Metagenome Family F084970

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Overview

Basic Information
Family ID	F084970
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	52 residues
Representative Sequence	MCTNVALCETHRISYREWKEEDWSLRFAREGVQKARLLVLHVVFGPQRCPNVELY
Number of Associated Samples	49
Number of Associated Scaffolds	91

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	67.57 %
% of genes near scaffold ends (potentially truncated)	63.06 %
% of genes from short scaffolds (< 2000 bps)	96.40 %
Associated GOLD sequencing projects	32
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (99.099 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater (99.099 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (100.000 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72 1Ga0007850_10136732 2Ga0007850_10136733 3Ga0007835_10112601 4Ga0007835_10112602 5Ga0007865_10142911 6Ga0007840_10014351 7Ga0007840_10055012 8Ga0007864_10127771 9Ga0007864_10127774 10Ga0007869_10172133 11Ga0007879_10285291 12Ga0007878_10118381 13Ga0007875_10354521 14Ga0007880_10214982 15Ga0007880_10214983 16Ga0007880_10271392 17Ga0007804_10535951 18Ga0007804_10592502 19Ga0007804_10717262 20Ga0007804_10791852 21Ga0007804_11192073 22Ga0007804_11528211 23Ga0007804_11664071 24Ga0007791_100742112 25Ga0007854_101065223 26Ga0007854_104001563 27Ga0007809_100353473 28Ga0007809_100353475 29Ga0007809_101011432 30Ga0007876_11089821 31Ga0007876_11614191 32Ga0007876_11710481 33Ga0007881_10439793 34Ga0007881_10439794 35Ga0007881_10439795 36Ga0007881_10621863 37Ga0007881_10944012 38Ga0007881_11506761 39Ga0007806_10440571 40Ga0007806_10600542 41Ga0007806_10600543 42Ga0007806_10600544 43Ga0007806_10600545 44Ga0007806_11049641 45Ga0007882_102547031 46Ga0007836_10869002 47Ga0007836_11131631 48Ga0007836_11290702 49Ga0007836_11471901 50Ga0007836_11471902 51Ga0007836_11471903 52Ga0007816_10737441 53Ga0007816_10762211 54Ga0007816_11384002 55Ga0007816_11384601 56Ga0007859_11189191 57Ga0007867_11335821 58Ga0007824_10531211 59Ga0007852_10363363 60Ga0007852_10363364 61Ga0007852_10887882 62Ga0007852_11218081 63Ga0007852_11279602 64Ga0007825_10503751 65Ga0007825_10503752 66Ga0007805_11000621 67Ga0007805_11225941 68Ga0007828_11017791 69Ga0007828_11173101 70Ga0007834_10659232 71Ga0007834_10659233 72Ga0007834_10699921 73Ga0007834_11322982 74Ga0114964_104134561 75Ga0208502_10168622 76Ga0208383_10389812 77Ga0208504_10417201 78Ga0208738_10354961 79Ga0208738_10354962 80Ga0208738_10565701 81Ga0208250_10538981 82Ga0208107_10058451 83Ga0208107_10396611 84Ga0208107_10396612 85Ga0208107_10756121 86Ga0208387_10473642 87Ga0208745_10005821 88Ga0208745_10650101 89Ga0208378_10309061 90Ga0208378_10405101 91Ga0208875_10303531 92Ga0208875_10353051 93Ga0208868_10403341 94Ga0208868_10498401 95Ga0208877_10160201 96Ga0208877_10551501 97Ga0208617_10676601 98Ga0208617_10762941 99Ga0208742_10664511 100Ga0208742_10664512 101Ga0208742_10850551 102Ga0208497_10292012 103Ga0208497_10862471 104Ga0208260_10113872 105Ga0208260_10113873 106Ga0208260_10113874 107Ga0208864_10891141 108Ga0208379_10346641 109Ga0208379_10639431 110Ga0208507_11571041 111Ga0208386_10467661
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72 1Ga0007850_10136732 2Ga0007865_10142911 3Ga0007840_10014351 4Ga0007804_10717262 5Ga0007804_10791852 6Ga0007834_10699921
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72 1Ga0007850_10136732 2Ga0007865_10142911 3Ga0007840_10014351 4Ga0007804_10717262 5Ga0007804_10791852 6Ga0007834_10699921
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.00% β-sheet: 36.36% Coil/Unstructured: 43.64%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	0.90 %
Unclassified	root	N/A	99.10 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	0.90 %
Unclassified	root	N/A	99.10 %

Name	Rank	Taxonomy	Distribution
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.90 %
Unclassified	root	N/A	99.10 %

Name	Rank	Taxonomy	Distribution
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.90 %
Unclassified	root	N/A	99.10 %

Name	Rank	Taxonomy	Distribution
Stramenopiles	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles	0.90 %
Unclassified	root	N/A	99.10 %

Name	Rank	Taxonomy	Distribution
Ochrophyta	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta	0.90 %
Unclassified	root	N/A	99.10 %

Name	Rank	Taxonomy	Distribution
Chrysophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Chrysophyceae	0.90 %
Unclassified	root	N/A	99.10 %

Name	Rank	Taxonomy	Distribution
Chromulinales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Chrysophyceae → Chromulinales	0.90 %
Unclassified	root	N/A	99.10 %

Name	Rank	Taxonomy	Distribution
Chromulinaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Chrysophyceae → Chromulinales → Chromulinaceae	0.90 %
Unclassified	root	N/A	99.10 %

Name	Rank	Taxonomy	Distribution
Spumella	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Chrysophyceae → Chromulinales → Chromulinaceae → Spumella	0.90 %
Unclassified	root	N/A	99.10 %

Name	Rank	Taxonomy	Distribution
Spumella elongata	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Chrysophyceae → Chromulinales → Chromulinaceae → Spumella → Spumella elongata	0.90 %
Unclassified	root	N/A	99.10 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003783\|Ga0007850_1013673	Not Available	625	Open in IMG/M
3300003783\|Ga0007850_1013673	Not Available	625	Open in IMG/M
3300003789\|Ga0007835_1011260	Not Available	787	Open in IMG/M
3300003789\|Ga0007835_1011260	Not Available	787	Open in IMG/M
3300003796\|Ga0007865_1014291	Not Available	769	Open in IMG/M
3300003802\|Ga0007840_1001435	Not Available	1497	Open in IMG/M
3300003802\|Ga0007840_1005501	Not Available	777	Open in IMG/M
3300003806\|Ga0007864_1012777	Not Available	635	Open in IMG/M
3300003806\|Ga0007864_1012777	Not Available	635	Open in IMG/M
3300003809\|Ga0007869_1017213	Not Available	661	Open in IMG/M

Showing 1 to 10 of 111 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	100.00%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	0.90%
Lentic	Environmental → Aquatic → Freshwater → Lentic	99.10%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	99.10%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	99.10%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.90%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003783	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH05Oct08	Environmental	Open in IMG/M
3300003789	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE28Sep08	Environmental	Open in IMG/M
3300003796	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jul09	Environmental	Open in IMG/M
3300003802	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29Oct07	Environmental	Open in IMG/M
3300003806	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH16Oct07	Environmental	Open in IMG/M
3300003809	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH03Jun09	Environmental	Open in IMG/M
3300003813	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH15Jun09	Environmental	Open in IMG/M
3300003819	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH23Jun09	Environmental	Open in IMG/M
3300003823	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Aug09	Environmental	Open in IMG/M
3300003827	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH29Jun09	Environmental	Open in IMG/M

Showing 1 to 10 of 49 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0007850_10136732	3300003783	Freshwater	MSTNVALCETHRISYREWKEEDWSLRFAREGVQKARLLVLHVVFGPQRCPNVELY*
Ga0007850_10136733	3300003783	Freshwater	MCTNVALCETHRISYREWKEEDWSLRXAREGVQKXRLLVLHVVFGPQRCPNVELH*
Ga0007835_10112601	3300003789	Freshwater	MXTNVALCETHRISYREWKEEDXXLRFAREGVQKARLLVLHVVFGPQRCP
Ga0007835_10112602	3300003789	Freshwater	MYTNVALCETHKISYREWKEEDWSLIFAREGVQKARLLVLHVVFGPQRCPNVELY*
Ga0007865_10142911	3300003796	Freshwater	TSYREWKEVDWLLRFAREGVQNARLLVLHVVFGPYCCPTVELY*
Ga0007840_10014351	3300003802	Freshwater	MCTNVALCETHRISYREWKEEDWLLRFAREGVQKARLLVLH
Ga0007840_10055012	3300003802	Freshwater	MCTNVALCETHRISYREWKEEDWLLRFAREGVQKARWLVLRVVFGPQRCPNVELY*
Ga0007864_10127771	3300003806	Freshwater	MCTNVALCETHRISYREWKEEDWLLRFAREGVQKARLLVLHV
Ga0007864_10127774	3300003806	Freshwater	VALCETHRICYREWKEEDWLLRFARDGVQNARLLVLHVVFGPQRCPNVELY*
Ga0007869_10172133	3300003809	Freshwater	MCTNVALCETHRISYREWKEEDWSLRFALEGVQKARLLVLXVVFGPQRCPNVELY*
Ga0007879_10285291	3300003813	Freshwater	MSKCRVILKSMCTNVALCETHRISYREWKEEDWSLIFVLEAVQKARLLVLHVVFGPQRCPNFELY*
Ga0007878_10118381	3300003819	Freshwater	MCTNVALCETHRISYREWKEEDWXLRXAREGVQKARLLVLXVVFGPQRCPNVELY*
Ga0007875_10354521	3300003823	Freshwater	NVALSETHRISYREWKEEDWLLRFAREGVQNARLFVLHVVFGPQRCPNVELY*
Ga0007880_10214982	3300003827	Freshwater	MCTNVALCETHRISYREWKEEDWSLRFAREGVQKARLLVLHVVXGPQRCPNVELY*
Ga0007880_10214983	3300003827	Freshwater	MSTNVALCETHRISYREWKEEDRSLRFAREGVQKARLLVLHVVFGPQRCPNVE
Ga0007880_10271392	3300003827	Freshwater	MCTNVALCETHRISYREWKEEDWLLRFAREGVQKARLLVLHVV
Ga0007804_10535951	3300004770	Freshwater	MCTNVALCETHRISYREWKEEDWLLRFAREGVQKARLLVLRVVFGPQRCP
Ga0007804_10592502	3300004770	Freshwater	MYTSVALCETHRISYREWKEEDWSLRFAREGVQKIRFLLLHVVVFGPQRCPNIELY*
Ga0007804_10717262	3300004770	Freshwater	LFKCPVIRKSMYTNVVLCETHRISYREWKEEDWSLRFAREGVQKARLLVLHVVFGP
Ga0007804_10791852	3300004770	Freshwater	ISYREWKEEDWSLRFAREGVQNKPFFVLHVIFGPQRCSNVELY*
Ga0007804_11192073	3300004770	Freshwater	MFTNVALCETHPISYRDWKEEDWSLRFAREGVQNKRFLVLHVIFGPQRCPNVELY*
Ga0007804_11528211	3300004770	Freshwater	MYTSVALCETHRISYREWKEEDWSLRFAREGVQNARLLVLHVVFGPQRCSNVELY*
Ga0007804_11664071	3300004770	Freshwater	ETHRISYREWKEEDWSLRFVREGVQKIRVLLLHVVVFGPQRCPNIELY*
Ga0007791_100742112	3300004772	Freshwater	MCTNVALCETHRISYREWKEEDWSLRFAREGVQKARLLVLHVVFG
Ga0007854_101065223	3300004806	Freshwater	MSTNVALCETHRISYREWKEEDWLLRFAREGVQKARLLVLHVV
Ga0007854_104001563	3300004806	Freshwater	ALCETHRISYREWKEEDWSLRFAREGVQNKRGLVLHVVFGPQRCPNFELY*
Ga0007809_100353473	3300004807	Freshwater	MCTNVALCETHRISYREWKEEDWLLRFAREGVQKARWLVLHVVFGPQRCPNVELY*
Ga0007809_100353475	3300004807	Freshwater	MSTNVALCETHRISYREWKEEDRSLRFAREGVQKARLLVLHVVFGPQRCPNVELY*
Ga0007809_101011432	3300004807	Freshwater	MCTNVALCETHRISYREWKEEDWLLRFAREGVQKARLLVLRVVFGPQRCPNVELY*
Ga0007876_11089821	3300006071	Freshwater	LCETHRISYREWKEEDWSLRFAREGVQNKRFLLVHVVFGPQRCSNVELY*
Ga0007876_11614191	3300006071	Freshwater	RVILKSMCTNVALCETHRISYREWKEEDWSLRFAIEGVQKARLLVLHVVF*
Ga0007876_11710481	3300006071	Freshwater	MCTNVALCETHRISYREWKEEDWLLRFAREGVQKARLLVL
Ga0007881_10439793	3300006072	Freshwater	MYANVALCETHRISYREWKEEDWSLRFAREGVQNKRFLLLHVVFGPQRCSNVELY*
Ga0007881_10439794	3300006072	Freshwater	MYTSVALCETHRISYREWKEEDWSLRFAREGVQNKRFLLLHVVVFGPQRCSNVELY*
Ga0007881_10439795	3300006072	Freshwater	MYTNVALCETHRISYREWKEEDWSLRFARKGVQNKRFLVLHVIFGPQRCSNVKLY*
Ga0007881_10621863	3300006072	Freshwater	MCTNVALCETHRISYREWKEEDWLLRFAREGVQKARWLVL
Ga0007881_10944012	3300006072	Freshwater	MCTIVALSETHRISYREWKEKDWLLRFAREEGVRKARLLVLHVVFGPQRCPNVELY*
Ga0007881_11506761	3300006072	Freshwater	HRISYREWKEEDWSLRFALEGVQKARLLVLHDVFAPQCCPNVELY*
Ga0007806_10440571	3300006100	Freshwater	MCTNVALCETHRISYREWKEEDWSLRFAREGVQKARLFVLHVVFGPQRCPNVELY*
Ga0007806_10600542	3300006100	Freshwater	MSTNVALCETQRISYREWKEEDWLLRFAREGVQKARLLVLHVVFGPQRCPNVELY*
Ga0007806_10600543	3300006100	Freshwater	MCTNGALCETQRISYREWKEEDWSLRFAREGVQKARLLVLHVVFGPQRCPNVELY*
Ga0007806_10600544	3300006100	Freshwater	MSTNVALCETHRISYREWKEEDWLLRFAREGVQKARLLVLHVVFGPQRCPNVELY*
Ga0007806_10600545	3300006100	Freshwater	MRTNVALCETHRISYREWKEEDWLLRFAREGVQKARL
Ga0007806_11049641	3300006100	Freshwater	VALCETHRISYREWKEEDWSLRFAREGVQNARFFLVHVVFGPQRCSNVELY*
Ga0007882_102547031	3300006104	Freshwater	VILKSMYTNVALCETHRISYREWKEEDWSLRFAREGVQNALFLLVYVVFGP*
Ga0007836_10869002	3300006107	Freshwater	TNVALCETHRISYCQWKEEDWSLRFAREGVQKAHLLVLHVVFGPQRCPNVE*
Ga0007836_11131631	3300006107	Freshwater	MCTIVALSETHRISYREWKEKDWLLRFAREGVQKARLLVLHVVFGPQRCPNVELY*
Ga0007836_11290702	3300006107	Freshwater	MYTNVALCETHRISFREWKEEDWSLRFAREGVQNKRFLLLHVIFGPLRCSNVE
Ga0007836_11471901	3300006107	Freshwater	MCTIVALCKTHRICYREWKEEDWLLRFARDGVQNARLLVLHVVFGPQR
Ga0007836_11471902	3300006107	Freshwater	MCTIVALSETHRISYREWKEEDWLLRFAREGVQNARLFVLHVVFGPQRCPNVELY*
Ga0007836_11471903	3300006107	Freshwater	LKSICTNVALSETHRISYREWKEEDWLLRFAREGVQKARLFVLHVVFRPQRCPNVELY*
Ga0007816_10737441	3300006115	Freshwater	MCTNVALCETHRISYREWKEEDRSLRFAREGVQKARLLVL
Ga0007816_10762211	3300006115	Freshwater	MYTNVALCQTHRISYREWKEEDWSLRFAREGVQKNRGLELHVELGPQRCSNVELY*
Ga0007816_11384002	3300006115	Freshwater	NVALCETHRISYREWKEEDWSLRFAREGVRNARFLLLHVVLGPQRCSNVELY*
Ga0007816_11384601	3300006115	Freshwater	MSTNVALCETHRISYCEWKEEDRSLRFAREGVQKARLLVLHVVFGPQRCPNVE
Ga0007859_11189191	3300006118	Freshwater	MSTNVALCETHRISYREWKEEDRSLRFAREGVQKARLLVLHVV
Ga0007867_11335821	3300006120	Freshwater	MCTIVALSETHRISYREWKEKDWLLRFAREEGVQKARLLVLHVVFGPQRCPNVELY*
Ga0007824_10531211	3300006121	Freshwater	MCTIVALSETHRISYREWKEKDWLLRFAREGVQKARLLVLHVVFGPQRCPNVEL
Ga0007852_10363363	3300006123	Freshwater	MCTIVALCKTHRICYREWKEEDWLLRFARDGVQNARLLVLHVVFGPQRCPNVELY*
Ga0007852_10363364	3300006123	Freshwater	MCTIVALSETHRISYREWKEEGWSLRFARDGVQNARLFVLHVVFGPQRCPNVELY*
Ga0007852_10887882	3300006123	Freshwater	FKCRVILKSMCTNVVLCETHRISYREWKEEDWSQRFAREGVQNARLLVLHVVFGP*
Ga0007852_11218081	3300006123	Freshwater	LKSICTNVALSETHRISYREWKEEDWLLRFARECVQNARLFVLHVVFRPQRCPNVELY*
Ga0007852_11279602	3300006123	Freshwater	CRVILKSMYTNVALCETHRISYREWKEEDWSLRFAREGVQNARLLLLHVVFGPQRCSNVELY*
Ga0007825_10503751	3300006125	Freshwater	ETHRISYREWKEEDWLLRFAREGVQNARLFVLHVVFGPQRCPNVELY*
Ga0007825_10503752	3300006125	Freshwater	MCTIVALSETHRISYREWKEKDWLLRFAREGVQKARLLVLHVVFGPQRCPNVGYTEIDVY
Ga0007805_11000621	3300006127	Freshwater	TNVALCETHRISYREWKEEDWSLRFAREGVQNKRFLVLHVIFGPQRCPNVELY*
Ga0007805_11225941	3300006127	Freshwater	HRISYREWKEEDWSLRFAREGVQNARLLVLHVVFGPQRCSNVELY*
Ga0007828_11017791	3300006128	Freshwater	MCTNVALCETQRISYREWKEEDWLLRFAREGVQKARWLVLRVVFGPQRCPNVELY*
Ga0007828_11173101	3300006128	Freshwater	MCTNVALSETHRISYREWKEEDWLLRFAREGVQKARLFVLHVVF
Ga0007834_10659232	3300006129	Freshwater	MYTNVALCETHRISYREWKEEDWSLRFAREGVQKKRGLVLHVVFGPQRCQNVELY*
Ga0007834_10659233	3300006129	Freshwater	VALCETHRISYREWKEEDWSLRFAREGVQNKRFLVLHVVFGPQRCSNVELY*
Ga0007834_10699921	3300006129	Freshwater	RIESAIVSREEDWSLRFAREGVQNKRFLLLHVVFGPQRSPNVELY*
Ga0007834_11322982	3300006129	Freshwater	RVILKSMYTNVALCETHRISYREWKEEDWSLRFAREGVQKKRGLLLHVVFGPQRCSNVELY*
Ga0114964_104134561	3300010157	Freshwater Lake	MCTNVALCETHRISYLEWKEEDWSLRFAREGVQKARLLVLYVVFGPQRCPNVELY*
Ga0208502_10168622	3300025339	Freshwater	TNVALCETHRISYREWKEEDWSLRFAREGVQKARLLVLHVVFGPQRCPNVELY
Ga0208383_10389812	3300025357	Freshwater	MCTNVALCETHRISYREWKEEDWSLRFAREGVQKARLLVLHVVFGPQRCPNVELY
Ga0208504_10417201	3300025358	Freshwater	MCTNVALCETHRISYREWKEEDWLLRFAREGVQKARLLVLRVVFGPQRCPNVELY
Ga0208738_10354961	3300025379	Freshwater	MSTNVALCETQRISYREWKEEDWLLRFAREGVQKARLLVLHVVFGPQRCPNVELY
Ga0208738_10354962	3300025379	Freshwater	CETHRISYREWKEEDWSLRFAREGVQKARLLVIHVVFGPQRCPNVELY
Ga0208738_10565701	3300025379	Freshwater	MYTNVALCETHRISYREWKEEDWSLRFAREGVQKARLLVLHVVFGPQRCPNVEL
Ga0208250_10538981	3300025383	Freshwater	TNVALCETHRISYREWKEEDWSLRFAREGVQKARLFVLHVVFGPQRCPNVELY
Ga0208107_10058451	3300025399	Freshwater	MCTNVALCETHRISYREWKEEDWLLRFAREGVQKARWLVLRVVFGPQRCPNVELY
Ga0208107_10396611	3300025399	Freshwater	MCTIVALCKTHRICYREWKEEDWLLRFARDGVQNARLLVLHVVFGPQRCPNVELY
Ga0208107_10396612	3300025399	Freshwater	MCTIVALSETHRISYREWKEEDWLLRFAREGVQNARLFVLHVVFGPQRCPNVELY
Ga0208107_10756121	3300025399	Freshwater	MCTNVALCETHRISYREWKEEDWSLRFAIEGVQKARLLVLH
Ga0208387_10473642	3300025400	Freshwater	MYTNVALCETHRISYREWKEEDWSLRFAREGVQKARLLVLHVVFGPQRCPNVELY
Ga0208745_10005821	3300025403	Freshwater	MSKCRVILKSMCTNVALCETHRISYREWKEEDWSLIFVLEAVQKARLLVLHVVFGPQRCPNFELY
Ga0208745_10650101	3300025403	Freshwater	TNVALCQTHRISYREWKEEDWSLRFAREGVQKKRGLVLHVVLGPQRCSNVELY
Ga0208378_10309061	3300025407	Freshwater	MCTNVALCETHRISYREWKEEDWLLRFAREGVQKARLL
Ga0208378_10405101	3300025407	Freshwater	MCTNVALCETHRISYREWKEEDWLLRFAREGVQKARLLVLRVVFGPQR
Ga0208875_10303531	3300025410	Freshwater	MCTNVALCETHRISYREWKEEDWLLRFAREGVQKARLLVLRVVFGPQRC
Ga0208875_10353051	3300025410	Freshwater	MSKCRVILKSMCTNVALCETHRISYREWKEEDWSLIFVLEAVQKARLLVLHVVFGPQ
Ga0208868_10403341	3300025415	Freshwater	MCTNVALCETHRISYREWKEEDWLLRFAREGVQKARLLVLRVV
Ga0208868_10498401	3300025415	Freshwater	MCTNVALCETHRISYREWKEEDWLLRFAREGVQKARLLV
Ga0208877_10160201	3300025416	Freshwater	KCRVILKSMCTNVALCETHRISYREWKEEDWSLRFAREGVQKARLLVLHVVFGPQRCPNVELY
Ga0208877_10551501	3300025416	Freshwater	MCTNVALCETHRISYREWKEEDWLLRCAREGVQKARLLVLHVVF
Ga0208617_10676601	3300025424	Freshwater	MCTNVALCETHRISYREWKEEDWLLRFAREGVQKAR
Ga0208617_10762941	3300025424	Freshwater	YTNVALCETHRISYREWKEEDWSLRFAREGVQKKRGLLLHVVFGPQRCSNVELY
Ga0208742_10664511	3300025437	Freshwater	MCTIVALSETHRISYREWKEKDWLLRFAREGVQKARLLVLHVVFGPQRCPNVE
Ga0208742_10664512	3300025437	Freshwater	MCTIVALCETHRISYRQWKEEDWSLRLAREGVQKARLLVLHVVFGPQRCPNVEL
Ga0208742_10850551	3300025437	Freshwater	RISYREWKEEDWLLRFAREGVQKARLFVLHVVFRPQRCPNVELY
Ga0208497_10292012	3300025466	Freshwater	MCTIVALSETHRISYREWKEEGWSLRFARDGVQNARLFVLHVVFGPQRCPNVELY
Ga0208497_10862471	3300025466	Freshwater	CRVILKSMSTNVALCETQRISYREWKEEDWLLRFAREGVQKARLLVLHVVFGPQRCPNVELY
Ga0208260_10113872	3300025467	Freshwater	MSTNVALCETHRISYREWKEEDWSLRFAREGVQKARLLVLHVVFGPQRCPNVELY
Ga0208260_10113873	3300025467	Freshwater	MSTNVALCETHRISYREWKEEDRSLRFAREGVQKARLLVLHVVFGPQRCPNVELY
Ga0208260_10113874	3300025467	Freshwater	MSTNVALCETHRISYREWKEEDWLLRFAREGVQKARLLVLHVVFGPQRCPNVELY
Ga0208864_10891141	3300025578	Freshwater	KSMCTNVALCETHRISYREWKEEDWSLRFAREGVQKARLLVLHVVFGPQRCPNVELY
Ga0208379_10346641	3300025598	Freshwater	MCTNVALCETHRISYREWKEEDWLLRFAREGVQKARLLVLRVVFGP
Ga0208379_10639431	3300025598	Freshwater	MCTNVALCETHRISYREWKEEDWLLRFAREGVQKARLLVLRVVF
Ga0208507_11571041	3300025648	Freshwater	MCTNVALCETHRISYREWKEEDWSLRFAREGVQKARLLVLHVVFGPQRCPNV
Ga0208386_10467661	3300025781	Freshwater	SKCRVILKSMCTNVALSETHRISYREWKEEDWLLRFAREGVQNARLFVLHVVFGPQRCPNVELY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F084970

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences