Metagenome Family F085332

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085332
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	112 residues
Representative Sequence	MESLIDQRYRLDLIRYHLDGFEEKQGKAVFFCPLCQFSRPQGKYVQKKGGMFWCAQWNAWRFNCAKCLPMTSMYRYLDKVNPELAKRYQRERWHSGTTGWGHDCPS
Number of Associated Samples	40
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	34.55 %
% of genes near scaffold ends (potentially truncated)	32.43 %
% of genes from short scaffolds (< 2000 bps)	77.48 %
Associated GOLD sequencing projects	38
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (35.135 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (73.874 % of family members)
Environment Ontology (ENVO)	Unclassified (88.288 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (90.090 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.85% β-sheet: 17.16% Coil/Unstructured: 52.99%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.76
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.76
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
g.41.3.2: DNA primase zinc finger	d1d0qa_	1d0q	0.63293
d.153.1.0: automated matches	d6qm7b_	6qm7	0.54224
d.82.2.1: Frataxin-like	d3t3la_	3t3l	0.5409
d.153.1.0: automated matches	d5le5m_	5le5	0.53976
d.153.1.4: Proteasome subunits	d5le5g_	5le5	0.53348

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF13946	DUF4214	7.21
PF05930	Phage_AlpA	1.80
PF00589	Phage_integrase	1.80
PF13005	zf-IS66	0.90
PF03331	LpxC	0.90
PF05050	Methyltransf_21	0.90
PF02310	B12-binding	0.90
PF00353	HemolysinCabind	0.90
PF13683	rve_3	0.90
PF13443	HTH_26	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG3311	DNA-binding transcriptional regulator AlpA	Transcription [K]	1.80
COG0774	UDP-3-O-acyl-N-acetylglucosamine deacetylase	Cell wall/membrane/envelope biogenesis [M]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.86 %
Unclassified	root	N/A	35.14 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	40.54 %
Unclassified	root	N/A	35.14 %
Viruses	superkingdom	All Organisms → Viruses	24.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.14 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	28.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.32 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	11.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.14 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	25.23 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.32 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	11.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.14 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	25.23 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.32 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	11.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.14 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	25.23 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.32 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	11.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.32 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	23.42 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	11.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.32 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	11.71 %
Synechococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae	7.21 %
Prochlorococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.32 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	11.71 %
Synechococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus	7.21 %
Prochlorococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.32 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	11.71 %
unclassified Synechococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus	2.70 %
unclassified Prochlorococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → unclassified Prochlorococcus	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.32 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	11.71 %
Synechococcus sp. LA31	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus → Synechococcus sp. LA31	0.90 %
Prochlorococcus sp. MIT 0604	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → unclassified Prochlorococcus → Prochlorococcus sp. MIT 0604	0.90 %
Synechococcus sp. CBW1006	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus → Synechococcus sp. CBW1006	0.90 %
Synechococcus sp. CB0101	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus → Synechococcus sp. CB0101	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003430\|JGI25921J50272_10088019	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	665	Open in IMG/M
3300004112\|Ga0065166_10009425	All Organisms → Viruses → Predicted Viral	2587	Open in IMG/M
3300004112\|Ga0065166_10455546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → unclassified Prochlorococcus → Prochlorococcus sp. MIT 0604	539	Open in IMG/M
3300004112\|Ga0065166_10484603	Not Available	523	Open in IMG/M
3300004112\|Ga0065166_10525387	Not Available	503	Open in IMG/M
3300005662\|Ga0078894_10013197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	6537	Open in IMG/M
3300005662\|Ga0078894_10246669	All Organisms → Viruses → Predicted Viral	1619	Open in IMG/M
3300005662\|Ga0078894_10467890	Not Available	1134	Open in IMG/M
3300005662\|Ga0078894_10925789	Not Available	754	Open in IMG/M
3300005662\|Ga0078894_11004943	Not Available	717	Open in IMG/M
3300005662\|Ga0078894_11357150	Not Available	595	Open in IMG/M
3300005662\|Ga0078894_11373221	Not Available	591	Open in IMG/M
3300005805\|Ga0079957_1133540	All Organisms → Viruses → Predicted Viral	1290	Open in IMG/M
3300006810\|Ga0070754_10076845	All Organisms → Viruses → Predicted Viral	1693	Open in IMG/M
3300007202\|Ga0103274_1146350	All Organisms → Viruses → Predicted Viral	1282	Open in IMG/M
3300007216\|Ga0103961_1107434	All Organisms → Viruses → Predicted Viral	2777	Open in IMG/M
3300007345\|Ga0070752_1104909	All Organisms → Viruses → Predicted Viral	1206	Open in IMG/M
3300008055\|Ga0108970_11567177	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	664	Open in IMG/M
3300009450\|Ga0127391_1032930	All Organisms → Viruses → Predicted Viral	1040	Open in IMG/M
3300009450\|Ga0127391_1114333	Not Available	510	Open in IMG/M
3300009451\|Ga0127402_1033820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	1163	Open in IMG/M
3300009474\|Ga0127390_1058481	All Organisms → Viruses → Predicted Viral	1065	Open in IMG/M
3300009504\|Ga0114946_10162136	All Organisms → Viruses → Predicted Viral	1221	Open in IMG/M
3300010354\|Ga0129333_10232192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus → Synechococcus sp. CBW1006	1669	Open in IMG/M
3300010354\|Ga0129333_11419385	Not Available	570	Open in IMG/M
3300017788\|Ga0169931_11047462	Not Available	500	Open in IMG/M
3300020074\|Ga0194113_10006990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	14180	Open in IMG/M
3300020074\|Ga0194113_10176253	All Organisms → Viruses → Predicted Viral	1741	Open in IMG/M
3300020074\|Ga0194113_10435236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	955	Open in IMG/M
3300020083\|Ga0194111_10139133	Not Available	1871	Open in IMG/M
3300020083\|Ga0194111_10169219	All Organisms → cellular organisms → Bacteria	1640	Open in IMG/M
3300020083\|Ga0194111_10946576	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	508	Open in IMG/M
3300020084\|Ga0194110_10116293	All Organisms → Viruses → Predicted Viral	2172	Open in IMG/M
3300020084\|Ga0194110_10600676	Not Available	698	Open in IMG/M
3300020109\|Ga0194112_10138512	All Organisms → Viruses → Predicted Viral	2086	Open in IMG/M
3300020109\|Ga0194112_10845321	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	594	Open in IMG/M
3300020179\|Ga0194134_10035631	All Organisms → cellular organisms → Bacteria	2943	Open in IMG/M
3300020179\|Ga0194134_10038553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	2787	Open in IMG/M
3300020179\|Ga0194134_10039425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	2741	Open in IMG/M
3300020179\|Ga0194134_10047284	All Organisms → Viruses → Predicted Viral	2409	Open in IMG/M
3300020179\|Ga0194134_10392542	Not Available	515	Open in IMG/M
3300020183\|Ga0194115_10001209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus → Synechococcus sp. CB0101	33871	Open in IMG/M
3300020183\|Ga0194115_10046449	All Organisms → cellular organisms → Bacteria	2801	Open in IMG/M
3300020183\|Ga0194115_10123392	All Organisms → Viruses → Predicted Viral	1397	Open in IMG/M
3300020183\|Ga0194115_10243689	Not Available	855	Open in IMG/M
3300020183\|Ga0194115_10335149	Not Available	675	Open in IMG/M
3300020190\|Ga0194118_10155781	All Organisms → Viruses → Predicted Viral	1340	Open in IMG/M
3300020190\|Ga0194118_10183597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	1202	Open in IMG/M
3300020190\|Ga0194118_10191609	All Organisms → Viruses → Predicted Viral	1168	Open in IMG/M
3300020190\|Ga0194118_10205145	All Organisms → Viruses → Predicted Viral	1116	Open in IMG/M
3300020190\|Ga0194118_10413312	Not Available	678	Open in IMG/M
3300020190\|Ga0194118_10413754	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	677	Open in IMG/M
3300020190\|Ga0194118_10502414	Not Available	582	Open in IMG/M
3300020190\|Ga0194118_10549416	Not Available	541	Open in IMG/M
3300020196\|Ga0194124_10017939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	5138	Open in IMG/M
3300020196\|Ga0194124_10040483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	3005	Open in IMG/M
3300020196\|Ga0194124_10053280	Not Available	2513	Open in IMG/M
3300020196\|Ga0194124_10113042	All Organisms → Viruses → Predicted Viral	1521	Open in IMG/M
3300020196\|Ga0194124_10122575	Not Available	1440	Open in IMG/M
3300020196\|Ga0194124_10175251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus	1129	Open in IMG/M
3300020196\|Ga0194124_10407560	Not Available	620	Open in IMG/M
3300020197\|Ga0194128_10420927	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300020200\|Ga0194121_10134548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	1471	Open in IMG/M
3300020200\|Ga0194121_10228943	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	985	Open in IMG/M
3300020204\|Ga0194116_10050120	All Organisms → Viruses → Predicted Viral	2972	Open in IMG/M
3300020204\|Ga0194116_10069994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	2364	Open in IMG/M
3300020204\|Ga0194116_10274542	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	904	Open in IMG/M
3300020204\|Ga0194116_10397057	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	683	Open in IMG/M
3300020204\|Ga0194116_10461283	Not Available	609	Open in IMG/M
3300020220\|Ga0194119_10095253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus	2379	Open in IMG/M
3300020220\|Ga0194119_10102839	Not Available	2253	Open in IMG/M
3300020220\|Ga0194119_10205204	Not Available	1394	Open in IMG/M
3300020220\|Ga0194119_10248915	Not Available	1221	Open in IMG/M
3300020220\|Ga0194119_10254934	All Organisms → Viruses → Predicted Viral	1201	Open in IMG/M
3300020220\|Ga0194119_10834184	Not Available	542	Open in IMG/M
3300020221\|Ga0194127_10738762	Not Available	613	Open in IMG/M
3300020222\|Ga0194125_10077191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2935	Open in IMG/M
3300020222\|Ga0194125_10192370	All Organisms → Viruses → Predicted Viral	1475	Open in IMG/M
3300020222\|Ga0194125_10848662	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	517	Open in IMG/M
3300020603\|Ga0194126_10565343	Not Available	687	Open in IMG/M
3300021091\|Ga0194133_10344173	Not Available	867	Open in IMG/M
3300021091\|Ga0194133_10618901	Not Available	519	Open in IMG/M
3300021091\|Ga0194133_10631632	Not Available	510	Open in IMG/M
3300021092\|Ga0194122_10198353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	1058	Open in IMG/M
3300021093\|Ga0194123_10035368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	3512	Open in IMG/M
3300021093\|Ga0194123_10084677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	1891	Open in IMG/M
3300021093\|Ga0194123_10136272	All Organisms → Viruses → Predicted Viral	1347	Open in IMG/M
3300021093\|Ga0194123_10154887	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1230	Open in IMG/M
3300021093\|Ga0194123_10181530	All Organisms → Viruses → Predicted Viral	1097	Open in IMG/M
3300021093\|Ga0194123_10208683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus → Synechococcus sp. LA31	993	Open in IMG/M
3300021093\|Ga0194123_10223456	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	946	Open in IMG/M
3300021093\|Ga0194123_10233382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	917	Open in IMG/M
3300021093\|Ga0194123_10236793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	908	Open in IMG/M
3300021093\|Ga0194123_10296846	Not Available	774	Open in IMG/M
3300021093\|Ga0194123_10478268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus	556	Open in IMG/M
3300021093\|Ga0194123_10558243	Not Available	501	Open in IMG/M
3300021376\|Ga0194130_10025838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	4744	Open in IMG/M
3300021376\|Ga0194130_10124710	Not Available	1631	Open in IMG/M
3300021376\|Ga0194130_10177649	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1281	Open in IMG/M
3300021376\|Ga0194130_10424609	Not Available	699	Open in IMG/M
3300021376\|Ga0194130_10666090	Not Available	508	Open in IMG/M
3300021424\|Ga0194117_10090967	All Organisms → Viruses → Predicted Viral	1647	Open in IMG/M
3300021424\|Ga0194117_10147390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus	1203	Open in IMG/M
3300021424\|Ga0194117_10356561	Not Available	678	Open in IMG/M
3300021424\|Ga0194117_10364894	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	668	Open in IMG/M
3300021425\|Ga0213866_10119995	All Organisms → Viruses → Predicted Viral	1417	Open in IMG/M
3300023179\|Ga0214923_10022923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus	5487	Open in IMG/M
3300033981\|Ga0334982_0143265	All Organisms → Viruses → Predicted Viral	1223	Open in IMG/M
3300034066\|Ga0335019_0056557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	2677	Open in IMG/M
3300034119\|Ga0335054_0401080	Not Available	784	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.10%
Host-Associated	Host-Associated	0.90%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.10%
Plants	Host-Associated → Plants	0.90%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	90.99%
Marine	Environmental → Aquatic → Marine	4.50%
Unclassified	Environmental → Aquatic → Unclassified	3.60%
Leaf	Host-Associated → Plants → Leaf	0.90%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	79.28%
Lentic	Environmental → Aquatic → Freshwater → Lentic	10.81%
Coastal	Environmental → Aquatic → Marine → Coastal	4.50%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	3.60%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.90%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	79.28%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	10.81%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	4.50%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	3.60%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	73.87%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	10.81%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	4.50%
Meromictic Pond	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Meromictic Pond	3.60%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.80%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.80%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.90%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	0.90%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.90%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003430	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD	Environmental	Open in IMG/M
3300004112	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300007202	Combined Assembly of cyanobacterial bloom in Marina Bay water reservoir, Singapore (Monthly Sampling-Site C) 9 sequencing projects	Environmental	Open in IMG/M
3300007216	Combined Assembly of cyanobacterial bloom in Punggol water reservoir, Singapore (Diel cycle-Surface and Bottom layer) 16 sequencing projects	Environmental	Open in IMG/M
3300007345	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30	Environmental	Open in IMG/M
3300008055	Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393	Host-Associated	Open in IMG/M
3300009450	Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 4m depth; DNA IDBA-UD	Environmental	Open in IMG/M
3300009451	Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 8m depth; DNA IDBA-UD	Environmental	Open in IMG/M
3300009474	Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 3m depth; DNA IDBA-UD	Environmental	Open in IMG/M
3300009504	Lake sediment microbial communities from Walker lake, Nevada to study Microbial Dark Matter (Phase II) - Walker Lake 11/02/13 Deep Sediment	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300017788	Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_15m_20L	Environmental	Open in IMG/M
3300020074	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200m	Environmental	Open in IMG/M
3300020083	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015033 Kigoma Deep Cast 300m	Environmental	Open in IMG/M
3300020084	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015032 Kigoma Deep Cast 1200m	Environmental	Open in IMG/M
3300020109	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015016 Mahale Deep Cast 400m	Environmental	Open in IMG/M
3300020179	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015056 Kigoma Offshore 0m	Environmental	Open in IMG/M
3300020183	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015002 Mahale S4 surface	Environmental	Open in IMG/M
3300020190	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015013 Mahale N5 surface	Environmental	Open in IMG/M
3300020196	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015031 Kigoma Deep Cast 0m	Environmental	Open in IMG/M
3300020197	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015037 Kigoma Deep Cast 65m	Environmental	Open in IMG/M
3300020200	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015020 Mahale Deep Cast 50m	Environmental	Open in IMG/M
3300020204	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015008 Mahale S9 surface	Environmental	Open in IMG/M
3300020220	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015018 Mahale Deep Cast 100m	Environmental	Open in IMG/M
3300020221	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015036 Kigoma Deep Cast 100m	Environmental	Open in IMG/M
3300020222	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015034 Kigoma Deep Cast 250m	Environmental	Open in IMG/M
3300020603	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015035 Kigoma Deep Cast 150m	Environmental	Open in IMG/M
3300021091	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015055 Kigoma Offshore 40m	Environmental	Open in IMG/M
3300021092	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015021 Mahale Deep Cast 10m	Environmental	Open in IMG/M
3300021093	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015023 Mahale A surface	Environmental	Open in IMG/M
3300021376	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015050 Kigoma 12 surface	Environmental	Open in IMG/M
3300021424	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015009 Mahale N1 surface	Environmental	Open in IMG/M
3300021425	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284	Environmental	Open in IMG/M
3300023179	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510	Environmental	Open in IMG/M
3300033981	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011	Environmental	Open in IMG/M
3300034066	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087	Environmental	Open in IMG/M
3300034119	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Jul2015-rr0166	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25921J50272_100880191	3300003430	Freshwater Lake	MESLIDQRYRLDLIRYHLEGFEEKQSKAVFFCPLCQFSRPQGKYVQKKGGMFWKPQWNAWRFNCAKCLPMTSMYRYLEKVNPELAKRYQRERWISGTTGWGHDCPSLNEQVLDVVPRVPRGS*
Ga0065166_100094256	3300004112	Freshwater Lake	MESMIDQRYRLDLIRYGLEGFEEKGSKAVFFCPLCQFSRPQGKYVQKKGGMFWIAQWNAWRFNCVKCLPMTSLYRFLEKVNPKMANRYQRDRYASGTTGKGHDCPTQRTRD*
Ga0065166_104555461	3300004112	Freshwater Lake	MESLIDQRYRLQLMQYYLDGIEEKGSKSVFYCPLCQCQRPAGKYVQKKGGMFWNHQWNAWRFNCVKCLPMTSLYRFLEKVNPGIANRYQRDRYASGTTGKGHDCPNPRDLALGALTGVSAGA*DRFLAVPAALVESPSPREWEALKGKA
Ga0065166_104846032	3300004112	Freshwater Lake	EKQGKAVFFCPLCQFSRPQGKYVQKKGAMFWIPQWNAWRFNCAKCLPLTSMYRYLEKVNPEMAKMYQRERWISGTTGKGRDCPSPMTIVGFATGSYGLKGTWVGGEY*
Ga0065166_105253871	3300004112	Freshwater Lake	MESLIDERYRLELIKYHLEGFEQKQGKSAFFCPLYQFSRPQGKYVQKKGGMFWIPQWNAWRFNCAKCLSMTSMYRYMEKVNPVMARRYQRDRWTSGTTGKGRDCPTPRVQDFS*
Ga0078894_1001319712	3300005662	Freshwater Lake	MESLIDQRYRLELIQYHLDGYEEKQGKAVFFCPLCQLQRPQGKYVQKKGGMFWIPQWNAWRFNCAKCLQMTSMYRYLEKVNPELARRYQKERYHSVTTGKGRDCPSPRELMGSAFDEIPKGA*
Ga0078894_102466694	3300005662	Freshwater Lake	MESLIDQRYRLDLIRYRLEGFEEKQGKAVFFCPLCQFSRPQGKYVQKKGAMFWIPQWNAWRFNCAKCLPLTSMYRYLEKVNPEMAKMYQRERWISGTTGKGRDCPSPMTIVGFATGSYGLKGTWVGGEY*
Ga0078894_104678902	3300005662	Freshwater Lake	MESMIDQRYRLELIRCHLDGFEEKTGKAVFFCPLCQAQRPSGKYVQKKGAMFWNHQWNAWRFNCVKCLPMTSLYRFLEKVNPGIANRYQRDRYASGTTGKGHDCPNPRDLALGALTGVSTGA*
Ga0078894_109257891	3300005662	Freshwater Lake	MESLIDQRYRLDLIRHHLDEFEEKQGKAVFFCPLCQFSRPQGHYVQKKGGMFWCQQWNGWRFNCMKCLRQATTMYHYLEKVNPEMAQRYQQDRWHSSTTGKGHDCPTPRVQDFS*
Ga0078894_110049431	3300005662	Freshwater Lake	MESLIDQRYRLQLMQYYLDGIEEKGSKSVFYCPLCQCQRPAGKYVQKKGGMFWNHQWNAWRFNCVKCLPMTSLYRFLEKVNPGIANRYQRDRYA
Ga0078894_113571501	3300005662	Freshwater Lake	LDGIEEKGGKSVFYCPLCQCQRPAGKYVQKKGGMFWNRQWNAWRFNCVKCLPMTGMYQYLMKVNPELGRRYQLDRYASGTTGKGHDCPNPRESLQNPSMPFQNAL*
Ga0078894_113732211	3300005662	Freshwater Lake	MESLIDQKYRLDLIRYHLDGFEEKQGKAIFFCPLCQFSRPQGKYVQKKGGMFWKPQWNAWRFNCAKCLQMTSMYRYLEKVNAEMARRYQYDRWQSGTTGKGHDCPAPKTRVAFLRIK*
Ga0079957_11335403	3300005805	Lake	MESLIDQRYRLDLIRYGLEGFEEKQGKAVFFCPLCQFSRPKGKYVQKKGGMFWKPQWNAWRFNCAKCLPMTSMYRYLEKVNPELAKRYQRERWISGTTGWGYDCPSPMKTVGFATGSHGLIDKIVRGEY*
Ga0070754_100768451	3300006810	Aqueous	MESVIDQRYRLDLIKYHLDGFENKKGKSVFYCPLCQISRPQGKYVQKKGGMFWCAQWNAWRFNCAKCLSMTSMYRYLQRVNPEMSRRYQRDRWDSGTTGKGHDCPRPQGAELLIKNKE
Ga0103274_11463505	3300007202	Freshwater Lake	MESIIDERYRLDLIQHHLEEVEDSSGKTMFFCPLCQSDRPKNKYTQKKGAKIWCDQWSAWRFNCMKCLRQATTMYRYLMLVNPEMARQYQRDRFHAGRTGKGSDCPDPVGIRT*
Ga0103961_11074341	3300007216	Freshwater Lake	MESLIDQRYRLELIQYHLDDCEEKQGKIVFFCPLCQFNRPKGKYVQKKGGMFWCAKWNAWRFNCMKCLHMTSMYRYLEKVNPEMSRRYQRERWNSETTGKGHDCPNPKV*
Ga0070752_11049091	3300007345	Aqueous	MESVIDQRYRLDLIKYHLDGFENKKGKLVFYCPLCQFSRPQGKYVQKKGGMFWCAQWNAWRFNCMKCLPMTSMYRYLQRVNPEMSRRYQRDRWDSGTTGKGHDCPTPMKTDGLAAAPHGLMGKHVEGGF*
Ga0108970_115671771	3300008055	Estuary	IDHRYRLDLIRYHLEGFEEKQGKAVFFCPICQFSRPKGKYVQKKGGMFWKPQWNAWRFNCAKCLPMTSMYRYLEKVNPELARRYQRERWISGTTGKGHDCPSPVKAVGCAPGSHRSTDKIVKGEY*
Ga0127391_10329301	3300009450	Meromictic Pond	MKQDPMENIIDQRYRLDLIKYHLDEVEEKSGKTVFFCPLCQFNRPKDKYTQKKGAMFWCEQWNAWRFNCVKCLWQATTMYRYLLLVNPVMAKQYQRDRFHAGRTGKGFDCPNPRGLKI*
Ga0127391_11143331	3300009450	Meromictic Pond	MESVIDQRYRLDLIEYHLDGFEDKQGKSVFFCPLCQVSRPHGKYVQKKGGMFWCAQWNAWRFNCMKCLPMTSMYRYLQKVNPEMSRRYQRDRWNSGTTGKGHDCPSPA*
Ga0127402_10338202	3300009451	Meromictic Pond	MENIIDERYRLDLIKYHLDEVEEKSGKTVFFCPLCQFNRPKDKYTQKKGAMFWCEQWNAWRFNCVKCLWQATTQYRYMLLVNPVMAKQYQRDRFHAGRTGKGFDCPNPRGLKI*
Ga0127390_10584813	3300009474	Meromictic Pond	MKQDPMENIIDQRYRLDLIKYHLDEVEEKSGKTVFFCPLCQFNRPKDKYTQKKGAMFWCEQWNAWRFNCVKCLWQATTMYRYLLLVNPVMAKQYQRDRFHAGRTGKGFDCPNPRGVKP*
Ga0114946_101621361	3300009504	Sediment	MVNMIDERYRLDLIQYHLEEVEDKQGKMIFFCPLCQFNRPKNKYNQKKGAMFWCEQWNTWRFNCKKCPLEPTTMYRYLLLVNPVMARQYQRDRFHAGRTGKGFDCPNPIGLKT*
Ga0129333_102321923	3300010354	Freshwater To Marine Saline Gradient	SLIDQRYRLDLIRYHLDGFEEKQGKAVFFCPLCQFSRPQGKYVQKKGGMFWCAQWNAWRFNCAKCLPMTTMYRYLEKVNPELARRYQRERWISGTTGKGHDCPNPAAYELS*
Ga0129333_114193851	3300010354	Freshwater To Marine Saline Gradient	MLNEYNMESLIDQRYRLDLIQHHLDEFEEKQGKAVFFCPLCQFLRPQGHYVQKKGGMFWNHQWNGWRFNCMKCLRQATTMYRYLEKVNPEMAQRYQQDRWYS
Ga0169931_110474622	3300017788	Freshwater	METLIDQRYRLDLIRYHLEGFEEKQGKAVFYCPLCQFSRPQGKYVQKKGGMFWMPQWNAWRFNCVKCLPMSSMYRYLERVNPDLARRYQQDRWHPGTTGKGHDCPMPQDLEGVR
Ga0194113_1000699012	3300020074	Freshwater Lake	MIDQRYRLELIKHHLDGFEERSGKAVFFCPLCQYSRPQGKYIQKKGGMFWIPQWNAWRFNCAKCLPMTSMYRYLEKVNPDMARRYQRERCFSGTTGKGHDCPDPLP
Ga0194113_101762531	3300020074	Freshwater Lake	MESKIDERYRLDLIRYHLEGFEEKNGKSIFYCPLCQNDRSPGKYYQKKGGMFWNSVCNSWRFNCAKCLPMTTMYRYLMLVNPLMGRACQRERWHSGTTGKGSDCPNPRF
Ga0194113_104352363	3300020074	Freshwater Lake	MESLIDKRYRLDLILYHLDGFEEKQGKAVFFCPLCQFSRPQGKYVQKKGGMFWCAQWNAWRFNCAKCLPMTSMYRYMEKVNPVMARRYQRERWIAGSTGKGHDCPSPITTVGCAPGSNRSTDKIVKGEY
Ga0194111_101391332	3300020083	Freshwater Lake	MESMIDQRYRLELIKHHLDGFEERSGKAVFFCPLCQYSRPQGKYIQKKGGMFWIPQWNAWRFNCAKCLPMTSMYRYLEKVNPDMARRYQRERCFSGTTGKGHDCPDPLP
Ga0194111_101692194	3300020083	Freshwater Lake	MESMIDQRYRLELIRYHLDGFEEKKCKAVFFCPLCQFSRPQGRYVQKKGGMFWNPSHNAWRFNCMKCLPATTMYRYLMLVNPVMGRAYQRERWHSGTTGKGRDCPNPDWNMQLG
Ga0194111_109465762	3300020083	Freshwater Lake	MIKNMESLIDQRYRLDLIRYHLDGFEEKQGKAVFFCPLCQFSRPQGKYVQKKGGMFWCAQWNAWRFNCDKCLPMTSMYRYLDKVNPELAKRYQRERWHSGTTGWGHDCPSPANVG
Ga0194110_101162933	3300020084	Freshwater Lake	MESKIDERYRLDLIRYHLEGFEEKNGKSIFYCPLCQNDRSLGKYYQKKGGMFWNSVCNSWRFNCKKCLPMTTMYRYLMLVNPLMGRAYQRERWHSGTTGKGSDCPNPRF
Ga0194110_106006761	3300020084	Freshwater Lake	MESLIDQRYRLDLIRYHLEGFEEKHGKAVFFCPLCQFSRPQGKYVQKKGGMFWIPQWNAWRFNCVKCLPMTSMYRFLEWVNPELARKYQRERWISGTTGKGHDYPSPKVNRSS
Ga0194112_101385121	3300020109	Freshwater Lake	MIKNMESLIDQRYRLDLIRYHLDGFEEKQGKAVFFCPLCQFSRPQGKYVQKKGGMFWCAQWNAWRFNCAKCLPMTSMYRYLEKVNSELARRYQHERWIAGSAGKGHDCPNPMNTLGFATGSHRLISKFAEGGY
Ga0194112_108453211	3300020109	Freshwater Lake	MESLIDQKYRLDLIRYHFEGYEEKKGKAVFFCPLCQFARPKGKYVQKKGGMFWCAQWNAWRFNCVKCLPMTSMYRYLEKVNPELARRYQRERWISGATGWGHDCPNPNHKQKY
Ga0194134_100356315	3300020179	Freshwater Lake	MIDQRYRLELIRYHLDGFEEKKCKAVFFCPLCQFSRPQGRYVQKKGGMFWNPSHNAWRFNCMKCLPATTMYRYLMLVNPVMGRAYQRERWHSGTTGKGRDCPNPDWNMQLG
Ga0194134_100385534	3300020179	Freshwater Lake	MESMIEQRYRLELIRYHLDGFEEKKCKAVFFCPLCQFSRPQGRYVQKKGGMFWNPSHNAWHFNCMKCLPATTMYRYLMLVNPVMGRAYQRERWHSGTTGKGEGLSEP
Ga0194134_100394254	3300020179	Freshwater Lake	MIDERYRFDLIRYHLEDFEVKNGKSIFYCPLCQQYRPPGKYCQKKGGMFWNPTFNAWRFNCMKCLPATTMYRYLMLVNPVMGRAYQRERWHSGTTGKGRDCPNATYRL
Ga0194134_100472844	3300020179	Freshwater Lake	MESVIDQRYRLDLIHYHLEGYEEKARKSIFFCPLCQLNRPQGKYIQRKGGMFWMPQWNAWRFNCVKCLPMTSMYRYLERVNPDLARRYQQDRWHSGTTGKGHDCPMPQDLEGVR
Ga0194134_103925421	3300020179	Freshwater Lake	MESMIDERYRLDLVKYHLEGFEQKQGKAVFFCPLCQFSRPQGKYVQKKGGMFWNPSHNAWRFNCMKCLPATTMYRYLMLVNPVMGRAYQR
Ga0194115_100012093	3300020183	Freshwater Lake	MESLIDQRYRLDLIRYHLEGFEEKQGKAVFFCPLCQFSRPQGKYVQKKGGMFWCAQWNAWRFNCAKCLPMTSMYRYLEKVNSELARRYQHERWIAGSAGKGHDCPNPMNTLGFATGSHRLISKFAEGGY
Ga0194115_100464492	3300020183	Freshwater Lake	MIDQRYRLELIRYHLDVFEEKKCKAVFFCPLCQFSRPQGRYVQKKGGMFWNPSHNAWRFNCMKCLPATTMYRYLMLVNPVMGRAYQRERWHSGTTGKGRDCPNPDWNMQLG
Ga0194115_101233923	3300020183	Freshwater Lake	MINLLCECNMESLIDQRYRLDLIRYHLEGFEEKQGKAVFFCPLCQFSRPQGKYVQKKGGMFWCAQWNAWRFNCAKCLPMTSMYRYMEKVNPVMARRYQRERWIAGSTGKGHDCPSPITTVGCAPGSNRSTDKIVKGEY
Ga0194115_102436891	3300020183	Freshwater Lake	LDLIKYHLEGFEQKQGKAVFFCPLCQFSRPQGKYVQKKGGMFWCAQWNAWRFNCAKCLPMISMYRYMEKVNPVMASRYQRERWISGTAGKGHDCPMPKVQGIF
Ga0194115_103351491	3300020183	Freshwater Lake	MESLIDQRYRLQLIEYHLEGFEEKSGKSVFFCPLCQFSRPQGKYVQKKGGMFWCAQWNAWSFNCAKCQPMTSMYRFLEKVNPELARRYQRERWNSGTTGKGHDCPLPALL
Ga0194118_101557811	3300020190	Freshwater Lake	MESKIDERYRLDLIRYHLEGFEEKNGKSIFYCPLCQNDRSPGKYYQKKGGMFWNSVCNSWRFNCAKCLPMTTMYRYLMLVNPLMGRACQRERWHSG
Ga0194118_101835973	3300020190	Freshwater Lake	MESLIDKRYRLDLIRYHLDGFEEKQGKAVFFCPLCQFSRPQGKYVQKKGGMFWCAQWNAWRFNCAKCLPMTSMYRYMEKVNPVMARRYQRERWIAGSTGKGHDCPSPITTVGCAPGSNRSTDKIVKGEY
Ga0194118_101916091	3300020190	Freshwater Lake	MESLIDQRYRLDLIRYHLEGFEEKQGKAVFFCPLCQFSRPQGKYVQKKGGMFWCAQWNAWRFNCTKCLPMTSMYRYMEKVNPVMARRYQRERWNSGTTGKGHDCPSPNQAE
Ga0194118_102051452	3300020190	Freshwater Lake	MESLIDQRYRLDLIRYHLDSFEEKQGKAVFFCPLCQFSRPKGKYVQKKGGMFWKPQWNAWRFNCAKCLPLTSMYRYLEKVNPELARRYQRERWFSGTTGWGHDCPIPKDKGINALVGVSTGV
Ga0194118_104133121	3300020190	Freshwater Lake	MESIIDQRYRLDLIHYHLEGFEEKQGKAVFFCPLCQFLRPQEKYVQKKGGIFWIPQWNSWRFNCAKCLPMTSMYRYLEKVNPELARRYQLERSTSGTTGKGHDCPTPMNCQ
Ga0194118_104137541	3300020190	Freshwater Lake	MESLIDQRYRLDLVRYHLEGVEEKQGKAVSFCPLCQFSRPQGKYVQKKGGMFWISQWNAWRFNCAKCLPMTSMYRYLEKVNPEMARRYQRERWISGTTGWGHDCPCPHTSKVVYRSVLDIRSEEVMP
Ga0194118_105024141	3300020190	Freshwater Lake	MIDERYRLDLVKYHLEGFEQKQGKAVFFCPLCQFSRPQGKYVQKKGGMFWNPSHNAWRFNCMKCLPATTMYRYLMLVNPVMGRAYQR
Ga0194118_105494161	3300020190	Freshwater Lake	MESLIDQRYRLDLIRYHLEGFEEKQGKAVFFCPLCQFSRPQGKYVQKKGGMFWCAQWNTWRFNCAKCLPMTSMYRYLEKVNSELARRYQHERWIAGSAGKGHDC
Ga0194124_100179395	3300020196	Freshwater Lake	MESLIDQRYRLDLIRYHLEGFEEKHGKAVFFCPLCQFSRPQGKYVQKKGGMFWIPQWNAWRFNCVKCLPMTSMYRFLEWANPELARKYQRERWISGTTGKGHDYPSPKVNRSS
Ga0194124_100404832	3300020196	Freshwater Lake	MESMIDERYRFDLIRYHLEDFEVKNGKSIFYCPLCQQYRPPGKYCQKKGGMFWNPTFNAWRFNCMKCLPATTMYRYLMLVNPVMGRAYQRERWHSGTTGKGRDCPNATYRL
Ga0194124_100532804	3300020196	Freshwater Lake	IRYHLEGFEEKHGKAVFFCPLCQFSRPQGKYVQKKGGMFWCAQWNAWRFNCMKCLPMTSMYRFLEKVNPEMSRKYQRDRWISGNTGRGHDCPSPKDQEFS
Ga0194124_101130422	3300020196	Freshwater Lake	MENIIDERYRLDLIQYHLEGVENKAGKSVFFCPLCQFNRPKNKYTQKKGGMFWCEQWNTWRFNCFKCLQNPTTMYRYLLLVNPAMARQYQRDRFHAGRTGKGSDCPNPVGLKT
Ga0194124_101225752	3300020196	Freshwater Lake	MESIIDQRYRLDLIHYHLEGFEEKQGKAVFFCPLCQFLRPQEKYVQKKGGMFWIPQWNSWRFNCAKCLPMTSMYRYLEKVNPELARRYQLERSTSGTTGKGHDCPTPMNCQ
Ga0194124_101752511	3300020196	Freshwater Lake	MESVIDQRYRLDLIHYHLEGYEEKARKSIFFCPLCQLNRPQGKYIQRKGGMFWMPQWNAWRFNCVKCLPMTSMYRYLERVNPDLAGRYQQDRWHSGTTGKGHDCPMPQDLEGVR
Ga0194124_104075601	3300020196	Freshwater Lake	MESSIDQRYRLDLIRYHLEGFEEKQSKAVFFCPLCQFNRPKGKYVQKKGGMFWCSQWNAWRFNRMKRLQMTSMYRFLEKINPELAKQYQKDRWHSGSTGKGHD
Ga0194128_104209272	3300020197	Freshwater Lake	RLELIRYHLDVFEEKKCKAVFFCPLCQFSRPQGRYVQKKGGMFWNPSHNAWRFNCMKCLPATTMYRYLMLVNPVMGRAYQRERWHSGTTGKGEGLSEP
Ga0194121_101345481	3300020200	Freshwater Lake	MESMIDQRYRLELIRYHLDGFEEKKCKAVFFCPLCQFSRPKGRYVQKKGGMFWNPSHNAWHFNCMKCLPATTMYRYLMLVNPVMGRAYQRERWHSGTTGKGRDCPNPDWNMQLG
Ga0194121_102289432	3300020200	Freshwater Lake	MIKNMESLIDQRYRLDLIRYHLDGFEEKQGKAVFFCPLCQFSRPQGKYVQKKGGMFWCAQWNAWRFNCAKCLPMTSMYRYLDKVNPELAKRYQRERWHSGTTGWGHDCPSLQ
Ga0194116_100501207	3300020204	Freshwater Lake	MESLIDQRYRLDLIRYHLDGFEEKQGKAVFFCPLCQFSRPQGKYVQKKGGMFWCAQWNAWRFNCAKCLPMTSMYRYLDKVNPELAKRYQRERWHSGTTGWGHDCPS
Ga0194116_100699946	3300020204	Freshwater Lake	MESRIDERYRLDLIRYHLEGFEVKNSKSIFYCPLCQKDRSPGKYCQKKGGMFWNQECNSWRFNCAKCLPMTTMYRYLMLVNPLMGRAYQRERWHSGTTGKGSDCPNPRF
Ga0194116_102745421	3300020204	Freshwater Lake	MESLIDQRYRLDLIRYHLEGFEEKQGKAVFFCPLCQFSRPKGKYFQKKGGMFWKPQWNAWRFNCAKCLPLTSMYRYLEKVNPELARRYQRERWFSGTTGWGHDCPIPKDKGINALVGVSTGV
Ga0194116_103970572	3300020204	Freshwater Lake	MESLIDQRYRLDLIRYHLEGVEEKQGKAVFFCPLCQFSRPQGKYVQKKGGMFWISQWNAWRFNCAKCLPMTSMYRYLVKVNPEIARRYQRERWMSGTTGKGHDCPNPMNTLGFATGSHRLIGKSAEGGY
Ga0194116_104612831	3300020204	Freshwater Lake	ALNGLNMESLIDQRYRLDLIQYHLEGFEKKQGKAVFFCPLCQISRPQGKYVQKKGGMFWIAQWNAWRFNCMKCLSMTSMYRYLEKINPELARKYQRERWTSGTTGKGHDCPAPYIR
Ga0194116_105781441	3300020204	Freshwater Lake	MESKIDERYRLDLIRYHLEGFEVKNGKSIFYCPLCQQNRSPGKYYQKKGGMFWNSVCNSWRFNCKKCLSMTTMYRYLMLVNP
Ga0194119_100952532	3300020220	Freshwater Lake	MIKNMESLIDQRYRLDLIRYHLDGFEEKQGKAVFFCPLCQFSRPQGKYVQKKGGMFWCAQWNAWRFNCAKCLPMTSMYRYLDKVNPELAKRYQRERWHSGTTGWGHDCPSPANVGEFTKVSHGFIDKHIEEES
Ga0194119_101028393	3300020220	Freshwater Lake	MESLIDQRYRLELIEYHLEGFEEKSGKSVFFCPLCQFSRPQGKYVQKKGGMFWCAQWNAWRFNCMKCLPMTSMYRYLEKVNPDLARRYQRERWISGTTGKCHDCPSPKVQHFS
Ga0194119_102052043	3300020220	Freshwater Lake	MESMIDQRYRLDLIQYHLEGFEQKQGKAVFFCPLCQFSRPQGKYVQKKGGMFWIPQWNAWRFNCMKCLPMTSVYRYLEKVNPEMARRYHQECWISGTTGKGHDCPTPNKLHRASINYLFLNSE
Ga0194119_102489151	3300020220	Freshwater Lake	MESLIDQRYRLDLIKYHLEGFEQKQGKAVFFCPLCQFSRPQGKYVQKKGGMFWCAQWNAWRFNCAKCLPMISMYRYMEKVNPVMASRYQRERWISGTAGKGHDCPMPKVQGIF
Ga0194119_102549341	3300020220	Freshwater Lake	MESLVDQRYRLDLIRYHLEGFEEKQGKAVFFCPLCQFSRPQGKYVQKKGGMFWCAQWNAWRFNCAKCLSMTSMYRYMEKVNPVMAERYRHDRWISGTTGKGHDCPTPQSVS
Ga0194119_108341841	3300020220	Freshwater Lake	MESLIDQRYRLDLIRYHLEGFEEKQSKAVFFCPLCQFSRPQGKYVQKKGGMFWCSQWNAWRFNCMKCLPMTSMYRFLQKVNPELAKRYQRERWSSGTTGKGHDCPTPKIQFNS
Ga0194127_107387621	3300020221	Freshwater Lake	DGFEERSGKAVFFCPLCQYSRPQGKYIQKKGGMFWIPQWNAWRFNCAKCLPMTSMYRYLEKVNPDMARRYQRERCFSGTTGKGHDCPDPLP
Ga0194125_100771911	3300020222	Freshwater Lake	MESLIDQRYRLELIEYHLEGFEEKSGKSVFFCPLCQFSRPQGKYVQKKGGMFWCAQWNAWRFNCVKCLPMTTTHRFLEKVNPELAMRYQRERWSSGTTGQCHDCPTPMVQHFY
Ga0194125_101923701	3300020222	Freshwater Lake	MESMIDQRYRLELIKHHLDGFEERSGKAVFFCPLCQYSRPQGKYIQKKGGMFWIPQWNAWRFNCAKCLPMTSMYRYLEKVNPDMARRYQRERCFSGTTGKGHDC
Ga0194125_108486621	3300020222	Freshwater Lake	INNMESLIDQRYRLDLIRYHLEGFEEKQGKSVFFCPLCQFSRPQGKYVQKKGGMFWCAQWNAWRFNCAKCLPMTSMYRYLDKVNPELAKRYQRERWHSGTTGWGHDCPSLQ
Ga0194126_105653431	3300020603	Freshwater Lake	MESMIDQRYRLELIKHHLDGFEERSGKAVFFCPLCQYSRPQGKYIQKKGGMFWIPQWNAWRFNCAKCLPMTSMYRYLEKVNPDMARRYQRER
Ga0194133_103441732	3300021091	Freshwater Lake	MESLIDQRYRLDLIRYHLEGFEEKHGKAVFFCPLCQFSRPQGKYVQKKGGMFWIPQWNAWRFNCVKCLPMTSMYRFLEWANPELARKYQRE
Ga0194133_106189011	3300021091	Freshwater Lake	MESRIDERYRLDLIRYHLEGFEVKNSKSIFYCPLCQKDRSPGKYCQKKGGMFWNQECNSWRFNCAKCLPMTTMYRYLMLVNPLMGRAYQ
Ga0194133_106316321	3300021091	Freshwater Lake	MESLLDERYRLKLIEYHLDGFEERSGKAVFFCPLCQFSRPQGKYVQKKGGMFWKPQWNAWRFNCAKCLPMTSMYRYLDKVNPELAKRYQRERWH
Ga0194122_101983531	3300021092	Freshwater Lake	MESLIDQRYRLDLVRYHLEGVEEKQGKAVSFCPLCQFSRPQGKYVQKKGGMFWISQWNAWRFNCAKCLPMTSMYRYLEKVNPEMARRYQRE
Ga0194123_100353686	3300021093	Freshwater Lake	MESMIDQRYRLELIRYHLDGFEEKKCKAVFFCPLCQFSRPQGRYVQKKGGMFWNPSHNAWHFNCMKCLPATTMYRYLMLVNPVMGRAYQRERWHSGTTGKGEGLSEP
Ga0194123_100846772	3300021093	Freshwater Lake	MESLIDQRYRLDLIRYHLEGVEEKQGKAVFFCPLCQFSRPQGKYVQKKGGMFWISQWNAWRFNCAKCLPMTSMYRYLEKVNPEMARRYQRERWISGTTGWGHDCPCPHTSKVVYRSVLDIRSEEVMP
Ga0194123_101362721	3300021093	Freshwater Lake	NMESLIDQRYRLDLIRYHLEGFEEKQGKAVFFCPLCQFSRPQGKYVQKKGGMFWCAQWNAWRFNCAKCLPMTSMYRYLEKVNSELARRYQHERWIAGSAGKGHDCPNPMNTLGFATGSHRLISKFAEGGY
Ga0194123_101548871	3300021093	Freshwater Lake	LEGFEEKQGKTVFFCALCQFSRPQGKYVHKKCGMFWCAQWNAWRFNCVKCLPMTSMYRYLEKVNPDLARKYQRERWIAGTTGWDHDCPNPMNILEFAP
Ga0194123_101815301	3300021093	Freshwater Lake	MESLIDQRYRLDLIRYHLEGFEEKQGKAVFFCPLCQFSRPQGKYVQKKGGMFWCAQWNTWRFNCAKCLPMTSMYRYLEKVNSELARRYQHERWIAGSAGKGHDCPNPMNTL
Ga0194123_102086831	3300021093	Freshwater Lake	INNMESLIDQRYRLDLIRYHLEGFEEKQRKSVFYCPLCQFSRPQGKYVQKKGGMFWCAKWNAWRFNCIKCLPMNSMYRFLERLNPELARRYQRERWISGTTGKGHDCPNTNAMSKPTS
Ga0194123_102234562	3300021093	Freshwater Lake	MESMIDERYRLDLIKYHLEGFEQKQGKSVFFCPLCQFSRPKGKYVQKKGGMFWKPQWNAWRFNCAKCLSPTSMYRYLDKVNPELAKRYQRERWHLGTTGWGHDCPNIRDIRNSS
Ga0194123_102333823	3300021093	Freshwater Lake	MESKIDERYRLDLIRYHLEGFEEKNGKSIFYCPLCQNDRSLGKYYQKKGGMFWNSVCNSWRFNCKKCLPMTTMYRYLMLVNPLMGRAYQRERWHSGTTGKGRDCPNPEVLPSVEEQLVHQSVNEGSENNG
Ga0194123_102367931	3300021093	Freshwater Lake	MESLIDQRYRLDLIKYHLEGFEEKQGKSVFFCPLCQFSRPQGKYVQKKGGMFWCAQWNAWRFNCAKCLPMTSMYRYMEKVNPVMARRYQRERWSSGTTGKGRDCPNPVV
Ga0194123_102968462	3300021093	Freshwater Lake	LDLIRYHLGGYEEKQGKAVFFCPLCQFSRPQGKYVQKKGGMFWCAQWNTWRFNCAKCLSMTSMYRYMDKVNPELARRYQRER
Ga0194123_104782681	3300021093	Freshwater Lake	NMESLIDQRYRLDLIRYHLEGFEEKQGKAVFFCPLCQFSRPQGKYVQKKGGMFWCAQWNAWRFNCARCQPMTSMYRFLEKVNPELARRYQRERWNSGTTGRGHDCPLPAPL
Ga0194123_105582431	3300021093	Freshwater Lake	MINLLCECNMESLIDQRYRLDLIRYHLEGFEEKQGKAVFFCPLCQFSRPQGKYVQKKGGMFWCAQWNAWRFNCTKCLPMTSMYRYMEKVNPVMARRYQRERWNSGTTGKGHDCPSPN
Ga0194130_100258384	3300021376	Freshwater Lake	MIDQRYRLELIRYHLDGFEEKKCKAVFFCPLCQFSRPQGRYVQKKGGMFWNPSHNAWHFNCMKCLPATTMYRYLMLVNPVMGRAYQRERWHSGTTGKGEGLSEP
Ga0194130_101247102	3300021376	Freshwater Lake	MESLIDQRYRLDLIRYHLEGFEEKHGKAVFFCPLCQFSRPQGKYVQKKGGMFWCAQWNAWRFNCMKCLPMTSMYRFLEKVNPEMSRKYQRDRWISGNTGRGHDCPSPKDQEFS
Ga0194130_101776492	3300021376	Freshwater Lake	MESLIDQRYRLDLIRYHLDGFEEKQGKAVFFCPLCQFSRPQGKYVQKKGGMFWCAQWNAWRFNCAKCLPMTSMYRYLDKVNPELAKRYQRERWHSGTTGWGHDCPSLQ
Ga0194130_104246091	3300021376	Freshwater Lake	MESIIDQRYRLDLIHYHLEGFEEKQGKAVFFCPLCQFLRPQEKYVQKKGGMFWIPQWNSWRFNCAKCLPMTSMYRYLEKVNPELARRYQLER
Ga0194130_106660901	3300021376	Freshwater Lake	HLEGFEKKQGKAVFFCPLCQISRPQGKYVQKKGGMFWIAQWNAWRFNCMKCLSMTSMYRYLEKINPELARKYQRERWTSGTTGKGHDCPAPYIR
Ga0194117_100909674	3300021424	Freshwater Lake	MESLIDQRYRLDLIRYHLEGFEEKQGKAVFFCPLCQFSRPQGKYVQKKGGMFWCAQWNAWRFNCAKCLPMTSMYRYLDKVNPELAKRYQRERWHSGTTGWGHDCPSLQ
Ga0194117_101473904	3300021424	Freshwater Lake	MESKIDERYRLDLIRYHLEGFEEKNGKSIFYCPLCQNDRSPGKYYQKKGGMFWNSVCNSWRFNCAKCLPMTTMYRYLMLVNPLMGRACQRERWHSGTTGKGRDCPNPEVLPSVEEQLVHQSVNEGSEKNG
Ga0194117_103565612	3300021424	Freshwater Lake	EGFEEKNGKSIFYCPLCQNDRSLGKYYQKKGGMFWNSVCNSWRFNCKKCLPMTTMYRYLMLVNPLMGRAYQRERWHSGTTGKGRDCPNPEVLPSVEEQLVHQSVNEGSENNG
Ga0194117_103648941	3300021424	Freshwater Lake	MESLIDQKYRLDLIRYHFEGYEEKKGKAVFFCPLCQFARPKGKYVQKKGGMFWCAQWNAWRFNCVKCLPMTSMYRYLEKVNPELARRYQRERWISGATGWGHDCPNPNHK
Ga0213866_101199951	3300021425	Seawater	MENIIDQRYRLDLIKYHLDEVEEKSGKTVFFCPLCQFNRPKDKYTQKKGAMFWCEQWNAWRFNCVKCLWQATTMYRYLLLVNPVMAKQYQRDRFHAGRTGKGFDCPNPRGVKP
Ga0214923_100229233	3300023179	Freshwater	MESVIDQRYRLDLINHYLDGYEEKQGKAVFFCPLCQVSRPSGKYVQKKGGIFWCAQWNAWRFNCMKCLPMTSMYRYLGRINPEMARRYQQDRWSSGSTGKGHDCPDPVNKLILLQLSVDSDGPLHN
Ga0334982_0143265_641_1021	3300033981	Freshwater	MESVIDQRYRLDLIQHYFDGYEEKQGKAVFFCPLCQVSRPSGKYVQKKGGIFWCAQWNAWRFNCMKCLPMTSMYRYLGRINPEMARRYQQDRWSSGSTGKVHDCPDPVNKLILLQLSVDSDGPLHN
Ga0335019_0056557_1995_2339	3300034066	Freshwater	MESLIDQRYRLDLIQHHLDGFEKKQGKAVFFCPLCQFSRPQGHYVQKKGGMFWCQQWNGWRFNCMKCLRQATTMYRYLEKVNPEMAQRYQQDRWHSRTTGKGHDCPSPVGLMTG
Ga0335054_0401080_65_445	3300034119	Freshwater	MESLIDQRYRLDLIKYHLDGYEEKQGKSVFFCPLCQFNRPKGKYVQKKGGMFWNPQWNAWRFNCVKCLPMTTMHRYLEKVNPELARRYQRDRWHSGTAGWGHDCGAPQSVVEVSTGSNNRQVRQRP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F085332

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences