Metagenome / Metatranscriptome Family F084875

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084875
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	114 residues
Representative Sequence	SPTSITITSDASGYVSYDMQPHGLRFAKPVIVTQRLKNASVYGTPLALNSFCAYFSTDLLDLSGILKALEIETTTIFSGSTGQAEVETWQLNHFSRYMLASG
Number of Associated Samples	99
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.79 %
% of genes near scaffold ends (potentially truncated)	96.43 %
% of genes from short scaffolds (< 2000 bps)	86.61 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (33.036 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (36.607 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.85% β-sheet: 10.77% Coil/Unstructured: 75.38%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF13424	TPR_12	17.86
PF13374	TPR_10	4.46
PF13432	TPR_16	2.68
PF00791	ZU5	1.79
PF13414	TPR_11	0.89
PF01966	HD	0.89
PF02954	HTH_8	0.89
PF07719	TPR_2	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	98.21 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	0.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	98.21 %
Spirochaetia	class	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia	0.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	95.54 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	2.68 %
Leptospirales	order	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales	0.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	95.54 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	2.68 %
Leptospiraceae	family	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae	0.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	95.54 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2.68 %
Leptospira	genus	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → Leptospira	0.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	95.54 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	1.79 %
Leptospira wolbachii	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → Leptospira → Leptospira wolbachii	0.89 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	0.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	95.54 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1.79 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	0.89 %
Leptospira wolbachii	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → Leptospira → Leptospira wolbachii	0.89 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001334\|A2165W6_1057306	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2088	Open in IMG/M
3300001406\|JGI20187J14854_1000164	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	10065	Open in IMG/M
3300002915\|JGI25387J43893_1061670	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	547	Open in IMG/M
3300004156\|Ga0062589_102266517	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	557	Open in IMG/M
3300004479\|Ga0062595_101057421	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	704	Open in IMG/M
3300004803\|Ga0058862_10834353	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	515	Open in IMG/M
3300005181\|Ga0066678_11102287	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	511	Open in IMG/M
3300005295\|Ga0065707_10996046	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	540	Open in IMG/M
3300005439\|Ga0070711_101383874	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	612	Open in IMG/M
3300005468\|Ga0070707_101747029	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → Leptospira → Leptospira wolbachii	589	Open in IMG/M
3300005554\|Ga0066661_10454825	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	781	Open in IMG/M
3300005563\|Ga0068855_100893297	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	939	Open in IMG/M
3300005574\|Ga0066694_10410097	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	637	Open in IMG/M
3300005574\|Ga0066694_10419216	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	628	Open in IMG/M
3300005575\|Ga0066702_10938477	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	517	Open in IMG/M
3300005578\|Ga0068854_101786550	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	563	Open in IMG/M
3300005615\|Ga0070702_100638746	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	803	Open in IMG/M
3300005719\|Ga0068861_102069708	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	569	Open in IMG/M
3300006426\|Ga0075037_1660049	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	538	Open in IMG/M
3300006844\|Ga0075428_102444238	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	536	Open in IMG/M
3300006854\|Ga0075425_100151247	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2659	Open in IMG/M
3300006854\|Ga0075425_101953860	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	657	Open in IMG/M
3300007258\|Ga0099793_10276602	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	813	Open in IMG/M
3300007265\|Ga0099794_10545285	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	612	Open in IMG/M
3300007819\|Ga0104322_128420	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1487	Open in IMG/M
3300007819\|Ga0104322_135979	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1863	Open in IMG/M
3300009090\|Ga0099827_10927450	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	755	Open in IMG/M
3300009143\|Ga0099792_10188637	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1164	Open in IMG/M
3300009162\|Ga0075423_11711002	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	677	Open in IMG/M
3300009551\|Ga0105238_12194257	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	587	Open in IMG/M
3300010137\|Ga0126323_1060932	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	697	Open in IMG/M
3300010303\|Ga0134082_10406055	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	583	Open in IMG/M
3300010336\|Ga0134071_10636273	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	560	Open in IMG/M
3300010373\|Ga0134128_11728028	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	688	Open in IMG/M
3300010861\|Ga0126349_1222756	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	510	Open in IMG/M
3300011003\|Ga0138514_100139631	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	537	Open in IMG/M
3300011332\|Ga0126317_10290960	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	647	Open in IMG/M
3300012019\|Ga0120139_1029309	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1274	Open in IMG/M
3300012201\|Ga0137365_10231047	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1378	Open in IMG/M
3300012207\|Ga0137381_10246671	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1552	Open in IMG/M
3300012208\|Ga0137376_10005071	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	8630	Open in IMG/M
3300012208\|Ga0137376_10188875	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1781	Open in IMG/M
3300012211\|Ga0137377_11704959	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	552	Open in IMG/M
3300012212\|Ga0150985_109380447	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	785	Open in IMG/M
3300012212\|Ga0150985_109456045	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	715	Open in IMG/M
3300012357\|Ga0137384_10734570	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	801	Open in IMG/M
3300012469\|Ga0150984_119197987	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	738	Open in IMG/M
3300012582\|Ga0137358_10081112	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2184	Open in IMG/M
3300012685\|Ga0137397_11335908	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	508	Open in IMG/M
3300012918\|Ga0137396_11023849	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	596	Open in IMG/M
3300012958\|Ga0164299_10514422	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	799	Open in IMG/M
3300013100\|Ga0157373_10243935	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1270	Open in IMG/M
3300013104\|Ga0157370_11526558	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	600	Open in IMG/M
3300013764\|Ga0120111_1151119	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	530	Open in IMG/M
3300013831\|Ga0120126_1011606	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	740	Open in IMG/M
3300013832\|Ga0120132_1123352	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	557	Open in IMG/M
3300015080\|Ga0167639_1004116	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2167	Open in IMG/M
3300015197\|Ga0167638_1009166	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2337	Open in IMG/M
3300015245\|Ga0137409_10074868	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3171	Open in IMG/M
3300018051\|Ga0184620_10051446	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1159	Open in IMG/M
3300018075\|Ga0184632_10485259	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	508	Open in IMG/M
3300018431\|Ga0066655_10871949	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	614	Open in IMG/M
3300018433\|Ga0066667_12231391	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	510	Open in IMG/M
3300018468\|Ga0066662_12956336	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	505	Open in IMG/M
3300018482\|Ga0066669_10588145	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	974	Open in IMG/M
3300019883\|Ga0193725_1007770	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3067	Open in IMG/M
3300019885\|Ga0193747_1102248	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	693	Open in IMG/M
3300019887\|Ga0193729_1211065	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	652	Open in IMG/M
3300020001\|Ga0193731_1020850	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1713	Open in IMG/M
3300020006\|Ga0193735_1124395	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	697	Open in IMG/M
3300020010\|Ga0193749_1052561	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	779	Open in IMG/M
3300020015\|Ga0193734_1009473	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1818	Open in IMG/M
3300020062\|Ga0193724_1008469	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2193	Open in IMG/M
3300021078\|Ga0210381_10135790	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	825	Open in IMG/M
3300021078\|Ga0210381_10234999	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	648	Open in IMG/M
3300021078\|Ga0210381_10365510	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	529	Open in IMG/M
3300021363\|Ga0193699_10014865	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2812	Open in IMG/M
3300021363\|Ga0193699_10113690	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1100	Open in IMG/M
3300021418\|Ga0193695_1001953	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3620	Open in IMG/M
3300021418\|Ga0193695_1038777	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1029	Open in IMG/M
3300021510\|Ga0222621_1112556	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	578	Open in IMG/M
3300022756\|Ga0222622_11137557	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	574	Open in IMG/M
3300024178\|Ga0247694_1045062	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	501	Open in IMG/M
3300024279\|Ga0247692_1081196	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	510	Open in IMG/M
3300025885\|Ga0207653_10427243	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	520	Open in IMG/M
3300025906\|Ga0207699_10557935	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	831	Open in IMG/M
3300025906\|Ga0207699_11271838	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	545	Open in IMG/M
3300025910\|Ga0207684_10145641	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2037	Open in IMG/M
3300025916\|Ga0207663_10832506	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	736	Open in IMG/M
3300025944\|Ga0207661_10368587	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1298	Open in IMG/M
3300025981\|Ga0207640_11675256	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	574	Open in IMG/M
3300026041\|Ga0207639_10559495	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1051	Open in IMG/M
3300026320\|Ga0209131_1027881	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3330	Open in IMG/M
3300026322\|Ga0209687_1002110	All Organisms → cellular organisms → Bacteria	6704	Open in IMG/M
3300026530\|Ga0209807_1209204	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	677	Open in IMG/M
3300027681\|Ga0208991_1157888	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	668	Open in IMG/M
3300028717\|Ga0307298_10189706	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	604	Open in IMG/M
3300028718\|Ga0307307_10128974	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	783	Open in IMG/M
3300028784\|Ga0307282_10395270	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	669	Open in IMG/M
3300028824\|Ga0307310_10124636	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1168	Open in IMG/M
3300028828\|Ga0307312_10430165	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	868	Open in IMG/M
3300028885\|Ga0307304_10043306	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1638	Open in IMG/M
3300028885\|Ga0307304_10386573	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	630	Open in IMG/M
3300030904\|Ga0308198_1016807	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	946	Open in IMG/M
3300031093\|Ga0308197_10446574	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	517	Open in IMG/M
3300031097\|Ga0308188_1022978	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	608	Open in IMG/M
3300031098\|Ga0308191_1011133	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	813	Open in IMG/M
3300031114\|Ga0308187_10267300	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	628	Open in IMG/M
3300031114\|Ga0308187_10277408	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	620	Open in IMG/M
3300031720\|Ga0307469_12367311	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	518	Open in IMG/M
3300033412\|Ga0310810_10428750	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1350	Open in IMG/M
3300033412\|Ga0310810_11353382	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	552	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.71%
Host-Associated	Host-Associated	14.29%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.68%
Plants	Host-Associated → Plants	13.39%
Aquatic	Environmental → Aquatic	8.04%
Human	Host-Associated → Human	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.14%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.25%
Freshwater	Environmental → Aquatic → Freshwater	4.46%
Sediment	Environmental → Aquatic → Sediment	3.57%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.89%
Digestive System	Host-Associated → Human → Digestive System	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.96%
Loam	Environmental → Terrestrial → Soil → Loam	8.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.25%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.57%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.68%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.79%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.89%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.89%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.54%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.25%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	5.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.57%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.68%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.79%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.79%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.89%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.89%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	25.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.25%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.36%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	4.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.57%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.57%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.68%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.79%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.79%
Permafrost Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Permafrost Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.79%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.79%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.89%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.89%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.89%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.89%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001334	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A21-65cm)- 6 month illumina	Environmental	Open in IMG/M
3300001406	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 deep-072012	Environmental	Open in IMG/M
3300002915	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006426	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_054 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007819	Permafrost core soil microbial communities from Svalbard, Norway - sample 2-1-2 Soapdenovo	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010137	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010861	Boreal forest soil eukaryotic communities from Alaska, USA - C4-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013764	Permafrost microbial communities from Nunavut, Canada - A28_35cm_6M	Environmental	Open in IMG/M
3300013831	Permafrost microbial communities from Nunavut, Canada - A21_5cm_6M	Environmental	Open in IMG/M
3300013832	Permafrost microbial communities from Nunavut, Canada - A3_5cm_0M	Environmental	Open in IMG/M
3300015080	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6C, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300015197	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6B, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024178	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK35	Environmental	Open in IMG/M
3300024279	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030904	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031097	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_183 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031098	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_186 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A2165W6_10573061	3300001334	Permafrost	STYTSITITSDASGYVSYDMQPHGLRFAKPVIVTQRLRNTAVYGTPLALNSFCAYFSTDLLDLSGILKALEIETTTIFAAPTGDQLIPEVETWQLNHFSRYMLASG*
JGI20187J14854_10001649	3300001406	Arctic Peat Soil	PKGALSTYTSITITSDASGYVSYDMQPHGLRFAKAVIVTQRLRNTAVYGTPLALNSFCAYLSTDLLDLSGILKALEIETTTIFSAPNGNQLIPEVETWQLNHFSRYMLASG*
JGI25387J43893_10616702	3300002915	Grasslands Soil	YWGGTLTIPGSDFSIMFPQGAVTSSTYITITSDNSGYVSYDMKPHGIKFARPVIVTQRLGNTAVYGTPQALNAAGAYFPQDLLDLTGVLKALEIETTTIFSNSKGQPEVETWQINHFSRYMLASG*
Ga0062589_1022665172	3300004156	Soil	VLRIPGSDFSILFPKGALSSNTAITITSDASGFVSYDMKPHGLRFARPVIVTQSLRNTEVYGTERALNSFCAYFPDDLLNLDGILKALEIETTTIFSDPRSGQPEVQTWILNHFSRYILASG*
Ga0062595_1010574211	3300004479	Soil	LYEQTSIKITSDASGYVSYDMQPHGLRFNKPVVVTQRLRNTAVYGTPLALNSFCAYFSSDLLDLGGILKALEIETTTIFSGSDGNAEIQAWQINHFSRYMLASG*
Ga0058862_108343531	3300004803	Host-Associated	GALSQTTLITIVSDGVGYVSYDMKPHGLRFNKPVIVTQRLNNTAVFGTSLALKAAGAYFPQDPTDYSGTINALEIETTTIFSSKNDGNADVETWLLNHFSRYMLASG*
Ga0066678_111022871	3300005181	Soil	GALSQTTLITIVSDGTGYVSYDMKPHGLKFAKPVTVIQRLQNTAVYGTSLALKAAGAYFPQDPTDLSGTIKALEIETTTIFSSKNDGKADVETWSLNHFSRYMLASD*
Ga0065707_109960462	3300005295	Switchgrass Rhizosphere	SIPGSDFTITFPQGALSQSTAITIISDGSDYVSYDMRPHGLTFAKPVLVTQKLRNTSLYGSPDVWNSFGAYFPQDPTILSGVLKAVETTTTTIFAAPDGTEPAIHVWQLQHFSRYMLASG
Ga0070711_1013838742	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	IPGSDFTITFPKGALYETTWITITSDASGYVSYDMQPHGLKFAKPVIVMQRLDNTAVYKTPVALNAFCAYFSTDLLDLSGILNALEIETTTIFSAPNSGSLVPEVETWQLNHFSRYILASG*
Ga0070707_1017470291	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	FQTDPNGIPVTAVKWAPSHVNQTRSVSASIGYNGGSLAIPGSDFTITFPRGALYETTWITITSDASGYVSYDMKPHGLKFAKPVIVTQRLDNTAVYKTPVSLNAFCAYFSTDLLDLSGVLKALEIETTTIFSAPNSGSLVPEVETWQLNHFSRYMLASG*
Ga0066661_104548252	3300005554	Soil	FTITFPSGALSQTTLITIVSDGTGYVSYDMKPHGLTFAKPVTVTQRLQNTAVYGTSLALKAAGAYFPQDPTNLSGTIDALEIERTTIFSSKNDGKADVETWSLNHFSRYMLASD*
Ga0068855_1008932971	3300005563	Corn Rhizosphere	GGTLVLPSSDFTISFPAGALSTTTLITIVSDGNGYVSYDMKPHGLKFAVPVIVTQRLQNTGVYGTSLALKAAGEYFDKDPDLSGSLKALEIEKTTIFSSKNDGNADVEVWQLNHFSRYMLASG*
Ga0066694_104100972	3300005574	Soil	TIGVNGGSLAIPGSDFTITFPYGALSQPTSITIVSDNSGYVSYDMQPHGLTFAKPVVVTQRLKNTAVYGTPLALNAVCAYFATDLLDLGGILQALGIETTTIFSDPNTGQATVETWQLNHFSRYMLASD*
Ga0066694_104192162	3300005574	Soil	SQPTSITIVSDASGYVSYDMQPHGLRFNKHVIVTQRLRNTSVYGTPLALNAFCAYFADDPLNLAGLLQALEIETTTIFSNPNTGQADVETWQLNHFSRYMLASD*
Ga0066702_109384771	3300005575	Soil	DGTGYVSYDMRPHGLKFAKPVFVAQRLQNTAVYGTPLALTAAGAYFPEDPTDLNGTINALEIEMTTIFSSKNDGKADVETWLLNHFSRYMLASD*
Ga0068854_1017865501	3300005578	Corn Rhizosphere	PAGALSTTTLITIVSDGNGYVSYDMKPHGLKFAVPVIVTQRLQNTGVYGTSLALKAAGAYFDKDPDLSGSLKALEIEKTTIFSSKNDGNADVEVWQLNHFSRYMLASG*
Ga0070702_1006387462	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	IPGSDFTITFPRGALYEQTSIKITSDASGYVSYDMQPHGLRFNKPVVVTQRLRNTAVYGTPLALNSFCAYFSSDLLDLGGILKALEIETTTIFSGSDGNAEIQAWQINHFSRYMLASG*
Ga0068861_1020697082	3300005719	Switchgrass Rhizosphere	SDFTITFPYGALSQSTNITITSDASGYVSYDMQPHGLTFRKPVIVTQKLNNTAVYGTPLALNSFCAYFAKDLLDLSGILKALEIETTTIFSNPNSGQVEVETWQLNHLSRYMLASG*
Ga0075037_16600491	3300006426	Permafrost Soil	PKGALSSSTAITITSDATGYVSYDMQPHGLRFAKPVIVTQGLRDTEVYGTDRALNSFCAYFPNDLLSLDGILKALEIETTTIFSGSHGQPEVQTWMLNHFSRYMLASG*
Ga0075428_1024442381	3300006844	Populus Rhizosphere	TSDASGYVSYDMQPHGLTFRKPVIVTQKLQNTAVYGTPVALNAFCAYFANDLLDLGGLLKALEIETTTIFSGPSGAPEVETWQLNHFSRYMLASG*
Ga0075425_1001512471	3300006854	Populus Rhizosphere	QTTLITVVSDGDGYVAYDMRPHGLRFNKPVLVTQRLNNTAVYGTSLALKAAGAYFPQDPTDYSGTINALEIETTTIFSSKNDGKADVETWLLNHFSRYMLASD*
Ga0075425_1019538602	3300006854	Populus Rhizosphere	ALPSSDFTITFPSGALSQTTLITIVSDGTGYVSYDMKPHGLKFAKPVVVTQRLQNTAVYGTSLALKAAGAYFPQEPTDYSGTINALEIETTTIFSSQNDGKADVETWLLNHFSRYMLASD
Ga0099793_102766022	3300007258	Vadose Zone Soil	TITSDASGYVSYDMQPHGLKFAKPVIVTQSLKNTAVYLTPTALKAAGAYFSKDLLDLSGTLKALEIETTTIYSAPNSQQLVPAVETWQLNHFSRYMLASG*
Ga0099794_105452851	3300007265	Vadose Zone Soil	PTHVNQTRSVSGTIGYNGGSLAIGGSDFTITFPKGALTTSTWITITSDASGYVSYDMKPHGLRFAKPVVVTQSLRNTAVYNTPTALKAACAYFSQDPLNLSGVLKALEIETTTIYSAPNSTNLLPAIETWQLNHFSRYMLASG*
Ga0104322_1284201	3300007819	Permafrost Soil	VSDGNDYVSYDMQPHGITFAVPVIVTQRLNHTSVYGTSKAWNAFGAYFPQDPSLLDGVLEALEIETTTIFAGSDGQPAVETWQLRHFSRYMLSSG*
Ga0104322_1359793	3300007819	Permafrost Soil	SIGYYGGSLSIPGSDFTIVFPRGALSTTTWISITSDASGYVSYDMQPHGLKFATPVIVTQRLNNTAVYGTPVAYNAFCAYFSTDLLDLSGILKALEIETTTIFSAPNAGSLVPEVETWQLNHFSRYMLASG*
Ga0099827_109274501	3300009090	Vadose Zone Soil	IPVTAIKWAPTHVNQVRSVSGTIGYNGGSLAIGASDFTITFPKGALTTSTWITIISDASGYVSYDMQPHGLKFAKPVIVTQSLKNTAVYLTPAALNAACAYFSKDLLDLSGVLKALEIETTTIYSAPNSTNLVPTVETWQLNHFSRYMLASG*
Ga0099792_101886371	3300009143	Vadose Zone Soil	TASAYIGQNGGSLAIPGSDFTITFPSGALSQTTFISITSDGTGYVSYDMKPHGLRFARPVIVTQRLQNTSVYGTSLALKAAGAYFPQDPTNLSGTINALEIEATTIFSSKNDGKADVETWFLNHFSRYMLASD*
Ga0075423_117110022	3300009162	Populus Rhizosphere	LSQTTLITIVSDGTGYVSYDMKPHGLKFAKPVVVTQRLQNTAVYGTSLALKAAGAYFPQEPTDYSGTINALEIETTTIFSSQNDGKADVETWLLNHFSRYMLASD*
Ga0105238_121942572	3300009551	Corn Rhizosphere	SYDMQPHGIKFARPVIVTQRLTNTSVYGTPKALNAFGAYFATDPTLLSGLLKALEIETTTIFAGPSGQAEVETWQLNHFSRYMLASG*
Ga0126323_10609321	3300010137	Soil	AITIVSDGNGYVSYDMRPHGLRFNKPVLVTQSLRNTEVYGTPLALNSFCAYFAHDLLDLGGILQALEIETTTIFSNPRSGQAEVQVWQLNHFSRYMLASD*
Ga0134082_104060551	3300010303	Grasslands Soil	DNSGYVSYDMQPHGLTFAKPVVVTQRLKNTAVYGTPLALNAVCAYFATDLLDLGGILQALEIETTTIFSDPNTGQATVETWQLNHFSRYMLASD*
Ga0134071_106362732	3300010336	Grasslands Soil	YVSYDMQPHGLVFKKPVIVTQRLKNTSVYGTPIALNAFGAYFATDPLDLSGLLKALEIETTTIFSGSSGLPEVETWSLNHFSRYMLASG*
Ga0134128_117280282	3300010373	Terrestrial Soil	YVSYDMQPHGIKFARPVIVTQRLTNTSVYGTPKALNAFGAYFATDPTLLSGLLKALEIETTTIFAGPSGQAEVETWQLNHFSRYMLASG*
Ga0126349_12227562	3300010861	Boreal Forest Soil	FPKGALTTSTWITISSDASGYVSYDMQPHGLRFAKPVIVTQSLKNTAVYKTPVALNAACAYFSKDLLDLSGVLKALEIETTTIYSAPNGSQLVPEVETWQLNHFSHYMLASG*
Ga0138514_1001396312	3300011003	Soil	PYGALAAPTAITIISDGSGYVSYDMQPHGITFAKPVIVTQRLRNTSVYGTSDAWKAVGAYFPKDPLDLSGILKALETTTTTIFNGGSGDQPEVETWQLRHFSRYMLASG*
Ga0126317_102909601	3300011332	Soil	TIGYDGGTLQIPGSDFTITFPRGALYQSTSITIVSDASGYVTYDMQPHGLRFNKPVFVTQRLRNTEVYGTPLALNTFCAYFAQDLLDLDGLLQALEIETTTIFSDPRSGQAEVQVWQLNHFSRYMLASD*
Ga0120139_10293091	3300012019	Permafrost	HVNQVRSVSGTIGYNGGSLAIGGSDFTITFPKGALTTSTWITVTSDASGYVSYDMKPHGLRFAKPVIVTQGLKNTAVYGTPVAFKAAGAYFSKDLLDLSGILKALEIETTTIYSAPNGSQLLPAVETWQLNHFSHYMLASG*
Ga0137365_102310472	3300012201	Vadose Zone Soil	MTSDASGYVSYDMQPHGLVFKKPVIVTQRLKNTSVYGTPMALNAFGAYFATDPLDLSGLLKALEIETTTIFSGSSGLPEVETWSLNHFSRYMLASG*
Ga0137381_102466711	3300012207	Vadose Zone Soil	KWAPTHVNAVRTVSATIGVNGGSLSIPGSDFTIAFPYGALSAPTTISITSDASGYVSYDMQPHGLAFKKPVIVTQRLKNTSVYGTPMALNAFGAYFATDPLDLSGLLKALEIETTTIFSGSSGLPEVETWSLNHFSRYMLASG*
Ga0137376_100050718	3300012208	Vadose Zone Soil	SVSGYIGYVGGTLAIPGSDFSITFPRGALSTTTKITIISDGSGYVSYDMYPHGITFSTPVIVTQQLRNTSVYGTSKAWNSFGAYFPQDLLDLSGLLKASETTTTTIYGAPSQSQPAIQTWELKHFSRYMLASG*
Ga0137376_101888751	3300012208	Vadose Zone Soil	TIISDGSGYVSYDMRPHGITFAKPVIVTQRLRNTSVYGTSDAWKAVGAYFPKDPLDLSGILKALETTTTTIFNGGSGGQPEIETWQLRHFSRYMLASG*
Ga0137377_117049592	3300012211	Vadose Zone Soil	PSGALSQTTLITIVSDGTGYVSYDMKPHGLKFAKPVIVTQRLQNTAVYGTSLALKAAGAYFPQDPTDLSGTIQALEIETTTIFSSKNDGKADVETWSLNHFSRYMLASD*
Ga0150985_1093804471	3300012212	Avena Fatua Rhizosphere	YVSYDMQPHGLRFNKPVLVTQSLRNTQVYGTPLALNSFCAYFAHDLLDLGGILQALEIETTTIFSNPRSGQAEVQVWQLNHFSRYMLASD*
Ga0150985_1094560451	3300012212	Avena Fatua Rhizosphere	ITSDANGYVTYDMQPHGIRFARPVLVTQRLRNTSVYGTPAAFNAFGAYFSHDLLDLNGILKALEIEAATIFSGSSGQPEVETWIINHFSRYMLASG*
Ga0137384_107345702	3300012357	Vadose Zone Soil	ASGYVSYDMQPHGLTFNKPVVVTQRLKNTAVYGTPLALNSFCAYFATDLLDLSGILEALEIETTTIFANPTTGLPDVETWQLNHFSRYMLASG*
Ga0150984_1191979871	3300012469	Avena Fatua Rhizosphere	PGSDFTITFPYGALSRPTAIKITSDGNGYVSYDMQPHGLRFAKPVIVTQRLRNTSVYGTPLALNSFCAYFSTDLLDLGGILKALEIETTTILSGSSGNAEIEAWQINHFSRYMLASG*
Ga0137358_100811123	3300012582	Vadose Zone Soil	DFTITFPKGALTTSTWITITSDASGYVSYDMQPHGLKFAKPVIVTQSLKNTAVYLTPTALKAAGAYFSKDLLDLSGTLKALEIETTTIYSAPNSQQLVPAVETWQLNHFSRYMLASG*
Ga0137397_113359081	3300012685	Vadose Zone Soil	NQTRSVSGTIGYNGGSLALGGSDFTITFPKGALTTSTWITITSDASGYVSYDMKPHGLRFAKPVIVTQSLKNTAVYKTPVALNAACAYFPKDLLNLSGVLKALEIETTTIYSAPTSGQQNGQYQLVPEVETWQLNHFSRYMLASG*
Ga0137396_110238491	3300012918	Vadose Zone Soil	DMKPHGIKFAKPVLVTQRLQNTAVYKTPTALKSFGAYFPQDPTLLGGILKALEIEKTTIFSGTTAGQAEVQVWELRHFSRYMLASD*
Ga0164299_105144221	3300012958	Soil	SPTSITITSDASGYVSYDMQPHGLRFAKPVIVTQRLKNASVYGTPLALNSFCAYFSTDLLDLSGILKALEIETTTIFSGSTGQAEVETWQLNHFSRYMLASG*
Ga0157373_102439351	3300013100	Corn Rhizosphere	DFTITFPYGALSQSTNITITSDASGYVSYDMQPHGLTFRKPVIVTQKLNNTAVYGTPLALNSFCAYFAKDLLDLSGILKALEIETTTIFSNPNSGQVEVETWQLNHFSRYMLASG*
Ga0157370_115265581	3300013104	Corn Rhizosphere	ITSDASGYVSYDMKPHGLKFAKPVIVTQRLDNTAVYKTPVSLNAFCAYFSTERLDLSGVLKALEIETTTIFSAPNSGSLVPEVETWQLNHFSRYMLASG*
Ga0120111_11511191	3300013764	Permafrost	IPGSDFTITFPRGALYQSTWITITSDASGYVSYDMKPHGLTFAKPVIVTQRLNNTAVYKTPVALNSFCAYFSTDLLDLSGILEALEIETTTIFSAQNSGQLVPEVETWQLNHFSHYMLASG*
Ga0120126_10116062	3300013831	Permafrost	TFPQGALSTSTQITIVSDGSGYVSYDMQPHGIKFARPVIVTQRLTNTSVYGTPKALNAFGAYFATDPTLLGGILSALEIETTTIFAGPSGQAEVETWQLNHFSRYMLASG*
Ga0120132_11233521	3300013832	Permafrost	IKWGPTHYNQTRSVSASIDYNGGSLAIPGSDFTITFPKGALYETTWITITSDASGYVSYDMKPHGLKFAKPVIVTQRLNNTAVYKTPDALNAACAYFSTDLLDLSGILKALEIETTTIFSAPNSGSLVPEVETWQLNHFSRYMLASG*
Ga0167639_10041161	3300015080	Glacier Forefield Soil	VSYDMKPHGLRFAKPVVVTQRLRNTAVYGTPLALNSFCAYFSHDLLDLSGILKALEIETTTIFSAPNGNQQQPEVETWQLNHFSRYMLASG*
Ga0167638_10091661	3300015197	Glacier Forefield Soil	NGGTLAIPGSDFTITFPRGALSNSTAITITSDETGYVSYDMKPHGLRFAKPVVVTQRLRNTAVYGTPLALNSFCAYFSHDLLDLSGILKALEIETTTIFSAPNGNQQQPEVETWQLNHFSRYMLASG*
Ga0137409_100748683	3300015245	Vadose Zone Soil	MRTSITSDGTRYVSYDMKPHGLKFARPVLVTQRLQNTSVYGTSLALKAAGAYFPQDPQNLDGTIKALEIETTTIFSSKNDGQADVETWLLNHFSRYMLASD*
Ga0184620_100514461	3300018051	Groundwater Sediment	AITVTSDASGYVSYDMKPHGLTFYKPVIVTQRLQNTKVYGTSKALDSFCAYFDKDVKVLDGVLKALEIETTVIFGGSDGKAEVQTWQLNHFSRYMLASG
Ga0184632_104852591	3300018075	Groundwater Sediment	HVNQVRSVSGTIGYNGGTLAIPGSDFTIAFPKGALSTSTAITIISDASGYVSYDMRPHGLTFAKPVLVTQKLRNTTLYGTPEVWNSFGAYFPKDPTVLSGLLKAVETTTTTIFAAPDGTQPAIHVWQLKHFSRYMLASG
Ga0066655_108719492	3300018431	Grasslands Soil	MTFPYGALSQPTSITIVSDASGYVSYDMQPHGLRFNKHVIVTQRLRNTSVYGTPLALNAFCAYFADDPLNLSGLLQALEIETTTIFSNPNTGQADVETWQLNHFSRYMLASD
Ga0066667_122313911	3300018433	Grasslands Soil	GALSSPTSIKIISDASGYVSYDMQPHGLKFAKPVVVTQRLKNTAVYGTPTALTAAGAYFAKDPLDLTAILKALEIELTTIFAGPSGQAEVETWILNHFSRYMLASG
Ga0066662_129563361	3300018468	Grasslands Soil	DASGYVSYDMQPHGLTFNKPVVVTQRLDNTAVYGTPKALNSFGAYFAKDLLDLSGILSALEIETTTIFLNPRSGQPEVETWILNHFSRYMLASG
Ga0066669_105881451	3300018482	Grasslands Soil	TFPYGALSQPTSITIVSDNSGYVSYDMQPHGLTFAKPVVVTQRLKNTAVYGTPLALNAVCAYFATDLLDLGGILQALEIETTTIFSDPNTGQATVETWQLNHFSRYMLASD
Ga0193725_10077703	3300019883	Soil	VISFQSDPNGIPVTAIKWAPTHVNQTRSVSANIGYNGGSLALGASDFTITFPKGALTTSTWITITSDASGYVSYDMKPHGLRFAKPVIVTQSLKNTAVYKTPVALKAACAYFSKDLLDLSGVLKALEIETTTIYSAPNGSQLVPEVETWQLNHFSHYMLASG
Ga0193747_11022482	3300019885	Soil	AIPGSDFTIVFPKGALSNTTWISITSDGSGYVSYDMKPHGLKFAKPVIVTQRLNNTAVYGTPVAFNAFCAYFSKDLLDLGGILKALEIETTTIFSAPNTTNLPAVETWQLNHFSRYMLAS
Ga0193729_12110652	3300019887	Soil	DRLCVYDMQPHGLKFAKPVIVTQSLKNTAVYLTPAALNAAGAYFSKDLLDLSGTLKANEIETTTIYSAPNSTNLVPTVETWKLNHFSHYMLASG
Ga0193731_10208501	3300020001	Soil	GALTTSTWITITSDASGYVSYDMKPHGLRFAKPVIVTQGLKNTAVYGTPVAFNAAGAYFSKDLLDLSGVLKALEIETTTIYSAPNGSQLLPAVETWQLNHFSHYMLASG
Ga0193735_11243952	3300020006	Soil	IVFPKGALSNTTWISITSDGSGYVSYDMKPHGLKFAKPVIVTQRLNNTAVYGTPVAFNAFCAYFSKDLLDLGGILKALEIETTTIFSAPNTTNLPAVETWQLNHFSRYMLASG
Ga0193749_10525612	3300020010	Soil	TAIKWSSTHVNQTRSVSGTIGYNGGSLAIGGSDFTITFPKGALTTSTWITITSDATGYVSYDMQPHGLKFAKPVIVTQSLKNTAVYLTPAALNAAGAYFSKDLLDLSGTLKANEIETTTIYSAPNSTNLVPTVETWKLNHFSHYMLASG
Ga0193734_10094733	3300020015	Soil	TISIPGSDFTITFPYGALSAPTAITIISDGSGYVSYDMRPHGITFAKPVIVTQRLRNTSVYGTSDAWKAVGAYFPKDPLDLSGILKALETTTTTIFNGGSGGQPEIETWQLRHFSRYMLASG
Ga0193724_10084693	3300020062	Soil	TWITITSDASGYVSYDMKPHGLKFARPVIVTQRLNNTAVYKTPAALNAACAYFSTDLLNLSGILKALEIETTTIFSAPNSGSLVPEVETWQLNHFSRYMLASG
Ga0210381_101357901	3300021078	Groundwater Sediment	VSETIGYDGGSLEIPGSDFTITFPRGALRQSTAITVTSDASGYVTYDMKPHGLTFYKPVIVTQRLQNTKVYGTSKALESFCAYFDKDVNLLDGVLKALEIETTVIFGGSDGKAEVQTWQLNHFSRYMLASG
Ga0210381_102349991	3300021078	Groundwater Sediment	APTAITIISDGSGYVSYDMRPHGITFAKPVIVTQRLRNTSVYGTSDAWKAVGAYFPQDPLDLSGILKALETTTTTIFSGGSGGQPEIETWQLRHFSRYMLASG
Ga0210381_103655101	3300021078	Groundwater Sediment	LSIPGSDFTISFPQGALSQSTAVTIISDGSDYVSYDMRPHGLTFAKPVLVTQKLRNTSLYGTPDIWNSFGAYFPQDPTILSGLLKAVETTTTTIFAAPDGTAPAIHIWQLRHFSRYMLAS
Ga0193699_100148651	3300021363	Soil	YDMKPHGLTFYKPVIVTQRLQNTKVYGTSKALNSFCAYFDKDLTVLDGTLKALEIETTTIFGGSDGKAEVQTWQLNHFSRYMLASG
Ga0193699_101136902	3300021363	Soil	KWAGSHVNQVRTVSAIIGPGGGALTIPGSDFGIVFPAGALALSTPITIISDGSGYVSYDMLPHGLTFAKPVVVTQRLNNTEVYGTSRAWNSFGAYFPQDLLDLSGLLKALEIQTTTIFSGPSGRPEVETWQLRHFSRYMLSSG
Ga0193695_10019534	3300021418	Soil	KITSDGNGYVSYDMQPHGLTFAKPVVVTQRLKNTSVYGTPTALNAFGAYFPNDLLDLSGTIKALEIETTTIFSGSNGQAEVETWLLNHFSRYMLSSG
Ga0193695_10387771	3300021418	Soil	GSLALGASDFTITFPKGALTTSTWITITSDASGYVSYDMKPHGLRFAKPVIVTQSLKNTAVYKTPVALKAACAYFSKDLLDLSGVLKALEIETTTIYSAPNGSQLVPEVETWQLNHFSHYMLASG
Ga0222621_11125562	3300021510	Groundwater Sediment	AAPTAITIISDGSGYVSYDMRPHGITFAKPVIVTQRLRNTSVYGTSDAWKAVGAYFPKDPLDLSGILKALETTTTTIFSGGSGGQPEIETWQLRHFSRYMLASG
Ga0222622_111375572	3300022756	Groundwater Sediment	ISDGSGYVSYDMRPHGITFAKPVIVTQRLRNTSVYGTSDAWKAVGAYFPQDPLDLSGILKALETTTTTIFSGGSGGQPEIETWQLRHFSRYMLASG
Ga0247694_10450621	3300024178	Soil	HVNQTRSVSASIGYNGGSLAIPGSDFTITFPRGALYETTWITITSDASGYVSYDMKPHGLKFAKPVIVTQRLDNTAVYKTPVSLNAFCAYFSTDLLDLSGVLKALEIETTTIFSAPNSGALVPEVETWQLNHFSRYMLASG
Ga0247692_10811962	3300024279	Soil	LAIPGSDFTITFPRGALYETTWITITSDASGYVSYDMKPHGLKFAKPVIVTQRLDNTAVYKTPVSLNAFCAYFSTDLLDLSGVLKALEIETTTIFSAPNSGSLVPEVETWQLNHFSRYMLASG
Ga0207653_104272431	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	QRVGEVVSGTLALPSSDFTITFPSGALSQTTLITIVSDGVGYVSYDMKPHGLRFNKPVLVTQRLNNTAVYGTPLALKAAGAYFPQEPQDLTTTIKATEIETTTIFSSKNDGNADVETWLLNHFSRYMLASG
Ga0207699_105579352	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	YVAYDMQPHGLTFGKPVVVTQRLRNTAVYGTPLALNAFCAYFSKDLLDLSGLLNALEIETTTIFSDPRTGQAEVETWQLNHFSRYMLASN
Ga0207699_112718381	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VLKVIGFRSDPNGIPVSAIKWAPTHVNQTRSASASIGYNGGTLAIPGSDFTITFPKGALYETTWITITSDASGYVSYDMQPHGLKFAKPVIVTQRLKNTAVYGTPLAYNSFCAYFSTDLLSLSGILQALEIETTTIFSGSTGLPEVETWQLNHFSRYMLASD
Ga0207684_101456411	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VFYDMQPHGLKFAKPVIVTQSLKNTAVYLTPAALNAAGAYFPQDLLNLSGTLKALEIETTTIYSAPNSTDLVPTVETWQLNHFSRYMLASG
Ga0207663_108325062	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	AIPGSDFTITFPKGALYETTWITITSDASGYVSYDMQPHGLKFAKPVIVMQRLDNTAVYKTPVALNAFCAYFSTDLLDLSGILNALEIETTTIFSAPNSGSLVPEVETWQLNHFSRYILASG
Ga0207661_103685872	3300025944	Corn Rhizosphere	IKIVSDGSGYVSYDMQPHGIKFARPVIVTQRLTNTSVYGTPKALNAFGAYFATDPTLLSGLLKALEIETTTIFAGPSGQAEVETWQLNHFSRYMLASG
Ga0207640_116752561	3300025981	Corn Rhizosphere	TISFPAGALSTTTLITIVSDGNGYVSYDMKPHGLKFAVPVIVTQRLQNTGVYGTSLALKAAGAYFDKDPDLSGSLKALEIEKTTIFSSKNDGNADVEVWQLNHFSRYMLASG
Ga0207639_105594952	3300026041	Corn Rhizosphere	ITITSDASGYVSYDMKPHGLKFAKPVIVTQRLDNTAVYKTPVSLNAFCAYFSTDLLDLSGVLKALEIETTTIFSAPNSGALVPEVETWQLNHFSRYMLASG
Ga0209131_10278813	3300026320	Grasslands Soil	KGALTTSTWITITSDANGYVSYDMKPHGLRFAKPVVVTQSLRNTAVYNTPTALKAACAYFSQDPLNLSGVLKAVEIETTTIYSAPNSRQLVPEVETWQLNHFSHYMLASG
Ga0209687_10021101	3300026322	Soil	TLSIPGSDFTITFPYGALSQPTSITIVSDASGYVSYDMQPHGLRFNKQVIVTQRLRNTSVYGTPLALNAFCAYFADDPLNLSGILQALEIETTTIFSNPNTGQAEVETWQLNHFSRYMLASD
Ga0209807_12092042	3300026530	Soil	AIPGSDFTITFPYGALSQPTSITIVSDNSGYVSYDMQPHGLTFAKPVVVTQRLKNTAVYGTPLALNAVCAYFATDLLDLGGILQALEIETTTIFSDPNTGQATVETWQLNHFSRYMLASD
Ga0208991_11578882	3300027681	Forest Soil	SGYVSYDMKPHGLRFAKPVIVTQSLKHTAVYKTPVALNAACAYFSKDLLNLSGVLKALEIETTTIYSAPTNDQQNGQYQLVPEVETWQLNHFSRYMLASG
Ga0307298_101897061	3300028717	Soil	ALAAPTAITIISDGSGYVSYDMRPHGITFAKPVIVTQRLRNTSVYGTSDAWKAVGAYFPKDPLDLSGILKALETTTTTIFSGGSGSQPEVETWQLRHFSRYMLASG
Ga0307307_101289742	3300028718	Soil	GALAAPTAITIISDGSGYVSYDMRPHGITFAKPVIVTQRLRNTSVYGTSDAWNAVGAYFPKDPLDLSGILKALETTTTTIFNGGSGGKPEVETWQLRHFSRYMLASG
Ga0307282_103952702	3300028784	Soil	FTITFPKGALTTSTWITITSDASGYVSYDMKPHGLRFAKPVIVTQSLKNTAVYKTPVALKAACAYFSKDLLDLSGVLKALEIETTTIYSAPNGSQLVPEVETWQLNHFSHYMLASG
Ga0307310_101246361	3300028824	Soil	ITFPYGALAAPTAITIISDGTGYVSYDMRPHGITFAKPVIVTQRLRNTSVYGTSDAWNAVGAYFPKDPLDLSGILKALETTTTTIFNGGSGGKPEVETWQLRHFSRYMLASG
Ga0307312_104301652	3300028828	Soil	ALAAPTAITIISDGSGYVSYDMRPHGITFAKPVIVTQRLRNTSVYGTSDAWKAVGAYFPQDPLDLSGILKALETTTTTIFSGGSGGQPEIETWQLRHFSRYMLASG
Ga0307304_100433062	3300028885	Soil	VNGGTISIPGSDFTITFPYGALAAPTAITIISDGSGYVSYDMRPHGITFAKPVIVTQRLRNTSVYGTSDAWKAVGAYFPQDPLDLSGILKALETTTTTIFSGGSGGQPEIETWQLRHFSRYMLASG
Ga0307304_103865731	3300028885	Soil	SLAIAGSDFTITFPYGALSAPTAITIISDGSGYVSYDMRPHGITFAKPVIVTQRLRNTSVYGTSDAWKAVGAYFPKDPLDLSGILKALETTTTTIFNGGSGGQPEIETWQLRHFSRYMLASG
Ga0308198_10168071	3300030904	Soil	AIKWAPTHVNQTRSVSATIGYNGGSLALGASDFTITFPKGALTTSTWITITSDASGYVSYDMKPHGLRFAKPVIVTQSLKNTAVYKTPVALKAACAYFSKDLLDLSGVLKALEIETTTIYSAPNGSQLVPEVETWQLNHFSHYMLASG
Ga0308197_104465742	3300031093	Soil	AITIISDGSGYVSYDMRPHGITFAKPVIVTQRLRNTSVYGTSDAWKAVGAYFPKDPLDLSGILKALETTTTTIFSGGSGSQPEVETWQLRHFSRYMLASG
Ga0308188_10229781	3300031097	Soil	SAPTAITIISDGSGYVSYDMRPHGITFAKPVIVTQRLRNTSVYGTSDAWNAVGAYFPKDPLDLSGILKALETTTTTIFNGGSGGKPEVETWQLRHFSRYMLASG
Ga0308191_10111332	3300031098	Soil	GSDFTITFPKGALTTSTWITITSDASGYVSYDMKPHGLRFAKPVIVTQSLKNTAVYKTPVALKAACAYFSKDLLDLSGVLKALEIETTTIYSAPNGSQLVPEVETWQLNHFSHYMLASG
Ga0308187_102673002	3300031114	Soil	AAPTAITIVSDESGYVSYDMQPHGTVFAKPVIVTQRLRNTSVYGTADAWKAVGAYFPKDPLDLSGIIKALETTTTIIFSGGSDGQPEVETWQLRHFSRYMLASG
Ga0308187_102774081	3300031114	Soil	IPGSDFTITFPYGALAAPTAITIISDGSGYVSYDMRPHGITFAKPVIVTQRLRNTSVYGTSDAWKAVGAYFPKDPLDLSGILKALETTTTTIFSGGSGGQPEIETWQLRHFSRYMLASG
Ga0307469_123673112	3300031720	Hardwood Forest Soil	DGGTLQIPGSDFTITFPRGALSQSTFITIVSEDNGYVSYDMQPHGLRFNRPVLVTQSLRNTAVYGTPLALNSYCAYFAKDLLDLGGILQALEIETTTIFSNPYTGKAEVQVWQLNHFSRYMLASD
Ga0310810_104287501	3300033412	Soil	SASIGYNGGSLAIPGSDFTITFPRGALYETTWITITSDASGYVSYDMKPHGLKFAKPVIVTQRLDNTAVYKTPVSLNAFCAYFSTDLLDLSGVLKALEIETTTIFSAPNSGSLVPEVETWQLNHFSRYMLASG
Ga0310810_113533821	3300033412	Soil	ITSDASGYVAYDMQPHGLTFGKPVVVTQRLRNTAVYGTPLALNAFCAYFSKDLLDLSGLLNALEIETTTIFSDPRTGQAEVETWQLNHFSRYMLASN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084875

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences