Basic Information | |
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Family ID | F085065 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 111 |
Average Sequence Length | 48 residues |
Representative Sequence | MTKQELLKLLKLLSAIESAMSIHRATLPDYLFEQIDAAVAVLEREILK |
Number of Associated Samples | 59 |
Number of Associated Scaffolds | 111 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Viruses |
% of genes with valid RBS motifs | 81.98 % |
% of genes near scaffold ends (potentially truncated) | 21.62 % |
% of genes from short scaffolds (< 2000 bps) | 82.88 % |
Associated GOLD sequencing projects | 54 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.73 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Duplodnaviria (53.153 % of family members) |
NCBI Taxonomy ID | 2731341 |
Taxonomy | All Organisms → Viruses → Duplodnaviria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment (31.532 % of family members) |
Environment Ontology (ENVO) | Unclassified (53.153 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) (61.261 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64. |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 53.95% β-sheet: 0.00% Coil/Unstructured: 46.05% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.73 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Freshwater Lake Freshwater Lentic Freshwater Freshwater Lake Freshwater Sediment Surface Ice Estuarine Salt Marsh Wetland Estuarine Estuarine Water |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
JGIcombinedJ13530_1010274541 | 3300001213 | Wetland | MTKQELLNLLKLISAIESAMSINKATLPSYLFEQIDEAVFVLEREILK* |
Ga0049081_100089918 | 3300005581 | Freshwater Lentic | MTKQEMLKILRLLSAMESAMLCNKQTMPDYLFEEIDAVLVLLEKAILK* |
Ga0049081_100362564 | 3300005581 | Freshwater Lentic | MTKQELFKLLKLLSAIESAMSINKAQLPDYLFQEIDAAVVVLEREILK* |
Ga0049081_100516772 | 3300005581 | Freshwater Lentic | MTKQELFKLLKLLSAIESAMSINRAQLPDYLFEQIDAAVVVLEREILK* |
Ga0049081_100661762 | 3300005581 | Freshwater Lentic | MTKQEMTKQEMLKILRLLSAIESAMSINKAQLPDYLFQEIDAAVVVLEREILND* |
Ga0049081_101063415 | 3300005581 | Freshwater Lentic | MTKQELLNLLKLISAIESAMSIHRATLPDYLFQEIDAAVVVLEREILNEQR* |
Ga0049081_101811082 | 3300005581 | Freshwater Lentic | MTKQEMTKQELLKLLKLLSAIESAMSIHRATLPDYLFQEIDAAVVVLEREILNDQR* |
Ga0049085_100113562 | 3300005583 | Freshwater Lentic | MLKVLRLLSAIESVMLANKQTIPDYLFADIDAAVVVLEREILK* |
Ga0049085_100122324 | 3300005583 | Freshwater Lentic | MTKQELLKLLKLLSAIESVMLANKQTIPDYLFADIDAAVVVLEREILK* |
Ga0049085_100551345 | 3300005583 | Freshwater Lentic | MTKQELFKLLKLLSAIESAMSINKTTLPDYLFEQIDAAVVVLEREILK* |
Ga0049085_102618742 | 3300005583 | Freshwater Lentic | MTKKELLKLLKLLSAIESAMSIHKATLPDYLFEQIDEAVAVLEREILNEQR* |
Ga0049082_101697253 | 3300005584 | Freshwater Lentic | MTKQELLKLLKLLSAIESAMSINRTTLPDYLFEQVDAAVVVLEREILK* |
Ga0049082_103051973 | 3300005584 | Freshwater Lentic | MTKQEMLKILRLLSAIESAMSIHRATLPDYLFEQVDAAVVVLEREILNDAR* |
Ga0102829_11129141 | 3300009026 | Estuarine | QTQGEEHMTKQELFKLLKLLSAIESAMSINKTTLPDYLFEQIDAAVVVLEREILK* |
Ga0114973_1000290113 | 3300009068 | Freshwater Lake | MTKPELLQLLKLLSAIEGATTTSLPHYLFEQIDAAVAVLEREILK* |
Ga0114973_101052884 | 3300009068 | Freshwater Lake | MTKQEMLRILRLLSAIESAMSIHRTTLPDYLFEQIDAAVGVLEKEILNEQK* |
Ga0114980_101620362 | 3300009152 | Freshwater Lake | MTKQELLALLKLLSAIESAMSVNRAQLPNYLFEQIDAAVLTLEREILK* |
Ga0114968_100061696 | 3300009155 | Freshwater Lake | MTKQELLALLKLLSAIESAMSVNKAQLPNYLFEQIDAAVAVLEREILK* |
Ga0114968_101737865 | 3300009155 | Freshwater Lake | MTKQEMLRILRLLSAIESAMSIHRTTLPDYLFEQIDAAVVVLEKEILNEQK* |
Ga0114968_106673442 | 3300009155 | Freshwater Lake | MTKQELLNLLKLLSAIESAMSIHKATLPSYLFEQIDEAVFVLEREILK* |
Ga0114966_101641395 | 3300009161 | Freshwater Lake | MTKQELLALLKLLSAIESATSVNKAQLPSYLFEQIDAAVAVLEREILK* |
Ga0114970_100003141 | 3300009163 | Freshwater Lake | MTKPELLQLLKLLSAIEGATTTSLPHYLFEQIDAAVA |
Ga0114970_1000133626 | 3300009163 | Freshwater Lake | GDAMTKPELLQLLKLLSAIEGATTTSLPHYLFEQIDAAVAVLEREILK* |
Ga0114975_101420025 | 3300009164 | Freshwater Lake | MTKQELLQLLKLLSAIEGATTTSLPHYLFEQIDTAVAVLEREILK* |
Ga0114969_100367515 | 3300009181 | Freshwater Lake | MTKQELLQLLKLLSAIEGATTTSLPHYLFEQIDAAVMTLEREILK* |
Ga0114969_102272093 | 3300009181 | Freshwater Lake | MTKQELLQLLKLLSAIEGATTTSLPHYLFEQIDAAVAVLEREILKWQ* |
Ga0114967_102830123 | 3300010160 | Freshwater Lake | MTKQELLRLLKLLSAIESAMSIHRTTLPDYLFEQIDAAVVMLEREILNEQR* |
Ga0133913_106307412 | 3300010885 | Freshwater Lake | MTKQEMLKILRLLSAIESVMLANKQAIPDYLFQEIDAAVAVLEREILNEQR* |
Ga0133913_113618807 | 3300010885 | Freshwater Lake | LKLLSAIESATSVNKAQLPSYLFEQIDAAVAVLEREILK* |
Ga0153800_10049862 | 3300011995 | Freshwater | MTKQELLKLLKLLSAIESAISINRAQLPDYLFEQIDAAVVVLEREILNDQR* |
Ga0153805_10002501 | 3300012013 | Surface Ice | MTKQEMLKILRLLSAIESAMSINKAQLPDYLFQEIDAAVVVLERDILNEQR* |
Ga0177922_100108981 | 3300013372 | Freshwater | EMTKQEMLKILRLLSAMESALSINRAQLPDYLFEQIDAAVAVLEKEILNDAR* |
Ga0177922_100342251 | 3300013372 | Freshwater | MTKQEMLKILRLLSAMESALSINRAQLPDYLFEQIDYAVAALEREILNDAR* |
Ga0177922_109631084 | 3300013372 | Freshwater | MTKQEMLKILRLLSAIESAMSIHKATLPNYLFEQIDYAVAALEREILNDQR* |
Ga0177922_110713861 | 3300013372 | Freshwater | MTKQEMLNLLKLLSAIESAMSIHRATLPNYLFEQIDYAVAALELEILND* |
Ga0177922_110888073 | 3300013372 | Freshwater | MTKQELLRLLKLLSAIESAMSINRAQLPDYLFQEIDAAVVVLEREILND* |
Ga0177922_112082712 | 3300013372 | Freshwater | MVNAMSKTEMLKILRLLSAIESVMLANKQTIPDYLFADIDAAVVVLEREILK* |
Ga0177922_112398073 | 3300013372 | Freshwater | MTKQEMLNLLKLLSAIESAMSINRATLPDYLFGQIDAAVVVLEREILND* |
Ga0181338_10439222 | 3300015050 | Freshwater Lake | MTKQEMLKILRLLSAIESVMLANKQAIPDYLFEQIDAAVVVLEREILK* |
Ga0181338_10580832 | 3300015050 | Freshwater Lake | MTKQELLNLLKMLSAIESAMSINRATLPSYLFEQIDAAVVVLEREILNDAR* |
Ga0182046_16056902 | 3300016776 | Salt Marsh | MTKQEMLKILRLLSAIESAMSIHRTTLPDYLFEQIDAAVAVLEREILNEQK |
Ga0181350_10264444 | 3300017716 | Freshwater Lake | MTKQELLNLLKMLSAIESAMSINRATLPSYLFEQIDAAVVVLEREILNDAR |
Ga0181350_10866033 | 3300017716 | Freshwater Lake | MTKQEMLNLLKLLSAIESAMSIHRATLPNYLFEQIDYAVAALEREILNDTR |
Ga0181350_11040582 | 3300017716 | Freshwater Lake | MTKQELLKLLKLLSAIESAMSINRATLPDYLFEQVDAAVVVLEREILK |
Ga0181350_11284672 | 3300017716 | Freshwater Lake | MTKQEMLKILRLLSAIESAMSIHRATLPDYLFQEIDAAVAVLEREILK |
Ga0181358_12492012 | 3300017774 | Freshwater Lake | MTKQELLKLLKLLSAIESAISINRAQLPDYLFEQIDAAVVVLEREILNDQK |
Ga0181357_12071452 | 3300017777 | Freshwater Lake | MTKQELLKLLKLLSAIESAMSIHRATLPDYLFGQIDAAVVVLEREILNDQK |
Ga0181357_13342062 | 3300017777 | Freshwater Lake | MTKKELLNLLKLLSAIESAMLCNKQTMPDYLFEQIDYAVAALEREILND |
Ga0181357_13366442 | 3300017777 | Freshwater Lake | MTKQELLNLLKLLSAIESAMSIHKATLPNYLFEQIDYAVAALEREILND |
Ga0181349_11001601 | 3300017778 | Freshwater Lake | HMTKQEMLKILRLLSAIESVMLANKQAIPDYLFEQIDAAVVVLEREILK |
Ga0181348_11103025 | 3300017784 | Freshwater Lake | AIMTKQELFKLLKLLSAIESAMSINKTTLPDYLFEQIDAAVVVLEREILK |
Ga0181355_10309311 | 3300017785 | Freshwater Lake | LFKLLKLLSAIESAMSINKTTLPDYLFEQIDAAVVVLEREILK |
Ga0181359_11654852 | 3300019784 | Freshwater Lake | MTKQELFKLLKLLSAIESAMSINKAQLPDYLFQEIDAAVVVLEREILK |
Ga0211731_1134074811 | 3300020205 | Freshwater | MSKQELLMLLKLLSAIESAMSVNKAQLPSYLFEQIDVAVVVLEREILK |
Ga0222714_1001945812 | 3300021961 | Estuarine Water | VGFDMTKQELLNLLKLLSAIESAMSIHKATLPDYLFQQIDAAVAVLEREILND |
Ga0222714_105271232 | 3300021961 | Estuarine Water | MTKQEMLKILRLLSAIESVMLANKQAIPDYLFEQIDAAVAVLEKEILE |
Ga0222713_106391661 | 3300021962 | Estuarine Water | MTKQELLKLLKLLSAIESAMSINKATLPSYLFEQIDYAVAALEREILK |
Ga0181354_10276684 | 3300022190 | Freshwater Lake | MTKQEMLKILRLLSAIESVMLANKQAIPDYLFEQIDAAVVVLEREILK |
Ga0181351_10469653 | 3300022407 | Freshwater Lake | MTKQELFKLLKLLSAIESAMSINKTTLPDYLFEQIDAAVVVLEREILK |
Ga0244775_112406813 | 3300024346 | Estuarine | MLKILRLLSAIESAMSINKATLPSYLFEQIDEAVFVLEREILNDQK |
Ga0208974_100008512 | 3300027608 | Freshwater Lentic | MTKQELLNLLKLISAIESAMSIHRATLPDYLFQEIDAAVVVLEREILNEQR |
Ga0208942_101120510 | 3300027627 | Freshwater Lentic | MVNAMSKTEMLKVLRLLSAIESVMLANKQTIPDYLFADIDAAVVVLEREILK |
Ga0208942_10405002 | 3300027627 | Freshwater Lentic | MTKQELLKLLKLLSAIESVMLANKQTIPDYLFADIDAAVVVLEREILK |
Ga0208975_10375902 | 3300027659 | Freshwater Lentic | MTKQELFKLLKLLSAIESAMSINRAQLPDYLFEQIDAAVVVLEREILK |
Ga0208975_11052172 | 3300027659 | Freshwater Lentic | MTKQEMTKQELLKLLKLLSAIESAMSIHRATLPDYLFQEIDAAVVVLEREILNDQR |
Ga0209087_10816273 | 3300027734 | Freshwater Lake | MTKQELLQLLKLLSAIEGATTTSLPHYLFEQIDTAVAVLEREILK |
Ga0209190_100010736 | 3300027736 | Freshwater Lake | MTKPELLQLLKLLSAIEGATTTSLPHYLFEQIDAAVAVLEREILK |
Ga0209190_10291055 | 3300027736 | Freshwater Lake | MTKQEMLRILRLLSAIESAMSIHRTTLPDYLFEQIDAAVVVLEKEILNEQK |
Ga0209190_11013795 | 3300027736 | Freshwater Lake | LKLLSAIESAMSVNKAQLPNYLFEQIDAAVAVLEREILK |
Ga0209596_100029828 | 3300027754 | Freshwater Lake | MTKQELLALLKLLSAIESAMSVNKAQLPNYLFEQIDAAVAVLEREILK |
Ga0209596_10590735 | 3300027754 | Freshwater Lake | MTKQELLQLLKLLSAIEGATTTSLPHYLFEQIDAAVMTLEREILK |
Ga0209596_11776233 | 3300027754 | Freshwater Lake | MTKQELLNLLKLLSAIESAMSIHKATLPSYLFEQIDEAVFVLEREILK |
Ga0209088_100048888 | 3300027763 | Freshwater Lake | MTKQELLALLKLLSAIESAMSVNRAQLPNYLFEQIDAAVLTLEREILK |
Ga0209086_101508896 | 3300027770 | Freshwater Lake | MTKQELLNLLKLLSAIESAMSIHKATLPSYLFEQIDEAVFV |
Ga0209354_100779582 | 3300027808 | Freshwater Lake | MTKQELLNLLKLISAIESAMSINKATLPSYLFEQIDAAVVVLEREILNDAR |
Ga0315291_104885852 | 3300031707 | Sediment | MTKQELLKLLKLLSAIESAMSIHKATLPDYLFQQIDAAVAVLEREILK |
Ga0315291_106537462 | 3300031707 | Sediment | MTKQEMLNLLKLLSAIEGAMFTNTAQVPDHLFEQIGAAVAVLEREILNEQR |
Ga0315291_109743201 | 3300031707 | Sediment | LLKLLSAIESAMSIHKATLPDYLFQQIDAAVAVLEREILE |
Ga0315291_112840013 | 3300031707 | Sediment | MTKQEMLNLIKLLSAIEGAIFTNTAQVPDHLFEQIGAAVAVLEKEILND |
Ga0315293_103057084 | 3300031746 | Sediment | MTKQEMLKILRLLSAIESVMLANKQAIPDYLFEQIDAAVAVLEREILE |
Ga0315293_109957582 | 3300031746 | Sediment | MTKQEMLNLLKLLSAIEGAMFTNTAQVPDHLFEQIGAAVAVLEKEILND |
Ga0315288_103733795 | 3300031772 | Sediment | MTKQEMLNLLKLLSAIEGAMFNNTAQVPDHLFEQIGAAVAVL |
Ga0315290_105947844 | 3300031834 | Sediment | MTKQEMLNLLKLLSAIEGAIFTNTAQVPDHLFEQIGAAVAVLEREILE |
Ga0315297_117205682 | 3300031873 | Sediment | MTKQEMLNLLKLLSTIEGAIFTNTAQVPDHLFEQIGAAVAVLEKEILND |
Ga0315285_104180552 | 3300031885 | Sediment | MTKQELLKLLKLLSAVESAMSINKAQLPDYLFQEIDAAVAVLEKEILNEQR |
Ga0315285_104340103 | 3300031885 | Sediment | MTKQEMLNLLKLLSAIEGAMFTNTAQVPDHLFEQIGAAVALLEKEILK |
Ga0315285_105460541 | 3300031885 | Sediment | MTKQEMLKILRLLSAIESVMLANKQAIPDYLFEQIDAAVAVLEREILND |
Ga0315285_107435902 | 3300031885 | Sediment | MTKQEMLNLLKLLSAIESAMSINRATLPDYLFEQIGAAVAVLEREILE |
Ga0315294_104373794 | 3300031952 | Sediment | MTKQEMLNLLKLLSTIEGAIFTNTAQVPDHLFEQIGAAVAVLEREILK |
Ga0315294_107140512 | 3300031952 | Sediment | MTKQELLKLLKLLSAIESAMSIHKATLPDYLFQQIDAAVAVLEKEILND |
Ga0315274_113950491 | 3300031999 | Sediment | MTKQEMLNLLKLLSAIEGAIFTNTAQVPDHLFEQIGAAVAVL |
Ga0315274_114045641 | 3300031999 | Sediment | MTKQELLKLLKLLSAIESAMSIHRATLPDYLFQQIDAAVAVLEREIL |
Ga0315274_116921833 | 3300031999 | Sediment | EHMTKQEMLKILRLLSAIESVMLANKQAIPDYLFEQIDAAVAVLEREILE |
Ga0315284_106653371 | 3300032053 | Sediment | QEMLNLLKLLSAIEGAMFTNTAQVPDHLFEQIGAAVAVLEREILE |
Ga0315284_108564694 | 3300032053 | Sediment | MTKQELLKLLKLLSAIESVMLCNKQTMPDYLFEQIDAAVAVLEREILE |
Ga0315284_115315721 | 3300032053 | Sediment | MTKQEMLNLLKLLSAIEGAMFNNTAQVPDHLFEQIGAAVAVLEREILNEQR |
Ga0315292_108903774 | 3300032143 | Sediment | VGDAMTKQEMLNLLKLLSAIESAMSIHKATLPNYLFEQI |
Ga0315295_108428831 | 3300032156 | Sediment | MTKQEMLNLLKLLSAIEGAMFTNTAQVPDHLFEQIGAAVAVL |
Ga0315268_104995035 | 3300032173 | Sediment | MSKQELLQLLKLLSAIESAMSINKAQLPNYLFEQIDAAVTVLEREILK |
Ga0315268_106842272 | 3300032173 | Sediment | MTKQELLKLLKLLSAIESAMSIHRATLPDYLFEQIDAAVAVLEREILK |
Ga0315268_120466263 | 3300032173 | Sediment | MTKQEMLNLLKLLSAIEGAMFTNTAQVPDHLFEQIGAAVAV |
Ga0315271_102077531 | 3300032256 | Sediment | MTKQELLKLLKLLSAIESAMSIHKATLPSYLFEQIDEAVFVLEREILK |
Ga0315271_107499995 | 3300032256 | Sediment | MTKQELLKLLKLLSAIESAMSIHRATLPDYLFQQIDAAVAVLEREI |
Ga0315287_128524681 | 3300032397 | Sediment | MLNLLKLLLAIESAMSIHKATLPNYLFEQIDYAVAALEREILNDQK |
Ga0315275_122898873 | 3300032401 | Sediment | MTKQEMLNLLKLLSAIEGAIFTNTAQVPDHLFEQIGAAVALLEKEILK |
Ga0315273_105416503 | 3300032516 | Sediment | MTKQELLKLLKLLSAIESAMSIHKATLPDYLFQQIDAAVAVLEREILE |
Ga0315273_122175411 | 3300032516 | Sediment | WVFVGNAMTKQEMLNLLKLLSAIESAMSIHRATLPNYLFEQIDYAVAALEREILNERKD |
Ga0334722_101627196 | 3300033233 | Sediment | MTKQEMLRILRLLSAIESAMSINKATLPSYLFEQIDEAVAVLEREILK |
Ga0334722_102475016 | 3300033233 | Sediment | MTKQELLKLLKLLSAIESAMSIHRATLPDYLFEQIDAAVAVLEREILE |
Ga0334722_102752112 | 3300033233 | Sediment | MTKQELLNLLKLLSAIEGAIFTNTAQVPDHLFEQIGAAVAVLEREILE |
Ga0335020_0088094_539_694 | 3300034082 | Freshwater | MTKQELLKLLKLLSAIESAMSINRATLPDYLFGQIDAAVVVLEREILNDQR |
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