Metagenome Family F085308

Basic Information
Family ID	F085308
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	66 residues
Representative Sequence	GRAHPLLVCNPSDMLVPWIGDVAAAPILADMVMAVVERGKDPKAAAKEASDKISRDIIGKAKG
Number of Associated Samples	103
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	92.79 %
% of genes from short scaffolds (< 2000 bps)	87.39 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (97.297 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (19.820 % of family members)
Environment Ontology (ENVO)	Unclassified (38.739 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.649 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.49% β-sheet: 0.00% Coil/Unstructured: 36.51%
Feature Viewer

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Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF00528	BPD_transp_1	32.43
PF13416	SBP_bac_8	0.90
PF02608	Bmp	0.90
PF13483	Lactamase_B_3	0.90
PF01613	Flavin_Reduct	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG1744	Lipoprotein Med, regulator of KinD/Spo0A, PBP1-ABC superfamily, includes NupN	Signal transduction mechanisms [T]	0.90
COG1853	FMN reductase RutF, DIM6/NTAB family	Energy production and conversion [C]	0.90

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.30 %
Unclassified	root	N/A	2.70 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.30 %
Unclassified	root	N/A	2.70 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.30 %
Unclassified	root	N/A	2.70 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.21 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	4.50 %
Unclassified	root	N/A	2.70 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	4.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.60 %
Unclassified	root	N/A	2.70 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	4.50 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.60 %
Unclassified	root	N/A	2.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	4.50 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.60 %
Unclassified	root	N/A	2.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4.50 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.60 %
Unclassified	root	N/A	2.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4.50 %
Unclassified	root	N/A	2.70 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2209111007\|2215176330	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300000550\|F24TB_10713234	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300004114\|Ga0062593_101807426	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300004156\|Ga0062589_100553819	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300004281\|Ga0066397_10104566	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300004643\|Ga0062591_100543105	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300005093\|Ga0062594_102311915	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300005166\|Ga0066674_10136810	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300005180\|Ga0066685_10538044	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300005180\|Ga0066685_10552692	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300005205\|Ga0068999_10001173	All Organisms → cellular organisms → Bacteria	2320	Open in IMG/M
3300005332\|Ga0066388_100326804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	2180	Open in IMG/M
3300005332\|Ga0066388_108814340	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300005340\|Ga0070689_101454007	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300005440\|Ga0070705_100881586	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300005451\|Ga0066681_10325285	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300005518\|Ga0070699_101139110	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300005547\|Ga0070693_100313772	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300005559\|Ga0066700_10956993	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300005574\|Ga0066694_10252024	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300005598\|Ga0066706_10099802	All Organisms → cellular organisms → Bacteria → Proteobacteria	2105	Open in IMG/M
3300005713\|Ga0066905_100069201	All Organisms → cellular organisms → Bacteria	2262	Open in IMG/M
3300006049\|Ga0075417_10527779	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300006844\|Ga0075428_102047518	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300006846\|Ga0075430_100582807	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300006854\|Ga0075425_101620645	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300006871\|Ga0075434_102588797	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300007255\|Ga0099791_10382215	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300009038\|Ga0099829_10129224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1998	Open in IMG/M
3300009038\|Ga0099829_10496067	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300009088\|Ga0099830_11260377	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	614	Open in IMG/M
3300009090\|Ga0099827_10444447	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300009090\|Ga0099827_11682220	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300009092\|Ga0105250_10474689	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300009094\|Ga0111539_10658832	All Organisms → cellular organisms → Bacteria	1219	Open in IMG/M
3300009098\|Ga0105245_10918250	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300009147\|Ga0114129_11060841	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300009147\|Ga0114129_12000953	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300009156\|Ga0111538_11527415	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300009802\|Ga0105073_1046643	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300009804\|Ga0105063_1033952	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300009810\|Ga0105088_1064325	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300009837\|Ga0105058_1174956	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300010046\|Ga0126384_10927475	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300010047\|Ga0126382_10634061	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300010336\|Ga0134071_10594864	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300010362\|Ga0126377_10929651	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300011119\|Ga0105246_10513943	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300011269\|Ga0137392_11338012	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300011270\|Ga0137391_11532934	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300011425\|Ga0137441_1163059	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300011441\|Ga0137452_1071705	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300012203\|Ga0137399_10948259	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300012203\|Ga0137399_10950173	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300012206\|Ga0137380_11567357	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300012231\|Ga0137465_1177688	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300012353\|Ga0137367_10095704	All Organisms → cellular organisms → Bacteria	2190	Open in IMG/M
3300012355\|Ga0137369_10705033	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300012358\|Ga0137368_10604116	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300012361\|Ga0137360_11178305	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	662	Open in IMG/M
3300012363\|Ga0137390_11617318	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300012918\|Ga0137396_10349467	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300012925\|Ga0137419_10288362	All Organisms → cellular organisms → Bacteria	1250	Open in IMG/M
3300012976\|Ga0134076_10001218	All Organisms → cellular organisms → Bacteria	7497	Open in IMG/M
3300014157\|Ga0134078_10402192	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300014318\|Ga0075351_1172301	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300014745\|Ga0157377_11774597	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300014865\|Ga0180078_1098109	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300014885\|Ga0180063_1286337	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300015245\|Ga0137409_10408462	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300015252\|Ga0180075_1068098	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300015264\|Ga0137403_11574122	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300017966\|Ga0187776_10274873	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300017997\|Ga0184610_1191083	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300018075\|Ga0184632_10416268	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300018422\|Ga0190265_12093257	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300019377\|Ga0190264_11091788	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300019886\|Ga0193727_1041141	All Organisms → cellular organisms → Bacteria	1532	Open in IMG/M
3300019998\|Ga0193710_1016802	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300020006\|Ga0193735_1109158	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300021344\|Ga0193719_10218328	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300022694\|Ga0222623_10253905	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300025174\|Ga0209324_10061746	All Organisms → cellular organisms → Bacteria	2578	Open in IMG/M
3300025899\|Ga0207642_10070083	All Organisms → cellular organisms → Bacteria	1665	Open in IMG/M
3300025912\|Ga0207707_11014880	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300025921\|Ga0207652_10966976	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300025930\|Ga0207701_10139257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2154	Open in IMG/M
3300025945\|Ga0207679_12080860	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	516	Open in IMG/M
3300025961\|Ga0207712_12139012	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300025981\|Ga0207640_12197844	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300026377\|Ga0257171_1065792	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300026497\|Ga0257164_1023194	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300026540\|Ga0209376_1319054	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300027511\|Ga0209843_1011523	All Organisms → cellular organisms → Bacteria → Proteobacteria	1852	Open in IMG/M
3300027655\|Ga0209388_1143371	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	676	Open in IMG/M
3300027717\|Ga0209998_10004791	All Organisms → cellular organisms → Bacteria → Proteobacteria	2856	Open in IMG/M
3300027875\|Ga0209283_10101404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1883	Open in IMG/M
3300027880\|Ga0209481_10608670	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300027907\|Ga0207428_10113062	All Organisms → cellular organisms → Bacteria	2088	Open in IMG/M
3300027907\|Ga0207428_10691602	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300028592\|Ga0247822_10661292	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300028715\|Ga0307313_10211155	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	603	Open in IMG/M
3300028814\|Ga0307302_10137891	All Organisms → cellular organisms → Bacteria	1178	Open in IMG/M
3300028884\|Ga0307308_10635148	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10168432	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300031740\|Ga0307468_100020571	All Organisms → cellular organisms → Bacteria	2902	Open in IMG/M
3300032000\|Ga0310903_10048170	All Organisms → cellular organisms → Bacteria → Proteobacteria	1624	Open in IMG/M
3300034257\|Ga0370495_0136997	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.18%
Host-Associated	Host-Associated	19.82%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.17%
Plants	Host-Associated → Plants	19.82%
Aquatic	Environmental → Aquatic	9.01%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.12%
Sediment	Environmental → Aquatic → Sediment	8.11%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.70%
Marine	Environmental → Aquatic → Marine	0.90%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.22%
Loam	Environmental → Terrestrial → Soil → Loam	10.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.11%
Sand	Environmental → Terrestrial → Soil → Sand	5.41%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.60%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.70%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.90%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.22%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.11%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.31%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	5.41%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.60%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.60%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.70%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.80%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.90%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.90%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.21%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	5.41%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	4.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.70%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.80%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.80%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.80%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.90%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.90%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.90%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.90%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.90%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.90%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.90%
Speleothem And Rock Wall Surfaces	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Speleothem And Rock Wall Surfaces	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.90%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2209111007	Cave microbial community (Dry rock wall)	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005205	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D2	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009802	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_50_60	Environmental	Open in IMG/M
3300009804	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40	Environmental	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011425	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT244_2	Environmental	Open in IMG/M
3300011441	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012231	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT828_2	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014318	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014865	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT499_16_10D	Environmental	Open in IMG/M
3300014885	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10D	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015252	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT399_16_10D	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019998	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m1	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025174	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 3	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300027511	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300034257	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
2214259957	2209111007	Speleothem And Rock Wall Surfaces	WVEMGRAHPLLVCNPSDMVVPWIGDVAAAPILADMVMAVVERGKDPKVAAKEASDKISRDIIGKAKG
F24TB_107132341	3300000550	Soil	QVKWVEIGRAHPLLICNPQDMLVPWIGDVAAAPILADMVMAVVERGKDPKAAAKEASDKISRDIIGKAKG*
Ga0062593_1018074262	3300004114	Soil	LLSIFKADFQDSSYMGHPERRRWKSWLDVQVKWVESGRAHPLLVCNPQDMLIPWIGDVAAAPILADMAMAVVERGKDPRAAAKEASDKINRDIIGKAK*
Ga0062589_1005538192	3300004156	Soil	RWKPWLDAQLKWVEIGRAHPLLVSNPSDMLIPWIGDVAASPILADMVMAVVERGKDPKAAAKEASDKIVRDIIGKAK*
Ga0066397_101045661	3300004281	Tropical Forest Soil	WKPWLDAQLKWVEIGRAHPLLVCNPQDMLVPWIGDVAAAPILADMTMAVVERGKDPRAAAKEASDKISRDIIGKTKG*
Ga0062591_1005431052	3300004643	Soil	HPLLVCNPQDMLIPWIGDVAAAPILADMAMAVVERGKDPRAAAKEASDKINRDIIGKAK*
Ga0062594_1023119152	3300005093	Soil	QVKWVESGRAHPLLVCNPQDMLIPWIGDVAAAPILADMAMAVVERGKDPRAAAKEASDKINRDIIGKAK*
Ga0066674_101368102	3300005166	Soil	VEIGRAHPLLICNPQDMLVPWIGDVAAAPILADMVMAVVERGRDPRAAAKEAGDKISRDIIGKAKG*
Ga0066685_105380442	3300005180	Soil	PSDMLIPWIGDVAASPILADMVMAVVERGKDPKAAAKEASDKIVRDIIGKTK*
Ga0066685_105526921	3300005180	Soil	DAQLKWVEIGRAHPLLVCNPQDMLIPWIGDVAAAPILADMVMAVVERGRDPRAAAKEATDKISRDIIGKPKG*
Ga0068999_100011734	3300005205	Natural And Restored Wetlands	LKWVEIGRAHPLLVCNPSDMLVPWIGDVAAAPILADMVMSVVERGRDPKVAAKEASDKISRDIIGKAKG*
Ga0066388_1003268043	3300005332	Tropical Forest Soil	QDMLVPWIGDVAAAPILADMTMAVVEKGKDPRVAAKEASDKISRDIIGKAKG*
Ga0066388_1088143401	3300005332	Tropical Forest Soil	DRLVPWIGDVAAAPILADMVMAVVERGKDPRAAAKEASDKIGRDIIGKVKG*
Ga0070689_1014540072	3300005340	Switchgrass Rhizosphere	RWKPWLDAQVKWVDSGRAHPLLICNPQDMLVPWIGDVAAAPILADMVMAVVERGKDPKAAAKEASDKISRDIIGKAKG*
Ga0070705_1008815861	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	DMLVPWIGDVAAAPILADMVRAVAERGKDPKTAAKEASDKISRDIIGKAKG*
Ga0066681_103252851	3300005451	Soil	WLDAQVKWVEMGRAHPLLVCNPQDMLIPWIGDVAAAPILADMVMAVVERGRDPRAAAKEAGDKISRDIIGKAKG*
Ga0070699_1011391101	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	AQLKWVEMGRAHPLLVCNPEDMLVPWIGDVAAAPILADMVMAVVEKGRDPKVAAKEASDKIVRDIIGKAK*
Ga0070693_1003137722	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	PERRRWKSWLDVQVKWVESGRAHPLLVCNPQDMLIPWIGDVAAAPILADMAMAVVERGKDPRAAAKEASDKINRDIIGKAK*
Ga0066700_109569931	3300005559	Soil	EDVLIPWIGDVAASPILADMVMAVVERGRDPKVAAKEASDKIVRDIIGKAK*
Ga0066694_102520241	3300005574	Soil	RAHPLLVCNPQDMLVPWIGDVAAAPILADMVMAVVERGKDPKVAAKEASDKISRDIIGKTKS*
Ga0066706_100998024	3300005598	Soil	AHPLLICNPQDMLVPWIGDVAAAPILADMVMAVVERGRDPRAAAKEAGDKISRDIIGKAKG*
Ga0066905_1000692011	3300005713	Tropical Forest Soil	DAQLKWVEIGRAHPLLVCNPQDMLVPWIGDVAAAPILADMTMAVVEKGKDPRVAAKEASDKISRDIIGKAKG*
Ga0075417_105277792	3300006049	Populus Rhizosphere	GRAHPLLVCNPSDMLVPWIGDVAAAPILADMVMAVVERGKDPKAAAKEASDKISRDIIGKAKG*
Ga0075428_1020475181	3300006844	Populus Rhizosphere	SNPSDMLIPWIGDVAASPILADMVMAVVERGKDPKAAAKEASDKIVRDIIGKAK*
Ga0075430_1005828072	3300006846	Populus Rhizosphere	SNPSDMLIPWIGDVAASPILADMVMAVVERGKDPKAAAKEASEKIVRDIIGKAK*
Ga0075425_1016206451	3300006854	Populus Rhizosphere	PQDMLVPWIGDVAAAPILADMTMAVVERGKDPRVAAKEASDKISRDIIGKAKG*
Ga0075434_1025887972	3300006871	Populus Rhizosphere	PWLDAQLKWVEIQRAHPLLVSNPSDMLIPWIGDVAASPILADMVMAVVERGRDPKAAAKEASDKIVRDIIGKVK*
Ga0099791_103822151	3300007255	Vadose Zone Soil	KWVEIGRAHPLLVCNPQDMLVPWIGDVAAAPILADMVMAVVERGRDPKVAAKEASDKISRDIIGKTKS*
Ga0099829_101292241	3300009038	Vadose Zone Soil	RAHPLLVCNPQDMLVPWIGDVAAAPILADMVMAVVERGKDPKVAAKEASDKISRDIIGKAKS*
Ga0099829_104960671	3300009038	Vadose Zone Soil	IGRAHPLLVCNPQDMLVPWIGDVAAAPILADMVMAVVERGRDPKVAAKEASDKISRDIIGKTKS*
Ga0099830_112603772	3300009088	Vadose Zone Soil	FKEDFQDPAYMGHPERKRWKPWLDAQLKWVEIGRAHPLLVCNPQDMLVPWIGDVAAAPILADMVMAGVERGPDPKVAAKEASDKISRDIIGKAKS*
Ga0099827_104444472	3300009090	Vadose Zone Soil	EIGRAHPLLVCNPQDMLVPWIGDVAAAPILADMVMAVVERGKDPKVAAKEASDKISRDIIGKTKS*
Ga0099827_116822201	3300009090	Vadose Zone Soil	WLDAQLKWVEIGRAHPLLVCNPQDMLVPWIGDVAAAPILADMVMAVVERGRDPKVAAKEASDKISRDIIGKTKS*
Ga0105250_104746892	3300009092	Switchgrass Rhizosphere	HLNSIFKADFQDSSYMGHPERRRWKSWLDVQVKWVESGRAHPLLVCNPQDMLIPWIGDVAAAPILADMAMAVVERGKDPRAAAKEAGDKITRDIIAKG*
Ga0111539_106588322	3300009094	Populus Rhizosphere	WKPWLDAQLKGVEIGRAHPLLVCNPQDMVIPWIGDVAATPILADMVMAVVEKGKDPKTAAKEASDKILRDIIDKTK*
Ga0105245_109182501	3300009098	Miscanthus Rhizosphere	VCNPQDMLIPWIGDVAAAPILADMAMAVVERGKDPRAAAKEASDKINRDIIGKAK*
Ga0114129_110608412	3300009147	Populus Rhizosphere	DMLVPWIGDVAAAPILADMVMAVVEKGKDPKAAAKEASDKIVRDIIGKAK*
Ga0114129_120009532	3300009147	Populus Rhizosphere	VCNPQDMLVPWIGDVAAAPILADMVMAVVEKGKDPKAAAKEASDKIVRDIIDKTK*
Ga0111538_115274152	3300009156	Populus Rhizosphere	LDAQLKWVEIGRAHPLLVCNPQDMVIPWIGDVAATPILADMVMAVVERGKDPKAAAKEASDKIVRDIIDKTK*
Ga0105073_10466431	3300009802	Groundwater Sand	PLLVCNPSDMLVPWIGDVAAAPILADMVMAVVERGKDPKAAAKEASDKISRDIIGKAKG*
Ga0105063_10339521	3300009804	Groundwater Sand	VEMGRAHPLLVCNPSDMLVPWIGDVAAAPILADMVMAVVERGKDPKAAAKEASDKISRDIIGKAKG*
Ga0105088_10643251	3300009810	Groundwater Sand	RWKPWLDAQLKWVEIGRAHPLLVCNPQDMLVPWIGDVAAAPILADMVMAVVERGKDPKVAAKEASDKITRDIIGKAK*
Ga0105058_11749561	3300009837	Groundwater Sand	VKWVESGRAHPLLVCNPQDRLIPWIGDVAAAPILADMASSVVERGKDPRAAAKEANEKIQRDIIAKNK*
Ga0126384_109274752	3300010046	Tropical Forest Soil	DMLVPWIGDVAAAPILADMTMAVVEKGKDPRVAAKEASDKIARDIIGKTKG*
Ga0126382_106340612	3300010047	Tropical Forest Soil	HPLLVCNPQDMLVPWIGDVAAAPILADMVMAVVERGRDPKAAAKEANDKISRDILGKAKS
Ga0134071_105948641	3300010336	Grasslands Soil	WLDAQVKWVEIGRAHPLLICNPQDRLVPWIGDVAAAPILADMVMAVVERGKDPKVAAKEASDKISRDIIGKTKS*
Ga0126377_109296511	3300010362	Tropical Forest Soil	AQVKWVESGRAHPLLVCNAQDRLIPWIGDVAAAPILADMVTAVVERGKDPRAAAKEASEKIQRDIIAKAK*
Ga0105246_105139432	3300011119	Miscanthus Rhizosphere	LSIFKSDFQDSTYMGHPERRRWKSWLDVQVKWVESGRAHPLLVCNPQDMLIPWIGDVAAAPILADMAMAVVERGKDPRAAAKEASDKINRDIIGKAK*
Ga0137392_113380122	3300011269	Vadose Zone Soil	CNPQDMLVPWIGDVAAAPILADMVMAVVERGKDPKVAAKEASDKISRDIIGKAKS*
Ga0137391_115329342	3300011270	Vadose Zone Soil	LLVCNPQDMLVPWIGDVAAAPILADMTMAVVERGKDPRVAAKEASDKISRDIIGKAKG*
Ga0137441_11630591	3300011425	Soil	NPSDMLVPWIGDVAAAPILADMVMAVVERGRDPKVAAKEASDKISRDIIGKAKG*
Ga0137452_10717051	3300011441	Soil	LIPWIGDVAAAPILADMAMAVVERGKDPRAAAKEASDKINRDIIGKAK*
Ga0137399_109482591	3300012203	Vadose Zone Soil	WLDAQLKWVEMGRAHPLLVCNPSDMLVPWIGDVAAAPILADMVMAVVERGKDPKAAAKEASDKISRDIIGKAKG*
Ga0137399_109501732	3300012203	Vadose Zone Soil	VEIGRAHPLLICNPQDMLIPWIGDVAAAPILADMVMAVVERGRDPRVAAKEASDKISRDIIGKAKG*
Ga0137380_115673572	3300012206	Vadose Zone Soil	WVEMGRAHPLLVCNPKDMLVPWIGDVAAAPILADMVMAVVERGKDPRAAAKEASDKISRDIIGKAKG*
Ga0137465_11776881	3300012231	Soil	KLIPWIGDVAAAPILADMAMAVVERGKDPRAAAKEASDKINRDIIGKAK*
Ga0137367_100957044	3300012353	Vadose Zone Soil	QDMLVPWIGDVAAAPILADMTMAVVERGKDPRVAAKEASDKISRDIIGKAKG*
Ga0137369_107050331	3300012355	Vadose Zone Soil	QDMLIPWIGDVAAAPILADMVMAVVERGKDPKAAAKEASDKISRDIIGKAKG*
Ga0137368_106041162	3300012358	Vadose Zone Soil	QLKWVEIGRAHPLLVCNPQDMLVPWIGDVAAAPILADMTMAVVERGKDPRVAAKEASDKISRDIIGKAKG*
Ga0137360_111783052	3300012361	Vadose Zone Soil	DFADPAYMNHPERKRWKPWLDAQLKWVEIGRAHPLLVSNPEDVLIPWIGDVAASPILADMVMAVVERGRDPKVAAKEASDKIVRDIIGKAK*
Ga0137390_116173182	3300012363	Vadose Zone Soil	RWKPWLYAQLKWVETGRAHPLLVCNPQDMLVPWLGDVAAAPLLADMVMAVVERGKDPKVAAKEASDKISRDIIGKAKS*
Ga0137396_103494671	3300012918	Vadose Zone Soil	LLVCNPQDMLVPWIGDVAAAPILADMVMAVVERGKDPKVAAKEASDKISRDIIGKAKS*
Ga0137419_102883622	3300012925	Vadose Zone Soil	VEIGRAHPLLVCNPSDMLVPWIGDVAAAPILADMVMAVVERGKDPKAAAKEASDKISRDIIGKAKG*
Ga0134076_100012181	3300012976	Grasslands Soil	WKPWLDAQLKWVEIGRAHPLLVSNPSDMLIPWIGDVAASPILADMVMAVVERGRDPKAAAKEASDKIVRDVIGKAR*
Ga0134078_104021921	3300014157	Grasslands Soil	HPLLVSNPEDVLIPWIGDVAASPILADMVMAVVERGRDPKVAAKEASDKIVRDIIGKTK*
Ga0075351_11723011	3300014318	Natural And Restored Wetlands	LDAQLKWVEMGRAHPLLVCNPQDMNIPWIGDVAAAPVLADMVMAVVEKGKDPKAAAKEASDKIVRDIIDKSK*
Ga0157377_117745972	3300014745	Miscanthus Rhizosphere	LLICNPQDMLVPWIGDVAAAPILADMVMAVVERGKDPKTAAKEASDKISRDIIGKAKG*
Ga0180078_10981092	3300014865	Soil	DKLIPWIGDVAAAPILADMAMAVVERGKDPRAAAKEASDKINRDIIGKAK*
Ga0180063_12863372	3300014885	Soil	ADFQDAGYMGFPERKRWKPWLDAQVKWVESGRAHPLMVCNAQDRLIPWIGDVAAAPILADMATAVVERGKDPRAAAKEANEKIQRDIIAKSK*
Ga0137409_104084622	3300015245	Vadose Zone Soil	PEDVLIPWIGDVAASPILADMVMAVVERGRDPKVAAKEASDKIVRDIIGKAK*
Ga0180075_10680981	3300015252	Soil	HPLLVCNPSDMLVPWIGDVAAAPILADMVMAVVERGKDPKAAAKEASDKISRDIIGKAKG
Ga0137403_115741221	3300015264	Vadose Zone Soil	YMNHPERKRWKAWLDAQLKWVEIGRAHPLLVCNPQDMTIPWIGDVAATPILADMVMAVVEKGRDPKAAAKEASDKIVRDIIAKAK*
Ga0187775_105374022	3300017939	Tropical Peatland	PKDRLIPWLGDVAGAPILTDLVMAVVEKGQDPKKAAQDANLRINRDIIEKWKKG
Ga0187776_102748732	3300017966	Tropical Peatland	SYPLLMCDPKDRMVPWIGDVATSPIMADMIMAVVTKGEDPKKAAKEANMRISRDIIDRWKKA
Ga0184610_11910832	3300017997	Groundwater Sediment	RAHPLLVCNPSDMLVPWIGDVAAAPILADMVMAVVERGKDPKAAAKEASDKISRDIIGKAKG
Ga0184632_104162681	3300018075	Groundwater Sediment	VKWVEIGRAHPLLICNPQDMLIPWIGDVAAAPILADMVMAVVERGKDPKAAAKEASDKISRDIIGKAKG
Ga0190265_120932572	3300018422	Soil	HPLLVCNPQDMTIPWIGDVAAAPILADMVMGVVERGKDPKVAAKEASDKIVRDIIGKAK
Ga0190264_110917882	3300019377	Soil	LDAQVKWVESGRAHPLLVCNPQDKLIPWIGDVAAAPILADMAMAVVERGKDPRAAAKEATDKINRDIIGKAK
Ga0193727_10411413	3300019886	Soil	DMLIPWIGDVAAAPILADMVMAVVERGKDPRAAAKEASDKITRDIIGKAK
Ga0193710_10168022	3300019998	Soil	LKWVEIGRAHPLLVCNPSDMLVPWIGDVAAAPILADMVMAVVERGKDPKAAAKEASDKISRDIIGKAKG
Ga0193735_11091581	3300020006	Soil	VCNPQDMLIPWIGDVAAAPILADMAMAVVERGKDPRAAAKEASDKINRDIIGKAK
Ga0193719_102183281	3300021344	Soil	LVCNPQDMLVPWIGDVAAAPILADMVMAVVERGKDPKVAAKEATDKISRDIIGKAKS
Ga0222623_102539051	3300022694	Groundwater Sediment	QLKWVEMGRAHPLLVCNPSDMLVPWIGDVAAAPILADMVMAVVERGKDPKAAAKEASDKISRDIIGKAKG
Ga0209324_100617461	3300025174	Soil	LVPWLGDVAAAPILADMVMAVVERGRDPRAAAKEANEKIVRDIIGKAKKS
Ga0207642_100700833	3300025899	Miscanthus Rhizosphere	DFQDSSYMGHPERRRWKWWLDLQVKWVESGRAHPLLVCNPQDMLIPWIGDVAAAPILADMAMAVVERGKDPRAAAKEASDKINRDIIGKAK
Ga0207707_110148801	3300025912	Corn Rhizosphere	LLICNPQDMLVPWIGDVAAAPILADMVMAVVERGKDPKAAAKEASDKISRDIIGKAKG
Ga0207652_109669762	3300025921	Corn Rhizosphere	QVKWVESGRAHPLLVCNPQDMLIPWIGDVAAAPILADMAMAVVERGKDPRAAAKEASDKINRDIIGKAK
Ga0207701_101392571	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	RWKTWLDAQVKWVDSGRAHPLLICNPQDMLVPWIGDVAAAPILADMVMAVVERGKDPKAAAKEASDKISRDIIGKAKG
Ga0207679_120808601	3300025945	Corn Rhizosphere	KDAAYMDHPERKRWKPWLDAQVKWVDMGRAHPLLVCNPNDRLIPWIGDVAAAPILADMVMAVVERGKDPRAAAKEASDKISRDIIGKAKG
Ga0207712_115473362	3300025961	Switchgrass Rhizosphere	LIPWIGDVAAAPILADMVMAVVEKGKDPKAAAKEASDKIVRDIIGKAK
Ga0207712_121390122	3300025961	Switchgrass Rhizosphere	IGRAHPLLVCNPSDMLVPWIGDVAAAPILADMVMAVVERGKDPKAAAKEASDKISRDIIGKAKG
Ga0207640_121978442	3300025981	Corn Rhizosphere	HPLLVCNPQDMLIPWIGDVAAAPILADMAMAVVERGKDPRAAAKEASDKINRDIIGKAK
Ga0207708_116914191	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	LVPWIGDVAAAPILADMVMAVVEKGKDPKAAAKEASDKIVRDIIGKAK
Ga0257171_10657921	3300026377	Soil	GRAHPLLVCNPQDMLVPWIGDVAAAPILADMTMAVVERGKDPRAAAKEASDKISRDIIGKAKG
Ga0257164_10231942	3300026497	Soil	VEIGRAHPLLVCNPQDMLVPWIGDVAAAPILADMVMAVVERGKDPKVAAKEASDKISRDIIGKAKS
Ga0209376_13190541	3300026540	Soil	NPQDMLIPWIGDVAAAPILADMVMAVVERGRDPRAAAKEATDKISRDIIGKPKG
Ga0209843_10115231	3300027511	Groundwater Sand	VESGRAHPLLVCNPQDRLIPWIGDVAAAPILADMASSVVERGKDPRAAAKEANEKIQRDIIAKNK
Ga0209388_11433711	3300027655	Vadose Zone Soil	IFKEDFQDPAYMGHPERKRWKPWLDAQLKWVEIGRAHPLLVCNPQDMLVPWIGDVAAAPILADMTMAVVERGKDPRVAAKEASDKISRDIIGKAKG
Ga0209998_100047911	3300027717	Arabidopsis Thaliana Rhizosphere	LLVSNPSDMLVPWIGDVAASPILADMVMAVVERGKDPKAAAKEASDKIVRDIIGKAK
Ga0209283_101014041	3300027875	Vadose Zone Soil	DAQLKWVEIGRAHPLLVCNPQDMLVPWIGDVAAAPILADMVMAVVERGRDPKVAAKEASDKISRDIIGKTKS
Ga0209481_106086701	3300027880	Populus Rhizosphere	KWVEIGRAHPLLICNPQDMLVPWIGDVAAAPILADMVMAVVERGKDPKAAAKEASDKISRDIIGKAKG
Ga0207428_101130621	3300027907	Populus Rhizosphere	LDAQLKWVEMGRAHPLLVCNPDDMLIPWIGDVAAAPILADMVMAVVEKGKDPKAAAKEASDKIVRDIIGKAK
Ga0207428_106916022	3300027907	Populus Rhizosphere	LKWVEIGRAHPLLVCNPQDMVIPWIGDVAATPILADMVMAVVEKGKDPKTAAKEASDKILRDIIDKTK
Ga0247822_106612922	3300028592	Soil	CNPDDMLVPWIGDVAAAPILADMVMAVVEKGKDPKAAAKEASDKIVRDIIGKAK
Ga0307313_102111551	3300028715	Soil	QDSTYMGHPERKRWKSWLDVQVKWVESGRAHPLLVCNPQDMLIPWIGDVAAAPILADMAMAVVERGKDPRAAAKEASDKINRDIIGKAK
Ga0307302_101378911	3300028814	Soil	HPLLICNPQDMLVPWIGDVAAAPILADMVMAVVERGKDPKAAAKEASDKISRDIIGKAKG
Ga0307308_106351481	3300028884	Soil	RAHPLLICNPQDMLVPWIGDVAAAPILADMVMAVVERGKDPKAAAKEASDKISRDIIGKAKG
(restricted) Ga0255310_101684321	3300031197	Sandy Soil	VCNPQDMLVPWIGDVAAAPILADMVMAVVERGRDPKVAAKEASDKISRDIIGKTKG
Ga0307468_1000205712	3300031740	Hardwood Forest Soil	MGRAHPLLVCNPSDMLVPWIGDVAAAPILADMVMAVVERGKDPKAAAKEASDKISRDIIGKAKG
Ga0310903_100481701	3300032000	Soil	PWLDAQLKWVEMGRAHPLLVCNPDDMLIPWIGDVAAAPILADMVMAVVEKGKDPKAAAKEASDKIVRDIIGKAK
Ga0370495_0136997_26_220	3300034257	Untreated Peat Soil	MGRAHPLLVCNPSDMLVPWIGDVAAAPILADMVMAVVERGRDPKVAAKEASDKISRDIIGKAKG

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters