Metagenome Family F085169

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085169
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	86 residues
Representative Sequence	MTNIIDQYGIINQQINELEIIKSKLKAELIARGVGEYQGESFFAEVQEYDRENISAPLVRKLSNAEFVRQVTTIQHIKAVVVKPLEA
Number of Associated Samples	87
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	85.71 %
% of genes near scaffold ends (potentially truncated)	22.52 %
% of genes from short scaffolds (< 2000 bps)	73.87 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Predicted Viral (35.135 % of family members)
NCBI Taxonomy ID	10239 (predicted)
Taxonomy	All Organisms → Viruses → Predicted Viral

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater (36.036 % of family members)
Environment Ontology (ENVO)	Unclassified (70.270 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (77.477 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.65% β-sheet: 26.09% Coil/Unstructured: 38.26%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF04542	Sigma70_r2	22.52
PF00140	Sigma70_r1_2	5.41
PF08707	PriCT_2	2.70
PF00535	Glycos_transf_2	1.80
PF10544	T5orf172	1.80
PF03237	Terminase_6N	0.90
PF00476	DNA_pol_A	0.90
PF04539	Sigma70_r3	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	28.83
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	23.42
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	22.52
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	22.52
COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	Replication, recombination and repair [L]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.37 %
Unclassified	root	N/A	30.63 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	68.47 %
Unclassified	root	N/A	30.63 %
cellular organisms	root	All Organisms → cellular organisms	0.90 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	35.14 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	33.33 %
Unclassified	root	N/A	30.63 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	35.14 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	33.33 %
Unclassified	root	N/A	30.63 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	35.14 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	33.33 %
Unclassified	root	N/A	30.63 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	35.14 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	33.33 %
Unclassified	root	N/A	30.63 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	35.14 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	33.33 %
Unclassified	root	N/A	30.63 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	35.14 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	33.33 %
Unclassified	root	N/A	30.63 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001851\|RCM31_10030295	Not Available	636	Open in IMG/M
3300002091\|JGI24028J26656_1005888	All Organisms → Viruses → Predicted Viral	1804	Open in IMG/M
3300002092\|JGI24218J26658_1020956	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	885	Open in IMG/M
3300002092\|JGI24218J26658_1043271	Not Available	513	Open in IMG/M
3300002933\|G310J44882_10000406	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	21403	Open in IMG/M
3300002933\|G310J44882_10027347	All Organisms → Viruses → Predicted Viral	1399	Open in IMG/M
3300002933\|G310J44882_10063435	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	804	Open in IMG/M
3300003375\|JGI26470J50227_1000378	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	18701	Open in IMG/M
3300003375\|JGI26470J50227_1012092	All Organisms → Viruses → Predicted Viral	2108	Open in IMG/M
3300003375\|JGI26470J50227_1021682	All Organisms → Viruses → Predicted Viral	1397	Open in IMG/M
3300003783\|Ga0007850_1006454	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1005	Open in IMG/M
3300003796\|Ga0007865_1019245	Not Available	639	Open in IMG/M
3300003798\|Ga0007842_1014371	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	505	Open in IMG/M
3300003804\|Ga0007817_1000235	All Organisms → Viruses → Predicted Viral	4794	Open in IMG/M
3300003804\|Ga0007817_1002673	All Organisms → Viruses → Predicted Viral	1398	Open in IMG/M
3300003809\|Ga0007869_1011483	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	853	Open in IMG/M
3300003814\|Ga0007877_1035494	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	522	Open in IMG/M
3300004481\|Ga0069718_15061162	All Organisms → Viruses → Predicted Viral	1016	Open in IMG/M
3300004481\|Ga0069718_15134191	Not Available	500	Open in IMG/M
3300004771\|Ga0007797_1170397	Not Available	552	Open in IMG/M
3300004774\|Ga0007794_10035342	All Organisms → Viruses → Predicted Viral	1491	Open in IMG/M
3300004774\|Ga0007794_10042810	All Organisms → Viruses → Predicted Viral	1351	Open in IMG/M
3300004774\|Ga0007794_10144195	Not Available	711	Open in IMG/M
3300004774\|Ga0007794_10194484	Not Available	604	Open in IMG/M
3300004804\|Ga0007796_10034796	All Organisms → cellular organisms → Bacteria	1726	Open in IMG/M
3300004807\|Ga0007809_10245883	Not Available	508	Open in IMG/M
3300006071\|Ga0007876_1009151	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2873	Open in IMG/M
3300006072\|Ga0007881_1099311	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	728	Open in IMG/M
3300006072\|Ga0007881_1167342	Not Available	533	Open in IMG/M
3300006100\|Ga0007806_1008225	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2545	Open in IMG/M
3300006115\|Ga0007816_1081376	Not Available	717	Open in IMG/M
3300006117\|Ga0007818_1017086	All Organisms → Viruses → Predicted Viral	1461	Open in IMG/M
3300006119\|Ga0007866_1014891	All Organisms → Viruses → Predicted Viral	1653	Open in IMG/M
3300006119\|Ga0007866_1061324	Not Available	705	Open in IMG/M
3300006127\|Ga0007805_1045900	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	971	Open in IMG/M
3300007538\|Ga0099851_1064613	All Organisms → Viruses → Predicted Viral	1424	Open in IMG/M
3300008113\|Ga0114346_1059104	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1877	Open in IMG/M
3300009068\|Ga0114973_10157033	All Organisms → Viruses → Predicted Viral	1261	Open in IMG/M
3300009081\|Ga0105098_10185049	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	954	Open in IMG/M
3300009081\|Ga0105098_10237572	Not Available	855	Open in IMG/M
3300009082\|Ga0105099_10102850	All Organisms → Viruses → Predicted Viral	1570	Open in IMG/M
3300009085\|Ga0105103_10520948	Not Available	669	Open in IMG/M
3300009159\|Ga0114978_10487931	Not Available	725	Open in IMG/M
3300009180\|Ga0114979_10474078	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	725	Open in IMG/M
3300009182\|Ga0114959_10025130	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3710	Open in IMG/M
3300009183\|Ga0114974_10102655	All Organisms → Viruses → Predicted Viral	1839	Open in IMG/M
3300010157\|Ga0114964_10221396	Not Available	906	Open in IMG/M
3300010158\|Ga0114960_10096328	All Organisms → Viruses → Predicted Viral	1655	Open in IMG/M
3300010316\|Ga0136655_1156516	Not Available	680	Open in IMG/M
3300010368\|Ga0129324_10358707	Not Available	566	Open in IMG/M
3300010885\|Ga0133913_10946031	All Organisms → Viruses → Predicted Viral	2233	Open in IMG/M
3300011184\|Ga0136709_1001419	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4144	Open in IMG/M
3300011918\|Ga0120090_110240	All Organisms → Viruses → Predicted Viral	1002	Open in IMG/M
3300013093\|Ga0164296_1055032	All Organisms → Viruses → Predicted Viral	1878	Open in IMG/M
3300013286\|Ga0136641_1019096	All Organisms → Viruses → Predicted Viral	2141	Open in IMG/M
3300013286\|Ga0136641_1031381	All Organisms → Viruses → Predicted Viral	1598	Open in IMG/M
3300017754\|Ga0181344_1138455	Not Available	697	Open in IMG/M
3300020158\|Ga0194038_1101040	Not Available	851	Open in IMG/M
3300020163\|Ga0194039_1298198	Not Available	523	Open in IMG/M
3300020205\|Ga0211731_10540041	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	10701	Open in IMG/M
3300020716\|Ga0214207_1022469	Not Available	750	Open in IMG/M
3300020716\|Ga0214207_1023207	Not Available	734	Open in IMG/M
3300020726\|Ga0214220_1001647	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5339	Open in IMG/M
3300020731\|Ga0214170_1040015	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	717	Open in IMG/M
3300020735\|Ga0214219_1007879	All Organisms → Viruses → Predicted Viral	2286	Open in IMG/M
3300021079\|Ga0194055_10103662	All Organisms → Viruses → Predicted Viral	1282	Open in IMG/M
3300021115\|Ga0214174_119103	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	550	Open in IMG/M
3300021131\|Ga0214206_1004976	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2302	Open in IMG/M
3300021139\|Ga0214166_1069011	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	734	Open in IMG/M
3300021354\|Ga0194047_10035539	All Organisms → Viruses → Predicted Viral	2342	Open in IMG/M
3300022063\|Ga0212029_1036721	Not Available	696	Open in IMG/M
3300022200\|Ga0196901_1071950	All Organisms → Viruses → Predicted Viral	1249	Open in IMG/M
3300022591\|Ga0236341_1004115	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6611	Open in IMG/M
3300022591\|Ga0236341_1007407	All Organisms → Viruses → Predicted Viral	4267	Open in IMG/M
3300022594\|Ga0236340_1032438	All Organisms → Viruses → Predicted Viral	1273	Open in IMG/M
3300023311\|Ga0256681_11234692	Not Available	523	Open in IMG/M
3300025075\|Ga0209615_101244	All Organisms → Viruses → Predicted Viral	1819	Open in IMG/M
3300025091\|Ga0209616_1001317	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5398	Open in IMG/M
3300025353\|Ga0208255_117253	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	646	Open in IMG/M
3300025358\|Ga0208504_1000534	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9209	Open in IMG/M
3300025372\|Ga0207957_1013271	Not Available	1087	Open in IMG/M
3300025379\|Ga0208738_1041082	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	681	Open in IMG/M
3300025381\|Ga0208871_1001066	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7231	Open in IMG/M
3300025381\|Ga0208871_1006564	All Organisms → Viruses → Predicted Viral	2111	Open in IMG/M
3300025381\|Ga0208871_1011790	All Organisms → Viruses → Predicted Viral	1432	Open in IMG/M
3300025389\|Ga0208257_1017325	All Organisms → Viruses → Predicted Viral	1134	Open in IMG/M
3300025429\|Ga0208500_1031034	Not Available	659	Open in IMG/M
3300025450\|Ga0208744_1025610	Not Available	1238	Open in IMG/M
3300025595\|Ga0208248_1036185	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1143	Open in IMG/M
3300025595\|Ga0208248_1036453	All Organisms → Viruses → Predicted Viral	1138	Open in IMG/M
3300025595\|Ga0208248_1108324	Not Available	617	Open in IMG/M
3300025598\|Ga0208379_1008614	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3164	Open in IMG/M
3300025606\|Ga0207954_1062006	Not Available	988	Open in IMG/M
3300025616\|Ga0208613_1016491	All Organisms → Viruses → Predicted Viral	1862	Open in IMG/M
3300025723\|Ga0208741_10000540	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	17431	Open in IMG/M
3300027708\|Ga0209188_1060183	All Organisms → Viruses → Predicted Viral	1647	Open in IMG/M
3300027792\|Ga0209287_10266988	Not Available	655	Open in IMG/M
3300027896\|Ga0209777_10210904	All Organisms → Viruses → Predicted Viral	1554	Open in IMG/M
3300027896\|Ga0209777_11120806	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	530	Open in IMG/M
(restricted) 3300028569\|Ga0247843_1001024	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	61329	Open in IMG/M
3300031759\|Ga0316219_1001575	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	23597	Open in IMG/M
3300031759\|Ga0316219_1030022	All Organisms → Viruses → Predicted Viral	2421	Open in IMG/M
3300031759\|Ga0316219_1343509	Not Available	504	Open in IMG/M
3300031813\|Ga0316217_10011932	Not Available	7254	Open in IMG/M
3300031813\|Ga0316217_10050412	All Organisms → Viruses → Predicted Viral	2225	Open in IMG/M
3300031884\|Ga0316220_1192422	Not Available	711	Open in IMG/M
3300032093\|Ga0315902_11225421	Not Available	537	Open in IMG/M
3300032117\|Ga0316218_1047457	All Organisms → Viruses → Predicted Viral	1859	Open in IMG/M
3300032605\|Ga0316232_1118475	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1158	Open in IMG/M
3300032665\|Ga0316221_1019719	All Organisms → Viruses → Predicted Viral	3311	Open in IMG/M
3300034104\|Ga0335031_0234922	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1223	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.10%
Terrestrial	Environmental → Terrestrial	0.90%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	94.59%
Marine	Environmental → Aquatic → Marine	4.50%
Geologic	Environmental → Terrestrial → Geologic	0.90%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	62.16%
Lake	Environmental → Aquatic → Freshwater → Lake	21.62%
Sediment	Environmental → Aquatic → Freshwater → Sediment	6.31%
Coastal	Environmental → Aquatic → Marine → Coastal	4.50%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	3.60%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.90%
Mine	Environmental → Terrestrial → Geologic → Mine	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	39.64%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	21.62%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	12.61%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	6.31%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	5.41%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	4.50%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	4.50%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	3.60%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.90%
Unclassified	Environmental → Terrestrial → Geologic → Mine → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	36.04%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	12.61%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	8.11%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	6.31%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	5.41%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	4.50%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	3.60%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	2.70%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater	2.70%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.70%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	2.70%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	2.70%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	1.80%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.80%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.80%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	0.90%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	0.90%
Marine Plankton	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton	0.90%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.90%
Mine Pit Pond	Environmental → Terrestrial → Geologic → Mine → Unclassified → Mine Pit Pond	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001851	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM31, ROCA_DNA206_0.2um_MCP-S_C_3b	Environmental	Open in IMG/M
3300002091	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-F8 metagenome	Environmental	Open in IMG/M
3300002092	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B6 metagenome	Environmental	Open in IMG/M
3300002933	Combined Assembly of freshwater hypolimnion microbial communities from Trout Bog Lake, Wisconsin, USA	Environmental	Open in IMG/M
3300003375	Freshwater actinobacteria microbial communities from Trout Bog Lake, Wisconsin, USA - enrichment TB-E6	Environmental	Open in IMG/M
3300003783	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH05Oct08	Environmental	Open in IMG/M
3300003796	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jul09	Environmental	Open in IMG/M
3300003798	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Sep07	Environmental	Open in IMG/M
3300003804	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29May09	Environmental	Open in IMG/M
3300003809	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH03Jun09	Environmental	Open in IMG/M
3300003814	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Jul09	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300004771	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA2.5M	Environmental	Open in IMG/M
3300004774	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA5M	Environmental	Open in IMG/M
3300004804	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA0M	Environmental	Open in IMG/M
3300004807	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07	Environmental	Open in IMG/M
3300006071	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH24Aug09	Environmental	Open in IMG/M
3300006072	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09	Environmental	Open in IMG/M
3300006100	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Aug09	Environmental	Open in IMG/M
3300006115	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jul09	Environmental	Open in IMG/M
3300006117	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE08Jun09	Environmental	Open in IMG/M
3300006119	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Jul07	Environmental	Open in IMG/M
3300006127	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE24Aug09	Environmental	Open in IMG/M
3300007538	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009082	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental	Open in IMG/M
3300009182	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300010157	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG	Environmental	Open in IMG/M
3300010158	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG	Environmental	Open in IMG/M
3300010316	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.8_DNA	Environmental	Open in IMG/M
3300010368	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNA	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011184	Freshwater bacterial and archeal communities from Indian Creek, Illinois, USA - Floc-Cal metaG	Environmental	Open in IMG/M
3300011918	Mine pit pond microbial communities from Vermont, USA - 2S	Environmental	Open in IMG/M
3300013093	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES057 metaG	Environmental	Open in IMG/M
3300013286	Freshwater microbial communities from Elizabeth Lake, Yosemite National Park, California, USA - 13020-23Y	Environmental	Open in IMG/M
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental	Open in IMG/M
3300020158	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L227-6m	Environmental	Open in IMG/M
3300020163	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L227-8m	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300020716	Freshwater microbial communities from Trout Bog Lake, WI - 13JUL2009 epilimnion	Environmental	Open in IMG/M
3300020726	Freshwater microbial communities from Trout Bog Lake, WI - 31JUL2007 hypolimnion	Environmental	Open in IMG/M
3300020731	Freshwater microbial communities from Trout Bog Lake, WI - 27JUN2007 epilimnion	Environmental	Open in IMG/M
3300020735	Freshwater microbial communities from Trout Bog Lake, WI - 25JUL2007 hypolimnion	Environmental	Open in IMG/M
3300021079	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L442-9m	Environmental	Open in IMG/M
3300021115	Freshwater microbial communities from Trout Bog Lake, WI - 31JUL2007 epilimnion	Environmental	Open in IMG/M
3300021131	Freshwater microbial communities from Trout Bog Lake, WI - 07JUL2009 epilimnion	Environmental	Open in IMG/M
3300021139	Freshwater microbial communities from Trout Bog Lake, WI - Practice 18AUG2009 epilimnion	Environmental	Open in IMG/M
3300021354	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L221-5m	Environmental	Open in IMG/M
3300022063	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v2)	Environmental	Open in IMG/M
3300022200	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)	Environmental	Open in IMG/M
3300022591	Freshwater microbial communities from thermokarst lake SAS2a, Kuujjuarapick, Canada - Sample Summer S2	Environmental	Open in IMG/M
3300022594	Freshwater microbial communities from thermokarst lake SAS2a, Kuujjuarapick, Canada - Sample Summer S1	Environmental	Open in IMG/M
3300023311	Combined Assembly of Gp0281739, Gp0281740, Gp0281741	Environmental	Open in IMG/M
3300025075	Freshwater bacterial and archeal communities from Indian Creek, Illinois, USA to study Microbial Dark Matter (Phase II) - 4B3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025091	Freshwater bacterial and archeal communities from Indian Creek, Illinois, USA - Floc-Cal metaG (SPAdes)	Environmental	Open in IMG/M
3300025353	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH06Jun08 (SPAdes)	Environmental	Open in IMG/M
3300025358	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH05Oct08 (SPAdes)	Environmental	Open in IMG/M
3300025372	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025379	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025381	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE19Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025389	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Sep07 (SPAdes)	Environmental	Open in IMG/M
3300025429	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE17Sep08 (SPAdes)	Environmental	Open in IMG/M
3300025450	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH24Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025595	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA5M (SPAdes)	Environmental	Open in IMG/M
3300025598	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025606	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA0M (SPAdes)	Environmental	Open in IMG/M
3300025616	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA6M (SPAdes)	Environmental	Open in IMG/M
3300025723	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE03Jun09 (SPAdes)	Environmental	Open in IMG/M
3300027708	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027792	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300028569 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2017_8m	Environmental	Open in IMG/M
3300031759	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003P	Environmental	Open in IMG/M
3300031813	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - 1anoA	Environmental	Open in IMG/M
3300031884	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18005	Environmental	Open in IMG/M
3300032093	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117	Environmental	Open in IMG/M
3300032117	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003	Environmental	Open in IMG/M
3300032605	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18025_13	Environmental	Open in IMG/M
3300032665	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18007	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
RCM31_100302952	3300001851	Marine Plankton	GAVNQAIAELESTARKLKAELIARGIGTYEGEDFFAEVQEYDRENISAPLVRQLADADFVKQVTTVQHIKAVVVKPLGV*
JGI24028J26656_10058884	3300002091	Lentic	MNNIIDQYGSVDKQIKELEIIKNKLKAELLARGVGEYQGEQFIAEVQEYDRENISGPLVRKFADADFVAQVTQVQHIKAVVVKSLEV*
JGI24218J26658_10209563	3300002092	Lentic	MNNIIDQYGLINQQIAELEAIKGRLKAELIARGVGEYKGESFFAEVQEYDRENISAPLVRKLSNEDFVKSVTTIQHITAVVVKPLEVA*
JGI24218J26658_10432711	3300002092	Lentic	MINIIDQYGLVGQQIAELEAIKSKLKAELIARGVGTYEGEQFYAEVQEYDRENISAPLVRKYSNEEFVKSVTTIQHIKAVVAKPLQENA*
G310J44882_100004068	3300002933	Freshwater	MNNLIDEYGIINQRIAELEEIKHKLKAEILSRGVGIYEGLSWFAEVQEYDRENISAPLVRKLSNEDFVKQVTTIQHIKAVVVKPLEA*
G310J44882_100273471	3300002933	Freshwater	MNNIIDQYGIINQQINELEIIKSKLKAELIARGVGEYQGESFFAEVQEYDRENISAPLVRKLSDEAFVRAVTTIQHIKAVVVKPLEAV*
G310J44882_100634352	3300002933	Freshwater	MNNIIDQYGALDKQIKELEAIKAKLKTELIARGIGEYQGEQFVAEVQEYDRENISAPLVRKLADADFVAQVTQIQHITAVVVKSI*
JGI26470J50227_100037812	3300003375	Freshwater	MNNIIDQYGIINQQIAELEAIKNKLKAELIARGVGEYQGESFFAEVQEYDRENISAPLVRKLADKDFVASVTQIQHIKAVVVKPLEA*
JGI26470J50227_10120926	3300003375	Freshwater	MNNIIDQYGALDKQIKELEAVKAKLKAELIARGIGEYQGEQFVAEVQEYDRENISAPLVRKLADADFVAQVTQIQHITAVVVKSI*
JGI26470J50227_10216822	3300003375	Freshwater	MNNIIDQYGLINQQINELEIIKGKLKAELIARGVGEYQGESFFAEVQEYDRENISAPLVRKLSDEQFVRSVTTIQHIKAVIVKPLEV*
Ga0007850_10064542	3300003783	Freshwater	MNNIIDQYGALDKQIKELEAIKAKLKTELIARGIGEYQGEQFVAEVQEYDRENISAPLVRKLADADFVAQVTQIQHVKAVIVKSLEA*
Ga0007865_10192453	3300003796	Freshwater	MNNIIDQYGIISQRIAELEETKSKLKAEILARGVGVYDGQAFFAEVAEYDRENISAPLVRKFGGLDFVKQVTTTQHIKAVTVKPLEA*
Ga0007842_10143712	3300003798	Freshwater	MNNIIDQYGALDKQIKELEAIKAKLKTELIARGIGEYQGEQFVAEVQEYDRENISAPLVRKLADADFVAQVTQIQHVKAVIVKSL
Ga0007817_100023512	3300003804	Freshwater	MNNIIDQYGLINQQINELEIIKSKLKAELIARGVGEYQGESFFAEVQEYDRENISAPLVRKLSDEAFVRAVTTIQHIKAVVVKPLEAV*
Ga0007817_10026736	3300003804	Freshwater	MNNIIDQYGLINQQINELEIIKSKLKAELIARGVGEYQGESFFAEVQEYDRENISAPLVRKLSDEQFVRSVTTIQHIKAVIVKPLEV*
Ga0007869_10114831	3300003809	Freshwater	MNNIIDQYGLINQQINELEIIKXKLKAELIARGVGEYQGESFFAEVQEYDRENISAPLVRKLSDEAFVRAVTTIQHIKAVVVKPLEAV*
Ga0007877_10354941	3300003814	Freshwater	MNNIIDQYGLINQQINELEIIKSKLKAELIARGVGEYQGESFFAEVQEYDRENISAPLVRKLSDEQFVRSVTTIQHIK
Ga0069718_150611623	3300004481	Sediment	MRNIIDQYGAVSQQIQALEEIKSKLKAELLARGVGNYQGEEFTAEVQEYDRENISAPLVRKLSNEDFVKAVTTIQHIKAVVVKPLEA*
Ga0069718_151341912	3300004481	Sediment	MTNIIDQYGIISQRIAELEETKSKLKAELIARGVGNYQGEQFFAEVQEYDRENISAPLVRKLSNEEFVKQVTTIQHIKAVTVKPLEA*
Ga0007797_11703972	3300004771	Freshwater	MDNIIDQYGLINQQIAELEAIKGRLKAELIARGVGEYKGESFFAEVQEYDRENISAPLVRKLSNEDFVKSVTTIQHITAVVVKPLEA*
Ga0007794_100353423	3300004774	Freshwater	MANIIDQYGIINQQINELEIIKSKLKAELIARGVGSYNGESFFAEVQEYDRENISAPLVRKFGDADFVAQVTQIQHIKAVVVKPLEAV*
Ga0007794_100428105	3300004774	Freshwater	QINELEIIKSKLKAELIARGVGEYQGESFFAEVQEYDRENISAPLVRKLSDEQFVRSVTTIQHIKAVIVKPLEV*
Ga0007794_101441951	3300004774	Freshwater	ELEIIKSKLKAELIARGVGSYNGESFFAEVQEYDRENISAPLVRKFGDADFVAQVTQIQHIKAVVVKPLEAV*
Ga0007794_101944842	3300004774	Freshwater	MNNIIDQYGLINQQIAELEAIKGRLKAELIARGVGEYKGESFFAEVQEYDRENISAPLVRKLSNEDFVKSVTTIQHITAVVVKPLEA*
Ga0007796_100347964	3300004804	Freshwater	MNTNIIDQYGVVDAQIKELELIKNKLKAELIARGVGEYQGDSFFAEVQEYDRENISAPLVRKFSNEEFVKQVTTIQHIKAVVVKPLQENA*
Ga0007809_102458831	3300004807	Freshwater	YGIINQRIAELEEIKHKLKAEILSRGVGIYEGLSWFAEVQEYDRENISAPLVRKLSNEDFVKQVTTIQHIKAVVVKPLEA*
Ga0007876_10091511	3300006071	Freshwater	MNNIIDQYGALDKQIKELEAVKAKLKAELIARGIGEYQGEQFVAEVQEYDRENISGPLVRKLADADFVAQVTQIQHITAVVVKS
Ga0007881_10993112	3300006072	Freshwater	MNNLIDEYGIINQRIAELEEIKHKLKAEILSRGVGIYEGLSWFAEVQEYDRENISAPLVRKLSNEDFVKQVTTIQHIKAVVVKPLEEV*
Ga0007881_11673421	3300006072	Freshwater	MNNIIDQYGLINQHINELEIIKSKLKAELIARGVGEYQGESFFAEVQEYDRENISAPLVRKLSDEQFVRSVTTIQHIKAVIVKPLEV*
Ga0007806_10082259	3300006100	Freshwater	MNNIIDQYGALDKQIKELEAVKAKLKAELIARGIGEYQGEQFVAEVQEYDRENISGPLVRKLADADFVAQVTQIQHITAVVVKSI*
Ga0007816_10813762	3300006115	Freshwater	MNNLIDEYGIINQRIAELEEIKHKLKAEILSRGVGIYEGLSWFAEVQEYDRENISAPLVRKLSNKDFVKQVTTIQHIKAVVVKPLEA*
Ga0007818_10170861	3300006117	Freshwater	MNNIIDQYGIISQRIAELEETKSKLKAEILARGVGVYDGQAFFAEVAEYDRENISAPLVRKFGGLDFVKQVTTTQHIKAVT
Ga0007866_10148913	3300006119	Freshwater	MNNIIDQYGIINQQINELEIIKSKLKAELIARGVGEYQGESFFAEVQEYDRENISAPLVRKLSDEQFVRSVTTIQHIKAVIVKPLEV*
Ga0007866_10613242	3300006119	Freshwater	MLNETTLKAIEDFYTPSGSVVDELGIIDRQIKELEQIKSGLKAKLLESGIGVYHGKHFTADVQEYDREQISAPLVRKLSNEEFVKSVTTVQHIKAVIVKPLEV*
Ga0007805_10459001	3300006127	Freshwater	MNNIIDQYGALDKQIKELEAVKAKLKAELIARGIGEYQGEQFVAEVQEYDRENISGPLVRKLADADFVAQVTQIQHITAV
Ga0099851_10646136	3300007538	Aqueous	MNNIIDQYGTISRQIQELEEIKSKLKAELISRGIGTYSGESFFAEVQEYDRENISAPLVRKLSNEEFVKQVTTIQHIKAVVVKPLET*
Ga0114346_10591046	3300008113	Freshwater, Plankton	MVNIIDQYGAVNQQIAELEEIKSKLKAELIARGVGSYQGEQFFAEVQEYDRENISAPLVRKFSNEDFVKSVTTIQHIKAVIVKPLEAI*
Ga0114973_101570333	3300009068	Freshwater Lake	MNNIIDQYGAVDAQIKELEAIKAKLKAELVARGIGEYQGEQFIAEVQEYDRENISAPLVRKFADKDFVAQVTQIQHIKAVVVKPLEV*
Ga0105098_101850491	3300009081	Freshwater Sediment	MLNIIDQYGSVSQQIQALEEIKSKLKAELLARGVGNYQGEQFTAEVQEYDRENISAPLVRKFSNEDFVKSVTTVQHIKAVVVKPLEA*
Ga0105098_102375721	3300009081	Freshwater Sediment	THRRITMDNIIDQYGAVSQQIQALEEIKSKLKAELIARGVGNYQGEQFAAEVQEYDRENISAPLVRKLSNEEFVKSVTTIQHIKAVVVKPLEAL*
Ga0105099_101028507	3300009082	Freshwater Sediment	MLNIIDQYGSVSQQIQALEEIKSKLKAELIARGVGNYQGEQFYAEVQEYDRENISAPLVRKLSNEEFVKQVTTIQHIKAVVVKPLEA*
Ga0105103_105209483	3300009085	Freshwater Sediment	NIIDQYGSVSQQIQALEEIKSKLKAELLARGVGNYQGEQFTAEVQEYDRENISAPLVRKFSNEDFVKSVTTVQHIKAVVVKPLEA*
Ga0114978_104879312	3300009159	Freshwater Lake	MNNIIDQYGAVDKQIKELEAIKNKLKAELLARGVGEYQGEQFIAEVQEYDRENISGPLVRKFADADFVAQVTQVQHIKAVVVKSLEV*
Ga0114979_104740783	3300009180	Freshwater Lake	MENIIDQYGIISQRIAELEETKSKLKAEILARGIGTYSGQTFFADVQEYDRENISAPLVRKFSNEEFVKSVTTVQHIKAVTVKLLEV*
Ga0114959_100251308	3300009182	Freshwater Lake	MNNIIDQYGAVSKQIAELEEIKSKLKAELIARGVGNYQGEQFTAEVQEYDRENISAPLVRKFSNEEFVKSVTTIQHIKAVVVKPLEV*
Ga0114974_101026551	3300009183	Freshwater Lake	MNNIIDQYGAVSQQIQALEEIKSKLKAELIARGVGNHQGEQFVAEVQEYDRENISAPLVRKLSNEEFVKSVTTIQHIKAVVVKPLQENV*
Ga0114964_102213961	3300010157	Freshwater Lake	NGGIMTNIIDQYGTIDKQIKELEIIKSKLKAELVARGIGSYEGEQFAAEVQEYDREQISTPLVRKYSDADFIKQVTTVQHITAIVVKQLGA*
Ga0114960_100963284	3300010158	Freshwater Lake	MNNIIDQYGAVSKQIAELEEIKSKLKAELIARGVGNYQGEQFTAEVQEYDRENISAPLVRKFSNEEFVKSVTTIQHIKAVVVKSLEV*
Ga0136655_11565163	3300010316	Freshwater To Marine Saline Gradient	MNNIIDQYGTISRQIQELEEIKSKLKAELISRGIGTYSGESFFAEVQEYDRENISAPLVRKLSNEEFVKSVTTIQHIKAVVVKPLEA*
Ga0129324_103587071	3300010368	Freshwater To Marine Saline Gradient	MNNIIDQYGAVSQQIQALEEIKHKLKAEILARGVGVYDGLSWFAEVQEYDRENISAPLVRKLSNEEFVKSVTTIQHIKAVVIKPLEA*
Ga0133913_109460316	3300010885	Freshwater Lake	MTNIIDQYGTIDKQIKELEIIKSKLKAELVARGIGSYEGEQFAAEVQEYDREQISTPLVRKYSDADFIKQVTTVQHITAIVVKQLGA*
Ga0136709_10014193	3300011184	Freshwater	MNNIIDQYGSVSQQIQALEEIKSKLKAELIARGVGSYQGEQFFAEVQEYDRENISAPLVRKLSNEEFVKSVTTIQHIKAVVVKPLEA*
Ga0120090_1102401	3300011918	Mine Pit Pond	MNNIIDQYGSVSQQIQALEEIKSKLKAELIARGVGSYQGEQFFAEVQEYDRENISAPLVRKLSNEEFVKSVTTIQHIKAVVVKPLEAL*
Ga0164296_10550324	3300013093	Freshwater	MENIIDQYGVISQRIAELEETKSKLKAEILARGVGVYDGQAFFAEVAEYDRENISAPLVRKLGGLDFVKQVTTTQHITSVTVKLLEVL*
Ga0136641_10190965	3300013286	Freshwater	MTNIIDQYGIINQQINELEIIKSKLKAELIARGVGSYNGESFFAEVQEYDRENISAPLVRKFGDADFVAQVTQIQHIKAVVVKPLQENA*
Ga0136641_10313811	3300013286	Freshwater	MNMIDDLGILNQQIAKLEEQARTIKQALIARGVGSYNGESFFAEVQEYDRENISAPLVRKFGDAGFVAQVTQIQHIKAVVVKPLGL*
Ga0181344_11384553	3300017754	Freshwater Lake	MLNIIDQYGSVSQQIQALEEIKSKLKAELIARGVGNYQGEQFAAEVQEYDRENISAPLVRKLSNEEFVKSVTTIQHIKAVVVKPLEAL
Ga0194038_11010402	3300020158	Anoxic Zone Freshwater	MNNIIDQYGAIDAQIKELEVIKNKLKAELLARGVGEYQGESFFAEVQEYDRENISAPLVRKLADKDFVASVTTVQHIKAVVVKPLEA
Ga0194039_12981981	3300020163	Anoxic Zone Freshwater	MDNIIDQYGVISQRIAELEEIKSRLKAELIARGVGSYNGESFFAEVQEYDRENISAPLVRKFGDADFVAQVTQIQHIKAVVVKPLEV
Ga0211731_105400418	3300020205	Freshwater	MNNIIDQYGVISKQIQELEEIKSKLKAELIARGIGTYEGEAFFAEVQEYDRENISAPLVRKLSNEEFVKSVTTIQHIKAVVVKPLEA
Ga0214207_10224694	3300020716	Freshwater	MNTNIIDQYGIINQQIAELETIKAKLKAELIARGVGNYEGESFFAEVQEYDRENISAPLVRKLADADFVAQVTQI
Ga0214207_10232071	3300020716	Freshwater	MNNIIDQYGALDKQIKELEAIKAKLKTELIARGIGEYQGEQFVAEVQEYDRENISAPLVRKLADADFVAQVTQIQHITAVVVKSI
Ga0214220_100164712	3300020726	Freshwater	MNNLIDEYGIINQRIAELEEIKHKLKAEILSRGVGIYEGLSWFAEVQEYDRENISAPLVRKLSNEDFVKQVTTIQHIKAVVVKPLEA
Ga0214170_10400151	3300020731	Freshwater	MNNLIDEYGIINQRIAELEEIKHKLKAEILSRGVGIYEGLSWFAEVQEYDRENISAPLVRKLSNEDFVKQVTTIQHIKAVVV
Ga0214219_10078794	3300020735	Freshwater	MNNIIDQYGIINQQINELEIIKSKLKAELIARGVGEYQGESFFAEVQEYDRENISAPLVRKLSDEAFVRAVTTIQHIKAVVVKPLEAV
Ga0194055_101036624	3300021079	Anoxic Zone Freshwater	MTNIIDQYGIINQQINELEIIKSKLKAELIARGVGSYNGDSFFAEVQEYDRENISAPLVRKFADADFVAQVTQIQHIKAVVVKPLEAV
Ga0214174_1191031	3300021115	Freshwater	MNNLIDEYGIINQRIAELEEIKHKLKAEILSRGVGIYEGLSWFAEVQEYDRENISAPLVRKLSNEDFVKQVTTIQHIKAVVVK
Ga0214206_10049764	3300021131	Freshwater	MNNIIDQYGALDKQIKELEAVKAKLKAELIARGIGEYQGEQFVAEVQEYDRENISGPLVRKLADADFVAQVTQIQHITAVVVKSI
Ga0214166_10690113	3300021139	Freshwater	MNNIIDQYGALDKQIKELEAVKAKLKAELIARGIGEYQGEQFVAEVQEYDRENISAPLVRKLADADFVAQVTQIQHITAVVVKSI
Ga0194047_100355392	3300021354	Anoxic Zone Freshwater	LNNIIDQYGVVSQQIQALEEIKSKLKAELLARGVGNYQGEQFAAEVQEYDRENISAPLVRKLSNEEFVKSVTTIQHIKAVVVKPLEAV
Ga0212029_10367212	3300022063	Aqueous	MNNIIDQYGTISRQIQELEEIKSKLKAELISRGIGTYSGESFFAEVQEYDRENISAPLVRKLSNEEFVKQVTTIQHIKAVVVKPLET
Ga0196901_10719504	3300022200	Aqueous	AVSQQIQALEEIKHKLKAEILARGVGVYDGLSWFAEVQEYDRENISAPLVRKLSNEEFVKSVTTIQHIKAVVIKPLEA
Ga0236341_10041152	3300022591	Freshwater	MNNIIDQYGLINQQINELEIIKSKLKAELIARGVGEYQGESFFAEVQEYDRENISAPLVRKLSDEQFVRSVTTIQHIKAVIVKPLEV
Ga0236341_10074075	3300022591	Freshwater	MTNIIDQYGIINQQINELEIIKSKLKAELIARGVGEYQGESFFAEVQEYDRENISAPLVRKLSNAEFVRQVTTIQHIKAVVVKPLEA
Ga0236340_10324385	3300022594	Freshwater	MNNIIDQYGLINQQINELEIIKSKLKAELIARGVGEYQGESFFAEVQEYDRENISAPLVRKLSDEQFVRSVTTIQHIKGVIVKPLEV
Ga0256681_112346922	3300023311	Freshwater	MNNLIDEYGIINQRITELEEIKHKLKAEILSRGVGVYEGLSWFAEVQEYDRENISAPLVRKLSNEDFVKQVTTIQHIKAVVVKPLEA
Ga0209615_1012444	3300025075	Freshwater	MLNIIDQYGSVSQQIQALEEIKSKLKAELIARGVGSYQGEQFFAEVQEYDRENISAPLVRKLSNEEFVKSVTTIQHIKAVVVKPLEAL
Ga0209616_100131711	3300025091	Freshwater	MNNIIDQYGSVSQQIQALEEIKSKLKAELIARGVGSYQGEQFFAEVQEYDRENISAPLVRKLSNEEFVKSVTTIQHIKAVVVKPLEA
Ga0208255_1172531	3300025353	Freshwater	MNNIIDQYGLINQQINELEIIKSKLKAELIARGVGDYQGESFFAEVQEYDRENISAPLVRKLSDEQFVRSVTTIQHIKAVVVKPLEAV
Ga0208504_100053411	3300025358	Freshwater	MNNIIDQYGALDKQIKELEAIKAKLKTELIARGIGEYQGEQFVAEVQEYDRENISAPLVRKLADADFVAQVTQIQHVKAVIVKSLEA
Ga0207957_10132715	3300025372	Freshwater	MNNIIDQYGLINQQINELEIIKGKLKAELIARGVGEYQGESFFAEVQEYDRENISAPLVRKLSDEQFVRSVTTIQHIKAVIVKPLEV
Ga0208738_10410822	3300025379	Freshwater	MNNLIDEYGIINQRIAELEEIKHKLKAEILSRGVGIYEGLSWFAEVQEYDRENISAPLVRKLSNKDFVKQVTTIQHIKAVVVKPLEA
Ga0208871_10010663	3300025381	Freshwater	MNNIIDQYGIISQRIAELEETKSKLKAEILARGVGVYDGQAFFAEVAEYDRENISAPLVRKFGGLDFVKQVTTTQHIKAVTVKPLEA
Ga0208871_10065646	3300025381	Freshwater	MNNLIDEYGIINQRIAELEEIKHKLKAEILSRGVGIYEGLSWFAEVQEYDRENISAPLVRKLSNEDFVKQVTTIQHIKAVVVKPLEEV
Ga0208871_10117902	3300025381	Freshwater	MNNIIDQYGLINQQINELEIIKSKLKAELIARGVGEYQGESFFAEVQEYDRENISAPLVRKLSDEAFVRAVTTIQHIKAVVVKPLEAV
Ga0208257_10173255	3300025389	Freshwater	LIDEYGIINQRIAELEEIKHKLKAEILSRGVGIYEGLSWFAEVQEYDRENISAPLVRKLSNEDFVKQVTTIQHIKAVVVKPLEA
Ga0208500_10310342	3300025429	Freshwater	MNNIIDQYGLINQQINELEIIKSKLKAELIARGVGEYQGESFFAEVQEYDRENISAPLVRKLADEDFVKQVTVTQHVKAVVVARLGV
Ga0208744_10256101	3300025450	Freshwater	LDKQIKELEAIKAKLKTELIARGIGEYQGEQFVAEVQEYDRENISAPLVRKLADADFVAQVTQIQHITAVVVKSI
Ga0208248_10361853	3300025595	Freshwater	MDNIIDQYGLINQQIAELEAIKGRLKAELIARGVGEYKGESFFAEVQEYDRENISAPLVRKLSNEDFVKSVTTIQHITAVVVKPLEA
Ga0208248_10364534	3300025595	Freshwater	INELEIIKSKLKAELIARGVGEYQGESFFAEVQEYDRENISAPLVRKLSDEQFVRSVTTIQHIKAVIVKPLEV
Ga0208248_11083243	3300025595	Freshwater	NIIDQYGIINQQINELEIIKSKLKAELIARGVGSYNGESFFAEVQEYDRENISAPLVRKFGDADFVAQVTQIQHIKAVVVKPLEAV
Ga0208379_10086141	3300025598	Freshwater	YGIINQRIAELEEIKHKLKAEILSRGVGIYEGLSWFAEVQEYDRENISAPLVRKLSNEDFVKQVTTIQHIKAVVVKPLEA
Ga0207954_10620064	3300025606	Freshwater	MNTNIIDQYGVVDAQIKELELIKNKLKAELIARGVGEYQGDSFFAEVQEYDRENISAPLVRKFSNEEFVKQVTTIQHIKAVVVKPLQENA
Ga0208613_10164914	3300025616	Freshwater	MANIIDQYGIINQQINELEIIKSKLKAELIARGVGSYNGESFFAEVQEYDRENISAPLVRKFGDADFVAQVTQIQHIKAVVVKPLEAV
Ga0208741_1000054030	3300025723	Freshwater	MYNTHLHSNNIGGSMNNIIDQYGIISQRIAELEETKSKLKAEILARGVGVYDGQAFFAEVAEYDRENISAPLVRKFGGLDFVKQVTTTQHIKAVTVKPLEA
Ga0209188_10601832	3300027708	Freshwater Lake	MNNIIDQYGAVSKQIAELEEIKSKLKAELIARGVGNYQGEQFTAEVQEYDRENISAPLVRKFSNEEFVKSVTTIQHIKAVVVKSLEV
Ga0209287_102669883	3300027792	Freshwater Sediment	MLNIIDQYGSVSQQIQALEEIKSKLKAELIARGVGNYQGEQFYAEVQEYDRENISAPLVRKLSNEEFVKQVTTIQHIKAVVVKPLEA
Ga0209777_102109046	3300027896	Freshwater Lake Sediment	IINQQINELEIIKSKLKAELIARGVGEYQGESFFAEVQEYDRENISAPLVRKLSDEAFVRAVTTIQHIKAVVVKPLEAV
Ga0209777_111208062	3300027896	Freshwater Lake Sediment	MNNIIDQYGLINQQINELEIIKSKLKAELIARGVGEYQGESFFAEVQEYDRENISAPLVRKLSDEQFVRSVTTIQHIKAVIVKPLE
(restricted) Ga0247843_100102435	3300028569	Freshwater	MKNIIDQYGAVSQQIQALEEIKSKLKAELIARGVGNYEGEQFFAEVLEYDREQISAPLVRKLSDEAFVKSVTTVQHIKAVVVKPLQENV
Ga0316219_10015758	3300031759	Freshwater	MDNLIDQYGSIQAAINELEITKQKLKAEILARGVGVYEGLSWFAEVQEYDRENISAPLVRKLSNEDFVKQVTTIQHIKAVVVKPLEA
Ga0316219_10300224	3300031759	Freshwater	MNNIIDQYGIINQQINELEIIKSKLKAELIARGVGEYQGESFFAEVQEYDRENISAPLVCKLSDEAFVRAVTTIQHIKAVIVKPLEV
Ga0316219_13435092	3300031759	Freshwater	MENIIDQYGVISQRIAELEETKSKLKAEILARGVGVYDGQAFFAEVAEYDRENISAPLVRKLGGLDFVKQVTTTQHITSVTVKLLEVL
Ga0316217_1001193215	3300031813	Freshwater	MNNIIDQYGIINQQINELEIIKSKLKAELIARGVGEYQGESFFAEVQEYDRENISAPLVRKLSDEQFVRSVTTIQHIKAVIVKPLEV
Ga0316217_100504126	3300031813	Freshwater	MSNIIDQYGLINQQINELEIIKSKLKAELISRGVGEYQGESFFAEVQEYDRENISAPLVRKFADAEFVTRVTQIQHIKAVIVKQLEVA
Ga0316220_11924224	3300031884	Freshwater	AAINELEITKQKLKAEILARGVGVYEGLSWFAEVQEYDRENISAPLVRKLSNEDFVKQVTTIQHIKAVVVKPLEA
Ga0315902_112254212	3300032093	Freshwater	MVNIIDQYGAVNQQIAELEEIKSKLKAELIARGVGSYQGEQFFAEVQEYDRENISAPLVRKFSNEDFVKSVTTIQHIKAVIVKPLEA
Ga0316218_10474572	3300032117	Freshwater	MNNIIDQYGIINQQINELEIIKSKLKAELIARGVGEYQGESFFAEVQEYDRENISAPLVRKLSDEAFVRAVTTIQHIKAVIVKPLEV
Ga0316232_11184751	3300032605	Freshwater	MNNIIDQYGALDKQIKELEAIKAKLKTELIARGIGEYQGEQFVAEVQEYDRENISAPLVRKLADADFVAQVT
Ga0316221_10197197	3300032665	Freshwater	MDNLIDQYGSIQAAINELEITKQKLKAEILARGVGVYEGLSWFAEVQEYDRENISAPLVRKLSNEDFVKQVTTIQHIKAVVIKPLEA
Ga0335031_0234922_171_434	3300034104	Freshwater	MNNIIDQYGAVSQQIQALEEIKSKLKAELIARGVGNYQGEQFAAEVQEYDRENISAPLVRKLSNEEFVKSVTTIQHIKAVVVKPLEV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters