTHDRKSYQ
Ga0209596_100263818	3300027754	Freshwater Lake	MANMMKNEPKGYGAQVSMKGNPAPDMKSNGSVKNNIPNAMTNKTGADKKFEGGKMSGICYTHDRKCYQD
Ga0209596_11100404	3300027754	Freshwater Lake	MNHMDKSQPAGYGNKAKMAGNPAPDMKSNGSVKNNIPNAMTNKMPSGNECTGGKSSGVCYTHDRKSCQ
Ga0209596_12402711	3300027754	Freshwater Lake	MQLTKDMAGYGNTAKMSANPVPDMKSNGSVKNNIPNAMTNKMGKDEKFEGGKQEGTCYVHDRKSSQ
Ga0209296_10005425	3300027759	Freshwater Lake	MKKLTKDMMGYGNDVKMPGNPVPDMKSNGSVKNNIPNAMTNKGKEEKFEGGKREGSCYTHDRKSYQ
Ga0209296_12501321	3300027759	Freshwater Lake	MKDMNGKYGYGNQAKMAGNPAPEMKSNGSVKNNIPKAMTNMVGADKKFDGGKTSGVAYVHDRKCYQ
Ga0209088_1000045513	3300027763	Freshwater Lake	MQKLSKDMAGYGNTAKMAGNPTPDMKSKGSVKNNIPNAMSNKMGADNKCEGGKSMGVCYTHDRKSSQ
Ga0209088_101121131	3300027763	Freshwater Lake	MMNKNEPKGYGYGNNAKLVGNPAPEMKSNGTAKNNIPNAMTNKVGKDSKFEGGKSSGICYTHDR
Ga0209088_102808782	3300027763	Freshwater Lake	MMNKNEPKGYGYGNSAKMVGNPAPEMKPNGSVKNRIPDAMTNKVGKDSKFEGGKSSGVCYTHDRKSYQ
Ga0209134_100779703	3300027764	Freshwater Lake	MANMMKNEPKGYGTKVSMAGNPAPEMVSKGSVKNNIPKAMTNMVGADKKFDGGKSNGVCYTHDRKCYQD
Ga0209500_102071232	3300027782	Freshwater Lake	MGYGNSAKMAGNPVPDMKSNGSVKNNIPDAMSNKMGKDEKFEGGKREGSCYTHDRKSYQ
Ga0209500_102192853	3300027782	Freshwater Lake	MKEMNGKYGYGNQAKMAGNPAPEMVSKGSVKNNIPKAMTNMVGADKKFDGGKTSGVAYVHDRKCYQD
Ga0209253_101466744	3300027900	Freshwater Lake Sediment	MANMDKNEPKGYGYGNSAKMAGNPAPEMKPNGSVKNRIPDAMTNKVGKDSKFEGGKQSGVCYTHDRKSYQ
Ga0209400_100170722	3300027963	Freshwater Lake	MKKLTKDMMGYGNSAKMAGNPVPDMKSNGSVKNNIPDAMSNKMGKDEKFEGGKQEGTCYTHGRKSYQ
Ga0209400_11570381	3300027963	Freshwater Lake	MKKLTKDMMGYGNSAKMAGNPVPDMKSNGSVKKNIPDAMSNKMGKDEKFEGGKREGSCYTHDRKSYQ
Ga0209401_10359023	3300027971	Freshwater Lake	MKLTKDMTGYGNTAKMSGNPVPDMKSNGSVKNNIPNAMSNQSGKENNCVGGKSSGVCYTHDRKSCQ
Ga0247723_10016578	3300028025	Deep Subsurface Sediment	MKEMNSKYGYGNQAKMAGNPAPEMVSKGSVKNNIPKAMTNMVGADKKFDGGKSNGVCYTHDRKCYQD
Ga0247723_11431041	3300028025	Deep Subsurface Sediment	MANMDKNEPKGYGYGNSAKMSGNPAPEMKPNGSVKNRIPDAMTNKVGKDSKFEGGKQSGVCYTHDRKSYQ
Ga0304729_11368001	3300028392	Freshwater Lake	MGYGNSAKMAGNPVPDMKSNGSVKNNIPDAMSNKMGKDEKFEGGKREGSCYTHDRKS
Ga0315291_114103882	3300031707	Sediment	MMNKNEPKGYGYGNNVKMAGNPAPDMKSNGSVKNNIPNAMTNKVGKDSKFEGGKSSGICYTHDRKSCQ
Ga0315293_103353921	3300031746	Sediment	QMTKDMMGYGNSVKMAGNPAAETKSNGMAKNNIPNAMTNKVGKDSKFEGGKSSGICYTHDRKSCQ
Ga0315288_112734852	3300031772	Sediment	MMNKDQPAGYGNNVKMAGNPAPDMKSNGSVKNNIPNAMTNKVGKDSKFEGGKSSGICYTHDRKSCQ
Ga0315288_112869342	3300031772	Sediment	MMNKNEPKGYGYGNNVKMGGNPAPEMKSNGSVKNRIPNAMTNNVGKDNKCEGGKSSGVCYTHDRKSYQ
Ga0315290_112481362	3300031834	Sediment	MMNKDQPAGYGNNVKMAGNPAPDMKSNGSVKNNIPNAMTNKVGKDCSFEGGKMNGVCYTHARKSYQ
Ga0315294_105733532	3300031952	Sediment	MANLDKNQPAGYGNNVKMAGNPAPDMKSNGSVKNNIPNAMTNKVGKDCSFEGGKMNGTCYTHDRKSYQ
Ga0315278_114414912	3300031997	Sediment	MAKMDKDQPAGYGNNVKMAGNPAPDMKSNGSVKNNIPNAMTNKVGKDCSFEGGKMNGVCYTHARKSYQ
Ga0315274_102370397	3300031999	Sediment	MNKNEPKGYGYGNNVKMGGNPAPEMKSNGSVKNRIPNAMTNNVGKDNKCEGGKSSGVCYTHDRKSYQ
Ga0315268_127690881	3300032173	Sediment	MNHMDKNLPTGYGNKAKMAGNPAPDMKSNGSVKNNIPNAMTNKMSGGNECTGGKSNGVCYTHNRKSCQ
Ga0315273_112200293	3300032516	Sediment	MMNKDQPAGYGNNVKMAGNPAPDMKLNGSVKNNIPNAMTNKVGKDCSFEGGKMNGVCYTHARKSYQ
Ga0335013_0402834_609_815	3300034284	Freshwater	MANMMKNEPKGYGTKVSMAGNPAPEMKTKGSVKNNIPKAMTNMVGADKKFDGGKTSGVAYVHDRKCYQ

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085366

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences